Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22471.t1 | XP_003625573.1 | 98.2 | 328 | 6 | 0 | 1 | 328 | 143 | 470 | 8.10E-187 | 662.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22471.t1 | C0LGI2 | 55.4 | 334 | 145 | 2 | 1 | 331 | 138 | 470 | 2.6e-101 | 370.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22471.t1 | G7L1Q0 | 98.2 | 328 | 6 | 0 | 1 | 328 | 143 | 470 | 5.9e-187 | 662.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene22471 | 0.81743 | 3.31E-52 | -1.69E-46 |
| MS.gene049989 | MS.gene22471 | 0.802731 | 4.88E-49 | -1.69E-46 |
| MS.gene056228 | MS.gene22471 | 0.809449 | 1.88E-50 | -1.69E-46 |
| MS.gene058823 | MS.gene22471 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene22471 | 0.817618 | 3.00E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22471.t1 | MTR_7g100630 | 98.291 | 351 | 6 | 0 | 1 | 351 | 143 | 493 | 0.0 | 719 |
| MS.gene22471.t1 | MTR_1g066950 | 82.436 | 353 | 60 | 1 | 1 | 351 | 137 | 489 | 0.0 | 613 |
| MS.gene22471.t1 | MTR_3g086120 | 54.802 | 354 | 155 | 2 | 1 | 351 | 138 | 489 | 2.37e-129 | 390 |
| MS.gene22471.t1 | MTR_3g086120 | 54.802 | 354 | 155 | 2 | 1 | 351 | 138 | 489 | 2.41e-128 | 390 |
| MS.gene22471.t1 | MTR_6g034775 | 70.922 | 141 | 41 | 0 | 61 | 201 | 6 | 146 | 5.22e-66 | 207 |
| MS.gene22471.t1 | MTR_8g015150 | 33.803 | 355 | 202 | 13 | 1 | 342 | 139 | 473 | 7.40e-42 | 154 |
| MS.gene22471.t1 | MTR_8g015150 | 33.803 | 355 | 202 | 13 | 1 | 342 | 139 | 473 | 8.34e-42 | 155 |
| MS.gene22471.t1 | MTR_8g015150 | 33.803 | 355 | 202 | 13 | 1 | 342 | 139 | 473 | 1.88e-41 | 154 |
| MS.gene22471.t1 | MTR_8g014690 | 31.755 | 359 | 203 | 11 | 1 | 342 | 150 | 483 | 1.83e-38 | 145 |
| MS.gene22471.t1 | MTR_8g014730 | 30.791 | 354 | 205 | 11 | 3 | 342 | 150 | 477 | 1.88e-38 | 145 |
| MS.gene22471.t1 | MTR_8g014690 | 31.755 | 359 | 203 | 11 | 1 | 342 | 143 | 476 | 2.49e-38 | 145 |
| MS.gene22471.t1 | MTR_6g071455 | 29.888 | 358 | 206 | 15 | 3 | 344 | 135 | 463 | 7.14e-38 | 142 |
| MS.gene22471.t1 | MTR_8g015190 | 32.410 | 361 | 204 | 15 | 1 | 342 | 154 | 493 | 9.89e-38 | 144 |
| MS.gene22471.t1 | MTR_8g015190 | 32.410 | 361 | 204 | 15 | 1 | 342 | 164 | 503 | 1.08e-37 | 144 |
| MS.gene22471.t1 | MTR_8g014700 | 33.333 | 360 | 193 | 15 | 3 | 342 | 150 | 482 | 1.89e-37 | 142 |
| MS.gene22471.t1 | MTR_8g014790 | 30.726 | 358 | 205 | 11 | 3 | 342 | 147 | 479 | 2.31e-37 | 143 |
| MS.gene22471.t1 | MTR_8g014700 | 33.149 | 362 | 191 | 15 | 3 | 342 | 150 | 482 | 2.67e-37 | 142 |
| MS.gene22471.t1 | MTR_8g014700 | 33.149 | 362 | 191 | 15 | 3 | 342 | 150 | 482 | 2.70e-37 | 142 |
| MS.gene22471.t1 | MTR_6g071455 | 29.888 | 358 | 206 | 15 | 3 | 344 | 135 | 463 | 3.67e-37 | 141 |
| MS.gene22471.t1 | MTR_8g015340 | 33.628 | 339 | 172 | 14 | 3 | 318 | 159 | 467 | 4.79e-37 | 142 |
| MS.gene22471.t1 | MTR_2g100470 | 32.493 | 357 | 194 | 13 | 2 | 342 | 133 | 458 | 1.58e-35 | 137 |
| MS.gene22471.t1 | MTR_4g086250 | 32.222 | 360 | 210 | 16 | 3 | 351 | 152 | 488 | 2.10e-35 | 135 |
| MS.gene22471.t1 | MTR_8g015200 | 29.609 | 358 | 209 | 11 | 1 | 342 | 125 | 455 | 3.89e-35 | 136 |
| MS.gene22471.t1 | MTR_8g461120 | 31.638 | 354 | 214 | 13 | 1 | 342 | 158 | 495 | 4.32e-35 | 136 |
| MS.gene22471.t1 | MTR_8g461120 | 31.638 | 354 | 214 | 13 | 1 | 342 | 158 | 495 | 4.34e-35 | 135 |
| MS.gene22471.t1 | MTR_8g014930 | 32.240 | 366 | 187 | 17 | 3 | 342 | 149 | 479 | 1.04e-34 | 134 |
| MS.gene22471.t1 | MTR_8g014930 | 31.694 | 366 | 189 | 16 | 3 | 342 | 144 | 474 | 1.05e-34 | 135 |
| MS.gene22471.t1 | MTR_8g014930 | 32.240 | 366 | 187 | 17 | 3 | 342 | 149 | 479 | 1.10e-34 | 135 |
| MS.gene22471.t1 | MTR_8g014930 | 32.240 | 366 | 187 | 17 | 3 | 342 | 149 | 479 | 1.11e-34 | 134 |
| MS.gene22471.t1 | MTR_2g100450 | 31.742 | 356 | 202 | 13 | 2 | 342 | 147 | 476 | 1.18e-34 | 135 |
| MS.gene22471.t1 | MTR_2g100450 | 31.742 | 356 | 202 | 13 | 2 | 342 | 147 | 476 | 1.62e-34 | 134 |
| MS.gene22471.t1 | MTR_1g104850 | 32.520 | 369 | 193 | 17 | 3 | 351 | 141 | 473 | 4.04e-34 | 131 |
| MS.gene22471.t1 | MTR_8g028110 | 30.337 | 356 | 214 | 12 | 2 | 342 | 149 | 485 | 1.44e-32 | 129 |
| MS.gene22471.t1 | MTR_6g090615 | 34.262 | 359 | 189 | 16 | 3 | 342 | 151 | 481 | 8.61e-32 | 126 |
| MS.gene22471.t1 | MTR_8g014760 | 30.398 | 352 | 206 | 16 | 3 | 339 | 148 | 475 | 1.21e-31 | 125 |
| MS.gene22471.t1 | MTR_8g014760 | 30.398 | 352 | 206 | 16 | 3 | 339 | 148 | 475 | 1.96e-31 | 125 |
