Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22304.t1 | XP_003610986.1 | 78.5 | 349 | 31 | 4 | 23 | 328 | 41 | 388 | 6.70E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22304.t1 | Q8BU04 | 36.1 | 352 | 174 | 11 | 21 | 328 | 43 | 387 | 2.3e-51 | 204.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22304.t1 | G7K9B9 | 78.5 | 349 | 31 | 4 | 23 | 328 | 41 | 388 | 4.9e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059007 | MS.gene22304 | 0.803764 | 2.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22304.t1 | MTR_5g009240 | 78.448 | 348 | 33 | 4 | 23 | 328 | 41 | 388 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22304.t1 | AT4G23860 | 74.118 | 170 | 36 | 1 | 23 | 184 | 41 | 210 | 1.03e-91 | 281 |
| MS.gene22304.t1 | AT4G23860 | 44.444 | 90 | 39 | 1 | 250 | 328 | 334 | 423 | 1.94e-17 | 83.2 |
| MS.gene22304.t1 | AT4G23860 | 74.118 | 170 | 36 | 1 | 23 | 184 | 41 | 210 | 1.03e-91 | 281 |
| MS.gene22304.t1 | AT4G23860 | 44.444 | 90 | 39 | 1 | 250 | 328 | 334 | 423 | 1.94e-17 | 83.2 |
| MS.gene22304.t1 | AT4G23860 | 74.118 | 170 | 36 | 1 | 23 | 184 | 41 | 210 | 1.03e-91 | 281 |
| MS.gene22304.t1 | AT4G23860 | 44.444 | 90 | 39 | 1 | 250 | 328 | 334 | 423 | 1.94e-17 | 83.2 |
| MS.gene22304.t1 | AT4G23860 | 74.074 | 162 | 34 | 1 | 31 | 184 | 1 | 162 | 4.73e-87 | 267 |
| MS.gene22304.t1 | AT4G23860 | 44.444 | 90 | 39 | 1 | 250 | 328 | 286 | 375 | 1.32e-17 | 83.2 |
Find 80 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTACAATCACAACTTTAA+AGG | 0.150581 | 5.4:+3917705 | MS.gene22304:CDS |
| TAGCAAGGACAAAGGTATTT+TGG | 0.200140 | 5.4:+3918882 | MS.gene22304:CDS |
| TTTCATGTACCCTTTGTTAT+AGG | 0.222177 | 5.4:-3916980 | None:intergenic |
| TCTATTTGTTCTTCAGCATC+TGG | 0.320887 | 5.4:-3917762 | None:intergenic |
| GGTTCTGAATCTATATCTAA+TGG | 0.329862 | 5.4:+3918993 | MS.gene22304:CDS |
| TCATATCTTCAATGCCCTTC+AGG | 0.335145 | 5.4:-3919356 | None:intergenic |
| ATGCAAATGCAAGAATTGTT+TGG | 0.337918 | 5.4:+3919171 | MS.gene22304:CDS |
| ATTATATCCTGAGGTAATAT+TGG | 0.347692 | 5.4:+3918825 | MS.gene22304:CDS |
| GTTCTGAATCTATATCTAAT+GGG | 0.367938 | 5.4:+3918994 | MS.gene22304:CDS |
| ACATTCTCAATATCTTTACT+TGG | 0.382845 | 5.4:-3917675 | None:intergenic |
| AGAAGAAAAGTTACAGCAAC+AGG | 0.389439 | 5.4:+3919279 | MS.gene22304:CDS |
| CCCGTTCCTCAACTTCTTCA+AGG | 0.394586 | 5.4:-3915342 | None:intergenic |
| TGCTCGTTGTCTTGCCATGA+TGG | 0.396475 | 5.4:+3917066 | MS.gene22304:CDS |
| TCAGCATCTGGATCTGGATA+AGG | 0.420206 | 5.4:-3917750 | None:intergenic |
| TTACGAGGATTTCATGTGTA+AGG | 0.420876 | 5.4:+3918774 | MS.gene22304:CDS |
| TGTTCTTCAGCATCTGGATC+TGG | 0.423504 | 5.4:-3917756 | None:intergenic |
| CAAACTCCAGCATTCCCATC+AGG | 0.444490 | 5.4:-3917036 | None:intergenic |
| GGACGCGGTTCGCACTTTCC+TGG | 0.450441 | 5.4:+3919380 | MS.gene22304:CDS |
| TGCATCACCTGCACCCCTGA+TGG | 0.462688 | 5.4:+3917021 | MS.gene22304:CDS |
| TGCACCCCTGATGGGAATGC+TGG | 0.466841 | 5.4:+3917030 | MS.gene22304:CDS |
| ATAACAAAGGGTACATGAAA+AGG | 0.466894 | 5.4:+3916983 | MS.gene22304:CDS |
| CCTTGAAGAAGTTGAGGAAC+GGG | 0.470276 | 5.4:+3915342 | MS.gene22304:CDS |
| CAGCATCTGGATCTGGATAA+GGG | 0.471368 | 5.4:-3917749 | None:intergenic |
| TCGTGCAGATTGTGGAACTA+TGG | 0.474862 | 5.4:+3917586 | MS.gene22304:intron |
| AGCATTCCCATCAGGGGTGC+AGG | 0.484487 | 5.4:-3917028 | None:intergenic |
| GTCTTGCCATGATGGTCATC+AGG | 0.485015 | 5.4:+3917074 | MS.gene22304:CDS |
| AAGACATGCCTTCAACTTGT+GGG | 0.485778 | 5.4:+3918905 | MS.gene22304:CDS |
| GAAGACATGCCTTCAACTTG+TGG | 0.495558 | 5.4:+3918904 | MS.gene22304:CDS |
| TAATGGGGCAGGTCTTCCTC+TGG | 0.500926 | 5.4:+3919010 | MS.gene22304:CDS |
| TGGTTTCATGAAGAGCATCT+TGG | 0.504300 | 5.4:+3917813 | MS.gene22304:CDS |
| TGGGGCAGGTCTTCCTCTGG+TGG | 0.505397 | 5.4:+3919013 | MS.gene22304:CDS |
| TTGTGGGTCTGAAAAGCCAC+TGG | 0.506874 | 5.4:+3918921 | MS.gene22304:CDS |
| CATTCTCAATATCTTTACTT+GGG | 0.507015 | 5.4:-3917674 | None:intergenic |
| GCATCACCTGCACCCCTGAT+GGG | 0.510806 | 5.4:+3917022 | MS.gene22304:CDS |
| CACATGAAATCCTCGTAAAG+TGG | 0.514939 | 5.4:-3918769 | None:intergenic |
| TGCTTCCCCAGGTTTATACA+TGG | 0.516207 | 5.4:+3919109 | MS.gene22304:intron |
| AAGGTACTCGCCGAGCGTAA+CGG | 0.517432 | 5.4:-3915323 | None:intergenic |
| AGAAGTTGAGGAACGGGAGC+TGG | 0.520781 | 5.4:+3915348 | MS.gene22304:CDS |
| ACCTTGAAGAAGTTGAGGAA+CGG | 0.536931 | 5.4:+3915341 | MS.gene22304:CDS |
| AGGGAGTGTACCTATAACAA+AGG | 0.543143 | 5.4:+3916970 | MS.gene22304:intron |
| GAATCTATATCTAATGGGGC+AGG | 0.543789 | 5.4:+3918999 | MS.gene22304:CDS |
| ATCTGGATAAGGGCGCGCAC+AGG | 0.547407 | 5.4:-3917739 | None:intergenic |
| AGTGTTGTTTGTGTGAGGAC+TGG | 0.550628 | 5.4:+3917793 | MS.gene22304:CDS |
| CCAGCCACCAATATTACCTC+AGG | 0.554523 | 5.4:-3918832 | None:intergenic |
| CTCGAGTCTTCTGATGAGGT+TGG | 0.559075 | 5.4:+3917837 | MS.gene22304:CDS |
