Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058823.t1 | XP_003629868.1 | 86.5 | 679 | 86 | 3 | 1 | 678 | 1 | 674 | 0.00E+00 | 1111.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058823.t1 | Q9ZP55 | 57.0 | 672 | 280 | 5 | 3 | 671 | 2 | 667 | 1.8e-207 | 723.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058823.t1 | G7L7C1 | 86.5 | 679 | 86 | 3 | 1 | 678 | 1 | 674 | 0.0e+00 | 1111.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene058823 | 0.846005 | 2.85E-59 | -1.69E-46 |
| MS.gene058823 | MS.gene058909 | 0.816333 | 5.84E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene058912 | 0.816605 | 5.07E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene05894 | 0.81085 | 9.39E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene061790 | 0.842886 | 1.97E-58 | -1.69E-46 |
| MS.gene058823 | MS.gene065643 | 0.81654 | 5.25E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene065674 | 0.807033 | 6.16E-50 | -1.69E-46 |
| MS.gene058823 | MS.gene065981 | 0.931423 | 3.86E-94 | -1.69E-46 |
| MS.gene058823 | MS.gene06793 | 0.838169 | 3.37E-57 | -1.69E-46 |
| MS.gene058823 | MS.gene069539 | 0.803332 | 3.67E-49 | -1.69E-46 |
| MS.gene058823 | MS.gene071428 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene058823 | MS.gene072046 | 0.807317 | 5.36E-50 | -1.69E-46 |
| MS.gene058823 | MS.gene072080 | 0.859402 | 4.24E-63 | -1.69E-46 |
| MS.gene058823 | MS.gene07246 | 0.815855 | 7.46E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene08366 | 0.826311 | 2.91E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene09250 | 0.81162 | 6.39E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene09801 | 0.84742 | 1.17E-59 | -1.69E-46 |
| MS.gene058823 | MS.gene20032 | 0.847355 | 1.22E-59 | -1.69E-46 |
| MS.gene058823 | MS.gene20768 | 0.803989 | 2.68E-49 | -1.69E-46 |
| MS.gene058823 | MS.gene22148 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene058823 | MS.gene22470 | 0.842071 | 3.23E-58 | -1.69E-46 |
| MS.gene058823 | MS.gene22471 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene25966 | 0.800487 | 1.41E-48 | -1.69E-46 |
| MS.gene058823 | MS.gene26381 | 0.824146 | 9.45E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene27274 | 0.814789 | 1.29E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene27860 | 0.826823 | 2.20E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene27862 | 0.998069 | 2.03E-255 | -1.69E-46 |
| MS.gene058823 | MS.gene29731 | 0.813416 | 2.59E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene29884 | 0.851536 | 8.33E-61 | -1.69E-46 |
| MS.gene058823 | MS.gene32024 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene058823 | MS.gene32854 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene058823 | MS.gene39297 | 0.838814 | 2.30E-57 | -1.69E-46 |
| MS.gene058823 | MS.gene39530 | 0.818608 | 1.79E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene42296 | 0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene058823 | MS.gene43516 | 0.824727 | 6.90E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene45937 | 0.818017 | 2.44E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene47958 | 0.81368 | 2.26E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene47960 | 0.813258 | 2.80E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene47963 | 0.8128 | 3.53E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene53003 | 0.811416 | 7.08E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene53004 | 0.80164 | 8.18E-49 | -1.69E-46 |
| MS.gene058823 | MS.gene53376 | 0.827983 | 1.16E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene56800 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene058823 | MS.gene57303 | 0.844056 | 9.58E-59 | -1.69E-46 |
| MS.gene058823 | MS.gene57652 | 0.803412 | 3.53E-49 | -1.69E-46 |
| MS.gene058823 | MS.gene57665 | 0.826508 | 2.61E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene57666 | 0.814266 | 1.68E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene62603 | 0.849033 | 4.19E-60 | -1.69E-46 |