| MS.gene22471.t1 | MTR_8g014760 | 30.398 | 352 | 206 | 16 | 3 | 339 | 148 | 475 | 2.30e-31 | 125 |
| MS.gene22471.t1 | MTR_8g014760 | 30.398 | 352 | 206 | 16 | 3 | 339 | 144 | 471 | 3.08e-31 | 125 |
| MS.gene22471.t1 | MTR_8g015010 | 29.891 | 368 | 214 | 11 | 3 | 342 | 169 | 520 | 1.08e-30 | 123 |
| MS.gene22471.t1 | MTR_8g461120 | 28.814 | 354 | 200 | 14 | 1 | 342 | 158 | 471 | 3.02e-26 | 110 |
| MS.gene22471.t1 | MTR_8g015040 | 28.610 | 367 | 227 | 9 | 3 | 345 | 179 | 534 | 5.20e-24 | 103 |
| MS.gene22471.t1 | MTR_8g015150 | 33.333 | 237 | 138 | 9 | 117 | 342 | 1 | 228 | 8.44e-24 | 102 |
| MS.gene22471.t1 | MTR_5g030920 | 28.495 | 372 | 212 | 15 | 3 | 351 | 143 | 483 | 1.30e-21 | 96.7 |
| MS.gene22471.t1 | MTR_2g100450 | 29.795 | 292 | 168 | 12 | 66 | 342 | 2 | 271 | 4.80e-21 | 94.7 |
| MS.gene22471.t1 | MTR_5g058090 | 27.901 | 362 | 210 | 12 | 3 | 342 | 161 | 493 | 1.37e-20 | 93.6 |
| MS.gene22471.t1 | MTR_5g030920 | 27.151 | 372 | 194 | 16 | 3 | 351 | 143 | 460 | 1.22e-19 | 90.9 |
| MS.gene22471.t1 | MTR_8g014970 | 30.693 | 202 | 126 | 4 | 146 | 342 | 53 | 245 | 1.17e-18 | 87.4 |
| MS.gene22471.t1 | MTR_7g057170 | 25.131 | 382 | 225 | 17 | 1 | 351 | 138 | 489 | 2.74e-16 | 80.5 |
| MS.gene22471.t1 | MTR_7g057170 | 25.131 | 382 | 225 | 17 | 1 | 351 | 138 | 489 | 2.94e-16 | 80.5 |
| MS.gene22471.t1 | MTR_8g015100 | 38.028 | 142 | 77 | 6 | 209 | 342 | 29 | 167 | 9.27e-15 | 75.9 |
| MS.gene22471.t1 | MTR_8g015100 | 38.028 | 142 | 77 | 6 | 209 | 342 | 246 | 384 | 1.04e-14 | 75.9 |
| MS.gene22471.t1 | MTR_8g014840 | 29.878 | 164 | 103 | 2 | 2 | 163 | 126 | 279 | 3.94e-14 | 72.8 |
| MS.gene22471.t1 | MTR_1g093630 | 28.333 | 360 | 219 | 16 | 6 | 344 | 160 | 501 | 1.50e-13 | 72.0 |
| MS.gene22471.t1 | MTR_6g090605 | 30.568 | 229 | 128 | 6 | 3 | 223 | 160 | 365 | 1.98e-13 | 71.2 |
| MS.gene22471.t1 | MTR_7g106210 | 34.653 | 101 | 63 | 1 | 251 | 351 | 45 | 142 | 1.85e-11 | 65.9 |
| MS.gene22471.t1 | MTR_5g009660 | 41.860 | 86 | 48 | 2 | 264 | 348 | 59 | 143 | 1.93e-11 | 65.5 |
| MS.gene22471.t1 | MTR_8g101260 | 37.069 | 116 | 63 | 3 | 232 | 347 | 115 | 220 | 2.98e-11 | 65.1 |
| MS.gene22471.t1 | MTR_8g099195 | 32.283 | 127 | 57 | 3 | 250 | 351 | 41 | 163 | 4.60e-11 | 64.3 |
| MS.gene22471.t1 | MTR_0049s0070 | 32.394 | 142 | 65 | 4 | 235 | 348 | 31 | 169 | 5.05e-11 | 64.3 |
| MS.gene22471.t1 | MTR_7g023730 | 46.753 | 77 | 40 | 1 | 276 | 351 | 224 | 300 | 5.60e-11 | 63.5 |
| MS.gene22471.t1 | MTR_8g095030 | 34.951 | 103 | 61 | 3 | 250 | 351 | 56 | 153 | 7.74e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22471.t1 | AT2G37050 | 69.429 | 350 | 106 | 1 | 3 | 351 | 141 | 490 | 1.39e-179 | 515 |
| MS.gene22471.t1 | AT2G37050 | 69.429 | 350 | 106 | 1 | 3 | 351 | 141 | 490 | 1.57e-179 | 515 |
| MS.gene22471.t1 | AT2G37050 | 69.429 | 350 | 106 | 1 | 3 | 351 | 141 | 490 | 1.65e-177 | 517 |
| MS.gene22471.t1 | AT2G37050 | 69.429 | 350 | 106 | 1 | 3 | 351 | 141 | 490 | 1.68e-177 | 517 |
| MS.gene22471.t1 | AT1G67720 | 55.650 | 354 | 153 | 2 | 1 | 351 | 138 | 490 | 4.34e-129 | 392 |
| MS.gene22471.t1 | AT1G05700 | 32.394 | 355 | 204 | 12 | 2 | 342 | 145 | 477 | 5.25e-38 | 145 |
| MS.gene22471.t1 | AT1G05700 | 32.394 | 355 | 204 | 12 | 2 | 342 | 145 | 477 | 6.44e-38 | 144 |
| MS.gene22471.t1 | AT3G19230 | 31.956 | 363 | 209 | 15 | 3 | 351 | 137 | 475 | 9.51e-37 | 139 |
| MS.gene22471.t1 | AT1G51790 | 33.333 | 363 | 192 | 16 | 2 | 342 | 146 | 480 | 5.71e-36 | 139 |
| MS.gene22471.t1 | AT1G51790 | 33.333 | 363 | 192 | 16 | 2 | 342 | 146 | 480 | 5.71e-36 | 139 |
| MS.gene22471.t1 | AT1G51790 | 33.333 | 363 | 192 | 16 | 2 | 342 | 146 | 480 | 5.95e-36 | 139 |
| MS.gene22471.t1 | AT2G14510 | 31.667 | 360 | 205 | 12 | 1 | 344 | 147 | 481 | 4.91e-35 | 136 |
| MS.gene22471.t1 | AT2G14510 | 31.667 | 360 | 205 | 12 | 1 | 344 | 155 | 489 | 5.80e-35 | 136 |
| MS.gene22471.t1 | AT3G05990 | 29.589 | 365 | 212 | 12 | 3 | 351 | 146 | 481 | 6.19e-35 | 134 |
| MS.gene22471.t1 | AT1G51880 | 31.534 | 352 | 210 | 12 | 3 | 342 | 165 | 497 | 7.35e-35 | 135 |
| MS.gene22471.t1 | AT1G51880 | 31.534 | 352 | 210 | 12 | 3 | 342 | 147 | 479 | 7.62e-35 | 135 |
| MS.gene22471.t1 | AT1G51800 | 29.330 | 358 | 209 | 11 | 3 | 342 | 145 | 476 | 1.04e-34 | 135 |
| MS.gene22471.t1 | AT2G28990 | 31.025 | 361 | 200 | 13 | 2 | 342 | 142 | 473 | 5.00e-34 | 133 |
| MS.gene22471.t1 | AT2G28990 | 31.025 | 361 | 200 | 13 | 2 | 342 | 142 | 473 | 5.00e-34 | 133 |