| TGGAATATTATCATCAGAAG+CGG | 0.559901 | 5.4:+3919191 | MS.gene22304:CDS |
| GAAGGGCATTGAAGATATGA+AGG | 0.561022 | 5.4:+3919359 | MS.gene22304:CDS |
| CTTTCTGAAATTATATCCTG+AGG | 0.564699 | 5.4:+3918816 | MS.gene22304:CDS |
| ATATCCTGAGGTAATATTGG+TGG | 0.568743 | 5.4:+3918828 | MS.gene22304:CDS |
| TGCTACTGCTCAAGTTAGCA+AGG | 0.571725 | 5.4:+3918867 | MS.gene22304:CDS |
| TGGTCTCGAGTCTTCTGATG+AGG | 0.583971 | 5.4:+3917833 | MS.gene22304:CDS |
| CCTGAGGTAATATTGGTGGC+TGG | 0.585409 | 5.4:+3918832 | MS.gene22304:CDS |
| GGGAGTGTACCTATAACAAA+GGG | 0.588151 | 5.4:+3916971 | MS.gene22304:intron |
| AGAAGGTGAGCCACTTTACG+AGG | 0.592706 | 5.4:+3918759 | MS.gene22304:intron |
| GGTGGGCCATCCGTTACGCT+CGG | 0.596901 | 5.4:+3915313 | MS.gene22304:CDS |
| TCTGCGTTTGATGATGAAGA+AGG | 0.601495 | 5.4:+3915292 | None:intergenic |
| GAAACTTCAGATGTGACTGT+GGG | 0.602201 | 5.4:+3917616 | MS.gene22304:CDS |
| AAACTCCAGCATTCCCATCA+GGG | 0.605816 | 5.4:-3917035 | None:intergenic |
| CAAAGGGTACATGAAAAGGC+AGG | 0.607761 | 5.4:+3916987 | MS.gene22304:CDS |
| TACTCGCCGAGCGTAACGGA+TGG | 0.608509 | 5.4:-3915319 | None:intergenic |
| TGACAAGGAGGACTCAATTG+TGG | 0.614397 | 5.4:+3919228 | MS.gene22304:CDS |
| AGAAACTTCAGATGTGACTG+TGG | 0.617440 | 5.4:+3917615 | MS.gene22304:CDS |
| GAGAAAGTCGAGATCCTGAA+GGG | 0.619671 | 5.4:+3919342 | MS.gene22304:intron |
| CATTGAAGATATGAAGGACG+CGG | 0.619847 | 5.4:+3919365 | MS.gene22304:CDS |
| GAACTACCTGATGACCATCA+TGG | 0.620280 | 5.4:-3917080 | None:intergenic |
| TGAGTGGCACAAGATTCTGT+TGG | 0.624112 | 5.4:+3918972 | MS.gene22304:CDS |
| ATAATTCTCCTAAAATTGAG+TGG | 0.627230 | 5.4:+3918956 | MS.gene22304:CDS |
| GCGTTTGATGATGAAGAAGG+TGG | 0.634475 | 5.4:+3915295 | None:intergenic |
| AACTCCAGCATTCCCATCAG+GGG | 0.637076 | 5.4:-3917034 | None:intergenic |
| TTCTGAATCTATATCTAATG+GGG | 0.641231 | 5.4:+3918995 | MS.gene22304:CDS |
| AGAGAAAGTCGAGATCCTGA+AGG | 0.642849 | 5.4:+3919341 | MS.gene22304:intron |
| AGAAAAGTTACAGCAACAGG+AGG | 0.643443 | 5.4:+3919282 | MS.gene22304:CDS |
| GAAAAGTTACAGCAACAGGA+GGG | 0.644096 | 5.4:+3919283 | MS.gene22304:CDS |
| CGAGTACCTTGAAGAAGTTG+AGG | 0.654992 | 5.4:+3915336 | MS.gene22304:CDS |
| GCTCAAGTTAGCAAGGACAA+AGG | 0.672437 | 5.4:+3918874 | MS.gene22304:CDS |
| TGTGGGTCTGAAAAGCCACT+GGG | 0.672800 | 5.4:+3918922 | MS.gene22304:CDS |
| GATACAGTGTTGTTTGTGTG+AGG | 0.674890 | 5.4:+3917788 | MS.gene22304:CDS |
| CGTTTGATGATGAAGAAGGT+GGG | 0.682869 | 5.4:+3915296 | None:intergenic |
| GCTATTACAACTTCCACCAG+AGG | 0.684115 | 5.4:-3919026 | None:intergenic |
| TTATATGAAGTATCACCCAG+TGG | 0.760410 | 5.4:-3918937 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATATATGATTTAAC+TGG | - | chr5.4:3917195-3917214 | None:intergenic | 10.0% |
| !! | ATAAAATATATGATTTAACT+GGG | - | chr5.4:3917194-3917213 | None:intergenic | 10.0% |
| !! | TAGTTTAACTAATTAATTAT+TGG | + | chr5.4:3918433-3918452 | MS.gene22304:intron | 10.0% |
| !!! | CAAATTTTAAAATTTTTACA+CGG | - | chr5.4:3916261-3916280 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTGAAGAAAAAA+TGG | + | chr5.4:3916291-3916310 | MS.gene22304:intron | 10.0% |
| !! | AACATAGATTAGATTAAATT+TGG | + | chr5.4:3918205-3918224 | MS.gene22304:intron | 15.0% |
| !! | AATTAATTATTGGTACAAAA+CGG | + | chr5.4:3918443-3918462 | MS.gene22304:intron | 15.0% |
| !! | ATTGAATAAAAAAAGGAAAA+AGG | - | chr5.4:3916911-3916930 | None:intergenic | 15.0% |
| !! | TAAAATATATGATTTAACTG+GGG | - | chr5.4:3917193-3917212 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr5.4:3915782-3915801 | MS.gene22304:intron | 15.0% |
| !!! | AATCATATATTTTATTTGTG+AGG | + | chr5.4:3917199-3917218 | MS.gene22304:intron | 15.0% |
| !!! | AATGCAATGTTTTTTATTTT+CGG | - | chr5.4:3917950-3917969 | None:intergenic | 15.0% |
| !!! | ATAATCAGGTAATAATATTT+TGG | - | chr5.4:3917496-3917515 | None:intergenic | 15.0% |
| !!! | ATCATATATTTTATTTGTGA+GGG | + | chr5.4:3917200-3917219 | MS.gene22304:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAT+GGG | + | chr5.4:3915848-3915867 | MS.gene22304:intron | 15.0% |
| !!! | TAGTTTTAAAACAAATGTTT+GGG | - | chr5.4:3918415-3918434 | None:intergenic | 15.0% |
| !!! | TATTTTGAGAAAAAGAAAAA+TGG | + | chr5.4:3915847-3915866 | MS.gene22304:intron | 15.0% |
| !!! | TTCTTTTTCTCTAAATTAAT+GGG | - | chr5.4:3916479-3916498 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTCTCTAAATTAA+TGG | - | chr5.4:3916480-3916499 | None:intergenic | 15.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | chr5.4:3915807-3915826 | MS.gene22304:intron | 20.0% |
| !! | AAATGACAATTGAAGATTAT+GGG | - | chr5.4:3918494-3918513 | None:intergenic | 20.0% |
| !! | ATAGCAATATATGATATCTA+AGG | - | chr5.4:3917565-3917584 | None:intergenic | 20.0% |
| !! | GAACTAAAAAATTGTATATG+AGG | - | chr5.4:3918268-3918287 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | chr5.4:3915771-3915790 | MS.gene22304:intron | 20.0% |
