AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22340.t1 MTR_5g009920 86.711 745 31 5 1 737 135 819 0.0 1307
MS.gene22340.t1 MTR_7g063200 56.250 272 88 6 1 268 127 371 7.22e-90 287
MS.gene22340.t1 MTR_8g447390 84.444 90 12 1 1 88 132 221 2.30e-44 159
MS.gene22340.t1 MTR_4g060510 30.275 109 73 1 166 271 351 459 6.20e-14 76.3
MS.gene22340.t1 MTR_4g060510 30.275 109 73 1 166 271 351 459 6.29e-14 76.3
MS.gene22340.t1 MTR_4g060510 30.275 109 73 1 166 271 351 459 7.20e-14 75.9
MS.gene22340.t1 MTR_2g093730 28.302 106 73 1 166 268 348 453 5.99e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22340.t1 AT5G41580 47.727 308 146 7 25 323 153 454 5.65e-86 288
MS.gene22340.t1 AT1G08910 47.200 250 109 6 25 270 123 353 1.17e-58 213
MS.gene22340.t1 AT5G60410 27.559 127 88 2 166 288 347 473 6.84e-12 69.7
MS.gene22340.t1 AT5G60410 27.559 127 88 2 166 288 347 473 6.84e-12 69.7
MS.gene22340.t1 AT5G60410 27.559 127 88 2 166 288 347 473 6.85e-12 69.7
MS.gene22340.t1 AT5G60410 27.559 127 88 2 166 288 347 473 7.18e-12 69.7
MS.gene22340.t1 AT5G60410 27.559 127 88 2 166 288 347 473 7.18e-12 69.7
MS.gene22340.t1 AT5G60410 27.559 127 88 2 166 288 347 473 8.89e-12 69.3

Find 195 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCTCAATGTTATCAATT+TGG 0.142707 5.1:+3475971 None:intergenic
GAAGATTTGTCCCAAATTTA+AGG 0.163350 5.1:+3475645 None:intergenic
GTGACTAGTATCCTTAAATT+TGG 0.171967 5.1:-3475656 MS.gene22340:CDS
GCAAAATCCAGCAACTAATT+TGG 0.176863 5.1:-3470986 MS.gene22340:CDS
ATTGGACCCAATTCCATATT+AGG 0.198424 5.1:+3477132 None:intergenic
CGAATGCGTGGAAGTCTTTC+AGG 0.233205 5.1:-3469715 MS.gene22340:CDS
CGTATCAAGACTCCTGTTAA+AGG 0.242769 5.1:-3472670 MS.gene22340:CDS
GCTTCGATTGACTCGATTAT+TGG 0.243453 5.1:+3477114 None:intergenic
GACCTTGTGGTCTTGAACTT+TGG 0.249873 5.1:+3469635 None:intergenic
CTTCTCAATGTTATCAATTT+GGG 0.269032 5.1:+3475972 None:intergenic
GAACATTATTCTTTGTGATA+TGG 0.283211 5.1:+3476968 None:intergenic
ACAATATTGGAAACGGTATC+AGG 0.290804 5.1:+3471405 None:intergenic
TTCAAATAGAGGATGACTTT+TGG 0.297967 5.1:-3471290 MS.gene22340:CDS
GTTGGTGAGGTCCACAATAT+TGG 0.311216 5.1:+3471392 None:intergenic
TTGCAGGTATTATCCTAATA+TGG 0.315026 5.1:-3477145 MS.gene22340:intron
TATATGAATTCAAACGAGTA+TGG 0.318224 5.1:-3471096 MS.gene22340:CDS
CCTGCATTGCAGCCTGGTTA+TGG 0.331075 5.1:-3477009 MS.gene22340:intron
CTCAGAAAATGATCAGAATA+AGG 0.333916 5.1:-3471478 MS.gene22340:CDS
TTGCATGAATGCCCTTTAAC+AGG 0.334801 5.1:+3472658 None:intergenic
TCTCTCTTAATTGTCCAATA+AGG 0.338239 5.1:-3475088 MS.gene22340:intron
TAGGACTCCTACAGCTATTC+AGG 0.342399 5.1:-3471043 MS.gene22340:CDS
AAGGTTAAAGCATACCTTAT+TGG 0.342861 5.1:+3475074 None:intergenic
GTATTATCCTAATATGGAAT+TGG 0.352095 5.1:-3477139 MS.gene22340:CDS
GTAGTACTCGGTTATGAGTT+GGG 0.353068 5.1:+3470253 None:intergenic
ACTGCAGGATGGCAAGAATT+AGG 0.353357 5.1:+3477446 None:intergenic
CACCAACAATGATAATGATT+TGG 0.360028 5.1:-3471376 MS.gene22340:CDS
ATTCTCAAGATGGGATTGTT+TGG 0.361264 5.1:-3469969 MS.gene22340:CDS
GATGGGATTGTTTGGACAGC+TGG 0.383394 5.1:-3469961 MS.gene22340:CDS
ATCTTGAGAATTACCTTGTC+TGG 0.383477 5.1:+3469981 None:intergenic
