Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22508.t1 | XP_003625933.2 | 91.7 | 635 | 2 | 1 | 1 | 584 | 1 | 635 | 0.00E+00 | 1107.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22508.t1 | A2XL32 | 70.8 | 592 | 122 | 1 | 2 | 542 | 1 | 592 | 9.1e-232 | 804.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22508.t1 | G7KSQ0 | 91.7 | 635 | 2 | 1 | 1 | 584 | 1 | 635 | 0.0e+00 | 1107.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061793 | MS.gene22508 | PPI |
| MS.gene045131 | MS.gene22508 | PPI |
| MS.gene22508 | MS.gene91938 | PPI |
| MS.gene91939 | MS.gene22508 | PPI |
| MS.gene032807 | MS.gene22508 | PPI |
| MS.gene49566 | MS.gene22508 | PPI |
| MS.gene75490 | MS.gene22508 | PPI |
| MS.gene28063 | MS.gene22508 | PPI |
| MS.gene22508 | MS.gene030824 | PPI |
| MS.gene57306 | MS.gene22508 | PPI |
| MS.gene052190 | MS.gene22508 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22508.t1 | MTR_7g109150 | 91.654 | 635 | 2 | 1 | 1 | 584 | 1 | 635 | 0.0 | 1180 |
| MS.gene22508.t1 | MTR_4g031150 | 66.774 | 623 | 156 | 1 | 1 | 572 | 50 | 672 | 0.0 | 835 |
| MS.gene22508.t1 | MTR_1g073840 | 38.737 | 586 | 296 | 11 | 5 | 535 | 29 | 606 | 2.97e-116 | 363 |
| MS.gene22508.t1 | MTR_1g044210 | 36.555 | 569 | 297 | 12 | 5 | 516 | 28 | 589 | 2.64e-102 | 326 |
| MS.gene22508.t1 | MTR_7g116330 | 34.572 | 619 | 312 | 15 | 5 | 547 | 34 | 635 | 5.63e-98 | 315 |
| MS.gene22508.t1 | MTR_1g079790 | 34.810 | 632 | 336 | 15 | 3 | 572 | 26 | 643 | 1.71e-96 | 311 |
| MS.gene22508.t1 | MTR_1g079790 | 34.982 | 566 | 305 | 11 | 3 | 510 | 26 | 586 | 2.33e-91 | 294 |
| MS.gene22508.t1 | MTR_5g022470 | 33.333 | 258 | 146 | 4 | 283 | 516 | 499 | 754 | 2.92e-35 | 142 |
| MS.gene22508.t1 | MTR_5g022470 | 33.333 | 258 | 146 | 4 | 283 | 516 | 499 | 754 | 3.21e-35 | 142 |
| MS.gene22508.t1 | MTR_3g105590 | 30.252 | 357 | 192 | 13 | 243 | 545 | 310 | 663 | 1.75e-33 | 137 |
| MS.gene22508.t1 | MTR_8g080770 | 30.357 | 280 | 162 | 4 | 284 | 531 | 274 | 552 | 9.73e-33 | 134 |
| MS.gene22508.t1 | MTR_8g080770 | 30.357 | 280 | 162 | 4 | 284 | 531 | 383 | 661 | 1.11e-32 | 134 |
| MS.gene22508.t1 | MTR_8g075340 | 31.641 | 256 | 153 | 3 | 283 | 516 | 461 | 716 | 1.81e-32 | 134 |
| MS.gene22508.t1 | MTR_3g085130 | 28.716 | 296 | 173 | 5 | 284 | 542 | 228 | 522 | 4.44e-32 | 132 |
| MS.gene22508.t1 | MTR_3g085130 | 27.961 | 304 | 179 | 5 | 284 | 551 | 438 | 737 | 4.89e-32 | 132 |
| MS.gene22508.t1 | MTR_8g106150 | 31.148 | 305 | 155 | 6 | 287 | 537 | 134 | 437 | 9.70e-30 | 125 |