| !! | TAAAATAGATTAGAGAAGAT+TGG | - | chr5.4:3917882-3917901 | None:intergenic | 20.0% |
| !! | TAGAGAAAAAGAAAATTGAA+CGG | + | chr5.4:3916486-3916505 | MS.gene22304:intron | 20.0% |
| !! | TGATGTTAAAGATAAAGAAT+AGG | + | chr5.4:3916514-3916533 | MS.gene22304:intron | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | chr5.4:3915770-3915789 | MS.gene22304:intron | 20.0% |
| !!! | AATATTTGGCTATTACTTTT+TGG | + | chr5.4:3915515-3915534 | MS.gene22304:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | + | chr5.4:3915687-3915706 | MS.gene22304:intron | 20.0% |
| !!! | CTAAGTCTTTTTAATAAACT+TGG | + | chr5.4:3919313-3919332 | MS.gene22304:intron | 20.0% |
| !!! | CTAGTTTTAAAACAAATGTT+TGG | - | chr5.4:3918416-3918435 | None:intergenic | 20.0% |
| !!! | GGTTATTTCTTTATAAAAAG+TGG | + | chr5.4:3917263-3917282 | MS.gene22304:intron | 20.0% |
| !!! | GTAATTTGCTTAACAATATT+TGG | + | chr5.4:3915501-3915520 | MS.gene22304:intron | 20.0% |
| !!! | TTTTAAAATTTTTACACGGA+AGG | - | chr5.4:3916257-3916276 | None:intergenic | 20.0% |
| ! | AAATCACAATGGCAAAAATA+AGG | - | chr5.4:3918702-3918721 | None:intergenic | 25.0% |
| ! | AAGAGACAATTATTATGAGA+CGG | + | chr5.4:3915873-3915892 | MS.gene22304:intron | 25.0% |
| ! | AATGACAATTGAAGATTATG+GGG | - | chr5.4:3918493-3918512 | None:intergenic | 25.0% |
| ! | ACATTCTCAATATCTTTACT+TGG | - | chr5.4:3917678-3917697 | None:intergenic | 25.0% |
| ! | ATAACATGTCGAATAAAATC+AGG | - | chr5.4:3917427-3917446 | None:intergenic | 25.0% |
| ! | ATAATTCTCCTAAAATTGAG+TGG | + | chr5.4:3918956-3918975 | MS.gene22304:CDS | 25.0% |
| ! | ATACAAAAATCCCCATAATT+TGG | - | chr5.4:3918293-3918312 | None:intergenic | 25.0% |
| ! | ATATACTCAATTTGCATTTC+TGG | + | chr5.4:3918626-3918645 | MS.gene22304:intron | 25.0% |
| ! | ATCTATTACAGATACATGAT+TGG | - | chr5.4:3918581-3918600 | None:intergenic | 25.0% |
| ! | ATTATATCCTGAGGTAATAT+TGG | + | chr5.4:3918825-3918844 | MS.gene22304:CDS | 25.0% |
| ! | ATTGTTAAGCAAATTACAAC+TGG | - | chr5.4:3915498-3915517 | None:intergenic | 25.0% |
| ! | CAAATATATAAGCTTCATAC+TGG | - | chr5.4:3916322-3916341 | None:intergenic | 25.0% |
| ! | CAATGTTCCTTTCAAAAATT+GGG | + | chr5.4:3919137-3919156 | MS.gene22304:CDS | 25.0% |
| ! | CAGTATAATTAAACACAATC+TGG | - | chr5.4:3917985-3918004 | None:intergenic | 25.0% |
| ! | CATTCTCAATATCTTTACTT+GGG | - | chr5.4:3917677-3917696 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | - | chr5.4:3915739-3915758 | None:intergenic | 25.0% |
| ! | CCTGCAAATTGAATAAAAAA+AGG | - | chr5.4:3916918-3916937 | None:intergenic | 25.0% |
| ! | CTAAAAAATTGTATATGAGG+AGG | - | chr5.4:3918265-3918284 | None:intergenic | 25.0% |
| ! | CTCAGATTATACACTAATAA+AGG | - | chr5.4:3915433-3915452 | None:intergenic | 25.0% |
| ! | GAAATGACAATTGAAGATTA+TGG | - | chr5.4:3918495-3918514 | None:intergenic | 25.0% |
| ! | GTAATAATTGAAGACTATAC+AGG | - | chr5.4:3916723-3916742 | None:intergenic | 25.0% |
| ! | TAACATGTCGAATAAAATCA+GGG | - | chr5.4:3917426-3917445 | None:intergenic | 25.0% |
| ! | TACAAAAATCCCCATAATTT+GGG | - | chr5.4:3918292-3918311 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr5.4:3915740-3915759 | None:intergenic | 25.0% |
| ! | TGTTGCAATTGAAAAGATAT+AGG | - | chr5.4:3916650-3916669 | None:intergenic | 25.0% |
| ! | TTCTGAATCTATATCTAATG+GGG | + | chr5.4:3918995-3919014 | MS.gene22304:CDS | 25.0% |
| ! | TTTATTACGTTACTGTTGAA+TGG | + | chr5.4:3916613-3916632 | MS.gene22304:intron | 25.0% |
| !! | AAACAAACAACCATCATTTT+TGG | - | chr5.4:3918537-3918556 | None:intergenic | 25.0% |
| !! | CTCTAAAAAATAGTCGTTTA+AGG | + | chr5.4:3915639-3915658 | MS.gene22304:intron | 25.0% |
| !! | GTTCTGAATCTATATCTAAT+GGG | + | chr5.4:3918994-3919013 | MS.gene22304:CDS | 25.0% |
| !!! | AAACGACTATTTTTTAGAGA+CGG | - | chr5.4:3915638-3915657 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTATTCAATTTGC+AGG | + | chr5.4:3916915-3916934 | MS.gene22304:intron | 25.0% |
| !!! | GTCACTTTTTAACTATTAAC+TGG | + | chr5.4:3917300-3917319 | MS.gene22304:intron | 25.0% |
| !!! | TGTATCGATTTAAATGAGTT+AGG | - | chr5.4:3916196-3916215 | None:intergenic | 25.0% |
| AAAGAGTTCTCCAAAAATGA+TGG | + | chr5.4:3918524-3918543 | MS.gene22304:intron | 30.0% | |
| AAAGTTACTAAGGCTATGTT+TGG | + | chr5.4:3918039-3918058 | MS.gene22304:intron | 30.0% | |
| AACTTTCGATAGTGTATCTT+GGG | + | chr5.4:3917331-3917350 | MS.gene22304:intron | 30.0% | |
| AAGTTACTAAGGCTATGTTT+GGG | + | chr5.4:3918040-3918059 | MS.gene22304:intron | 30.0% | |
| AATCTACAACGGAATACTAT+AGG | - | chr5.4:3917363-3917382 | None:intergenic | 30.0% | |
| AATTTGATGTTGTCCTAGAT+TGG | + | chr5.4:3916224-3916243 | MS.gene22304:intron | 30.0% | |
| ACAAAAATCCCCATAATTTG+GGG | - | chr5.4:3918291-3918310 | None:intergenic | 30.0% | |
| AGGATGATAGAAAATCACAA+TGG | - | chr5.4:3918713-3918732 | None:intergenic | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | + | chr5.4:3915659-3915678 | MS.gene22304:intron | 30.0% | |