TGACTAGTATCCTTAAATTT+GGG 0.389003 5.1:-3475655 MS.gene22340:CDS
AAGGAATCCAAATTAGTTGC+TGG 0.389766 5.1:+3470979 None:intergenic
GAAACAGCATCAGCCAGTTC+AGG 0.390148 5.1:+3471210 None:intergenic
ATTCACAACCAGATCAGAAT+TGG 0.403779 5.1:-3469747 MS.gene22340:CDS
TAGCAATAGCCCTAGCTTGT+TGG 0.405143 5.1:+3469923 None:intergenic
TGTTGTTGAGATTCCTGAAC+TGG 0.405288 5.1:-3471223 MS.gene22340:CDS
GTCCAAATCATTATCATTGT+TGG 0.409949 5.1:+3471374 None:intergenic
ACATAATCTGGTGGAAGAAC+TGG 0.411589 5.1:+3475455 None:intergenic
ACATATTAACTGTTGGAAAT+CGG 0.411627 5.1:+3470280 None:intergenic
TGAGATCGTTGAGCATTTGA+TGG 0.413287 5.1:+3470090 None:intergenic
CAAGGATCCAACACTCATAT+AGG 0.417557 5.1:+3475487 None:intergenic
TTTCAGGCTTCTGCTCCTAC+TGG 0.418512 5.1:-3471315 MS.gene22340:CDS
TCATTAAAATAAATCTTAAG+AGG 0.419591 5.1:-3472128 MS.gene22340:CDS
GCCATTGTTTCTCAGGATCC+TGG 0.420968 5.1:-3475698 MS.gene22340:intron
GTTGCATTGGTTGGTGTGCA+TGG 0.421015 5.1:+3470112 None:intergenic
GCAAGTAGATTCTTGTTGTT+CGG 0.424406 5.1:+3471431 None:intergenic
CTTTGTAGCATTCTCCTGAA+TGG 0.425155 5.1:-3475838 MS.gene22340:intron
ATTGGGACTGTCTGGCAGCC+AGG 0.425956 5.1:+3469896 None:intergenic
GTGGTCCTGATGTCTGAGAT+TGG 0.428559 5.1:+3471010 None:intergenic
AGTGGGGATGTTGGTCGGCC+TGG 0.429349 5.1:+3469607 None:intergenic
TCTGCTTCTTGATTAAATAC+AGG 0.431675 5.1:+3471186 None:intergenic
AGGAGCAGCAGATGGATTGC+TGG 0.439185 5.1:+3470951 None:intergenic
TATATTGCCAACGGTGGGTC+TGG 0.439366 5.1:-3471258 MS.gene22340:CDS
CGGCAGCGAGACTTATTCAT+AGG 0.443670 5.1:-3471062 MS.gene22340:CDS
TGCATTATAGTTAATACTGC+AGG 0.447031 5.1:+3477431 None:intergenic
TATTATCCTAATATGGAATT+GGG 0.447975 5.1:-3477138 MS.gene22340:CDS
CATTTGATGGTTGCATTGGT+TGG 0.448702 5.1:+3470103 None:intergenic
CCTGATGTCTGAGATTGGAC+TGG 0.449169 5.1:+3471015 None:intergenic
GATGTTGGTCGGCCTGGTTG+TGG 0.451719 5.1:+3469613 None:intergenic
GTAGCAGCTGACATATTAAC+TGG 0.451955 5.1:+3470231 None:intergenic
ACAGCAGGCTGAACATAATC+TGG 0.453979 5.1:+3475443 None:intergenic
GCAGACAGGCTGATTGCAAT+GGG 0.454796 5.1:+3472089 None:intergenic
AGCATATCTGTTCTGTGTGG+TGG 0.466341 5.1:+3470177 None:intergenic
GCAAAGAGGACCACCAGTAC+AGG 0.467098 5.1:-3469797 MS.gene22340:CDS
TTGGGACTGTCTGGCAGCCA+GGG 0.470670 5.1:+3469897 None:intergenic
TCCTACTGGCGTTCAAATAG+AGG 0.471110 5.1:-3471301 MS.gene22340:CDS
TTGTAAGGATCTGCAGAGGC+AGG 0.472072 5.1:+3470910 None:intergenic
GTATCAAGACTCCTGTTAAA+GGG 0.475781 5.1:-3472669 MS.gene22340:CDS
ATGTATATAGCCAACAAGCT+AGG 0.477914 5.1:-3469933 MS.gene22340:CDS
TTAACTGCAGTGGTTATTGG+TGG 0.480339 5.1:-3475995 MS.gene22340:intron
ACCTGTGTTGCTGCTGAGAC+AGG 0.481369 5.1:+3470826 None:intergenic
CTGATGTCTGAGATTGGACT+GGG 0.483349 5.1:+3471016 None:intergenic
AGATGGATTGCTGGTTATCA+AGG 0.484090 5.1:+3470960 None:intergenic
AGCTACAGCAAGTAGCCAAC+AGG 0.485148 5.1:-3470031 MS.gene22340:CDS
TAAGGCCTACGATTGTGAAA+TGG 0.485780 5.1:-3471460 MS.gene22340:CDS
TCACTTGCTGTGGGCTGATG+AGG 0.489009 5.1:+3475941 None:intergenic
AGCATTCTCCTGAATGGAAA+AGG 0.497355 5.1:-3475832 MS.gene22340:CDS
TGAAATGGATTGGGACTGTC+TGG 0.499090 5.1:+3469888 None:intergenic