| MS.gene058823 | MS.gene65139 | 0.813948 | 1.98E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene69443 | 0.817223 | 3.69E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene71459 | 0.817739 | 2.82E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene71460 | 0.816878 | 4.41E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene71461 | 0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene058823 | MS.gene71698 | 0.827244 | 1.74E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene72543 | 0.838156 | 3.40E-57 | -1.69E-46 |
| MS.gene058823 | MS.gene75220 | 0.823601 | 1.27E-53 | -1.69E-46 |
| MS.gene058823 | MS.gene75849 | 0.85409 | 1.55E-61 | -1.69E-46 |
| MS.gene058823 | MS.gene76991 | 0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene058823 | MS.gene77669 | 0.840616 | 7.81E-58 | -1.69E-46 |
| MS.gene058823 | MS.gene79784 | 0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene058823 | MS.gene79951 | 0.831705 | 1.43E-55 | -1.69E-46 |
| MS.gene058823 | MS.gene80322 | 0.838844 | 2.26E-57 | -1.69E-46 |
| MS.gene058823 | MS.gene84497 | 0.823268 | 1.52E-53 | -1.69E-46 |
| MS.gene058823 | MS.gene92988 | 0.830215 | 3.33E-55 | -1.69E-46 |
| MS.gene058823 | MS.gene94168 | 0.813409 | 2.60E-51 | -1.69E-46 |
| MS.gene058823 | MS.gene95437 | 0.82622 | 3.06E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene99526 | 0.811965 | 5.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene058823 | MS.gene32695 | PPI |
| MS.gene058823 | MS.gene014901 | PPI |
| MS.gene058823 | MS.gene80193 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058823.t1 | MTR_8g087770 | 86.451 | 679 | 86 | 3 | 1 | 678 | 1 | 674 | 0.0 | 1195 |
| MS.gene058823.t1 | MTR_8g087750 | 82.712 | 671 | 111 | 3 | 6 | 675 | 11 | 677 | 0.0 | 1131 |
| MS.gene058823.t1 | MTR_8g087763 | 88.889 | 225 | 25 | 0 | 374 | 598 | 4 | 228 | 1.21e-144 | 425 |
| MS.gene058823.t1 | MTR_4g093750 | 34.491 | 403 | 235 | 14 | 67 | 452 | 35 | 425 | 2.83e-42 | 164 |
| MS.gene058823.t1 | MTR_4g093750 | 40.210 | 286 | 149 | 9 | 67 | 337 | 35 | 313 | 2.20e-41 | 161 |
| MS.gene058823.t1 | MTR_2g009690 | 37.261 | 314 | 185 | 6 | 63 | 366 | 40 | 351 | 5.56e-41 | 160 |
| MS.gene058823.t1 | MTR_5g009150 | 30.128 | 468 | 291 | 15 | 69 | 518 | 35 | 484 | 2.06e-34 | 139 |
| MS.gene058823.t1 | MTR_1g032550 | 35.336 | 283 | 163 | 7 | 69 | 337 | 35 | 311 | 2.34e-33 | 136 |
| MS.gene058823.t1 | MTR_8g105580 | 35.461 | 282 | 163 | 6 | 69 | 337 | 35 | 310 | 7.45e-33 | 134 |
| MS.gene058823.t1 | MTR_8g105580 | 35.461 | 282 | 163 | 6 | 69 | 337 | 35 | 310 | 7.97e-33 | 134 |
| MS.gene058823.t1 | MTR_7g451010 | 34.700 | 317 | 181 | 9 | 69 | 369 | 40 | 346 | 6.45e-32 | 132 |
| MS.gene058823.t1 | MTR_8g099550 | 33.956 | 321 | 178 | 10 | 69 | 369 | 34 | 340 | 6.80e-32 | 131 |
| MS.gene058823.t1 | MTR_8g009510 | 35.220 | 318 | 178 | 10 | 69 | 369 | 40 | 346 | 1.05e-31 | 131 |
| MS.gene058823.t1 | MTR_4g098920 | 34.375 | 320 | 178 | 11 | 69 | 369 | 34 | 340 | 3.69e-31 | 129 |
| MS.gene058823.t1 | MTR_8g027675 | 41.709 | 199 | 105 | 5 | 69 | 264 | 34 | 224 | 6.03e-31 | 129 |
| MS.gene058823.t1 | MTR_4g085860 | 75.000 | 76 | 18 | 1 | 206 | 280 | 2 | 77 | 2.37e-30 | 114 |
| MS.gene058823.t1 | MTR_6g045107 | 73.684 | 76 | 19 | 1 | 206 | 280 | 2 | 77 | 2.07e-28 | 108 |
| MS.gene058823.t1 | MTR_8g009510 | 31.452 | 248 | 146 | 7 | 136 | 369 | 2 | 239 | 3.36e-17 | 85.9 |
| MS.gene058823.t1 | MTR_8g463270 | 30.131 | 229 | 145 | 6 | 54 | 269 | 27 | 253 | 4.04e-16 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058823.t1 | AT1G60500 | 56.994 | 672 | 280 | 5 | 3 | 671 | 2 | 667 | 0.0 | 774 |
| MS.gene058823.t1 | AT1G60530 | 71.379 | 290 | 75 | 1 | 18 | 307 | 19 | 300 | 7.04e-143 | 419 |
| MS.gene058823.t1 | AT2G14120 | 29.955 | 444 | 288 | 10 | 25 | 452 | 1 | 437 | 2.07e-39 | 155 |
| MS.gene058823.t1 | AT2G14120 | 29.955 | 444 | 288 | 10 | 25 | 452 | 1 | 437 | 2.45e-39 | 155 |