| MS.gene22471.t1 | AT2G19210 | 32.493 | 357 | 200 | 15 | 2 | 342 | 150 | 481 | 6.45e-34 | 133 |
| MS.gene22471.t1 | AT2G19230 | 33.426 | 359 | 196 | 16 | 2 | 342 | 149 | 482 | 9.48e-34 | 132 |
| MS.gene22471.t1 | AT2G19230 | 32.584 | 356 | 203 | 14 | 2 | 342 | 149 | 482 | 1.15e-33 | 132 |
| MS.gene22471.t1 | AT1G51880 | 31.657 | 338 | 201 | 11 | 3 | 329 | 165 | 483 | 1.29e-33 | 132 |
| MS.gene22471.t1 | AT1G51860 | 31.445 | 353 | 193 | 10 | 1 | 332 | 1 | 325 | 2.68e-33 | 130 |
| MS.gene22471.t1 | AT1G51860 | 31.728 | 353 | 192 | 10 | 1 | 332 | 145 | 469 | 2.89e-33 | 131 |
| MS.gene22471.t1 | AT1G51890 | 32.033 | 359 | 199 | 13 | 3 | 342 | 143 | 475 | 4.23e-33 | 130 |
| MS.gene22471.t1 | AT1G51890 | 32.033 | 359 | 199 | 13 | 3 | 342 | 143 | 475 | 4.26e-33 | 130 |
| MS.gene22471.t1 | AT1G51890 | 32.033 | 359 | 199 | 13 | 3 | 342 | 143 | 475 | 4.36e-33 | 130 |
| MS.gene22471.t1 | AT2G14440 | 29.589 | 365 | 206 | 13 | 1 | 344 | 148 | 482 | 7.22e-32 | 127 |
| MS.gene22471.t1 | AT1G51805 | 31.856 | 361 | 200 | 14 | 1 | 342 | 138 | 471 | 1.62e-31 | 125 |
| MS.gene22471.t1 | AT2G28960 | 32.597 | 362 | 193 | 17 | 2 | 342 | 13 | 344 | 3.56e-31 | 124 |
| MS.gene22471.t1 | AT2G28970 | 30.726 | 358 | 203 | 13 | 3 | 342 | 11 | 341 | 4.16e-31 | 124 |
| MS.gene22471.t1 | AT2G19190 | 28.649 | 370 | 199 | 13 | 2 | 342 | 149 | 482 | 4.51e-31 | 124 |
| MS.gene22471.t1 | AT2G28960 | 32.597 | 362 | 193 | 17 | 2 | 342 | 145 | 476 | 6.23e-31 | 124 |
| MS.gene22471.t1 | AT1G51890 | 33.531 | 337 | 179 | 14 | 25 | 342 | 101 | 411 | 1.59e-30 | 123 |
| MS.gene22471.t1 | AT1G51810 | 29.650 | 371 | 210 | 12 | 1 | 349 | 11 | 352 | 2.00e-30 | 122 |
| MS.gene22471.t1 | AT5G59680 | 30.685 | 365 | 194 | 17 | 3 | 342 | 148 | 478 | 3.35e-30 | 122 |
| MS.gene22471.t1 | AT1G07550 | 30.163 | 368 | 197 | 15 | 1 | 342 | 145 | 478 | 4.77e-30 | 121 |
| MS.gene22471.t1 | AT3G46370 | 30.278 | 360 | 204 | 13 | 2 | 342 | 59 | 390 | 6.16e-30 | 121 |
| MS.gene22471.t1 | AT3G46370 | 30.278 | 360 | 204 | 13 | 2 | 342 | 59 | 390 | 6.16e-30 | 121 |
| MS.gene22471.t1 | AT4G29990 | 29.609 | 358 | 209 | 15 | 2 | 342 | 146 | 477 | 6.25e-30 | 121 |
| MS.gene22471.t1 | AT4G29990 | 29.609 | 358 | 209 | 15 | 2 | 342 | 146 | 477 | 6.67e-30 | 121 |
| MS.gene22471.t1 | AT3G46340 | 31.507 | 365 | 195 | 14 | 1 | 342 | 149 | 481 | 2.14e-29 | 119 |
| MS.gene22471.t1 | AT5G59670 | 28.056 | 360 | 212 | 14 | 3 | 342 | 146 | 478 | 8.42e-29 | 118 |
| MS.gene22471.t1 | AT5G59670 | 28.056 | 360 | 212 | 14 | 3 | 342 | 146 | 478 | 8.42e-29 | 118 |
| MS.gene22471.t1 | AT3G46400 | 29.810 | 369 | 197 | 15 | 3 | 344 | 148 | 481 | 1.38e-28 | 117 |
| MS.gene22471.t1 | AT1G51870 | 29.722 | 360 | 211 | 13 | 1 | 342 | 145 | 480 | 3.02e-28 | 116 |
| MS.gene22471.t1 | AT3G46420 | 31.476 | 359 | 203 | 16 | 3 | 344 | 148 | 480 | 3.69e-28 | 116 |
| MS.gene22471.t1 | AT3G21340 | 30.728 | 371 | 205 | 15 | 1 | 349 | 149 | 489 | 9.62e-28 | 114 |
| MS.gene22471.t1 | AT3G21340 | 30.728 | 371 | 205 | 15 | 1 | 349 | 149 | 489 | 1.50e-27 | 114 |
| MS.gene22471.t1 | AT4G29450 | 31.180 | 356 | 207 | 13 | 2 | 342 | 149 | 481 | 2.63e-27 | 113 |
| MS.gene22471.t1 | AT5G59650 | 30.387 | 362 | 204 | 16 | 1 | 342 | 146 | 479 | 5.57e-27 | 112 |
| MS.gene22471.t1 | AT5G16900 | 29.787 | 376 | 211 | 15 | 1 | 349 | 140 | 489 | 5.90e-27 | 112 |
| MS.gene22471.t1 | AT5G16900 | 29.787 | 376 | 211 | 15 | 1 | 349 | 140 | 489 | 5.90e-27 | 112 |
| MS.gene22471.t1 | AT4G29180 | 31.564 | 358 | 203 | 14 | 1 | 342 | 149 | 480 | 6.80e-27 | 112 |
| MS.gene22471.t1 | AT1G49100 | 30.110 | 362 | 217 | 12 | 3 | 349 | 148 | 488 | 6.93e-27 | 112 |
| MS.gene22471.t1 | AT5G16900 | 29.787 | 376 | 211 | 15 | 1 | 349 | 140 | 489 | 6.95e-27 | 112 |
| MS.gene22471.t1 | AT4G29180 | 31.564 | 358 | 203 | 14 | 1 | 342 | 149 | 480 | 7.20e-27 | 112 |
| MS.gene22471.t1 | AT2G29000 | 28.926 | 363 | 203 | 17 | 3 | 342 | 144 | 474 | 9.72e-27 | 112 |
| MS.gene22471.t1 | AT1G51805 | 29.917 | 361 | 183 | 13 | 1 | 342 | 138 | 447 | 3.17e-26 | 110 |
| MS.gene22471.t1 | AT2G28970 | 30.530 | 321 | 181 | 12 | 40 | 342 | 80 | 376 | 8.50e-26 | 108 |
| MS.gene22471.t1 | AT5G59650 | 30.000 | 370 | 203 | 17 | 1 | 342 | 146 | 487 | 1.08e-25 | 108 |
| MS.gene22471.t1 | AT1G51850 | 28.415 | 366 | 205 | 14 | 1 | 342 | 138 | 470 | 1.46e-25 | 108 |
| MS.gene22471.t1 | AT4G20450 | 27.747 | 364 | 224 | 12 | 1 | 345 | 158 | 501 | 8.83e-24 | 103 |