GGAATCTCAACAACAGCTGT+AGG 0.499503 5.1:+3471231 None:intergenic
TCACTCAGAATGGCATTGTA+AGG 0.501316 5.1:+3470895 None:intergenic
GAAACAGACCATTCGAAAGT+TGG 0.502758 5.1:+3475795 None:intergenic
CTTTGGACTTGATGTGATGA+TGG 0.504163 5.1:+3469652 None:intergenic
CAGGTGGGCAACTGTGGTCC+AGG 0.504260 5.1:+3475680 None:intergenic
CCAGTCCAATCTCAGACATC+AGG 0.504469 5.1:-3471015 MS.gene22340:CDS
GTACTAGAAACTGCCTGTAC+TGG 0.504580 5.1:+3469784 None:intergenic
GTAGGACGCCAATTCTGATC+TGG 0.505115 5.1:+3469739 None:intergenic
CATCCAGTGGGGATGTTGGT+CGG 0.508490 5.1:+3469602 None:intergenic
CAATATTGGAAACGGTATCA+GGG 0.509177 5.1:+3471406 None:intergenic
TAAATCTTAAGAGGCCATCC+TGG 0.511976 5.1:-3472119 MS.gene22340:CDS
TATGCAATTGACTTGGTGCT+CGG 0.512409 5.1:+3470202 None:intergenic
GTAGGAGCAGAAGCCTGAAA+AGG 0.515223 5.1:+3471318 None:intergenic
GGTTCACAAGCTTATGCAGC+TGG 0.517823 5.1:-3470054 MS.gene22340:CDS
GAATCTCAACAACAGCTGTA+GGG 0.519052 5.1:+3471232 None:intergenic
TTGCATTGGTTGGTGTGCAT+GGG 0.519731 5.1:+3470113 None:intergenic
GCATATCTGTTCTGTGTGGT+GGG 0.520076 5.1:+3470178 None:intergenic
GACAAATCTTCTTCAAGCTG+TGG 0.520325 5.1:-3475633 MS.gene22340:CDS
AGCAACTTACTGAAGATGTT+AGG 0.523348 5.1:-3469690 MS.gene22340:CDS
TGATACCGTTTCCAATATTG+TGG 0.523441 5.1:-3471403 MS.gene22340:CDS
GTCTTTATATTGCCAACGGT+GGG 0.526311 5.1:-3471263 MS.gene22340:CDS
TCCTGTCTCAGCAGCAACAC+AGG 0.526695 5.1:-3470827 MS.gene22340:intron
CGAATTTCTGTATAGCAGAC+AGG 0.533356 5.1:+3472075 None:intergenic
AGGATCTGCAGAGGCAGGGT+TGG 0.534550 5.1:+3470915 None:intergenic
GGTAGTACTCGGTTATGAGT+TGG 0.536119 5.1:+3470252 None:intergenic
AGACAAGGTAATTCTCAAGA+TGG 0.536177 5.1:-3469979 MS.gene22340:CDS
AAAACATACTTCACTTGCTG+TGG 0.537317 5.1:+3475931 None:intergenic
TGTATATAGCCAACAAGCTA+GGG 0.540474 5.1:-3469932 MS.gene22340:CDS
AGCAGACAGGCTGATTGCAA+TGG 0.540650 5.1:+3472088 None:intergenic
GACAAGGTAATTCTCAAGAT+GGG 0.541237 5.1:-3469978 MS.gene22340:CDS
TGAGCATTTGATGGTTGCAT+TGG 0.541940 5.1:+3470099 None:intergenic
GGGGCTGACATATTAACTGT+TGG 0.547235 5.1:+3470273 None:intergenic
CTTGTTGCCTATATGAGTGT+TGG 0.549590 5.1:-3475494 MS.gene22340:CDS
GGTGGAAGAACTGGATGCGC+AGG 0.549852 5.1:+3475464 None:intergenic
GAGGTCCACAATATTGGAAA+CGG 0.551485 5.1:+3471398 None:intergenic
CCTGCTGTATCTGTTGATGC+AGG 0.551853 5.1:-3475428 MS.gene22340:intron
ACAAATCTTCTTCAAGCTGT+GGG 0.552823 5.1:-3475632 MS.gene22340:CDS
AATCATTATCATTGTTGGTG+AGG 0.556311 5.1:+3471379 None:intergenic
ATGAATAAGTCTCGCTGCCG+AGG 0.559974 5.1:+3471065 None:intergenic
AAGCCATCACTCTGGCCTGT+TGG 0.559993 5.1:+3470016 None:intergenic
TAGGGCTATTGCTAATGCCC+TGG 0.560518 5.1:-3469914 MS.gene22340:CDS
TCTTTCTGCATCACTCAGAA+TGG 0.560756 5.1:+3470885 None:intergenic
ATATGAATTCAAACGAGTAT+GGG 0.565564 5.1:-3471095 MS.gene22340:CDS
CAACGATCTCACATTCAACA+AGG 0.566485 5.1:-3470078 MS.gene22340:CDS
TGAAGCTGATGGATCGTGGA+AGG 0.568355 5.1:-3471505 MS.gene22340:CDS
CAAGCTGTGGGTCAGTTCGA+TGG 0.568802 5.1:-3475620 MS.gene22340:intron
TTTACAGCTGACAGTTTCTG+GGG 0.569694 5.1:-3469832 MS.gene22340:CDS
GAAACATGAGGAGCAGCAGA+TGG 0.569827 5.1:+3470943 None:intergenic