| AGTGATAAATATGTAACAGC+TGG | - | chr5.4:3918679-3918698 | None:intergenic | 30.0% | |
| ATAAGCCATCAAAATCAAAC+TGG | - | chr5.4:3917523-3917542 | None:intergenic | 30.0% | |
| ATCAAACTGGGTTTATAATC+AGG | - | chr5.4:3917510-3917529 | None:intergenic | 30.0% | |
| ATGCAAATGCAAGAATTGTT+TGG | + | chr5.4:3919171-3919190 | MS.gene22304:CDS | 30.0% | |
| ATTCGACATGTTATTGTGAT+GGG | + | chr5.4:3917433-3917452 | MS.gene22304:intron | 30.0% | |
| CATGTCATATATTAAGTGCA+AGG | - | chr5.4:3917388-3917407 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | + | chr5.4:3915736-3915755 | MS.gene22304:intron | 30.0% | |
| GCAATGTTCCTTTCAAAAAT+TGG | + | chr5.4:3919136-3919155 | MS.gene22304:CDS | 30.0% | |
| TAACTTTCGATAGTGTATCT+TGG | + | chr5.4:3917330-3917349 | MS.gene22304:intron | 30.0% | |
| TAAGCCATCAAAATCAAACT+GGG | - | chr5.4:3917522-3917541 | None:intergenic | 30.0% | |
| TAGTAACTTTCAGAGATTTG+TGG | - | chr5.4:3918029-3918048 | None:intergenic | 30.0% | |
| TATAAGGAACCATTGTAATC+TGG | + | chr5.4:3916867-3916886 | MS.gene22304:intron | 30.0% | |
| TATTCGACATGTTATTGTGA+TGG | + | chr5.4:3917432-3917451 | MS.gene22304:intron | 30.0% | |
| TCGTACAATCACAACTTTAA+AGG | + | chr5.4:3917705-3917724 | MS.gene22304:CDS | 30.0% | |
| TGGAAAGAAAATAGAGCTTT+GGG | - | chr5.4:3918350-3918369 | None:intergenic | 30.0% | |
| TGGAATATTATCATCAGAAG+CGG | + | chr5.4:3919191-3919210 | MS.gene22304:CDS | 30.0% | |
| ! | ATAACAAAGGGTACATGAAA+AGG | + | chr5.4:3916983-3917002 | MS.gene22304:CDS | 30.0% |
| ! | CAAATCTCTGAAAGTTACTA+AGG | + | chr5.4:3918029-3918048 | MS.gene22304:intron | 30.0% |
| ! | TAAATGAGTTAGGTGTTGTA+TGG | - | chr5.4:3916186-3916205 | None:intergenic | 30.0% |
| ! | TTTCATGTACCCTTTGTTAT+AGG | - | chr5.4:3916983-3917002 | None:intergenic | 30.0% |
| !! | AATCATTTTTATCGCTGCTA+CGG | + | chr5.4:3916564-3916583 | MS.gene22304:intron | 30.0% |
| !! | AATTTGCATTTCTGGTATGA+TGG | + | chr5.4:3918634-3918653 | MS.gene22304:intron | 30.0% |
| !! | CTTTCTGAAATTATATCCTG+AGG | + | chr5.4:3918816-3918835 | MS.gene22304:CDS | 30.0% |
| !! | GGTTCTGAATCTATATCTAA+TGG | + | chr5.4:3918993-3919012 | MS.gene22304:CDS | 30.0% |
| !! | TAAACCCAGTTTGATTTTGA+TGG | + | chr5.4:3917515-3917534 | MS.gene22304:intron | 30.0% |
| !!! | TTTTAGTTCCCCCAAATTAT+GGG | + | chr5.4:3918279-3918298 | MS.gene22304:intron | 30.0% |
| !!! | TTTTTAGTTCCCCCAAATTA+TGG | + | chr5.4:3918278-3918297 | MS.gene22304:intron | 30.0% |
| AAAAGCAAACACTGATACAC+CGG | - | chr5.4:3917140-3917159 | None:intergenic | 35.0% | |
| AAAAGGGAAACTTAGCTTCT+AGG | - | chr5.4:3915606-3915625 | None:intergenic | 35.0% | |
| AAGTGTATGCCAGATTACAA+TGG | - | chr5.4:3916879-3916898 | None:intergenic | 35.0% | |
| ACAGATAAGTACCATGTGAT+GGG | + | chr5.4:3916001-3916020 | MS.gene22304:intron | 35.0% | |
| AGAACTTCGGATTGAATTAC+CGG | + | chr5.4:3917118-3917137 | MS.gene22304:intron | 35.0% | |
| AGAAGAAAAGTTACAGCAAC+AGG | + | chr5.4:3919279-3919298 | MS.gene22304:CDS | 35.0% | |
| AGACAATTATTATGAGACGG+AGG | + | chr5.4:3915876-3915895 | MS.gene22304:intron | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr5.4:3915750-3915769 | MS.gene22304:intron | 35.0% | |
| ATATCCTGAGGTAATATTGG+TGG | + | chr5.4:3918828-3918847 | MS.gene22304:CDS | 35.0% | |
| ATTGTATATGAGGAGGAGTT+TGG | - | chr5.4:3918258-3918277 | None:intergenic | 35.0% | |
| CAAAAATCCCCATAATTTGG+GGG | - | chr5.4:3918290-3918309 | None:intergenic | 35.0% | |
| CAATGGTTCCTTATAAAGCT+AGG | - | chr5.4:3916862-3916881 | None:intergenic | 35.0% | |
| CTTTACCATGTATAAACCTG+GGG | - | chr5.4:3919117-3919136 | None:intergenic | 35.0% | |
| GACAATTATTATGAGACGGA+GGG | + | chr5.4:3915877-3915896 | MS.gene22304:intron | 35.0% | |
| GCTTTACCATGTATAAACCT+GGG | - | chr5.4:3919118-3919137 | None:intergenic | 35.0% | |
| GTGGAAAGAAAATAGAGCTT+TGG | - | chr5.4:3918351-3918370 | None:intergenic | 35.0% | |
| TAATCTGAGTCTCGTAGATT+CGG | + | chr5.4:3915444-3915463 | MS.gene22304:intron | 35.0% | |
| TACAGATAAGTACCATGTGA+TGG | + | chr5.4:3916000-3916019 | MS.gene22304:intron | 35.0% | |
| TAGAACTGTAGCATTACTTG+TGG | + | chr5.4:3915406-3915425 | MS.gene22304:intron | 35.0% | |
| TATGTTCAAAATGCACTTGC+AGG | - | chr5.4:3916418-3916437 | None:intergenic | 35.0% | |
| TCTATTTGTTCTTCAGCATC+TGG | - | chr5.4:3917765-3917784 | None:intergenic | 35.0% | |
| TGCTTTACCATGTATAAACC+TGG | - | chr5.4:3919119-3919138 | None:intergenic | 35.0% | |
| TTACGAGGATTTCATGTGTA+AGG | + | chr5.4:3918774-3918793 | MS.gene22304:CDS | 35.0% | |
| TTGCATGTTAATTGTCTCCT+TGG | + | chr5.4:3919071-3919090 | MS.gene22304:intron | 35.0% | |
| ! | ACAAATGTTTGGGAGTTTTG+AGG | - | chr5.4:3918405-3918424 | None:intergenic | 35.0% |
| ! | CATCTCTCCCAATTTTTGAA+AGG | - | chr5.4:3919147-3919166 | None:intergenic | 35.0% |
| ! | TTATATGAAGTATCACCCAG+TGG | - | chr5.4:3918940-3918959 | None:intergenic | 35.0% |
| ! | TTTAGTTCCCCCAAATTATG+GGG | + | chr5.4:3918280-3918299 | MS.gene22304:intron | 35.0% |