| MS.gene058823.t1 | AT2G14120 | 29.955 | 444 | 288 | 10 | 25 | 452 | 1 | 437 | 2.81e-39 | 155 |
| MS.gene058823.t1 | AT2G14120 | 33.828 | 337 | 205 | 6 | 25 | 346 | 1 | 334 | 3.40e-39 | 155 |
| MS.gene058823.t1 | AT4G33650 | 29.571 | 443 | 268 | 11 | 35 | 452 | 29 | 452 | 5.03e-39 | 154 |
| MS.gene058823.t1 | AT4G33650 | 29.571 | 443 | 268 | 11 | 35 | 452 | 29 | 452 | 6.12e-39 | 154 |
| MS.gene058823.t1 | AT1G14830 | 32.903 | 310 | 196 | 6 | 69 | 369 | 35 | 341 | 5.06e-34 | 138 |
| MS.gene058823.t1 | AT5G42080 | 30.258 | 466 | 293 | 13 | 69 | 518 | 34 | 483 | 5.05e-33 | 135 |
| MS.gene058823.t1 | AT5G42080 | 30.258 | 466 | 293 | 13 | 69 | 518 | 34 | 483 | 5.05e-33 | 135 |
| MS.gene058823.t1 | AT2G44590 | 24.307 | 613 | 406 | 19 | 69 | 665 | 35 | 605 | 6.09e-33 | 135 |
| MS.gene058823.t1 | AT3G60190 | 33.232 | 328 | 199 | 9 | 69 | 386 | 40 | 357 | 9.20e-33 | 134 |
| MS.gene058823.t1 | AT5G42080 | 34.505 | 313 | 187 | 8 | 69 | 369 | 34 | 340 | 3.67e-32 | 130 |
| MS.gene058823.t1 | AT5G42080 | 34.505 | 313 | 187 | 8 | 69 | 369 | 34 | 340 | 8.36e-32 | 131 |
| MS.gene058823.t1 | AT3G61760 | 34.472 | 322 | 175 | 12 | 69 | 369 | 34 | 340 | 3.20e-30 | 125 |
| MS.gene058823.t1 | AT3G61760 | 34.472 | 322 | 175 | 12 | 69 | 369 | 34 | 340 | 3.31e-30 | 126 |
| MS.gene058823.t1 | AT3G61760 | 34.472 | 322 | 175 | 12 | 69 | 369 | 34 | 340 | 4.29e-30 | 125 |
| MS.gene058823.t1 | AT2G44590 | 22.838 | 613 | 398 | 20 | 69 | 665 | 35 | 588 | 3.43e-23 | 104 |
| MS.gene058823.t1 | AT2G44590 | 28.875 | 329 | 195 | 10 | 69 | 386 | 35 | 335 | 2.46e-22 | 102 |
| MS.gene058823.t1 | AT1G53140 | 27.542 | 236 | 159 | 5 | 44 | 269 | 36 | 269 | 5.03e-15 | 79.3 |
Find 126 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTTTCAACAAAATTAAT+TGG | 0.173861 | 4.1:-12941817 | None:intergenic |
| CTTGAGGAAGCCAAATTTAT+TGG | 0.191059 | 4.1:+12941721 | MS.gene058823:CDS |
| ATTCGGAAGACCAATAAATT+TGG | 0.194065 | 4.1:-12941731 | None:intergenic |
| ATGGACAGGATTGGAAATTA+TGG | 0.215755 | 4.1:+12942447 | MS.gene058823:CDS |
| ATCAAGTTTGTTTGCCTTTG+TGG | 0.244719 | 4.1:-12940465 | None:intergenic |
| TATTGTTGGAATTCCTGTTT+TGG | 0.276334 | 4.1:+12941351 | MS.gene058823:CDS |
| GAGGAGTCTCCTTCAATATC+AGG | 0.303692 | 4.1:+12942357 | MS.gene058823:CDS |
| ATCTGATCATAAATGTTATC+AGG | 0.304162 | 4.1:-12941004 | None:intergenic |
| AGGCCAGATTGACAGCTTAT+TGG | 0.313028 | 4.1:+12942193 | MS.gene058823:CDS |
| TTCTAACTATTATCAGCTTC+AGG | 0.313313 | 4.1:+12941888 | MS.gene058823:CDS |
| GAACTTTGATTTCCTCCATT+AGG | 0.316135 | 4.1:-12941699 | None:intergenic |
| TAACATTTATGATCAGATTA+AGG | 0.317964 | 4.1:+12941009 | MS.gene058823:CDS |
| CTTCCAACCATTGTTGTTGT+TGG | 0.322456 | 4.1:+12940647 | MS.gene058823:CDS |
| AGAGACCGTGGCCAACATTA+TGG | 0.325375 | 4.1:+12942428 | MS.gene058823:CDS |
| TCACAAACTGTTGATAAAAC+TGG | 0.334047 | 4.1:+12941127 | MS.gene058823:CDS |
| TCCACAGCCAGAGCTTGTTT+TGG | 0.338480 | 4.1:+12940787 | MS.gene058823:CDS |
| AATTCAGCATATCTACTAAT+CGG | 0.340774 | 4.1:-12941624 | None:intergenic |
| CCTTACTTCAGAGAAAAGTT+AGG | 0.351453 | 4.1:+12941779 | MS.gene058823:CDS |
| TGAAAGTGTATGGAATTATC+TGG | 0.352378 | 4.1:+12941831 | MS.gene058823:CDS |
| CTTACTATGGTTGATCTTCC+AGG | 0.352429 | 4.1:+12940953 | MS.gene058823:CDS |
| TAAGAAGATTAATGAGAAAC+TGG | 0.360082 | 4.1:+12941432 | MS.gene058823:CDS |
| CAAGGGTACCTTTGGTTATG+AGG | 0.366182 | 4.1:+12940747 | MS.gene058823:CDS |
| TGGACAGGATTGGAAATTAT+GGG | 0.366857 | 4.1:+12942448 | MS.gene058823:CDS |
| CACATGTAACCCTGAGTACT+TGG | 0.369075 | 4.1:+12942011 | MS.gene058823:CDS |
| GCAGTTCTTGGCATGAAATT+CGG | 0.376721 | 4.1:-12941748 | None:intergenic |
| GCCTGCTAATTTATCCTCAC+TGG | 0.379029 | 4.1:+12941483 | MS.gene058823:CDS |
| TGGAGTTCCTGATCTTACTA+TGG | 0.379945 | 4.1:+12940940 | MS.gene058823:CDS |
| CTCCATTAGGAAATCCTTAG+TGG | 0.385218 | 4.1:-12941686 | None:intergenic |
| TAAATCTCCTGAAGGTTTGC+TGG | 0.387244 | 4.1:+12941183 | MS.gene058823:CDS |
| TTCAAAATAATACTCTCTTC+AGG | 0.392099 | 4.1:-12941055 | None:intergenic |