GCTGATGGATCGTGGAAGGT+AGG 0.574070 5.1:-3471501 MS.gene22340:CDS
TGCATTTCCCAGTGTGCAGT+AGG 0.575256 5.1:+3477478 None:intergenic
AGTCTTTATATTGCCAACGG+TGG 0.575866 5.1:-3471264 MS.gene22340:CDS
AAGAACTGGATGCGCAGGCA+AGG 0.576782 5.1:+3475469 None:intergenic
CGAGTATGGGAGGTCATCCT+CGG 0.576987 5.1:-3471082 MS.gene22340:CDS
AGGCCGACCAACATCCCCAC+TGG 0.578122 5.1:-3469605 MS.gene22340:CDS
GCTAGTCTTTATATTGCCAA+CGG 0.580281 5.1:-3471267 MS.gene22340:CDS
ACAGCAGAAGCTCCATAACC+AGG 0.580618 5.1:+3476997 None:intergenic
CAAAGATATCACGGTCTCGA+AGG 0.584766 5.1:+3469547 None:intergenic
TGGCGTCCTACGCGAATGCG+TGG 0.584876 5.1:-3469727 MS.gene22340:CDS
ATGTGATGAAGCCATCACTC+TGG 0.585150 5.1:+3470008 None:intergenic
TCTTGACAGAAACATGATTG+AGG 0.585741 5.1:-3472052 MS.gene22340:intron
GGTGGGTTATGCAATTGACT+TGG 0.586533 5.1:+3470195 None:intergenic
CGGCCTGGTTGTGGACCTTG+TGG 0.587308 5.1:+3469622 None:intergenic
TAGTACTCGGTTATGAGTTG+GGG 0.589650 5.1:+3470254 None:intergenic
TGTCTGAGATTGGACTGGGA+GGG 0.590186 5.1:+3471020 None:intergenic
GTCACACAGGTGGGCAACTG+TGG 0.591084 5.1:+3475674 None:intergenic
AGGATGGCAAGAATTAGGTT+CGG 0.592268 5.1:+3477451 None:intergenic
TAGCCAACAGGCCAGAGTGA+TGG 0.593990 5.1:-3470019 MS.gene22340:CDS
GGGCATTCAGAGTTTGCTGA+AGG 0.594538 5.1:+3470133 None:intergenic
AGACCACAAGGTCCACAACC+AGG 0.595290 5.1:-3469625 MS.gene22340:CDS
TCATCACATGTTGCCAGACA+AGG 0.595732 5.1:-3469994 MS.gene22340:CDS
AGACAGGCTGATTGCAATGG+GGG 0.598590 5.1:+3472091 None:intergenic
ATGTCTGAGATTGGACTGGG+AGG 0.604193 5.1:+3471019 None:intergenic
CTGTTCCATTTCACAATCGT+AGG 0.608870 5.1:+3471455 None:intergenic
CTAGAAACTGCCTGTACTGG+TGG 0.610220 5.1:+3469787 None:intergenic
TGTATTTAATCAAGAAGCAG+AGG 0.610348 5.1:-3471184 MS.gene22340:CDS
TACAAGGACCAACTTTCGAA+TGG 0.611482 5.1:-3475803 MS.gene22340:intron
GGGAGGGCCTGAATAGCTGT+AGG 0.612706 5.1:+3471036 None:intergenic
AATATTGGAAACGGTATCAG+GGG 0.613244 5.1:+3471407 None:intergenic
TAGCAATGAGTGCATCCAGT+GGG 0.613683 5.1:+3469590 None:intergenic
AAACATACTTCACTTGCTGT+GGG 0.615861 5.1:+3475932 None:intergenic
AGGATACTAGTCACACAGGT+GGG 0.618545 5.1:+3475665 None:intergenic
AATCTCAACAACAGCTGTAG+GGG 0.619407 5.1:+3471233 None:intergenic
ACATATTAACTGGTAGTACT+CGG 0.619625 5.1:+3470241 None:intergenic
AGTGCATCCAGTGGGGATGT+TGG 0.625884 5.1:+3469598 None:intergenic
CAGTATTAACTATAATGCAA+AGG 0.627544 5.1:-3477427 MS.gene22340:intron
GCAGGCTGAACATAATCTGG+TGG 0.631588 5.1:+3475446 None:intergenic
CAGGAGTCTTGATACGCGTA+CGG 0.634194 5.1:+3472677 None:intergenic
TGTAAGGATCTGCAGAGGCA+GGG 0.634324 5.1:+3470911 None:intergenic
CCTGCATCAACAGATACAGC+AGG 0.634428 5.1:+3475428 None:intergenic
TCCTCTATTTGAACGCCAGT+AGG 0.634640 5.1:+3471300 None:intergenic
ATAGATTCAGATATTATCGA+GGG 0.634714 5.1:-3475122 MS.gene22340:intron
ATATTGGAAACGGTATCAGG+GGG 0.638111 5.1:+3471408 None:intergenic
ACGATCTCACATTCAACAAG+GGG 0.640107 5.1:-3470076 MS.gene22340:CDS
TTACAGCTGACAGTTTCTGG+GGG 0.642824 5.1:-3469831 MS.gene22340:CDS
AAAAGTTGGTGAGAACATTG+TGG 0.645022 5.1:-3471538 MS.gene22340:CDS
GTCCAAAGTTCAAGACCACA+AGG 0.648817 5.1:-3469637 MS.gene22340:CDS