| ! | TTTGGAGAACTCTTTTCGAA+GGG | - | chr5.4:3918519-3918538 | None:intergenic | 35.0% |
| !! | AAAGAAAATAGAGCTTTGGG+AGG | - | chr5.4:3918347-3918366 | None:intergenic | 35.0% |
| !! | AAGAAAATAGAGCTTTGGGA+GGG | - | chr5.4:3918346-3918365 | None:intergenic | 35.0% |
| !! | ATCTTGTGCCACTCAATTTT+AGG | - | chr5.4:3918967-3918986 | None:intergenic | 35.0% |
| !! | ATTGTTATCAAGCTTGCTAC+TGG | - | chr5.4:3918608-3918627 | None:intergenic | 35.0% |
| !! | CAAATGTTTGGGAGTTTTGA+GGG | - | chr5.4:3918404-3918423 | None:intergenic | 35.0% |
| !! | GATTGCTTTTCTACTTGACA+AGG | + | chr5.4:3919213-3919232 | MS.gene22304:CDS | 35.0% |
| !! | GGCTGTTCTGAAAAGAATTT+AGG | + | chr5.4:3917242-3917261 | MS.gene22304:intron | 35.0% |
| !! | TTCCTTTGACTCTAGAACTT+CGG | + | chr5.4:3917105-3917124 | MS.gene22304:intron | 35.0% |
| !! | TTTTGGAGAACTCTTTTCGA+AGG | - | chr5.4:3918520-3918539 | None:intergenic | 35.0% |
| !!! | AAATGTTTGGGAGTTTTGAG+GGG | - | chr5.4:3918403-3918422 | None:intergenic | 35.0% |
| !!! | AGGAAGCTGATTTAGTTTTG+GGG | + | chr5.4:3916935-3916954 | MS.gene22304:intron | 35.0% |
| !!! | CAGGAAGCTGATTTAGTTTT+GGG | + | chr5.4:3916934-3916953 | MS.gene22304:intron | 35.0% |
| !!! | GACTATTTTTTAGAGACGGA+GGG | - | chr5.4:3915634-3915653 | None:intergenic | 35.0% |
| !!! | TAGCAAGGACAAAGGTATTT+TGG | + | chr5.4:3918882-3918901 | MS.gene22304:CDS | 35.0% |
| AAGACATGCCTTCAACTTGT+GGG | + | chr5.4:3918905-3918924 | MS.gene22304:CDS | 40.0% | |
| ACAACTGGTCAATTGAAGCT+CGG | - | chr5.4:3915483-3915502 | None:intergenic | 40.0% | |
| ACCTTGAAGAAGTTGAGGAA+CGG | + | chr5.4:3915341-3915360 | MS.gene22304:CDS | 40.0% | |
| AGAAACTTCAGATGTGACTG+TGG | + | chr5.4:3917615-3917634 | MS.gene22304:CDS | 40.0% | |
| AGGGCTTGTAAAAAAGGAAG+TGG | - | chr5.4:3918370-3918389 | None:intergenic | 40.0% | |
| AGTGCAAGGCAAATCTACAA+CGG | - | chr5.4:3917374-3917393 | None:intergenic | 40.0% | |
| CACATGAAATCCTCGTAAAG+TGG | - | chr5.4:3918772-3918791 | None:intergenic | 40.0% | |
| CATTGAAGATATGAAGGACG+CGG | + | chr5.4:3919365-3919384 | MS.gene22304:CDS | 40.0% | |
| GAAACACACACATAACAGAG+TGG | - | chr5.4:3916360-3916379 | None:intergenic | 40.0% | |
| GAAACTTCAGATGTGACTGT+GGG | + | chr5.4:3917616-3917635 | MS.gene22304:CDS | 40.0% | |
| GAATCTATATCTAATGGGGC+AGG | + | chr5.4:3918999-3919018 | MS.gene22304:CDS | 40.0% | |
| GTAAAGATCCCTTGGTGAAA+TGG | - | chr5.4:3916080-3916099 | None:intergenic | 40.0% | |
| TAAGGCTATGTTTGGGAGTT+TGG | + | chr5.4:3918047-3918066 | MS.gene22304:intron | 40.0% | |
| TATATGAGGAGGAGTTTGGA+GGG | - | chr5.4:3918254-3918273 | None:intergenic | 40.0% | |
| TATGACATGTAATCTGTGCC+TGG | + | chr5.4:3917399-3917418 | MS.gene22304:intron | 40.0% | |
| TATGTTTGGGAGTTTGGAGA+GGG | + | chr5.4:3918053-3918072 | MS.gene22304:intron | 40.0% | |
| TCATATCTTCAATGCCCTTC+AGG | - | chr5.4:3919359-3919378 | None:intergenic | 40.0% | |
| TGGGGCAAGACACAAATAAA+AGG | - | chr5.4:3918475-3918494 | None:intergenic | 40.0% | |
| ! | AGGGAGTGTACCTATAACAA+AGG | + | chr5.4:3916970-3916989 | MS.gene22304:intron | 40.0% |
| ! | ATAGCAGTATAGCACTGAAG+CGG | + | chr5.4:3919044-3919063 | MS.gene22304:intron | 40.0% |
| ! | GGAAGGTATGAAACCAATCT+AGG | - | chr5.4:3916240-3916259 | None:intergenic | 40.0% |
| ! | GGGAGTGTACCTATAACAAA+GGG | + | chr5.4:3916971-3916990 | MS.gene22304:intron | 40.0% |
| ! | GTCTCGTAGATTCGGTAAAT+TGG | + | chr5.4:3915452-3915471 | MS.gene22304:intron | 40.0% |
| ! | TGCTTTTCTACTTGACAAGG+AGG | + | chr5.4:3919216-3919235 | MS.gene22304:CDS | 40.0% |
| !! | AGCTCAAAGGAGTATTCTCT+GGG | - | chr5.4:3915962-3915981 | None:intergenic | 40.0% |
| !! | ATCCGAAGTTCTAGAGTCAA+AGG | - | chr5.4:3917110-3917129 | None:intergenic | 40.0% |
| !! | GAAGGGCATTGAAGATATGA+AGG | + | chr5.4:3919359-3919378 | MS.gene22304:CDS | 40.0% |
| !! | GATACAGTGTTGTTTGTGTG+AGG | + | chr5.4:3917788-3917807 | MS.gene22304:CDS | 40.0% |
| !! | GCAGGAAGCTGATTTAGTTT+TGG | + | chr5.4:3916933-3916952 | MS.gene22304:intron | 40.0% |
| !! | GTCGAGATCCTAGCTTTATA+AGG | + | chr5.4:3916851-3916870 | MS.gene22304:intron | 40.0% |
| !! | TGGTTTCATGAAGAGCATCT+TGG | + | chr5.4:3917813-3917832 | MS.gene22304:CDS | 40.0% |
| !! | TTTTCAGACCCACAAGTTGA+AGG | - | chr5.4:3918916-3918935 | None:intergenic | 40.0% |
| !!! | CGACTATTTTTTAGAGACGG+AGG | - | chr5.4:3915635-3915654 | None:intergenic | 40.0% |
| !!! | GAAGCTGATTTAGTTTTGGG+GGG | + | chr5.4:3916937-3916956 | MS.gene22304:intron | 40.0% |
| !!! | GGAAGCTGATTTAGTTTTGG+GGG | + | chr5.4:3916936-3916955 | MS.gene22304:intron | 40.0% |
| AAAAGACTTAGCTCAGCACC+AGG | - | chr5.4:3919304-3919323 | None:intergenic | 45.0% | |
| AAACTCCAGCATTCCCATCA+GGG | - | chr5.4:3917038-3917057 | None:intergenic | 45.0% | |
| AAGCAAAGTGCAGATGACGA+AGG | - | chr5.4:3916812-3916831 | None:intergenic | 45.0% | |
| AGAGAAAGTCGAGATCCTGA+AGG | + | chr5.4:3919341-3919360 | MS.gene22304:intron | 45.0% | |