| GCTCTGGCTGTGGAAGTAAA+TGG | 0.394731 | 4.1:-12940778 | None:intergenic |
| AACAATAGATTTGTCTATCC+TGG | 0.395168 | 4.1:-12941335 | None:intergenic |
| ATAACTCGTGTTCCTGTTCA+TGG | 0.396246 | 4.1:+12940977 | MS.gene058823:CDS |
| ACCTTCTCCAGCAAACCTTC+AGG | 0.399453 | 4.1:-12941190 | None:intergenic |
| TTTCCAATAAGCTGTCAATC+TGG | 0.399717 | 4.1:-12942196 | None:intergenic |
| TTACTACTTGTGAGTCGATA+AGG | 0.405010 | 4.1:+12941101 | MS.gene058823:CDS |
| TGTCTCTTCCCTGATATTGA+AGG | 0.410432 | 4.1:-12942366 | None:intergenic |
| TTAATCTTCTTAATGATCTC+TGG | 0.413053 | 4.1:-12941421 | None:intergenic |
| GACGATGTTAACATTGGTCT+TGG | 0.414913 | 4.1:+12941220 | MS.gene058823:CDS |
| TTGATGCTCTTGAAAATCTA+AGG | 0.416842 | 4.1:+12940594 | MS.gene058823:CDS |
| AATTTGTACAAGGGTACCTT+TGG | 0.424069 | 4.1:+12940739 | MS.gene058823:CDS |
| AAGGTCAGAAAAGCAGTTCT+TGG | 0.424321 | 4.1:-12941760 | None:intergenic |
| GTCTTGGTTATGTTTGTGTA+AGG | 0.435750 | 4.1:+12941236 | MS.gene058823:CDS |
| ATATCCACACATGTTGAATC+AGG | 0.440980 | 4.1:+12942158 | MS.gene058823:CDS |
| ACAGCCACTGAGGAGCTTGC+TGG | 0.443000 | 4.1:+12940866 | MS.gene058823:CDS |
| TGGGGTGTTGGAAATCCCTT+TGG | 0.443439 | 4.1:-12940894 | None:intergenic |
| CTTACTTCAGAGAAAAGTTA+GGG | 0.447328 | 4.1:+12941780 | MS.gene058823:CDS |
| GGCTACTAGTTTGCATGAGC+TGG | 0.448592 | 4.1:+12941453 | MS.gene058823:CDS |
| AGGATAGACAAATCTATTGT+TGG | 0.453655 | 4.1:+12941337 | MS.gene058823:CDS |
| TCATTATAAGAAGATACAAT+TGG | 0.458646 | 4.1:-12940554 | None:intergenic |
| GGAAGAGACAGAAGTTGAGC+AGG | 0.460748 | 4.1:+12942379 | MS.gene058823:CDS |
| GAATCAGGCTTATGATTTGA+AGG | 0.463037 | 4.1:+12942173 | MS.gene058823:CDS |
| ACAATTGGTGCAACAGATAG+AGG | 0.467988 | 4.1:-12940539 | None:intergenic |
| TCTTTACTATCAAAGTCAGT+GGG | 0.470875 | 4.1:-12940913 | None:intergenic |
| TTATACTCCTCCAAGTACTC+AGG | 0.473801 | 4.1:-12942021 | None:intergenic |
| TGATACCAGCTAATGATTCA+AGG | 0.474056 | 4.1:-12940697 | None:intergenic |
| GAGCTTGCTGGCACTGCCAA+AGG | 0.478600 | 4.1:+12940878 | MS.gene058823:CDS |
| TCCTGAAGGTTTGCTGGAGA+AGG | 0.484851 | 4.1:+12941189 | MS.gene058823:CDS |
| GTTGTTGGAGATCAATCATC+TGG | 0.485196 | 4.1:+12940662 | MS.gene058823:CDS |
| AGCTTGAAGCACATGCTGAA+TGG | 0.486139 | 4.1:-12941962 | None:intergenic |
| TTATACTCCAAAACAAGCTC+TGG | 0.492061 | 4.1:-12940794 | None:intergenic |
| TATCAAAGTCAGTGGGGTGT+TGG | 0.492352 | 4.1:-12940906 | None:intergenic |
| TCCAATCCTGTCCATAATGT+TGG | 0.494024 | 4.1:-12942439 | None:intergenic |
| TTATCAGGTTGACCATGAAC+AGG | 0.495576 | 4.1:-12940989 | None:intergenic |
| GCGTCTCAACATTGCTAAAG+AGG | 0.501157 | 4.1:+12940616 | MS.gene058823:CDS |
| TGCCACTAAGGATTTCCTAA+TGG | 0.506730 | 4.1:+12941684 | MS.gene058823:CDS |
| TGTGTGGATATTTCATAAGC+TGG | 0.507052 | 4.1:-12942146 | None:intergenic |
| GTTTGTGTAAGGAATCGAAT+TGG | 0.512590 | 4.1:+12941247 | MS.gene058823:CDS |
| CTTATTGGAAAATTGTGCTC+CGG | 0.520290 | 4.1:+12942208 | MS.gene058823:CDS |
| GCCAGTGAGGATAAATTAGC+AGG | 0.522213 | 4.1:-12941484 | None:intergenic |
| AGATCAACCATAGTAAGATC+AGG | 0.522883 | 4.1:-12940947 | None:intergenic |
| AGTGTCCTTGAATCATTAGC+TGG | 0.523168 | 4.1:+12940692 | MS.gene058823:CDS |
| TCCAAAACAAGCTCTGGCTG+TGG | 0.524796 | 4.1:-12940788 | None:intergenic |
| GGTGCAACAGATAGAGGTTG+AGG | 0.525331 | 4.1:-12940533 | None:intergenic |
| TGTTGAAAGTAATGCCACTA+AGG | 0.528407 | 4.1:+12941672 | MS.gene058823:CDS |
| GCCAACATTATGGACAGGAT+TGG | 0.530993 | 4.1:+12942438 | MS.gene058823:CDS |
| AATGAACTGTTATCAGCAAA+TGG | 0.537861 | 4.1:+12942312 | MS.gene058823:CDS |
| ATTCAGCATATCTACTAATC+GGG | 0.539015 | 4.1:-12941623 | None:intergenic |
| ATCAGCTTGCCACGTGGACA+AGG | 0.540401 | 4.1:+12940716 | MS.gene058823:CDS |
| TCAGATTAAGGATATTATCA+TGG | 0.543580 | 4.1:+12941021 | MS.gene058823:CDS |
| GGAGGAAATCAAAGTTCTTG+AGG | 0.547046 | 4.1:+12941705 | MS.gene058823:CDS |
| AGCTTGCTGGCACTGCCAAA+GGG | 0.547647 | 4.1:+12940879 | MS.gene058823:CDS |
| TCTCCAACAACAACAATGGT+TGG | 0.551269 | 4.1:-12940650 | None:intergenic |