| MS.gene22508.t1 | MTR_8g106150 | 31.148 | 305 | 155 | 6 | 287 | 537 | 377 | 680 | 1.41e-29 | 125 |
| MS.gene22508.t1 | MTR_5g097410 | 30.389 | 283 | 158 | 5 | 287 | 531 | 611 | 892 | 2.46e-29 | 124 |
| MS.gene22508.t1 | MTR_1g013360 | 30.348 | 201 | 127 | 6 | 243 | 432 | 316 | 514 | 8.73e-21 | 97.4 |
| MS.gene22508.t1 | MTR_1g013360 | 38.393 | 112 | 64 | 3 | 433 | 541 | 585 | 694 | 1.02e-11 | 68.6 |
| MS.gene22508.t1 | MTR_1g087140 | 28.939 | 311 | 170 | 12 | 273 | 540 | 373 | 675 | 7.13e-19 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22508.t1 | AT2G40940 | 69.950 | 599 | 129 | 1 | 2 | 549 | 1 | 599 | 0.0 | 825 |
| MS.gene22508.t1 | AT1G66340 | 64.469 | 622 | 166 | 2 | 2 | 572 | 1 | 618 | 0.0 | 786 |
| MS.gene22508.t1 | AT3G23150 | 37.610 | 569 | 283 | 13 | 5 | 511 | 32 | 590 | 5.81e-103 | 323 |
| MS.gene22508.t1 | AT3G23150 | 37.805 | 574 | 285 | 13 | 5 | 516 | 32 | 595 | 3.11e-102 | 327 |
| MS.gene22508.t1 | AT3G04580 | 33.333 | 633 | 350 | 13 | 4 | 572 | 26 | 650 | 4.05e-92 | 300 |
| MS.gene22508.t1 | AT3G04580 | 33.333 | 633 | 350 | 13 | 4 | 572 | 26 | 650 | 4.05e-92 | 300 |
| MS.gene22508.t1 | AT1G04310 | 33.723 | 513 | 266 | 11 | 5 | 446 | 34 | 543 | 1.43e-71 | 242 |
| MS.gene22508.t1 | AT1G04310 | 33.723 | 513 | 266 | 11 | 5 | 446 | 34 | 543 | 1.43e-71 | 242 |
| MS.gene22508.t1 | AT5G10720 | 32.500 | 320 | 186 | 8 | 272 | 568 | 339 | 651 | 2.04e-38 | 152 |
| MS.gene22508.t1 | AT1G27320 | 30.421 | 309 | 184 | 4 | 253 | 531 | 410 | 717 | 3.09e-35 | 142 |
| MS.gene22508.t1 | AT2G17820 | 32.246 | 276 | 161 | 5 | 263 | 516 | 472 | 743 | 3.59e-35 | 142 |
| MS.gene22508.t1 | AT5G35750 | 27.701 | 361 | 217 | 9 | 219 | 542 | 516 | 869 | 7.79e-32 | 132 |
| MS.gene22508.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene22508.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene22508.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene22508.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene22508.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 455 | 758 | 3.49e-30 | 127 |
| MS.gene22508.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 466 | 769 | 3.77e-30 | 127 |
| MS.gene22508.t1 | AT2G47430 | 27.491 | 291 | 167 | 10 | 283 | 535 | 385 | 669 | 1.31e-16 | 84.3 |
| MS.gene22508.t1 | AT4G16250 | 23.984 | 246 | 160 | 8 | 275 | 516 | 914 | 1136 | 8.10e-12 | 68.9 |
Find 133 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCACATGCTGCTATTT+TGG | 0.127774 | 7.3:+5825030 | MS.gene22508:CDS |