| AGCAAAGTGCAGATGACGAA+GGG | - | chr5.4:3916811-3916830 | None:intergenic | 45.0% | |
| CAAGGGATCTTTACCCTAGT+CGG | + | chr5.4:3916086-3916105 | MS.gene22304:intron | 45.0% | |
| CAGAGAATACTCCTTTGAGC+TGG | + | chr5.4:3915961-3915980 | MS.gene22304:intron | 45.0% | |
| CAGCAACAATGTTCACACCA+AGG | - | chr5.4:3919091-3919110 | None:intergenic | 45.0% | |
| CAGCATCTGGATCTGGATAA+GGG | - | chr5.4:3917752-3917771 | None:intergenic | 45.0% | |
| CCTTGAAGAAGTTGAGGAAC+GGG | + | chr5.4:3915342-3915361 | MS.gene22304:CDS | 45.0% | |
| CGAGTACCTTGAAGAAGTTG+AGG | + | chr5.4:3915336-3915355 | MS.gene22304:CDS | 45.0% | |
| CTATGTTTGGGAGTTTGGAG+AGG | + | chr5.4:3918052-3918071 | MS.gene22304:intron | 45.0% | |
| GAACTACCTGATGACCATCA+TGG | - | chr5.4:3917083-3917102 | None:intergenic | 45.0% | |
| GAAGACATGCCTTCAACTTG+TGG | + | chr5.4:3918904-3918923 | MS.gene22304:CDS | 45.0% | |
| GAGAAAGTCGAGATCCTGAA+GGG | + | chr5.4:3919342-3919361 | MS.gene22304:intron | 45.0% | |
| GCTATTACAACTTCCACCAG+AGG | - | chr5.4:3919029-3919048 | None:intergenic | 45.0% | |
| GCTCAAGTTAGCAAGGACAA+AGG | + | chr5.4:3918874-3918893 | MS.gene22304:CDS | 45.0% | |
| GTATATGAGGAGGAGTTTGG+AGG | - | chr5.4:3918255-3918274 | None:intergenic | 45.0% | |
| GTCGAATAAAATCAGGGACC+AGG | - | chr5.4:3917420-3917439 | None:intergenic | 45.0% | |
| GTTGTATGGTACCTCAGCAA+CGG | - | chr5.4:3916172-3916191 | None:intergenic | 45.0% | |
| TAGGGGAGGGCTTGTAAAAA+AGG | - | chr5.4:3918376-3918395 | None:intergenic | 45.0% | |
| TCAGATTCCCAGAGATGAGA+AGG | + | chr5.4:3918742-3918761 | MS.gene22304:intron | 45.0% | |
| TCAGCATCTGGATCTGGATA+AGG | - | chr5.4:3917753-3917772 | None:intergenic | 45.0% | |
| TCCGGGTTTCATGAGTTTCT+GGG | + | chr5.4:3915910-3915929 | MS.gene22304:intron | 45.0% | |
| TCGTGCAGATTGTGGAACTA+TGG | + | chr5.4:3917586-3917605 | MS.gene22304:intron | 45.0% | |
| TCTACACACACTCACCTAAC+CGG | - | chr5.4:3915568-3915587 | None:intergenic | 45.0% | |
| TGACAAGGAGGACTCAATTG+TGG | + | chr5.4:3919228-3919247 | MS.gene22304:CDS | 45.0% | |
| TGAGTGGCACAAGATTCTGT+TGG | + | chr5.4:3918972-3918991 | MS.gene22304:CDS | 45.0% | |
| TGCTACTGCTCAAGTTAGCA+AGG | + | chr5.4:3918867-3918886 | MS.gene22304:CDS | 45.0% | |
| TGCTTCCCCAGGTTTATACA+TGG | + | chr5.4:3919109-3919128 | MS.gene22304:intron | 45.0% | |
| TGTTCTTCAGCATCTGGATC+TGG | - | chr5.4:3917759-3917778 | None:intergenic | 45.0% | |
| TTGCTATGTCGTGCAGATTG+TGG | + | chr5.4:3917578-3917597 | MS.gene22304:intron | 45.0% | |
| ! | AAAACCCTAGGAGTGTGTTC+TGG | - | chr5.4:3915542-3915561 | None:intergenic | 45.0% |
| ! | AGAGACGGAGGGAGTATAAA+AGG | - | chr5.4:3915623-3915642 | None:intergenic | 45.0% |
| ! | CAAAGGGTACATGAAAAGGC+AGG | + | chr5.4:3916987-3917006 | MS.gene22304:CDS | 45.0% |
| ! | GAGACGGAGGGAGTATAAAA+GGG | - | chr5.4:3915622-3915641 | None:intergenic | 45.0% |
| ! | TGGGAATCTGAAGCATAGCA+AGG | - | chr5.4:3918733-3918752 | None:intergenic | 45.0% |
| ! | TGGGACTGATTGACTTTGTC+TGG | + | chr5.4:3917452-3917471 | MS.gene22304:intron | 45.0% |
| !! | AAATAGAGCTTTGGGAGGGA+AGG | - | chr5.4:3918342-3918361 | None:intergenic | 45.0% |
| !! | AAGTACCATGTGATGGGTGA+GGG | + | chr5.4:3916007-3916026 | MS.gene22304:intron | 45.0% |
| !! | AGTGTTGTTTGTGTGAGGAC+TGG | + | chr5.4:3917793-3917812 | MS.gene22304:CDS | 45.0% |
| !! | CAGCTCAAAGGAGTATTCTC+TGG | - | chr5.4:3915963-3915982 | None:intergenic | 45.0% |
| !! | TAAGTACCATGTGATGGGTG+AGG | + | chr5.4:3916006-3916025 | MS.gene22304:intron | 45.0% |
| AAATGGCCGAACCTAGACCA+GGG | - | chr5.4:3916063-3916082 | None:intergenic | 50.0% | |
| AACTCCAGCATTCCCATCAG+GGG | - | chr5.4:3917037-3917056 | None:intergenic | 50.0% | |
| AGGTTCGGCCATTTCACCAA+GGG | + | chr5.4:3916069-3916088 | MS.gene22304:intron | 50.0% | |
| ATGCGCCCCATATGGATTTG+AGG | - | chr5.4:3915937-3915956 | None:intergenic | 50.0% | |
| CAAACTCCAGCATTCCCATC+AGG | - | chr5.4:3917039-3917058 | None:intergenic | 50.0% | |
| CAGCAACGGTACTCTGTCTA+TGG | - | chr5.4:3916158-3916177 | None:intergenic | 50.0% | |
| CCAGCCACCAATATTACCTC+AGG | - | chr5.4:3918835-3918854 | None:intergenic | 50.0% | |
| CCCGTTCCTCAACTTCTTCA+AGG | - | chr5.4:3915345-3915364 | None:intergenic | 50.0% | |
| CCTTTGAGCTGGCGATGATT+GGG | + | chr5.4:3915972-3915991 | MS.gene22304:intron | 50.0% | |
| CGACTAGGGTAAAGATCCCT+TGG | - | chr5.4:3916088-3916107 | None:intergenic | 50.0% | |
| CTACACACACTCACCTAACC+GGG | - | chr5.4:3915567-3915586 | None:intergenic | 50.0% | |
| CTCCGGGTTTCATGAGTTTC+TGG | + | chr5.4:3915909-3915928 | MS.gene22304:intron | 50.0% | |
| CTCGAGTCTTCTGATGAGGT+TGG | + | chr5.4:3917837-3917856 | MS.gene22304:CDS | 50.0% | |
| CTCTCAGAATGAGGTCAAGC+AGG | - | chr5.4:3916112-3916131 | None:intergenic | 50.0% | |
| CTGGGCCCTCAAATCCATAT+GGG | + | chr5.4:3915928-3915947 | MS.gene22304:intron | 50.0% | |
| GAGTTTGGAGAGGGAATGGA+GGG | + | chr5.4:3918062-3918081 | MS.gene22304:intron | 50.0% | |