| TGTGAATGTTGATCTGCAAA+AGG | 0.555960 | 4.1:+12942281 | MS.gene058823:CDS |
| AGTGTCACACACTTCTGTCC+AGG | 0.565122 | 4.1:+12941317 | MS.gene058823:CDS |
| ACTTTGATAGTAAAGAAGAA+TGG | 0.569006 | 4.1:+12940920 | MS.gene058823:CDS |
| TCAAGTACTGTGAAGCTGAA+AGG | 0.569995 | 4.1:+12942102 | MS.gene058823:CDS |
| CACTAAGGATTTCCTAATGG+AGG | 0.576778 | 4.1:+12941687 | MS.gene058823:CDS |
| AGTGCCAGCAAGCTCCTCAG+TGG | 0.578957 | 4.1:-12940870 | None:intergenic |
| TTCTTTACTATCAAAGTCAG+TGG | 0.579933 | 4.1:-12940914 | None:intergenic |
| TATACTCCTCCAAGTACTCA+GGG | 0.581284 | 4.1:-12942020 | None:intergenic |
| CCGTGGCCAACATTATGGAC+AGG | 0.581354 | 4.1:+12942433 | MS.gene058823:CDS |
| CAATCACATCAATTAACCTC+CGG | 0.585742 | 4.1:-12942227 | None:intergenic |
| CGTCTCAACATTGCTAAAGA+GGG | 0.585949 | 4.1:+12940617 | MS.gene058823:CDS |
| AGGAGTCTCCTTCAATATCA+GGG | 0.586223 | 4.1:+12942358 | MS.gene058823:CDS |
| ATGTAACCCTGAGTACTTGG+AGG | 0.589927 | 4.1:+12942014 | MS.gene058823:CDS |
| CCTGTCCATAATGTTGGCCA+CGG | 0.590976 | 4.1:-12942433 | None:intergenic |
| GTGGACAAGGAATTTGTACA+AGG | 0.592993 | 4.1:+12940729 | MS.gene058823:CDS |
| GGACAGGATTGGAAATTATG+GGG | 0.597404 | 4.1:+12942449 | MS.gene058823:CDS |
| AAGGCTGATAAATCTCCTGA+AGG | 0.599516 | 4.1:+12941175 | MS.gene058823:CDS |
| CAAACAACTTTCAACTGATG+AGG | 0.601066 | 4.1:+12940820 | MS.gene058823:CDS |
| AACGCTTGCTGTCGTGACAA+AGG | 0.611997 | 4.1:+12941156 | MS.gene058823:CDS |
| ACAGGAACACGAGTTATACC+TGG | 0.615115 | 4.1:-12940971 | None:intergenic |
| TGGTGTTGAGAGGCTGCTTG+AGG | 0.618613 | 4.1:+12942338 | MS.gene058823:CDS |
| TGTGCTTCAAGCTGTTGAGA+TGG | 0.619725 | 4.1:+12941972 | MS.gene058823:CDS |
| TAAGCCTGATTCAACATGTG+TGG | 0.620737 | 4.1:-12942162 | None:intergenic |
| ATTGGAAAATTGTGCTCCGG+AGG | 0.621567 | 4.1:+12942211 | MS.gene058823:CDS |
| GGAGGAGTATAACAAGCTGA+TGG | 0.621625 | 4.1:+12942032 | MS.gene058823:CDS |
| ACAGCTGACGATGTTAACAT+TGG | 0.623909 | 4.1:+12941214 | MS.gene058823:CDS |
| AAGAGTCTTACGAAGATGCA+AGG | 0.624326 | 4.1:+12941272 | MS.gene058823:CDS |
| GATTTGCAGAAAAGCTGACA+TGG | 0.626155 | 4.1:-12941512 | None:intergenic |
| CTGTTATCAGCAAATGGTGG+TGG | 0.626367 | 4.1:+12942318 | MS.gene058823:CDS |
| CAAATGGTGGTGGTGTTGAG+AGG | 0.637671 | 4.1:+12942328 | MS.gene058823:CDS |
| ACTGTGAAGCTGAAAGGTGT+TGG | 0.640769 | 4.1:+12942108 | MS.gene058823:CDS |
| GAAAGAAAGCAAAGAGACCG+TGG | 0.645229 | 4.1:+12942416 | MS.gene058823:CDS |
| TTGATCTCCAACAACAACAA+TGG | 0.648908 | 4.1:-12940654 | None:intergenic |
| GTACAAATTCCTTGTCCACG+TGG | 0.660130 | 4.1:-12940725 | None:intergenic |
| TGACATGGCATCAGCCAGTG+AGG | 0.671512 | 4.1:-12941497 | None:intergenic |
| TGCTATAAATACAGCCACTG+AGG | 0.694192 | 4.1:+12940856 | MS.gene058823:CDS |
| CTTTACTATCAAAGTCAGTG+GGG | 0.697240 | 4.1:-12940912 | None:intergenic |
| GCTGGTATCAGCTTGCCACG+TGG | 0.699523 | 4.1:+12940710 | MS.gene058823:CDS |
| GTTGATCATCAACATCAACA+TGG | 0.706155 | 4.1:-12940511 | None:intergenic |
| TGGAAACAAGAGTTCCACAA+AGG | 0.707464 | 4.1:+12940451 | MS.gene058823:CDS |
| TTACTTCAGAGAAAAGTTAG+GGG | 0.725881 | 4.1:+12941781 | MS.gene058823:CDS |
| TGGACAAGGAATTTGTACAA+GGG | 0.728664 | 4.1:+12940730 | MS.gene058823:CDS |
| GAACTGTTATCAGCAAATGG+TGG | 0.747464 | 4.1:+12942315 | MS.gene058823:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACTTTCAACAAAATTAAT+TGG | - | chr4.1:12941820-12941839 | None:intergenic | 20.0% |
| !! | CTGAAAAAAATTCTTCTTAT+AGG | + | chr4.1:12941556-12941575 | MS.gene058823:CDS | 20.0% |
| !! | TAACATTTATGATCAGATTA+AGG | + | chr4.1:12941009-12941028 | MS.gene058823:CDS | 20.0% |
| !! | TCATTATAAGAAGATACAAT+TGG | - | chr4.1:12940557-12940576 | None:intergenic | 20.0% |
| !!! | TTAATTTTGTTGAAAGTGTA+TGG | + | chr4.1:12941821-12941840 | MS.gene058823:CDS | 20.0% |
| ! | AATTCAGCATATCTACTAAT+CGG | - | chr4.1:12941627-12941646 | None:intergenic | 25.0% |
| ! | ATCTGATCATAAATGTTATC+AGG | - | chr4.1:12941007-12941026 | None:intergenic | 25.0% |