AACGATCTCACATTCAACAA+GGG 0.648933 5.1:-3470077 MS.gene22340:CDS
TATAGATTCAGATATTATCG+AGG 0.650562 5.1:-3475123 MS.gene22340:intron
ATGGAAAAGGAATTGATACA+AGG 0.650862 5.1:-3475819 MS.gene22340:CDS
TGAATTCAAACGAGTATGGG+AGG 0.651901 5.1:-3471092 MS.gene22340:CDS
TTTAAGGATACTAGTCACAC+AGG 0.661802 5.1:+3475661 None:intergenic
AGACTTCCACGCATTCGCGT+AGG 0.662484 5.1:+3469721 None:intergenic
GTATTTAATCAAGAAGCAGA+GGG 0.669244 5.1:-3471183 MS.gene22340:CDS
AAGGATACTAGTCACACAGG+TGG 0.672225 5.1:+3475664 None:intergenic
TGTGTTGCTGCTGAGACAGG+AGG 0.681287 5.1:+3470829 None:intergenic
GGCATTGTAAGGATCTGCAG+AGG 0.687949 5.1:+3470906 None:intergenic
TTAGCAATGAGTGCATCCAG+TGG 0.692794 5.1:+3469589 None:intergenic
AGGGGTACCAGACCCACCGT+TGG 0.695241 5.1:+3471251 None:intergenic
TTCAGCATATCTGTTCTGTG+TGG 0.695517 5.1:+3470174 None:intergenic
TTATAGTTAATACTGCAGGA+TGG 0.705534 5.1:+3477435 None:intergenic
ACTGTCAGCTGTAAAACATG+TGG 0.705698 5.1:+3469840 None:intergenic
GACAGGAGGCACATTCAATG+CGG 0.714156 5.1:+3470843 None:intergenic
CAGACAGGCTGATTGCAATG+GGG 0.714556 5.1:+3472090 None:intergenic
TATTGGAAACGGTATCAGGG+GGG 0.716622 5.1:+3471409 None:intergenic
GGGTTGGACAAAGAAACATG+AGG 0.749016 5.1:+3470931 None:intergenic
CGATCTCACATTCAACAAGG+GGG 0.753471 5.1:-3470075 MS.gene22340:CDS
GGGTTGACAGGAGAGCAAAG+AGG 0.756130 5.1:-3469811 MS.gene22340:CDS
AGCAATGAGTGCATCCAGTG+GGG 0.780427 5.1:+3469591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.1 gene 3469555 3477510 3469555 ID=MS.gene22340
chr5.1 mRNA 3469555 3477510 3469555 ID=MS.gene22340.t1;Parent=MS.gene22340
chr5.1 exon 3477428 3477510 3477428 ID=MS.gene22340.t1.exon1;Parent=MS.gene22340.t1
chr5.1 CDS 3477428 3477510 3477428 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3477116 3477161 3477116 ID=MS.gene22340.t1.exon2;Parent=MS.gene22340.t1
chr5.1 CDS 3477116 3477161 3477116 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3476951 3477019 3476951 ID=MS.gene22340.t1.exon3;Parent=MS.gene22340.t1
chr5.1 CDS 3476951 3477019 3476951 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3475940 3476007 3475940 ID=MS.gene22340.t1.exon4;Parent=MS.gene22340.t1
chr5.1 CDS 3475940 3476007 3475940 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3475804 3475852 3475804 ID=MS.gene22340.t1.exon5;Parent=MS.gene22340.t1
chr5.1 CDS 3475804 3475852 3475804 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3475621 3475705 3475621 ID=MS.gene22340.t1.exon6;Parent=MS.gene22340.t1
chr5.1 CDS 3475621 3475705 3475621 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3475429 3475530 3475429 ID=MS.gene22340.t1.exon7;Parent=MS.gene22340.t1
chr5.1 CDS 3475429 3475530 3475429 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3475089 3475140 3475089 ID=MS.gene22340.t1.exon8;Parent=MS.gene22340.t1
chr5.1 CDS 3475089 3475140 3475089 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3472648 3472699 3472648 ID=MS.gene22340.t1.exon9;Parent=MS.gene22340.t1
chr5.1 CDS 3472648 3472699 3472648 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3472053 3472169 3472053 ID=MS.gene22340.t1.exon10;Parent=MS.gene22340.t1