| GCAAAGTGCAGATGACGAAG+GGG | - | chr5.4:3916810-3916829 | None:intergenic | 50.0% | |
| GCCCAGAAACTCATGAAACC+CGG | - | chr5.4:3915914-3915933 | None:intergenic | 50.0% | |
| GTCTTGCCATGATGGTCATC+AGG | + | chr5.4:3917074-3917093 | MS.gene22304:CDS | 50.0% | |
| TACACACACTCACCTAACCG+GGG | - | chr5.4:3915566-3915585 | None:intergenic | 50.0% | |
| TAGGTTCGGCCATTTCACCA+AGG | + | chr5.4:3916068-3916087 | MS.gene22304:intron | 50.0% | |
| TCCTTTGAGCTGGCGATGAT+TGG | + | chr5.4:3915971-3915990 | MS.gene22304:intron | 50.0% | |
| TCTGGGCCCTCAAATCCATA+TGG | + | chr5.4:3915927-3915946 | MS.gene22304:intron | 50.0% | |
| TGCGCCCCATATGGATTTGA+GGG | - | chr5.4:3915936-3915955 | None:intergenic | 50.0% | |
| TGCTCGTTGTCTTGCCATGA+TGG | + | chr5.4:3917066-3917085 | MS.gene22304:CDS | 50.0% | |
| TGGCTCACCTTCTCATCTCT+GGG | - | chr5.4:3918752-3918771 | None:intergenic | 50.0% | |
| TGGGCCCTCAAATCCATATG+GGG | + | chr5.4:3915929-3915948 | MS.gene22304:intron | 50.0% | |
| TGGTCCAGAACACACTCCTA+GGG | + | chr5.4:3915535-3915554 | MS.gene22304:intron | 50.0% | |
| TGGTCTCGAGTCTTCTGATG+AGG | + | chr5.4:3917833-3917852 | MS.gene22304:CDS | 50.0% | |
| TGTGGGTCTGAAAAGCCACT+GGG | + | chr5.4:3918922-3918941 | MS.gene22304:CDS | 50.0% | |
| TTGGGAGTTTGGAGAGGGAA+TGG | + | chr5.4:3918058-3918077 | MS.gene22304:intron | 50.0% | |
| TTGGTCCAGAACACACTCCT+AGG | + | chr5.4:3915534-3915553 | MS.gene22304:intron | 50.0% | |
| TTGTGGGTCTGAAAAGCCAC+TGG | + | chr5.4:3918921-3918940 | MS.gene22304:CDS | 50.0% | |
| TTTGTGAGGGACAGTGTCAG+TGG | + | chr5.4:3917213-3917232 | MS.gene22304:intron | 50.0% | |
| ! | AACATTGTTGCTGCTTCCCC+AGG | + | chr5.4:3919098-3919117 | MS.gene22304:intron | 50.0% |
| ! | ACACTCCTAGGGTTTTTCCC+CGG | + | chr5.4:3915546-3915565 | MS.gene22304:intron | 50.0% |
| ! | AGAAGGTGAGCCACTTTACG+AGG | + | chr5.4:3918759-3918778 | MS.gene22304:intron | 50.0% |
| ! | AGGAGTTTGGAGGGTTTTGC+AGG | - | chr5.4:3918245-3918264 | None:intergenic | 50.0% |
| ! | CCTGAGGTAATATTGGTGGC+TGG | + | chr5.4:3918832-3918851 | MS.gene22304:CDS | 50.0% |
| ! | CTTTGGGAGGGAAGGCTTTA+GGG | - | chr5.4:3918334-3918353 | None:intergenic | 50.0% |
| ! | GGAGTTTGGAGGGTTTTGCA+GGG | - | chr5.4:3918244-3918263 | None:intergenic | 50.0% |
| ! | GTGTTGTGTACTGGTCTGGT+TGG | + | chr5.4:3916029-3916048 | MS.gene22304:intron | 50.0% |
| ! | TGGAGGGTTTTGCAGGGTTT+GGG | - | chr5.4:3918238-3918257 | None:intergenic | 50.0% |
| ! | TGTGTACTGGTCTGGTTGGT+CGG | + | chr5.4:3916033-3916052 | MS.gene22304:intron | 50.0% |
| ! | TTGGAGGGTTTTGCAGGGTT+TGG | - | chr5.4:3918239-3918258 | None:intergenic | 50.0% |
| ! | TTTGGGAGGGAAGGCTTTAG+GGG | - | chr5.4:3918333-3918352 | None:intergenic | 50.0% |
| !! | ACGGAGGGAGTATTGTTCTC+CGG | + | chr5.4:3915892-3915911 | MS.gene22304:intron | 50.0% |
| !! | TAGACAGAGTACCGTTGCTG+AGG | + | chr5.4:3916158-3916177 | MS.gene22304:intron | 50.0% |
| !!! | GTTTGGGAGTTTTGAGGGGA+GGG | - | chr5.4:3918399-3918418 | None:intergenic | 50.0% |
| !!! | TGTTTGGGAGTTTTGAGGGG+AGG | - | chr5.4:3918400-3918419 | None:intergenic | 50.0% |
| !!! | TTAGTTTTGGGGGGCGATGA+AGG | + | chr5.4:3916946-3916965 | MS.gene22304:intron | 50.0% |
| AATGGAGGGAGGGTTTCGGA+GGG | + | chr5.4:3918076-3918095 | MS.gene22304:intron | 55.0% | |
| AATGGCCGAACCTAGACCAG+GGG | - | chr5.4:3916062-3916081 | None:intergenic | 55.0% | |
| AGAAGTTGAGGAACGGGAGC+TGG | + | chr5.4:3915348-3915367 | MS.gene22304:CDS | 55.0% | |
| AGGGAATGGAGGGAGGGTTT+CGG | + | chr5.4:3918072-3918091 | MS.gene22304:intron | 55.0% | |
| CAACACCCTCACCCATCACA+TGG | - | chr5.4:3916015-3916034 | None:intergenic | 55.0% | |
| CCCAATCATCGCCAGCTCAA+AGG | - | chr5.4:3915975-3915994 | None:intergenic | 55.0% | |
| CCTAACCGGGGAAAAACCCT+AGG | - | chr5.4:3915554-3915573 | None:intergenic | 55.0% | |
| GAAATGGCCGAACCTAGACC+AGG | - | chr5.4:3916064-3916083 | None:intergenic | 55.0% | |
| GATGGGGGTCTCTCAGAATG+AGG | - | chr5.4:3916121-3916140 | None:intergenic | 55.0% | |
| GGAGTTTGGAGAGGGAATGG+AGG | + | chr5.4:3918061-3918080 | MS.gene22304:intron | 55.0% | |
| GTACTCTGTCTATGGACGCC+AGG | - | chr5.4:3916150-3916169 | None:intergenic | 55.0% | |
| GTGGCTCACCTTCTCATCTC+TGG | - | chr5.4:3918753-3918772 | None:intergenic | 55.0% | |
| TAATGGGGCAGGTCTTCCTC+TGG | + | chr5.4:3919010-3919029 | MS.gene22304:CDS | 55.0% | |
| TTGGAGAGGGAATGGAGGGA+GGG | + | chr5.4:3918066-3918085 | MS.gene22304:intron | 55.0% | |
| TTTGGAGAGGGAATGGAGGG+AGG | + | chr5.4:3918065-3918084 | MS.gene22304:intron | 55.0% | |
| ! | AAGGTACTCGCCGAGCGTAA+CGG | - | chr5.4:3915326-3915345 | None:intergenic | 55.0% |
| ! | CCTAGGGTTTTTCCCCGGTT+AGG | + | chr5.4:3915551-3915570 | MS.gene22304:intron | 55.0% |
| ! | GTGTACTGGTCTGGTTGGTC+GGG | + | chr5.4:3916034-3916053 | MS.gene22304:intron | 55.0% |
| !! | CGGAGGGAGTATTGTTCTCC+GGG | + | chr5.4:3915893-3915912 | MS.gene22304:intron | 55.0% |