| ! | TAAGAAGATTAATGAGAAAC+TGG | + | chr4.1:12941432-12941451 | MS.gene058823:CDS | 25.0% |
| ! | TCAGATTAAGGATATTATCA+TGG | + | chr4.1:12941021-12941040 | MS.gene058823:CDS | 25.0% |
| ! | TTAATCTTCTTAATGATCTC+TGG | - | chr4.1:12941424-12941443 | None:intergenic | 25.0% |
| ! | TTCAAAATAATACTCTCTTC+AGG | - | chr4.1:12941058-12941077 | None:intergenic | 25.0% |
| !! | ACTTTGATAGTAAAGAAGAA+TGG | + | chr4.1:12940920-12940939 | MS.gene058823:CDS | 25.0% |
| !! | TCTTTTTCTTCTTAGCAATA+AGG | - | chr4.1:12941939-12941958 | None:intergenic | 25.0% |
| AACAATAGATTTGTCTATCC+TGG | - | chr4.1:12941338-12941357 | None:intergenic | 30.0% | |
| AATGAACTGTTATCAGCAAA+TGG | + | chr4.1:12942312-12942331 | MS.gene058823:CDS | 30.0% | |
| AGGATAGACAAATCTATTGT+TGG | + | chr4.1:12941337-12941356 | MS.gene058823:CDS | 30.0% | |
| ATTCAGCATATCTACTAATC+GGG | - | chr4.1:12941626-12941645 | None:intergenic | 30.0% | |
| ATTCGGAAGACCAATAAATT+TGG | - | chr4.1:12941734-12941753 | None:intergenic | 30.0% | |
| CTTACTTCAGAGAAAAGTTA+GGG | + | chr4.1:12941780-12941799 | MS.gene058823:CDS | 30.0% | |
| TCTTTACTATCAAAGTCAGT+GGG | - | chr4.1:12940916-12940935 | None:intergenic | 30.0% | |
| TTACTTCAGAGAAAAGTTAG+GGG | + | chr4.1:12941781-12941800 | MS.gene058823:CDS | 30.0% | |
| TTCTAACTATTATCAGCTTC+AGG | + | chr4.1:12941888-12941907 | MS.gene058823:CDS | 30.0% | |
| TTCTTTACTATCAAAGTCAG+TGG | - | chr4.1:12940917-12940936 | None:intergenic | 30.0% | |
| TTGATGCTCTTGAAAATCTA+AGG | + | chr4.1:12940594-12940613 | MS.gene058823:CDS | 30.0% | |
| ! | TATTGTTGGAATTCCTGTTT+TGG | + | chr4.1:12941351-12941370 | MS.gene058823:CDS | 30.0% |
| ! | TCACAAACTGTTGATAAAAC+TGG | + | chr4.1:12941127-12941146 | MS.gene058823:CDS | 30.0% |
| ! | TGAAAGTGTATGGAATTATC+TGG | + | chr4.1:12941831-12941850 | MS.gene058823:CDS | 30.0% |
| AGATCAACCATAGTAAGATC+AGG | - | chr4.1:12940950-12940969 | None:intergenic | 35.0% | |
| ATATCCACACATGTTGAATC+AGG | + | chr4.1:12942158-12942177 | MS.gene058823:CDS | 35.0% | |
| ATGGACAGGATTGGAAATTA+TGG | + | chr4.1:12942447-12942466 | MS.gene058823:CDS | 35.0% | |
| CAAACAACTTTCAACTGATG+AGG | + | chr4.1:12940820-12940839 | MS.gene058823:CDS | 35.0% | |
| CAATCACATCAATTAACCTC+CGG | - | chr4.1:12942230-12942249 | None:intergenic | 35.0% | |
| CCTTACTTCAGAGAAAAGTT+AGG | + | chr4.1:12941779-12941798 | MS.gene058823:CDS | 35.0% | |
| CTTATTGGAAAATTGTGCTC+CGG | + | chr4.1:12942208-12942227 | MS.gene058823:CDS | 35.0% | |
| CTTGAGGAAGCCAAATTTAT+TGG | + | chr4.1:12941721-12941740 | MS.gene058823:CDS | 35.0% | |
| CTTTACTATCAAAGTCAGTG+GGG | - | chr4.1:12940915-12940934 | None:intergenic | 35.0% | |
| GAATCAGGCTTATGATTTGA+AGG | + | chr4.1:12942173-12942192 | MS.gene058823:CDS | 35.0% | |
| GTCTTGGTTATGTTTGTGTA+AGG | + | chr4.1:12941236-12941255 | MS.gene058823:CDS | 35.0% | |
| GTTGATCATCAACATCAACA+TGG | - | chr4.1:12940514-12940533 | None:intergenic | 35.0% | |
| GTTTGTGTAAGGAATCGAAT+TGG | + | chr4.1:12941247-12941266 | MS.gene058823:CDS | 35.0% | |
| TGATACCAGCTAATGATTCA+AGG | - | chr4.1:12940700-12940719 | None:intergenic | 35.0% | |
| TGGACAAGGAATTTGTACAA+GGG | + | chr4.1:12940730-12940749 | MS.gene058823:CDS | 35.0% | |
| TGGACAGGATTGGAAATTAT+GGG | + | chr4.1:12942448-12942467 | MS.gene058823:CDS | 35.0% | |
| TGTGAATGTTGATCTGCAAA+AGG | + | chr4.1:12942281-12942300 | MS.gene058823:CDS | 35.0% | |
| TGTGTGGATATTTCATAAGC+TGG | - | chr4.1:12942149-12942168 | None:intergenic | 35.0% | |
| TGTTGAAAGTAATGCCACTA+AGG | + | chr4.1:12941672-12941691 | MS.gene058823:CDS | 35.0% | |
| TTACTACTTGTGAGTCGATA+AGG | + | chr4.1:12941101-12941120 | MS.gene058823:CDS | 35.0% | |
| TTATACTCCAAAACAAGCTC+TGG | - | chr4.1:12940797-12940816 | None:intergenic | 35.0% | |
| TTGATCTCCAACAACAACAA+TGG | - | chr4.1:12940657-12940676 | None:intergenic | 35.0% | |
| TTTCCAATAAGCTGTCAATC+TGG | - | chr4.1:12942199-12942218 | None:intergenic | 35.0% | |
| ! | ATCAAGTTTGTTTGCCTTTG+TGG | - | chr4.1:12940468-12940487 | None:intergenic | 35.0% |