| MS.gene22471.t1 | AT4G20450 | 27.747 | 364 | 224 | 12 | 1 | 345 | 158 | 501 | 1.15e-23 | 102 |
| MS.gene22471.t1 | AT1G07560 | 29.945 | 364 | 204 | 17 | 3 | 344 | 148 | 482 | 2.09e-23 | 102 |
| MS.gene22471.t1 | AT1G51910 | 28.378 | 370 | 203 | 14 | 3 | 344 | 147 | 482 | 2.28e-23 | 102 |
| MS.gene22471.t1 | AT1G51850 | 28.895 | 353 | 194 | 14 | 14 | 342 | 131 | 450 | 3.96e-23 | 101 |
| MS.gene22471.t1 | AT2G04300 | 28.610 | 367 | 216 | 14 | 2 | 349 | 151 | 490 | 5.51e-23 | 100 |
| MS.gene22471.t1 | AT4G29180 | 29.752 | 363 | 201 | 14 | 1 | 342 | 149 | 478 | 1.26e-22 | 99.8 |
| MS.gene22471.t1 | AT1G51870 | 28.125 | 320 | 190 | 11 | 1 | 304 | 145 | 440 | 4.71e-22 | 98.2 |
| MS.gene22471.t1 | AT1G51820 | 27.989 | 368 | 204 | 14 | 1 | 342 | 138 | 470 | 2.54e-21 | 95.9 |
| MS.gene22471.t1 | AT1G51890 | 35.047 | 214 | 110 | 9 | 146 | 342 | 2 | 203 | 2.93e-20 | 92.4 |
| MS.gene22471.t1 | AT5G48740 | 26.016 | 369 | 218 | 14 | 1 | 341 | 131 | 472 | 5.80e-20 | 91.7 |
| MS.gene22471.t1 | AT3G46330 | 26.462 | 359 | 226 | 13 | 1 | 344 | 147 | 482 | 9.75e-20 | 91.3 |
| MS.gene22471.t1 | AT5G16900 | 30.000 | 310 | 168 | 14 | 67 | 349 | 16 | 303 | 2.05e-18 | 87.0 |
| MS.gene22471.t1 | AT3G46330 | 26.667 | 330 | 205 | 12 | 1 | 316 | 147 | 453 | 3.28e-16 | 80.5 |
| MS.gene22471.t1 | AT5G59660 | 26.667 | 330 | 180 | 14 | 35 | 342 | 129 | 418 | 7.74e-16 | 79.3 |
| MS.gene22471.t1 | AT1G28340 | 26.344 | 372 | 231 | 18 | 4 | 351 | 146 | 498 | 1.72e-15 | 78.2 |
| MS.gene22471.t1 | AT5G59660 | 25.836 | 329 | 181 | 14 | 35 | 342 | 107 | 393 | 2.00e-14 | 75.1 |
| MS.gene22471.t1 | AT5G59660 | 25.836 | 329 | 181 | 14 | 35 | 342 | 129 | 415 | 2.85e-14 | 74.7 |
| MS.gene22471.t1 | AT1G51830 | 27.425 | 299 | 182 | 10 | 66 | 349 | 17 | 295 | 2.66e-12 | 68.6 |
| MS.gene22471.t1 | AT1G51830 | 27.425 | 299 | 182 | 10 | 66 | 349 | 10 | 288 | 2.90e-12 | 68.2 |
| MS.gene22471.t1 | AT1G66150 | 43.243 | 74 | 41 | 1 | 276 | 349 | 210 | 282 | 3.07e-11 | 65.1 |
Find 84 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAACATACCGGTTGAATT+TGG | 0.203406 | 7.4:-9661205 | MS.gene22471:CDS |
| AATATTGAAGAAAATGCTTT+TGG | 0.239099 | 7.4:-9661057 | MS.gene22471:CDS |
| CTTTACATTGAAATTATTCT+TGG | 0.248193 | 7.4:+9660572 | None:intergenic |
| ACAATAGCCTTGCTAATTTC+AGG | 0.250122 | 7.4:+9661081 | None:intergenic |
| TTGAATTTGGATGGGTTTCC+TGG | 0.251437 | 7.4:-9661192 | MS.gene22471:CDS |
| TCCTTCAGATATTACCAAAA+TGG | 0.251706 | 7.4:-9660407 | MS.gene22471:CDS |
| TTCAACCAAACCAACCATTT+TGG | 0.260196 | 7.4:+9660393 | None:intergenic |
| GGGTGTCTTGGCAAATTTAA+AGG | 0.268031 | 7.4:+9660978 | None:intergenic |
| GTCTCTGCAAGGATCAATTT+TGG | 0.289396 | 7.4:-9661512 | MS.gene22471:CDS |
| TTTGCAGTTGAAGCTATTTC+CGG | 0.295534 | 7.4:-9660695 | MS.gene22471:intron |
| CGGTGTGCTACCGGCCTCTT+TGG | 0.334870 | 7.4:-9660108 | MS.gene22471:CDS |
| CTCACTATTCTTCAGCAAAC+TGG | 0.343245 | 7.4:-9660664 | MS.gene22471:CDS |
| ATGGGTTTCCTGGCAATGCT+TGG | 0.358898 | 7.4:-9661182 | MS.gene22471:CDS |
| GACTCCCAAATTCTATCAAA+AGG | 0.362259 | 7.4:+9661372 | None:intergenic |
| TATTACCAAAATGGTTGGTT+TGG | 0.370589 | 7.4:-9660398 | MS.gene22471:CDS |
| AGTTCAAGCGTAGATATAAA+AGG | 0.373012 | 7.4:+9661593 | None:intergenic |
| TGTGGTGGCAGCTTGTTATC+CGG | 0.376847 | 7.4:-9660451 | MS.gene22471:intron |
| TTGCTAATTTCAGGCTGGCC+TGG | 0.390823 | 7.4:+9661090 | None:intergenic |
| CAAACGAGTCTAGAAAATTC+AGG | 0.396943 | 7.4:-9661122 | MS.gene22471:CDS |
| TGGGTTTCCTGGCAATGCTT+GGG | 0.398084 | 7.4:-9661181 | MS.gene22471:CDS |
| TACAAAAGGTAGGGATAGAT+TGG | 0.400912 | 7.4:+9661005 | None:intergenic |
| GAAATATCGCCTTTATGAAC+CGG | 0.402785 | 7.4:-9661034 | MS.gene22471:CDS |
| ATTGAAATTATTCTTGGTTG+TGG | 0.403247 | 7.4:+9660578 | None:intergenic |
| CACCCGGTAAAATCTGGTAT+TGG | 0.405546 | 7.4:+9660250 | None:intergenic |
| CGCATTTACGAGAGGTCCCT+TGG | 0.406497 | 7.4:+9660948 | None:intergenic |
| CTTGAACTTCGACAATTCAA+TGG | 0.418526 | 7.4:-9661578 | MS.gene22471:CDS |
| TATCTTGTTGATGTTGCTGC+TGG | 0.426913 | 7.4:-9661327 | MS.gene22471:CDS |
| TGTTTATCAAATGCAACAAC+TGG | 0.430170 | 7.4:-9661620 | MS.gene22471:CDS |
| ATTCTATCAAAAGGGTCATC+AGG | 0.432265 | 7.4:+9661381 | None:intergenic |
| ACCCGGTAAAATCTGGTATT+GGG | 0.434608 | 7.4:+9660251 | None:intergenic |
| GTCTTCCTGTTCCATGGTCA+TGG | 0.443300 | 7.4:-9660619 | MS.gene22471:CDS |
| TGGCGAACCTTCCGAGTTTG+AGG | 0.448051 | 7.4:-9660088 | MS.gene22471:CDS |