chr5.1 CDS 3472053 3472169 3472053 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3470828 3471568 3470828 ID=MS.gene22340.t1.exon11;Parent=MS.gene22340.t1
chr5.1 CDS 3470828 3471568 3470828 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
chr5.1 exon 3469555 3470304 3469555 ID=MS.gene22340.t1.exon12;Parent=MS.gene22340.t1
chr5.1 CDS 3469555 3470304 3469555 ID=cds.MS.gene22340.t1;Parent=MS.gene22340.t1
Gene Sequence

>MS.gene22340

ATAGGAAAAACCTACTGCACACTGGGAAATGCAATTGCCGAACCTAATTCTTGCCATCCTGCAGTATTAACTATAATGCAAAGGTAGGGATCCTTGAAAACTTCCTCTAGATATGTTTCTACATCTTTTATCTTATTTTTGAATTGAACAATAAAATTTTGCTCTGTGTTTTTCTGTAAACTTGCAACTATTACTGATGTTAAGTACAAGAACTAGGATAAACCAAAAGACCTACAAGAAAAATATGTGTTGTTTTTATGTAGCTCGCAACTATTACTGATTGCTTTTATCTCTTACTATTTCTGATATGCAACAGTAATTAGTTGTCTATACGTGACTGCCATTGCAGGTATTATCCTAATATGGAATTGGGTCCAATAATCGAGTCAATCGAAGCCAGGTGGTTCTTTTAGATAGTCAAATTGCGATTGTCAAATCTAGTCGTATTTCATATCGAGAACATATTTAATATCATTTGACCTGCATTGCAGCCTGGTTATGGAGCTTCTGCTGTTGACTTCCATATCACAAAGAATAATGTTCAATCCGATAAAAAAATTGTAAGAATTCCCTGGATTGATTTGTTTTGTTAAACTTTGTACATGTGACGAACTCCTAACTTAGGGCCCTGTTTGTTATAGTTTTAAAAAAAGTGACTTCTGCTTTATATTTCTAGAAATGATTTTTATGAAAACTTCTTCAAAAATAGTAGAAATCACATAATTTTTCAAAAAAAATAGAGATCCCACATCAATCACGTAAATGACAAATGTAGTCCTTGTCACCATGAGCTAGCATTTGTGGCTGAGTTTTCCTTATTGCAAATTATAAGAAAAAACTAGAATAAAAGAAAAATATGAATATTATTCGATGATTTGAATGTTCCAAACTAATACCATTTTATAGAAATTTTTGGTAACCATGTTATAGGAATAAAGTGCCTATTGATTTACCAATGATTTATCTTCATCGGAGAACCTGGTTGGCTACCTTTAATGGGGATTCCCCTCTCAACCATAATTTTTTAACCCACAAGACTCGAACTCGAACCCAAAACTTTGCTTAAAGGATGTTAGTTGAGTTCTACTTGGACCAAAGATCATGTTAGTACACCAATATATAGACATACTTGTAGATGGTAACTAACAAAACTTGTCCTAATTATTACAGGCTATCGTGGTGACATTTATAGAAAACATTGTTAAATAGCGACTACAGCGCTATAGCATAGTGGAATATGAACAAATTGCTTGCTATTGTTCTGGAATACATATTTATTTAGTACAAAAGGTTGTCAAATAGCGGCGCTATAGCATTGTTGCGTAGCAAAATTTGAATAAATCGCAATTTTTCGCAATCCGCAATTGACAACACTGTAAAAAAGAAAAAAAAAATAAAAACTATGTTCTACCCCAAAATAACTCTTTACATATTTACAGCATTTTTTGTCAATATACATTTAGAATATTTGTTATTTGAACACACCACATATTTTAACTGCAGTGGTTATTGGTGGCCCAAATTGATAACATTGAGAAGTCTGCATGCCTCATCAGCCCACAGCAAGTGAAGTATGTTTTCTTTTAACTTTCTTGATTTTAATTGTGTGGAAGGGTTGTACATGGATGCTGACTGTGACTATCTTTGCATCTTTGTAGCATTCTCCTGAATGGAAAAGGAATTGATACAAGGACCAACTTTCGAATGGTCTGTTTCTTTGTTTGAATACACATTACAATTTATTTAGTGTACACTGTTTTAAGGGTGTAACACCAGTTTGCTACATATATGCCATTGTTTCTCAGGATCCTGGACCACAGTTGCCCACCTGTGTGACTAGTATCCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGTCAGTTCGATGGTGAGCATTTAGAATAGTGTTTTATTTCCACCCAGTTGTCCTGTTTTCAATGTATGCATCTAACTGTACTGTACCATTATCATTGTGAAGGGCGTTATATTATACTTGTTGCCTATATGAGTGTTGGATCCTTGCCTGCGCATCCAGTTCTTCCACCAGATTATGTTCAGCCTGCTGTATCTGTTGATGCAGGTATAATTTGTAAATTTAGGACAACACTTAGGTGCATTTCCTTATGTGCTTTTTGTATGGTTCTCAACTTAAAATACACATTTTGTGGTTATAACAAACTCTGAGAAAATTATGGATTTGAGAAAATCATAGGTAGTTAAGAATCATTGGTTCACCTAAGGAAATGCACCTAAGTTTTTTCCTGAAATTGTTTTTTACTTTTTCTTATTAGCCAATCATTTATAATCATTGTTGTATTTTGTTTTCTATATCGTTCATTTTTATCATTTTCCATCTTTATGCATATAGATTCAGATATTATCGAGGGAAAATCAAAAATCTCTCTTAATTGTCCAATAAGGTATGCTTTAACCTTCTCTGTTCACAATATTGATCACTTTTTTCTTCCTTGCTTTATCTGTTGCTAGTTTTCTCATCTTTAGACTTCAGATTGAGCATGGTAGTATCATAGGTGGTTCTCATTTGAGTTCCATTTCAGTCTCTTATTCTTTCTGGGTCTGGTCTATCAGAAAATATGCCCCTGACTGACTTTGAACTTGAACAATGAGGGAGGTAGTTATTCACGGTCTTATCCTTTTGTCGATGTTGAAAATTCGCTTGTCAATTGTCTAATAACATTTTGTTATAAATGCAGTTTAATTTTTAGAGTCATTTGGCTATGTTTGTGTTGAAATTTTCTTTAGAACCACTTTAATTTTGTTTGTTCATTGTAGAAAGTCAGAAGTCAAAATTCAGCTGATTTTTAGTTTGAATTATAATAGTTTATTCAGTCAGTGATATTTTTGTAATTTTAAACTAGTGGAGTTCATGTCTTAGATATTCTCCTTTCTTAAGGCCTTTCTGTGCTGGAATAGGGTTAGATGCTGGTGAACAATGACCATGTGGTATCTAGTTCTAATTACTTACTTGACTGCCAGTTTATTAACAAGTCTAAATTATTAAATACTTTTTAATTATAATATAGACTTATAATTTCTTAACGTGGTATCCTCTTTCAGCTGATTTCTAGTTTGAATTATAATTGTTTATTCGGTCAGTGTTATTTTTGTTATTTCGATTAGTGCAGCTCATGATAGTCAAATCGGGATACGTACCGTGTATCGTAAGATACATTAACAAAAAATATATGACTTAAAATATCATATATAAACTCCAAAATATTTCAAATATCATATATAAACTTCAAGATACTTCAAAACTCAAGTCATAAACAAAAATAAATAACATAAAGCATCCTTAAACATCTCTTTAACTTCATCCGGAACAGAAGCACAATGAATAACATTCTTATTTGTCCCAGCAGGATGACATTTCATCCTTAAAGTACCACCCCAACAAGGATATTGCAATATTTGCATTTGACATAGAGCCTATTATTAGGTTCAACAGCACAACAATGATCCCATGTGATACCACGGTATCTCTTCTTTTTTGTCTGCCACAGAGCAGAGGAACAAAGAAAGATAGCAGAAAACAGAGAGATAGAGAAACCGAGATATATAGAAAGATAGTGGGTACTAGGAAATTGTAAACAGGGAAATAAATCATTGAGTCGTGGCCCGTGGGGTATTGGAAAGGTTACAAGTTACGATTTAAGTCTGAAAGGTTATAGGAAAGTATTGAATCGTGGGGTGTTGAACAGTATTGGAAACATTACTAGTTATGGGAAAGGTAACAATTTAATTCCCTTAATAACCAAAAATGCTACTTTATTGGAAAAAAGAATAAAAAGCGGCGCTGCTAAACAGAAAAATAGGAGGAACTACTACACTGGTTTGGGATACTGAGTAAAATATGTATCGGTGAAGGGTGTTTTCGTATCGTATCGTATCACGATACGTATCTTATGCATTGTAGGATACAATGTGTTTTGGGATACGGAGTAAGATTGATTTCGTATGGTATCGCGGTATGTATCATAGGATGCTTACTACACTGGCGGAGTTCACGCCTTAGATATTCACCTTTCTTAACGCCTTTCTCTGCTGGAATAGGGTTAGATGCTGATGAACAATGGCCATGTGGCATCTAGGTCTAATTTCTTAATTGACTGTCCAGTTTATTAATAAGTCTAAATTATTAAATATTTTTGAGAACTTTTCCGTTTACTCACCTTTTCTAATTTCCTAATGAATATTTTACGTGTTTAGTCTTCCAGAACCCTCTGGTCAGTTAATCTTTTCTAATCTTATCTTAAAAGCCTAATATTTCTTACCCCGTACTTTATTTTAATGTATTACTATTTGACCCTGCCCTTCTTTTTTGGCACTGCTACCTTTTTGTTAGACTGAGCGAAATCTGTTCAAATATATAGTTTTAGAATACTTTTTATCTGTTATGTTTCTCTTATTCTCCTTGCTTGGTAATTGGTATTAGTTCATGAACTCTCTTTGCATGCCATTTGTGAGCTGCAAGCTTGTCCAACTTATGGAATTTTAGTTCATGAACTTTTAGTATGGAATTTTTAGCATTAACTATTCACAATAATCTTTTAAAGTTTTTTTTTTGTCTAGCAAGTATGATTTTTCTGCTGGCTTCTTTTATATTTATCTTGTAACTTGTTGTATTCTTTCACTAGAATGCTTTACTTTACTTTGCAGACTTTATACTAAGATCATCTGTTCAGTTATCCTTCAAGTTGGAATTTTTACTTTTGATGATAGTTTTTTCAAAAAAAACTTTTTTTTTGATTAAAATTGATATCCTGTGTTCTCATCTTTACAAAACAGCCGTACGCGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTTCAGGTGAGTAATTCCTGTATTAGCATCACATAATATGGAGAATGCTGGGGTGGTTGCTGATTAATTATATACTTGTTACTTACCGTTAATGATAAATGCGGCGTAGAAGTCTGTTTTTCACCTTATTTAAGTTAAAAAGTAAGTTACCAGTGTTGTTAAATAGCGGCACTATTGCACAGCCAAATTTTAACAAATCGCTATTGTTCCGCGATACGTCTTCAGTACAAAATAGTCTTGATTAGAGTCTATAGAGGCACTATAACACTGTTGTGTAGCGGAATTTCAACAAAGTGCTATTATACGCGATCAGCAGTTGACTGCACTGAATGTTACCTAAATGTTTGCAGAATAATATTTATGATAAAGTGAAAATCTTATGATGTGGTTCTGTGTATGTGGGTGGCTGGGCTTATGTGTATTAATATATATTCCCTGGCTGTTTTCTCCCATCTACCTTACATTTATGTTCTCTTTTCTGCAGTGCTTTGACTTTGACAACTTCATTAAAATAAATCTTAAGAGGCCATCCTGGCGCTGCCCCCATTGCAATCAGCCTGTCTGCTATACAGAAATTCGTCTTGACAGAAACATGATTGAGGCAAGTTGATTTTGTTCTTCAATCTTTCAGTGAAATTACCTTTTGTTTATCTTCTTTCTCCTAGAGTCAGTTTGCTATCAACTTACAATTGGGAATGTATGGTTTAGTAATTTATTTTTCATGCCAATCTCTTACTCCCTCCGCCCCTATTCTTTGGTCCTTTTAGGTTTGAACATACATATTAAGAAATAATGAAGTTAGATAAGTTTAGACCCTTTTACTCTTGACTCATTTTGTAAAAGTAAAATTCATTTAATGCTTTTTGTGAAGGGTGCAAAAGGAAAAACATCATTAATTGTCTCTTGGTTTCGTAAAAAACCCGAAGTTTTGGGACAAAAATAAAAGCTTAAAGGACCAAAGGTTAGGGACGGAGGGAGTACCATAATTCCAATTTTCCCAATTTTAATAGCAAACCAAGTTGACTGTAGGGATGAAAGAAAGGTTGAAAAGAAAAATTAACCTTTATTTTCCTCTCTAAATAAAGGTCCTGGAAAAAGTTGGTGAGAACATTGTGGAAGTGACTTTTGAAGCTGATGGATCGTGGAAGGTAGGCTCAGAAAATGATCAGAATAAGGCCTACGATTGTGAAATGGAACAGACCGAACAACAAGAATCTACTTGCCCCCCTGATACCGTTTCCAATATTGTGGACCTCACCAACAATGATAATGATTTGGACACAATGTGCACTTATGAAACTGCAGATCGAAAGCCTTTTCAGGCTTCTGCTCCTACTGGCGTTCAAATAGAGGATGACTTTTGGGCTAGTCTTTATATTGCCAACGGTGGGTCTGGTACCCCTACAGCTGTTGTTGAGATTCCTGAACTGGCTGATGCTGTTTCTCCTGTATTTAATCAAGAAGCAGAGGGTCATGACAATGTTCCTGCCATGCATAACCAGTTTTTAGGACAGAATAATTTGACGCTGATGAATTATATGAATTCAAACGAGTATGGGAGGTCATCCTCGGCAGCGAGACTTATTCATAGGACTCCTACAGCTATTCAGGCCCTCCCAGTCCAATCTCAGACATCAGGACCACAGCAAAATCCAGCAACTAATTTGGATTCCTTGATAACCAGCAATCCATCTGCTGCTCCTCATGTTTCTTTGTCCAACCCTGCCTCTGCAGATCCTTACAATGCCATTCTGAGTGATGCAGAAAGACAGCAACTTTTTTCTCGATCCGCATTGAATGTGCCTCCTGTCTCAGCAGCAACACAGGTTCGTTTTATTAATGCTCTGTTGTCAATCCTTGTATTGGGTGAGAGTTTTGGGGATGCATAGTCTGTTCAATTTGCATCTGAAGTGGCAACTTACTATTTTTTACATCTTTGTTCCTTGAAATGAAAATATCACAACTGCTCATATAATAAGAAAGTGACTGAACTTGAATCCTGTTTGAAATATGGTTTTGGGATTAAAACAGTTTAAATATTCTTTTAACTAAAAGGCAGTGGGAAGACAAATTTTTTGGTTTTGTGAAAGGAGGAAACATTGGCATTAGTCTGTCTTACTTTTCAAAGAAATTATACAAGATCAAGATTTAAAGGGATCCACTAAAGATGAGAATGTGAGAGTCTTATTTTCTTTCCAGTCTTTGTTCTCCTGCTACTTGGTGAACTGGTTGATAATTTTTATGCCTCTAATGTGTTCATTTAATAATCTGGAAATCTTTAGAGCTTTTTTGTGTGTTTCTTGCTGTTTATGACTCTTGTACTTAAGTTTTACTTTTCATTGAACTCAGAACCGATTTCCAACAGTTAATATGTCAGCCCCAACTCATAACCGAGTACTACCAGTTAATATGTCAGCTGCTACTCATAACCGAGCACCAAGTCAATTGCATAACCCACCACACAGAACAGATATGCTGAATGACTTCAGAAATTCACACCTTCAGCAAACTCTGAATGCCCATGCACACCAACCAATGCAACCATCAAATGCTCAACGATCTCACATTCAACAAGGGGGTTCACAAGCTTATGCAGCTGGAGCTACAGCAAGTAGCCAACAGGCCAGAGTGATGGCTTCATCACATGTTGCCAGACAAGGTAATTCTCAAGATGGGATTGTTTGGACAGCTGGAGCTAATGTATATAGCCAACAAGCTAGGGCTATTGCTAATGCCCTGGCTGCCAGACAGTCCCAATCCATTTCATCTCAAAATCAAACTTGTGTAGCAGCCACATGTTTTACAGCTGACAGTTTCTGGGGGTTGACAGGAGAGCAAAGAGGACCACCAGTACAGGCAGTTTCTAGTACTGATGAATTGTTCAATTCACAACCAGATCAGAATTGGCGTCCTACGCGAATGCGTGGAAGTCTTTCAGGTCAGCAACTTACTGAAGATGTTAGGCAGCGATTGATTATGCCATCATCACATCAAGTCCAAAGTTCAAGACCACAAGGTCCACAACCAGGCCGACCAACATCCCCACTGGATGCACTCATTGCTAACAATCGAAATGCTCAGAATCCTTCGAGACCGTGA
Protein sequence

>MS.gene22340.t1

IGKTYCTLGNAIAEPNSCHPAVLTIMQRYYPNMELGPIIESIEPGYGASAVDFHITKNNVQSDKKIWLLVAQIDNIEKSACLISPQQVNILLNGKGIDTRTNFRMDPGPQLPTCVTSILKFGTNLLQAVGQFDGRYIILVAYMSVGSLPAHPVLPPDYVQPAVSVDADSDIIEGKSKISLNCPISRTRIKTPVKGHSCKHFQCFDFDNFIKINLKRPSWRCPHCNQPVCYTEIRLDRNMIEVLEKVGENIVEVTFEADGSWKVGSENDQNKAYDCEMEQTEQQESTCPPDTVSNIVDLTNNDNDLDTMCTYETADRKPFQASAPTGVQIEDDFWASLYIANGGSGTPTAVVEIPELADAVSPVFNQEAEGHDNVPAMHNQFLGQNNLTLMNYMNSNEYGRSSSAARLIHRTPTAIQALPVQSQTSGPQQNPATNLDSLITSNPSAAPHVSLSNPASADPYNAILSDAERQQLFSRSALNVPPVSAATQNRFPTVNMSAPTHNRVLPVNMSAATHNRAPSQLHNPPHRTDMLNDFRNSHLQQTLNAHAHQPMQPSNAQRSHIQQGGSQAYAAGATASSQQARVMASSHVARQGNSQDGIVWTAGANVYSQQARAIANALAARQSQSISSQNQTCVAATCFTADSFWGLTGEQRGPPVQAVSSTDELFNSQPDQNWRPTRMRGSLSGQQLTEDVRQRLIMPSSHQVQSSRPQGPQPGRPTSPLDALIANNRNAQNPSRP