| TTTGTGCAGGTTAAGGATTC+TGG | 0.190806 | 7.3:+5825979 | MS.gene22508:intron |
| AATCAACCTTCATGGTGTTT+TGG | 0.215357 | 7.3:+5825360 | MS.gene22508:CDS |
| CTGCTTTCTTTCCATATAGA+TGG | 0.223591 | 7.3:+5823208 | MS.gene22508:CDS |
| GTGGAGTTGGGTAGGACTTT+AGG | 0.238818 | 7.3:+5823573 | MS.gene22508:CDS |
| GATGGGTTCTTATGCAGTTT+GGG | 0.252158 | 7.3:+5823226 | MS.gene22508:CDS |
| AGCATTGTCATCACTTCTTT+TGG | 0.253771 | 7.3:+5825201 | MS.gene22508:CDS |
| CGCCAATCCTGTAAGGATTC+TGG | 0.273695 | 7.3:-5825669 | None:intergenic |
| TTGGACTAGCTATTTGTAAA+AGG | 0.274567 | 7.3:+5826094 | MS.gene22508:CDS |
| GCTCTTCCGCCTTGTTCTTA+AGG | 0.299367 | 7.3:-5823434 | None:intergenic |
| AGATGGGTTCTTATGCAGTT+TGG | 0.302430 | 7.3:+5823225 | MS.gene22508:CDS |
| ACAAGGCGGAAGAGCTTGAT+AGG | 0.308682 | 7.3:+5823442 | MS.gene22508:CDS |
| TGCAAAACCAGAATCCTTAC+AGG | 0.315260 | 7.3:+5825662 | MS.gene22508:CDS |
| TTAAAGTATGAGAAAGTTGT+AGG | 0.315493 | 7.3:-5823641 | None:intergenic |
| TGCATAAGAACCCATCTATA+TGG | 0.316824 | 7.3:-5823219 | None:intergenic |
| CAACATTCTCACATGTCTTC+CGG | 0.319637 | 7.3:-5823496 | None:intergenic |
| ATCTCATGGGTGGGCACATA+TGG | 0.329280 | 7.3:+5826259 | MS.gene22508:CDS |
| CACCTGAAGTTGTTGCGGTT+CGG | 0.344532 | 7.3:+5823802 | MS.gene22508:CDS |
| TCTAGCAGTGGTTCAGGTCT+TGG | 0.350863 | 7.3:+5826075 | MS.gene22508:CDS |
| ATTGAAGAGTAGTAATGTTT+TGG | 0.359573 | 7.3:+5825267 | MS.gene22508:CDS |
| CTGAAGACTTCATTGACAAT+AGG | 0.366052 | 7.3:-5823705 | None:intergenic |
| GAATGTTGACTCATGAAATT+AGG | 0.375510 | 7.3:+5823511 | MS.gene22508:CDS |
| GAGAGCGAGGGTCACGATAA+AGG | 0.377013 | 7.3:+5826285 | MS.gene22508:CDS |
| ACCTGAAGTTGTTGCGGTTC+GGG | 0.378789 | 7.3:+5823803 | MS.gene22508:CDS |
| CTCTCGCCGAGCTAAATCTA+AGG | 0.393829 | 7.3:-5825098 | None:intergenic |
| ATGGCATGAGTAGGTAGATC+AGG | 0.413426 | 7.3:-5825543 | None:intergenic |
| GTTCGATCTAGCAGTGGTTC+AGG | 0.425531 | 7.3:+5826069 | MS.gene22508:CDS |
| CTCCACTTCCACTATATGCT+TGG | 0.434484 | 7.3:-5826386 | None:intergenic |
| AAATTAGGAGCACTCTTGAT+AGG | 0.435699 | 7.3:+5823526 | MS.gene22508:CDS |
| GGGGCAAGAATTAAAGTAAT+GGG | 0.436802 | 7.3:-5825522 | None:intergenic |
| GAGTTGATCCCGGGCTCGCA+TGG | 0.439303 | 7.3:-5825059 | None:intergenic |
| TACTTGACAAGAAGTTCATC+TGG | 0.439756 | 7.3:-5823108 | None:intergenic |
| AGCTCGGCGAGAGGCTGAAA+TGG | 0.447274 | 7.3:+5825108 | MS.gene22508:CDS |
| AGGTTCAAACCACTTCTTGA+TGG | 0.447911 | 7.3:-5823621 | None:intergenic |