| TCCATGCACCCGGTAAAATC+TGG | 0.451087 | 7.4:+9660244 | None:intergenic |
| GGCGAACCTTCCGAGTTTGA+GGG | 0.453579 | 7.4:-9660087 | MS.gene22471:CDS |
| TAAAGGAGAGTACAAAAGGT+AGG | 0.457533 | 7.4:+9660995 | None:intergenic |
| ACATACCGGTTGAATTTGGA+TGG | 0.459232 | 7.4:-9661201 | MS.gene22471:CDS |
| GAGAGGTCCCTTGGATGAAT+CGG | 0.460818 | 7.4:+9660957 | None:intergenic |
| CGGAGACTGATGCTCCAATC+AGG | 0.460924 | 7.4:-9661487 | MS.gene22471:intron |
| ACAGCCGTAGTCGGTACAAA+TGG | 0.463049 | 7.4:-9661231 | MS.gene22471:CDS |
| TGGTAAATCCCGGTTCATAA+AGG | 0.464775 | 7.4:+9661025 | None:intergenic |
| CATGGATGCAGATGGCTTGA+TGG | 0.465334 | 7.4:-9660289 | MS.gene22471:intron |
| CGGATCCATGACCATGGAAC+AGG | 0.466235 | 7.4:+9660614 | None:intergenic |
| ATCCATGTCTTCCTGTTCCA+TGG | 0.479303 | 7.4:-9660625 | MS.gene22471:CDS |
| CTTGGATGAATCGGGTGTCT+TGG | 0.481194 | 7.4:+9660966 | None:intergenic |
| GCTGTCTGCATCACTTTCAC+TGG | 0.489738 | 7.4:+9661249 | None:intergenic |
| TCAGTTCAACGGTGTGCTAC+CGG | 0.490900 | 7.4:-9660117 | MS.gene22471:CDS |
| TCAGATATTACCAAAATGGT+TGG | 0.509222 | 7.4:-9660403 | MS.gene22471:CDS |
| GTGGTGGCAGCTTGTTATCC+GGG | 0.511203 | 7.4:-9660450 | MS.gene22471:intron |
| AATGGATTAAGGTACCTGAT+TGG | 0.512177 | 7.4:+9661473 | None:intergenic |
| AATTTAAAGGAGAGTACAAA+AGG | 0.514942 | 7.4:+9660991 | None:intergenic |
| TGATCCTTGCAGAGACACTA+AGG | 0.515724 | 7.4:+9661519 | None:intergenic |
| GAAACCCATCCAAATTCAAC+CGG | 0.517973 | 7.4:+9661196 | None:intergenic |
| ACTCCCAAATTCTATCAAAA+GGG | 0.522268 | 7.4:+9661373 | None:intergenic |
| AAAGGAGAGTACAAAAGGTA+GGG | 0.525115 | 7.4:+9660996 | None:intergenic |
| GTGACTGCCCAAGCATTGCC+AGG | 0.528649 | 7.4:+9661174 | None:intergenic |
| AGAGGTCCCTTGGATGAATC+GGG | 0.531836 | 7.4:+9660958 | None:intergenic |
| GGAAGGTTCGCCAAAGAGGC+CGG | 0.538959 | 7.4:+9660098 | None:intergenic |
| AGATCCATTTGTACCGACTA+CGG | 0.556234 | 7.4:+9661227 | None:intergenic |
| GGTAAAATCTGGTATTGGGC+CGG | 0.563684 | 7.4:+9660255 | None:intergenic |
| TAGCCTTGCTAATTTCAGGC+TGG | 0.570437 | 7.4:+9661085 | None:intergenic |
| CAAATGGATCTCTAACATAC+CGG | 0.577319 | 7.4:-9661215 | MS.gene22471:CDS |
| AGGGATAGATTGGTAAATCC+CGG | 0.577874 | 7.4:+9661015 | None:intergenic |
| GTCTGCATCACTTTCACTGG+TGG | 0.579368 | 7.4:+9661252 | None:intergenic |
| AAATATCGCCTTTATGAACC+GGG | 0.581128 | 7.4:-9661033 | MS.gene22471:CDS |
| GACCATGGAACAGGAAGACA+TGG | 0.585625 | 7.4:+9660623 | None:intergenic |
| CAAGACACCCGATTCATCCA+AGG | 0.586611 | 7.4:-9660965 | MS.gene22471:CDS |
| CATACCGGTTGAATTTGGAT+GGG | 0.587141 | 7.4:-9661200 | MS.gene22471:CDS |
| ACTCGGAAGGTTCGCCAAAG+AGG | 0.588547 | 7.4:+9660094 | None:intergenic |
| TCAGCAAACTGGACACAAGA+AGG | 0.588692 | 7.4:-9660653 | MS.gene22471:CDS |
| CTTGAAAATAATCAGTTCAA+CGG | 0.590454 | 7.4:-9660128 | MS.gene22471:CDS |
| ATCTCCATCGCATTTACGAG+AGG | 0.595194 | 7.4:+9660940 | None:intergenic |
| GGGACCTCTCGTAAATGCGA+TGG | 0.595920 | 7.4:-9660944 | MS.gene22471:CDS |
| CTTGATGGAAATATGTTGAC+CGG | 0.605708 | 7.4:-9660274 | MS.gene22471:CDS |
| ACAGTTCCCTCAAACTCGGA+AGG | 0.607570 | 7.4:+9660081 | None:intergenic |
| ACTTACAGTTCCCTCAAACT+CGG | 0.609163 | 7.4:+9660077 | None:intergenic |
| TTTACCTTAGTGTCTCTGCA+AGG | 0.612572 | 7.4:-9661523 | MS.gene22471:CDS |
| GATCTTTAAGTCCATGCACC+CGG | 0.623234 | 7.4:+9660234 | None:intergenic |
| GTGATGCAGACAGCCGTAGT+CGG | 0.650050 | 7.4:-9661240 | MS.gene22471:CDS |
| AAGACACCCGATTCATCCAA+GGG | 0.650509 | 7.4:-9660964 | MS.gene22471:CDS |
| AGGCCAGCCTGAAATTAGCA+AGG | 0.654509 | 7.4:-9661088 | MS.gene22471:CDS |
| CTACAGCGGATCCATGACCA+TGG | 0.679698 | 7.4:+9660608 | None:intergenic |
| GCAAACTGGACACAAGAAGG+AGG | 0.681422 | 7.4:-9660650 | MS.gene22471:CDS |
| AGAATAGTGAGAAAGCACTC+CGG | 0.687580 | 7.4:+9660676 | None:intergenic |
| GTTGTGGATCTGAGCTACAG+CGG | 0.691673 | 7.4:+9660594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCCATTTAATAAATATGT+TGG | - | chr7.4:9660947-9660966 | MS.gene22471:CDS | 15.0% |
| !! | AATTATAATTTATGTTGTTG+AGG | - | chr7.4:9661017-9661036 | MS.gene22471:CDS | 15.0% |
| !! | ATTATAATTTATGTTGTTGA+GGG | - | chr7.4:9661018-9661037 | MS.gene22471:CDS | 15.0% |
| !! | CAAGAATAATTTCAATGTAA+AGG | - | chr7.4:9661173-9661192 | MS.gene22471:CDS | 20.0% |
| !! | CATCCAACATATTTATTAAA+TGG | + | chr7.4:9660953-9660972 | None:intergenic | 20.0% |
| !! | CTTTACATTGAAATTATTCT+TGG | + | chr7.4:9661175-9661194 | None:intergenic | 20.0% |