| ! | GAACTTTGATTTCCTCCATT+AGG | - | chr4.1:12941702-12941721 | None:intergenic | 35.0% |
| !! | AATTTGTACAAGGGTACCTT+TGG | + | chr4.1:12940739-12940758 | MS.gene058823:CDS | 35.0% |
| !!! | CCTAACTTTTCTCTGAAGTA+AGG | - | chr4.1:12941782-12941801 | None:intergenic | 35.0% |
| !!! | GAGCTTGTTTTGGAGTATAA+TGG | + | chr4.1:12940797-12940816 | MS.gene058823:CDS | 35.0% |
| AAGAGTCTTACGAAGATGCA+AGG | + | chr4.1:12941272-12941291 | MS.gene058823:CDS | 40.0% | |
| AAGGCTGATAAATCTCCTGA+AGG | + | chr4.1:12941175-12941194 | MS.gene058823:CDS | 40.0% | |
| AAGGTCAGAAAAGCAGTTCT+TGG | - | chr4.1:12941763-12941782 | None:intergenic | 40.0% | |
| ACAATTGGTGCAACAGATAG+AGG | - | chr4.1:12940542-12940561 | None:intergenic | 40.0% | |
| ACAGCTGACGATGTTAACAT+TGG | + | chr4.1:12941214-12941233 | MS.gene058823:CDS | 40.0% | |
| AGGAGTCTCCTTCAATATCA+GGG | + | chr4.1:12942358-12942377 | MS.gene058823:CDS | 40.0% | |
| AGTGTCCTTGAATCATTAGC+TGG | + | chr4.1:12940692-12940711 | MS.gene058823:CDS | 40.0% | |
| ATAACTCGTGTTCCTGTTCA+TGG | + | chr4.1:12940977-12940996 | MS.gene058823:CDS | 40.0% | |
| CACTAAGGATTTCCTAATGG+AGG | + | chr4.1:12941687-12941706 | MS.gene058823:CDS | 40.0% | |
| CGTCTCAACATTGCTAAAGA+GGG | + | chr4.1:12940617-12940636 | MS.gene058823:CDS | 40.0% | |
| CTCCATTAGGAAATCCTTAG+TGG | - | chr4.1:12941689-12941708 | None:intergenic | 40.0% | |
| CTTACTATGGTTGATCTTCC+AGG | + | chr4.1:12940953-12940972 | MS.gene058823:CDS | 40.0% | |
| GAACTGTTATCAGCAAATGG+TGG | + | chr4.1:12942315-12942334 | MS.gene058823:CDS | 40.0% | |
| GATTTGCAGAAAAGCTGACA+TGG | - | chr4.1:12941515-12941534 | None:intergenic | 40.0% | |
| GCAGTTCTTGGCATGAAATT+CGG | - | chr4.1:12941751-12941770 | None:intergenic | 40.0% | |
| GGACAGGATTGGAAATTATG+GGG | + | chr4.1:12942449-12942468 | MS.gene058823:CDS | 40.0% | |
| GGAGGAAATCAAAGTTCTTG+AGG | + | chr4.1:12941705-12941724 | MS.gene058823:CDS | 40.0% | |
| GTGGACAAGGAATTTGTACA+AGG | + | chr4.1:12940729-12940748 | MS.gene058823:CDS | 40.0% | |
| GTTGTTGGAGATCAATCATC+TGG | + | chr4.1:12940662-12940681 | MS.gene058823:CDS | 40.0% | |
| TAAATCTCCTGAAGGTTTGC+TGG | + | chr4.1:12941183-12941202 | MS.gene058823:CDS | 40.0% | |
| TAAGCCTGATTCAACATGTG+TGG | - | chr4.1:12942165-12942184 | None:intergenic | 40.0% | |
| TATACTCCTCCAAGTACTCA+GGG | - | chr4.1:12942023-12942042 | None:intergenic | 40.0% | |
| TCCAATCCTGTCCATAATGT+TGG | - | chr4.1:12942442-12942461 | None:intergenic | 40.0% | |
| TCTCCAACAACAACAATGGT+TGG | - | chr4.1:12940653-12940672 | None:intergenic | 40.0% | |
| TGCCACTAAGGATTTCCTAA+TGG | + | chr4.1:12941684-12941703 | MS.gene058823:CDS | 40.0% | |
| TGCTATAAATACAGCCACTG+AGG | + | chr4.1:12940856-12940875 | MS.gene058823:CDS | 40.0% | |
| TGGAAACAAGAGTTCCACAA+AGG | + | chr4.1:12940451-12940470 | MS.gene058823:CDS | 40.0% | |
| TGGAGTTCCTGATCTTACTA+TGG | + | chr4.1:12940940-12940959 | MS.gene058823:CDS | 40.0% | |
| TGTCTCTTCCCTGATATTGA+AGG | - | chr4.1:12942369-12942388 | None:intergenic | 40.0% | |
| TTATACTCCTCCAAGTACTC+AGG | - | chr4.1:12942024-12942043 | None:intergenic | 40.0% | |
| ! | ACAAGCTTTTGAGCCAAAAC+AGG | - | chr4.1:12941367-12941386 | None:intergenic | 40.0% |
| ! | CTTCCAACCATTGTTGTTGT+TGG | + | chr4.1:12940647-12940666 | MS.gene058823:CDS | 40.0% |
| ! | GACGATGTTAACATTGGTCT+TGG | + | chr4.1:12941220-12941239 | MS.gene058823:CDS | 40.0% |
| ! | TCAAGTACTGTGAAGCTGAA+AGG | + | chr4.1:12942102-12942121 | MS.gene058823:CDS | 40.0% |
| ! | TTTTGCAGCCTCATAACCAA+AGG | - | chr4.1:12940758-12940777 | None:intergenic | 40.0% |
| !! | TTATCAGGTTGACCATGAAC+AGG | - | chr4.1:12940992-12941011 | None:intergenic | 40.0% |
| !!! | TTTTCAAGAGCATCAAGCAC+TGG | - | chr4.1:12940590-12940609 | None:intergenic | 40.0% |
| ACAGGAACACGAGTTATACC+TGG | - | chr4.1:12940974-12940993 | None:intergenic | 45.0% | |
| AGCTTGAAGCACATGCTGAA+TGG | - | chr4.1:12941965-12941984 | None:intergenic | 45.0% | |
| AGGCCAGATTGACAGCTTAT+TGG | + | chr4.1:12942193-12942212 | MS.gene058823:CDS | 45.0% | |