| !! | GAGGGTGTTGTGTACTGGTC+TGG | + | chr5.4:3916025-3916044 | MS.gene22304:intron | 55.0% |
| !! | GCTTTGGGAGGGAAGGCTTT+AGG | - | chr5.4:3918335-3918354 | None:intergenic | 55.0% |
| !! | TGGGTGAGGGTGTTGTGTAC+TGG | + | chr5.4:3916020-3916039 | MS.gene22304:intron | 55.0% |
| !! | TTGGGAGGGAAGGCTTTAGG+GGG | - | chr5.4:3918332-3918351 | None:intergenic | 55.0% |
| !!! | GAGTTTTGAGGGGAGGGTAG+GGG | - | chr5.4:3918393-3918412 | None:intergenic | 55.0% |
| !!! | GGAGTTTTGAGGGGAGGGTA+GGG | - | chr5.4:3918394-3918413 | None:intergenic | 55.0% |
| ATGGCCGAACCTAGACCAGG+GGG | - | chr5.4:3916061-3916080 | None:intergenic | 60.0% | |
| GAATGGAGGGAGGGTTTCGG+AGG | + | chr5.4:3918075-3918094 | MS.gene22304:intron | 60.0% | |
| GAGGTCAAGCAGGCCGACTA+GGG | - | chr5.4:3916102-3916121 | None:intergenic | 60.0% | |
| GCATCACCTGCACCCCTGAT+GGG | + | chr5.4:3917022-3917041 | MS.gene22304:CDS | 60.0% | |
| GTGAGGGACAGTGTCAGTGG+CGG | + | chr5.4:3917216-3917235 | MS.gene22304:intron | 60.0% | |
| TCTGAGAGACCCCCATCCCT+GGG | + | chr5.4:3916124-3916143 | MS.gene22304:intron | 60.0% | |
| TGAGGTCAAGCAGGCCGACT+AGG | - | chr5.4:3916103-3916122 | None:intergenic | 60.0% | |
| TGCACCCCTGATGGGAATGC+TGG | + | chr5.4:3917030-3917049 | MS.gene22304:CDS | 60.0% | |
| TGCATCACCTGCACCCCTGA+TGG | + | chr5.4:3917021-3917040 | MS.gene22304:CDS | 60.0% | |
| TTTGAGGGGAGGGTAGGGGA+GGG | - | chr5.4:3918389-3918408 | None:intergenic | 60.0% | |
| TTTGGGGGGCGATGAAGGCA+GGG | + | chr5.4:3916951-3916970 | MS.gene22304:intron | 60.0% | |
| ! | AGCATTCCCATCAGGGGTGC+AGG | - | chr5.4:3917031-3917050 | None:intergenic | 60.0% |
| ! | ATCTGGATAAGGGCGCGCAC+AGG | - | chr5.4:3917742-3917761 | None:intergenic | 60.0% |
| ! | TACTCGCCGAGCGTAACGGA+TGG | - | chr5.4:3915322-3915341 | None:intergenic | 60.0% |
| ! | TCTGGGACATGCGCCCCATA+TGG | - | chr5.4:3915945-3915964 | None:intergenic | 60.0% |
| ! | TTCTGAGAGACCCCCATCCC+TGG | + | chr5.4:3916123-3916142 | MS.gene22304:intron | 60.0% |
| !! | TTTTGAGGGGAGGGTAGGGG+AGG | - | chr5.4:3918390-3918409 | None:intergenic | 60.0% |
| !! | TTTTGGGGGGCGATGAAGGC+AGG | + | chr5.4:3916950-3916969 | MS.gene22304:intron | 60.0% |
| !!! | GGGAGTTTTGAGGGGAGGGT+AGG | - | chr5.4:3918395-3918414 | None:intergenic | 60.0% |
| GGACGCGGTTCGCACTTTCC+TGG | + | chr5.4:3919380-3919399 | MS.gene22304:CDS | 65.0% | |
| GGGTCCCCCTGGTCTAGGTT+CGG | + | chr5.4:3916054-3916073 | MS.gene22304:intron | 65.0% | |
| GGTGGGCCATCCGTTACGCT+CGG | + | chr5.4:3915313-3915332 | MS.gene22304:CDS | 65.0% | |
| GTCTATGGACGCCAGGCCCA+GGG | - | chr5.4:3916143-3916162 | None:intergenic | 65.0% | |
| TGGGGCAGGTCTTCCTCTGG+TGG | + | chr5.4:3919013-3919032 | MS.gene22304:CDS | 65.0% | |
| TGTCTATGGACGCCAGGCCC+AGG | - | chr5.4:3916144-3916163 | None:intergenic | 65.0% | |
| ! | GGACAGTGTCAGTGGCGGAG+TGG | + | chr5.4:3917221-3917240 | MS.gene22304:intron | 65.0% |
| ATGGACGCCAGGCCCAGGGA+TGG | - | chr5.4:3916139-3916158 | None:intergenic | 70.0% | |
| TGGACGCCAGGCCCAGGGAT+GGG | - | chr5.4:3916138-3916157 | None:intergenic | 70.0% | |
| TGGTCGGGTCCCCCTGGTCT+AGG | + | chr5.4:3916049-3916068 | MS.gene22304:intron | 70.0% | |
| ! | TCTGGTTGGTCGGGTCCCCC+TGG | + | chr5.4:3916043-3916062 | MS.gene22304:intron | 70.0% |
| GACGCCAGGCCCAGGGATGG+GGG | - | chr5.4:3916136-3916155 | None:intergenic | 75.0% | |
| GAGACCCCCATCCCTGGGCC+TGG | + | chr5.4:3916129-3916148 | MS.gene22304:intron | 75.0% | |
| GGACGCCAGGCCCAGGGATG+GGG | - | chr5.4:3916137-3916156 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3915305 | 3919401 | 3915305 | ID=MS.gene22304 |
| chr5.4 | mRNA | 3915305 | 3919401 | 3915305 | ID=MS.gene22304.t1;Parent=MS.gene22304 |
| chr5.4 | exon | 3915305 | 3915369 | 3915305 | ID=MS.gene22304.t1.exon1;Parent=MS.gene22304.t1 |
| chr5.4 | CDS | 3915305 | 3915369 | 3915305 | ID=cds.MS.gene22304.t1;Parent=MS.gene22304.t1 |
| chr5.4 | exon | 3916972 | 3917095 | 3916972 | ID=MS.gene22304.t1.exon2;Parent=MS.gene22304.t1 |
| chr5.4 | CDS | 3916972 | 3917095 | 3916972 | ID=cds.MS.gene22304.t1;Parent=MS.gene22304.t1 |
| chr5.4 | exon | 3917594 | 3917858 | 3917594 | ID=MS.gene22304.t1.exon3;Parent=MS.gene22304.t1 |
| chr5.4 | CDS | 3917594 | 3917858 | 3917594 | ID=cds.MS.gene22304.t1;Parent=MS.gene22304.t1 |
| chr5.4 | exon | 3918761 | 3919040 | 3918761 | ID=MS.gene22304.t1.exon4;Parent=MS.gene22304.t1 |
| chr5.4 | CDS | 3918761 | 3919040 | 3918761 | ID=cds.MS.gene22304.t1;Parent=MS.gene22304.t1 |
| chr5.4 | exon | 3919120 | 3919316 | 3919120 | ID=MS.gene22304.t1.exon5;Parent=MS.gene22304.t1 |
| chr5.4 | CDS | 3919120 | 3919316 | 3919120 | ID=cds.MS.gene22304.t1;Parent=MS.gene22304.t1 |
| chr5.4 | exon | 3919349 | 3919401 | 3919349 | ID=MS.gene22304.t1.exon6;Parent=MS.gene22304.t1 |
| chr5.4 | CDS | 3919349 | 3919401 | 3919349 | ID=cds.MS.gene22304.t1;Parent=MS.gene22304.t1 |
| Gene Sequence |
| Protein sequence |