| !! | TCATCTCTATTAACAAAAAT+TGG | + | chr7.4:9660468-9660487 | None:intergenic | 20.0% |
| !!! | AATATTGAAGAAAATGCTTT+TGG | - | chr7.4:9660687-9660706 | MS.gene22471:CDS | 20.0% |
| !!! | ATATTGAAGAAAATGCTTTT+GGG | - | chr7.4:9660688-9660707 | MS.gene22471:CDS | 20.0% |
| ! | ATTAACAAAAATTGGTACAG+AGG | + | chr7.4:9660460-9660479 | None:intergenic | 25.0% |
| ! | ATTGAAATTATTCTTGGTTG+TGG | + | chr7.4:9661169-9661188 | None:intergenic | 25.0% |
| ! | CTTGAAAATAATCAGTTCAA+CGG | - | chr7.4:9661616-9661635 | MS.gene22471:CDS | 25.0% |
| ! | TATGATCATGAAATGTTGTT+TGG | - | chr7.4:9660898-9660917 | MS.gene22471:intron | 25.0% |
| !! | AATTTAAAGGAGAGTACAAA+AGG | + | chr7.4:9660756-9660775 | None:intergenic | 25.0% |
| !! | TAGTGGTGTAATTTTATTCA+TGG | - | chr7.4:9661437-9661456 | MS.gene22471:intron | 25.0% |
| !! | TGTAAAGGTTAATCTTTTTG+AGG | - | chr7.4:9661188-9661207 | MS.gene22471:CDS | 25.0% |
| !!! | GTTTTAATTATGCCTATATG+TGG | - | chr7.4:9661210-9661229 | MS.gene22471:CDS | 25.0% |
| AAAACCAGCAAGATAAAGAA+TGG | + | chr7.4:9660292-9660311 | None:intergenic | 30.0% | |
| AAGTATCTTGAGAAAAACGA+CGG | - | chr7.4:9660831-9660850 | MS.gene22471:intron | 30.0% | |
| ACTCCCAAATTCTATCAAAA+GGG | + | chr7.4:9660374-9660393 | None:intergenic | 30.0% | |
| AGGAAAAGGTTTCAATTAAC+TGG | + | chr7.4:9661585-9661604 | None:intergenic | 30.0% | |
| AGTTCAAGCGTAGATATAAA+AGG | + | chr7.4:9660154-9660173 | None:intergenic | 30.0% | |
| ATTGGTAAAGGAGAAATGTA+AGG | - | chr7.4:9661243-9661262 | MS.gene22471:CDS | 30.0% | |
| TAATCCATTCTTTATCTTGC+TGG | - | chr7.4:9660285-9660304 | MS.gene22471:intron | 30.0% | |
| TAATTTATGTTGTTGAGGGT+TGG | - | chr7.4:9661022-9661041 | MS.gene22471:CDS | 30.0% | |
| TCAGATATTACCAAAATGGT+TGG | - | chr7.4:9661341-9661360 | MS.gene22471:CDS | 30.0% | |
| TCCTTCAGATATTACCAAAA+TGG | - | chr7.4:9661337-9661356 | MS.gene22471:CDS | 30.0% | |
| TGTTTATCAAATGCAACAAC+TGG | - | chr7.4:9660124-9660143 | MS.gene22471:CDS | 30.0% | |
| TTGGTAAAGGAGAAATGTAA+GGG | - | chr7.4:9661244-9661263 | MS.gene22471:CDS | 30.0% | |
| ! | ATGACCCTTTTGATAGAATT+TGG | - | chr7.4:9660367-9660386 | MS.gene22471:intron | 30.0% |
| ! | ATTTTATTCATGGATGCAGA+TGG | - | chr7.4:9661447-9661466 | MS.gene22471:intron | 30.0% |
| ! | TATTACCAAAATGGTTGGTT+TGG | - | chr7.4:9661346-9661365 | MS.gene22471:CDS | 30.0% |
| ! | TGACCCTTTTGATAGAATTT+GGG | - | chr7.4:9660368-9660387 | MS.gene22471:intron | 30.0% |
| !! | ACCATTTTGGTAATATCTGA+AGG | + | chr7.4:9661341-9661360 | None:intergenic | 30.0% |
| !! | ATTTTCAAGATGACTGTAAG+AGG | + | chr7.4:9661605-9661624 | None:intergenic | 30.0% |
| !! | GCAAGATAAAGAATGGATTA+AGG | + | chr7.4:9660285-9660304 | None:intergenic | 30.0% |
| !!! | ATTCTTTATCTTGCTGGTTT+TGG | - | chr7.4:9660291-9660310 | MS.gene22471:intron | 30.0% |
| AAATATCGCCTTTATGAACC+GGG | - | chr7.4:9660711-9660730 | MS.gene22471:intron | 35.0% | |
| AAGATGACTGTAAGAGGAAA+AGG | + | chr7.4:9661599-9661618 | None:intergenic | 35.0% | |
| AGAAACATAAGCCTCTTACA+AGG | + | chr7.4:9660329-9660348 | None:intergenic | 35.0% | |
| ATAGCAGGAAATCCACATAT+AGG | + | chr7.4:9661225-9661244 | None:intergenic | 35.0% | |
| ATATGTGGATTTCCTGCTAT+TGG | - | chr7.4:9661225-9661244 | MS.gene22471:CDS | 35.0% | |
| ATTCTATCAAAAGGGTCATC+AGG | + | chr7.4:9660366-9660385 | None:intergenic | 35.0% | |
| ATTTCTCCTTTACCAATAGC+AGG | + | chr7.4:9661240-9661259 | None:intergenic | 35.0% | |
| CAAACGAGTCTAGAAAATTC+AGG | - | chr7.4:9660622-9660641 | MS.gene22471:CDS | 35.0% | |
| CAAATGGATCTCTAACATAC+CGG | - | chr7.4:9660529-9660548 | MS.gene22471:intron | 35.0% | |
| CTTGAACTTCGACAATTCAA+TGG | - | chr7.4:9660166-9660185 | MS.gene22471:intron | 35.0% | |
| CTTGATGGAAATATGTTGAC+CGG | - | chr7.4:9661470-9661489 | MS.gene22471:intron | 35.0% | |
| GAAATATCGCCTTTATGAAC+CGG | - | chr7.4:9660710-9660729 | MS.gene22471:intron | 35.0% | |
| GACTCCCAAATTCTATCAAA+AGG | + | chr7.4:9660375-9660394 | None:intergenic | 35.0% | |
| GTTTGGTTGAACTGTAAGTT+TGG | - | chr7.4:9661363-9661382 | MS.gene22471:CDS | 35.0% | |
| TACAAAAGGTAGGGATAGAT+TGG | + | chr7.4:9660742-9660761 | None:intergenic | 35.0% | |
| TCAGATTAAGCTTCTCATTG+AGG | + | chr7.4:9660875-9660894 | None:intergenic | 35.0% | |
| ! | AAAGGAGAGTACAAAAGGTA+GGG | + | chr7.4:9660751-9660770 | None:intergenic | 35.0% |
| ! | ACAATAGCCTTGCTAATTTC+AGG | + | chr7.4:9660666-9660685 | None:intergenic | 35.0% |