| ATGTAACCCTGAGTACTTGG+AGG | + | chr4.1:12942014-12942033 | MS.gene058823:CDS | 45.0% | |
| ATTGGAAAATTGTGCTCCGG+AGG | + | chr4.1:12942211-12942230 | MS.gene058823:CDS | 45.0% | |
| CACATGTAACCCTGAGTACT+TGG | + | chr4.1:12942011-12942030 | MS.gene058823:CDS | 45.0% | |
| CTGTTATCAGCAAATGGTGG+TGG | + | chr4.1:12942318-12942337 | MS.gene058823:CDS | 45.0% | |
| GAAAGAAAGCAAAGAGACCG+TGG | + | chr4.1:12942416-12942435 | MS.gene058823:CDS | 45.0% | |
| GAGGAGTCTCCTTCAATATC+AGG | + | chr4.1:12942357-12942376 | MS.gene058823:CDS | 45.0% | |
| GCCAACATTATGGACAGGAT+TGG | + | chr4.1:12942438-12942457 | MS.gene058823:CDS | 45.0% | |
| GCCAGTGAGGATAAATTAGC+AGG | - | chr4.1:12941487-12941506 | None:intergenic | 45.0% | |
| GCCTGCTAATTTATCCTCAC+TGG | + | chr4.1:12941483-12941502 | MS.gene058823:CDS | 45.0% | |
| GCGTCTCAACATTGCTAAAG+AGG | + | chr4.1:12940616-12940635 | MS.gene058823:CDS | 45.0% | |
| GTACAAATTCCTTGTCCACG+TGG | - | chr4.1:12940728-12940747 | None:intergenic | 45.0% | |
| TATCAAAGTCAGTGGGGTGT+TGG | - | chr4.1:12940909-12940928 | None:intergenic | 45.0% | |
| TGTGCTTCAAGCTGTTGAGA+TGG | + | chr4.1:12941972-12941991 | MS.gene058823:CDS | 45.0% | |
| ! | ACTGTGAAGCTGAAAGGTGT+TGG | + | chr4.1:12942108-12942127 | MS.gene058823:CDS | 45.0% |
| ! | GGAGGAGTATAACAAGCTGA+TGG | + | chr4.1:12942032-12942051 | MS.gene058823:CDS | 45.0% |
| !! | CAAGGGTACCTTTGGTTATG+AGG | + | chr4.1:12940747-12940766 | MS.gene058823:CDS | 45.0% |
| ACCTTCTCCAGCAAACCTTC+AGG | - | chr4.1:12941193-12941212 | None:intergenic | 50.0% | |
| AGAGACCGTGGCCAACATTA+TGG | + | chr4.1:12942428-12942447 | MS.gene058823:CDS | 50.0% | |
| AGTGTCACACACTTCTGTCC+AGG | + | chr4.1:12941317-12941336 | MS.gene058823:CDS | 50.0% | |
| CCTGTCCATAATGTTGGCCA+CGG | - | chr4.1:12942436-12942455 | None:intergenic | 50.0% | |
| GCTCTGGCTGTGGAAGTAAA+TGG | - | chr4.1:12940781-12940800 | None:intergenic | 50.0% | |
| GGAAGAGACAGAAGTTGAGC+AGG | + | chr4.1:12942379-12942398 | MS.gene058823:CDS | 50.0% | |
| GGTGCAACAGATAGAGGTTG+AGG | - | chr4.1:12940536-12940555 | None:intergenic | 50.0% | |
| ! | GGCTACTAGTTTGCATGAGC+TGG | + | chr4.1:12941453-12941472 | MS.gene058823:CDS | 50.0% |
| ! | TCCAAAACAAGCTCTGGCTG+TGG | - | chr4.1:12940791-12940810 | None:intergenic | 50.0% |
| !! | AACGCTTGCTGTCGTGACAA+AGG | + | chr4.1:12941156-12941175 | MS.gene058823:CDS | 50.0% |
| !! | CAAATGGTGGTGGTGTTGAG+AGG | + | chr4.1:12942328-12942347 | MS.gene058823:CDS | 50.0% |
| !! | TCCACAGCCAGAGCTTGTTT+TGG | + | chr4.1:12940787-12940806 | MS.gene058823:CDS | 50.0% |
| !! | TCCTGAAGGTTTGCTGGAGA+AGG | + | chr4.1:12941189-12941208 | MS.gene058823:CDS | 50.0% |
| !! | TGGGGTGTTGGAAATCCCTT+TGG | - | chr4.1:12940897-12940916 | None:intergenic | 50.0% |
| ATCAGCTTGCCACGTGGACA+AGG | + | chr4.1:12940716-12940735 | MS.gene058823:CDS | 55.0% | |
| CCGTGGCCAACATTATGGAC+AGG | + | chr4.1:12942433-12942452 | MS.gene058823:CDS | 55.0% | |
| TGACATGGCATCAGCCAGTG+AGG | - | chr4.1:12941500-12941519 | None:intergenic | 55.0% | |
| ! | TGGTGTTGAGAGGCTGCTTG+AGG | + | chr4.1:12942338-12942357 | MS.gene058823:CDS | 55.0% |
| !! | AGCTTGCTGGCACTGCCAAA+GGG | + | chr4.1:12940879-12940898 | MS.gene058823:CDS | 55.0% |
| ACAGCCACTGAGGAGCTTGC+TGG | + | chr4.1:12940866-12940885 | MS.gene058823:CDS | 60.0% | |
| AGTGCCAGCAAGCTCCTCAG+TGG | - | chr4.1:12940873-12940892 | None:intergenic | 60.0% | |
| GCTGGTATCAGCTTGCCACG+TGG | + | chr4.1:12940710-12940729 | MS.gene058823:CDS | 60.0% | |
| !! | GAGCTTGCTGGCACTGCCAA+AGG | + | chr4.1:12940878-12940897 | MS.gene058823:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 12940443 | 12942479 | 12940443 | ID=MS.gene058823 |
| chr4.1 | mRNA | 12940443 | 12942479 | 12940443 | ID=MS.gene058823.t1;Parent=MS.gene058823 |
| chr4.1 | exon | 12940443 | 12942479 | 12940443 | ID=MS.gene058823.t1.exon1;Parent=MS.gene058823.t1 |
| chr4.1 | CDS | 12940443 | 12942479 | 12940443 | ID=cds.MS.gene058823.t1;Parent=MS.gene058823.t1 |
| Gene Sequence |
| Protein sequence |