| ! | CTAGATCTTGTTTGAAGCAT+TGG | - | chr7.4:9660992-9661011 | MS.gene22471:CDS | 35.0% |
| ! | CTGAATTTTCTAGACTCGTT+TGG | + | chr7.4:9660624-9660643 | None:intergenic | 35.0% |
| ! | TAAAGGAGAGTACAAAAGGT+AGG | + | chr7.4:9660752-9660771 | None:intergenic | 35.0% |
| ! | TCTAACATACCGGTTGAATT+TGG | - | chr7.4:9660539-9660558 | MS.gene22471:intron | 35.0% |
| ! | TTCAACCAAACCAACCATTT+TGG | + | chr7.4:9661354-9661373 | None:intergenic | 35.0% |
| ! | TTTGCAGTTGAAGCTATTTC+CGG | - | chr7.4:9661049-9661068 | MS.gene22471:CDS | 35.0% |
| !! | AATGGATTAAGGTACCTGAT+TGG | + | chr7.4:9660274-9660293 | None:intergenic | 35.0% |
| ACCCGGTAAAATCTGGTATT+GGG | + | chr7.4:9661496-9661515 | None:intergenic | 40.0% | |
| AGGGATAGATTGGTAAATCC+CGG | + | chr7.4:9660732-9660751 | None:intergenic | 40.0% | |
| CTCACTATTCTTCAGCAAAC+TGG | - | chr7.4:9661080-9661099 | MS.gene22471:CDS | 40.0% | |
| GAAACCCATCCAAATTCAAC+CGG | + | chr7.4:9660551-9660570 | None:intergenic | 40.0% | |
| GCTTATGTTTCTTCCGTTTC+AGG | - | chr7.4:9660337-9660356 | MS.gene22471:intron | 40.0% | |
| GGATTTCCTGCTATTGGTAA+AGG | - | chr7.4:9661231-9661250 | MS.gene22471:CDS | 40.0% | |
| GGGTGTCTTGGCAAATTTAA+AGG | + | chr7.4:9660769-9660788 | None:intergenic | 40.0% | |
| TATCCGGGAAAAACTTGACT+GGG | - | chr7.4:9661309-9661328 | MS.gene22471:CDS | 40.0% | |
| TATCTTGTTGATGTTGCTGC+TGG | - | chr7.4:9660417-9660436 | MS.gene22471:CDS | 40.0% | |
| TCAAGCTTGAATCGTGATAG+TGG | - | chr7.4:9661420-9661439 | MS.gene22471:intron | 40.0% | |
| TCATTGAGGAACTTACCATC+TGG | + | chr7.4:9660861-9660880 | None:intergenic | 40.0% | |
| TGGTAAATCCCGGTTCATAA+AGG | + | chr7.4:9660722-9660741 | None:intergenic | 40.0% | |
| TTATCCGGGAAAAACTTGAC+TGG | - | chr7.4:9661308-9661327 | MS.gene22471:CDS | 40.0% | |
| TTTACCTTAGTGTCTCTGCA+AGG | - | chr7.4:9660221-9660240 | MS.gene22471:intron | 40.0% | |
| ! | AAATTCAGGCTTTTGCTTCC+AGG | - | chr7.4:9660636-9660655 | MS.gene22471:CDS | 40.0% |
| ! | ACAGTTTTCTGCCTTGTAAG+AGG | - | chr7.4:9660315-9660334 | MS.gene22471:intron | 40.0% |
| ! | ACATACCGGTTGAATTTGGA+TGG | - | chr7.4:9660543-9660562 | MS.gene22471:intron | 40.0% |
| ! | ATTCCCAGTCAAGTTTTTCC+CGG | + | chr7.4:9661315-9661334 | None:intergenic | 40.0% |
| ! | CATACCGGTTGAATTTGGAT+GGG | - | chr7.4:9660544-9660563 | MS.gene22471:intron | 40.0% |
| ! | GTCTCTGCAAGGATCAATTT+TGG | - | chr7.4:9660232-9660251 | MS.gene22471:CDS | 40.0% |
| ! | TTGAATTTGGATGGGTTTCC+TGG | - | chr7.4:9660552-9660571 | MS.gene22471:intron | 40.0% |
| !! | AGAATAGTGAGAAAGCACTC+CGG | + | chr7.4:9661071-9661090 | None:intergenic | 40.0% |
| !! | AGATCCATTTGTACCGACTA+CGG | + | chr7.4:9660520-9660539 | None:intergenic | 40.0% |
| !! | TGCAAGGATCAATTTTGGTG+CGG | - | chr7.4:9660237-9660256 | MS.gene22471:CDS | 40.0% |
| AAAAACGACGGTTCACCAGA+TGG | - | chr7.4:9660843-9660862 | MS.gene22471:intron | 45.0% | |
| AAGACACCCGATTCATCCAA+GGG | - | chr7.4:9660780-9660799 | MS.gene22471:intron | 45.0% | |
| ATAACAAGCTGCCACCACAA+GGG | + | chr7.4:9661292-9661311 | None:intergenic | 45.0% | |
| ATCCATGTCTTCCTGTTCCA+TGG | - | chr7.4:9661119-9661138 | MS.gene22471:CDS | 45.0% | |
| ATCTCCATCGCATTTACGAG+AGG | + | chr7.4:9660807-9660826 | None:intergenic | 45.0% | |
| CACCCGGTAAAATCTGGTAT+TGG | + | chr7.4:9661497-9661516 | None:intergenic | 45.0% | |
| CTGCATGCGTAGAATGATGA+AGG | + | chr7.4:9661559-9661578 | None:intergenic | 45.0% | |
| GATCTTTAAGTCCATGCACC+CGG | + | chr7.4:9661513-9661532 | None:intergenic | 45.0% | |
| GGTCATCAGGATACCTGAAA+CGG | + | chr7.4:9660353-9660372 | None:intergenic | 45.0% | |
| TCAGCAAACTGGACACAAGA+AGG | - | chr7.4:9661091-9661110 | MS.gene22471:CDS | 45.0% | |
| TGATCCTTGCAGAGACACTA+AGG | + | chr7.4:9660228-9660247 | None:intergenic | 45.0% | |
| TTGTTACCTTGTGTCCCTTG+TGG | - | chr7.4:9661275-9661294 | MS.gene22471:CDS | 45.0% | |
| ! | GCCCAATACCAGATTTTACC+GGG | - | chr7.4:9661492-9661511 | MS.gene22471:CDS | 45.0% |
| ! | GGCCCAATACCAGATTTTAC+CGG | - | chr7.4:9661491-9661510 | MS.gene22471:CDS | 45.0% |
| ! | GGTAAAATCTGGTATTGGGC+CGG | + | chr7.4:9661492-9661511 | None:intergenic | 45.0% |
| ! | TAGCCTTGCTAATTTCAGGC+TGG | + | chr7.4:9660662-9660681 | None:intergenic | 45.0% |
| ACAGCCGTAGTCGGTACAAA+TGG | - | chr7.4:9660513-9660532 | MS.gene22471:intron | 50.0% | |
| ACAGTTCCCTCAAACTCGGA+AGG | + | chr7.4:9661666-9661685 | None:intergenic | 50.0% | |
| AGAGGTCCCTTGGATGAATC+GGG | + | chr7.4:9660789-9660808 | None:intergenic | 50.0% | |
| AGGCCAGCCTGAAATTAGCA+AGG | - | chr7.4:9660656-9660675 | MS.gene22471:CDS | 50.0% | |
| ATGGGTTTCCTGGCAATGCT+TGG | - | chr7.4:9660562-9660581 | MS.gene22471:intron | 50.0% | |
| CAAGACACCCGATTCATCCA+AGG | - | chr7.4:9660779-9660798 | MS.gene22471:intron | 50.0% | |
| CATGGATGCAGATGGCTTGA+TGG | - | chr7.4:9661455-9661474 | MS.gene22471:intron | 50.0% | |
| CTTGGATGAATCGGGTGTCT+TGG | + | chr7.4:9660781-9660800 | None:intergenic | 50.0% | |
| GACCATGGAACAGGAAGACA+TGG | + | chr7.4:9661124-9661143 | None:intergenic | 50.0% | |
| GAGAGGTCCCTTGGATGAAT+CGG | + | chr7.4:9660790-9660809 | None:intergenic | 50.0% | |
| GATAACAAGCTGCCACCACA+AGG | + | chr7.4:9661293-9661312 | None:intergenic | 50.0% | |
| GCAAACTGGACACAAGAAGG+AGG | - | chr7.4:9661094-9661113 | MS.gene22471:CDS | 50.0% | |
| GCTGTCTGCATCACTTTCAC+TGG | + | chr7.4:9660498-9660517 | None:intergenic | 50.0% | |
| GTCTGCATCACTTTCACTGG+TGG | + | chr7.4:9660495-9660514 | None:intergenic | 50.0% | |
| GTCTTCCTGTTCCATGGTCA+TGG | - | chr7.4:9661125-9661144 | MS.gene22471:CDS | 50.0% | |
| GTTGTGGATCTGAGCTACAG+CGG | + | chr7.4:9661153-9661172 | None:intergenic | 50.0% | |
| TCAGTTCAACGGTGTGCTAC+CGG | - | chr7.4:9661627-9661646 | MS.gene22471:CDS | 50.0% | |
| TCCATGCACCCGGTAAAATC+TGG | + | chr7.4:9661503-9661522 | None:intergenic | 50.0% | |
| TGGGTTTCCTGGCAATGCTT+GGG | - | chr7.4:9660563-9660582 | MS.gene22471:intron | 50.0% | |
| TTACCTTGTGTCCCTTGTGG+TGG | - | chr7.4:9661278-9661297 | MS.gene22471:CDS | 50.0% | |
| ! | ACCAGATTTTACCGGGTGCA+TGG | - | chr7.4:9661499-9661518 | MS.gene22471:CDS | 50.0% |
| ! | TTGCTAATTTCAGGCTGGCC+TGG | + | chr7.4:9660657-9660676 | None:intergenic | 50.0% |
| !! | TGTGGTGGCAGCTTGTTATC+CGG | - | chr7.4:9661293-9661312 | MS.gene22471:CDS | 50.0% |
| ACTCGGAAGGTTCGCCAAAG+AGG | + | chr7.4:9661653-9661672 | None:intergenic | 55.0% | |
| CGCATTTACGAGAGGTCCCT+TGG | + | chr7.4:9660799-9660818 | None:intergenic | 55.0% | |
| CGGAGACTGATGCTCCAATC+AGG | - | chr7.4:9660257-9660276 | MS.gene22471:CDS | 55.0% | |
| CGGATCCATGACCATGGAAC+AGG | + | chr7.4:9661133-9661152 | None:intergenic | 55.0% | |
| CTACAGCGGATCCATGACCA+TGG | + | chr7.4:9661139-9661158 | None:intergenic | 55.0% | |
| GGCGAACCTTCCGAGTTTGA+GGG | - | chr7.4:9661657-9661676 | MS.gene22471:CDS | 55.0% | |
| GGGACCTCTCGTAAATGCGA+TGG | - | chr7.4:9660800-9660819 | MS.gene22471:intron | 55.0% | |
| GTGATGCAGACAGCCGTAGT+CGG | - | chr7.4:9660504-9660523 | MS.gene22471:intron | 55.0% | |
| TGGCGAACCTTCCGAGTTTG+AGG | - | chr7.4:9661656-9661675 | MS.gene22471:CDS | 55.0% | |
| !! | GTGGTGGCAGCTTGTTATCC+GGG | - | chr7.4:9661294-9661313 | MS.gene22471:CDS | 55.0% |
| CTGCCACCACAAGGGACACA+AGG | + | chr7.4:9661284-9661303 | None:intergenic | 60.0% | |
| GGAAGGTTCGCCAAAGAGGC+CGG | + | chr7.4:9661649-9661668 | None:intergenic | 60.0% | |
| ! | GTGACTGCCCAAGCATTGCC+AGG | + | chr7.4:9660573-9660592 | None:intergenic | 60.0% |
| CGGTGTGCTACCGGCCTCTT+TGG | - | chr7.4:9661636-9661655 | MS.gene22471:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 9660079 | 9661687 | 9660079 | ID=MS.gene22471 |
| chr7.4 | mRNA | 9660079 | 9661687 | 9660079 | ID=MS.gene22471.t1;Parent=MS.gene22471 |
| chr7.4 | exon | 9661488 | 9661687 | 9661488 | ID=MS.gene22471.t1.exon1;Parent=MS.gene22471.t1 |
| chr7.4 | CDS | 9661488 | 9661687 | 9661488 | ID=cds.MS.gene22471.t1;Parent=MS.gene22471.t1 |
| chr7.4 | exon | 9660902 | 9661407 | 9660902 | ID=MS.gene22471.t1.exon2;Parent=MS.gene22471.t1 |
| chr7.4 | CDS | 9660902 | 9661407 | 9660902 | ID=cds.MS.gene22471.t1;Parent=MS.gene22471.t1 |
| chr7.4 | exon | 9660578 | 9660710 | 9660578 | ID=MS.gene22471.t1.exon3;Parent=MS.gene22471.t1 |
| chr7.4 | CDS | 9660578 | 9660710 | 9660578 | ID=cds.MS.gene22471.t1;Parent=MS.gene22471.t1 |
| chr7.4 | exon | 9660391 | 9660462 | 9660391 | ID=MS.gene22471.t1.exon4;Parent=MS.gene22471.t1 |
| chr7.4 | CDS | 9660391 | 9660462 | 9660391 | ID=cds.MS.gene22471.t1;Parent=MS.gene22471.t1 |
| chr7.4 | exon | 9660232 | 9660300 | 9660232 | ID=MS.gene22471.t1.exon5;Parent=MS.gene22471.t1 |
| chr7.4 | CDS | 9660232 | 9660300 | 9660232 | ID=cds.MS.gene22471.t1;Parent=MS.gene22471.t1 |
| chr7.4 | exon | 9660079 | 9660154 | 9660079 | ID=MS.gene22471.t1.exon6;Parent=MS.gene22471.t1 |
| chr7.4 | CDS | 9660079 | 9660154 | 9660079 | ID=cds.MS.gene22471.t1;Parent=MS.gene22471.t1 |
| Gene Sequence |
| Protein sequence |