| GCTACATTTGTAGTCAAACT+TGG | 0.452125 | 7.3:+5826315 | MS.gene22508:CDS |
| GGGTAGGACTTTAGGATTGG+AGG | 0.452722 | 7.3:+5823581 | MS.gene22508:CDS |
| ACCCGAACCGCAACAACTTC+AGG | 0.453206 | 7.3:-5823804 | None:intergenic |
| GGCCAAGCATATAGTGGAAG+TGG | 0.455936 | 7.3:+5826384 | MS.gene22508:CDS |
| ATTCAGATTTGTAAATCTCA+TGG | 0.457675 | 7.3:+5826245 | MS.gene22508:intron |
| ATTCTTACTCAGGAAGAAAC+CGG | 0.461381 | 7.3:+5823477 | MS.gene22508:CDS |
| CCAAAATAGCAGCATGTGAA+AGG | 0.461533 | 7.3:-5825030 | None:intergenic |
| TTGTTCCATGAGTTGATCCC+GGG | 0.464658 | 7.3:-5825068 | None:intergenic |
| AGCAGAGGCCAAGCATATAG+TGG | 0.467264 | 7.3:+5826378 | MS.gene22508:CDS |
| AGAAGTTCATCTGGAGGATA+AGG | 0.468819 | 7.3:-5823099 | None:intergenic |
| TTGACAATAGGAAGGTTTGT+TGG | 0.470136 | 7.3:-5823693 | None:intergenic |
| AAAGACCACTCTTGTGGAGT+TGG | 0.471472 | 7.3:+5823560 | MS.gene22508:CDS |
| TGGTAGCCTTGAATTAGAAA+TGG | 0.472836 | 7.3:+5825333 | MS.gene22508:CDS |
| GTAGTCAAACTTGGGATTTG+TGG | 0.473180 | 7.3:+5826324 | MS.gene22508:CDS |
| TGCTTTCTTTCCATATAGAT+GGG | 0.474314 | 7.3:+5823209 | MS.gene22508:CDS |
| TTTGTTCCATGAGTTGATCC+CGG | 0.480126 | 7.3:-5825069 | None:intergenic |
| AAGACCACTCTTGTGGAGTT+GGG | 0.480183 | 7.3:+5823561 | MS.gene22508:CDS |
| ACAAAATAAATGAGTTCGAC+AGG | 0.487975 | 7.3:-5823177 | None:intergenic |
| TCTATCATAACCCTCTGCTC+TGG | 0.492566 | 7.3:-5825238 | None:intergenic |
| GTTGGGTAGGACTTTAGGAT+TGG | 0.493614 | 7.3:+5823578 | MS.gene22508:CDS |
| TGGAGGAGTCCATGCGAGCC+CGG | 0.494071 | 7.3:+5825050 | MS.gene22508:CDS |
| TGTGGTATACGCATAGCTCT+CGG | 0.503245 | 7.3:-5823732 | None:intergenic |
| GAACCACTGCTAGATCGAAC+AGG | 0.510532 | 7.3:-5826066 | None:intergenic |
| GGAGGAGTCCATGCGAGCCC+GGG | 0.516805 | 7.3:+5825051 | MS.gene22508:CDS |
| GTTCTTAAGGAACAACTCAC+GGG | 0.520997 | 7.3:-5823421 | None:intergenic |
| AACCAGAATCCTTACAGGAT+TGG | 0.521860 | 7.3:+5825667 | MS.gene22508:CDS |
| TTCAGATTTGTAAATCTCAT+GGG | 0.524035 | 7.3:+5826246 | MS.gene22508:intron |
| TCTGCTTGCAGCTTGATGAT+CGG | 0.525516 | 7.3:-5826361 | None:intergenic |
| AGGAGGTCGCCAATCCTGTA+AGG | 0.525729 | 7.3:-5825676 | None:intergenic |
| AAATGACCATCACTTGATGC+TGG | 0.529879 | 7.3:-5825708 | None:intergenic |
| GGAAGAGCTTGATAGGGAGA+TGG | 0.530026 | 7.3:+5823449 | MS.gene22508:CDS |
| CTACATTTGTAGTCAAACTT+GGG | 0.530312 | 7.3:+5826316 | MS.gene22508:CDS |
| GTGGTATACGCATAGCTCTC+GGG | 0.531017 | 7.3:-5823731 | None:intergenic |
| TGTTCTTAAGGAACAACTCA+CGG | 0.533686 | 7.3:-5823422 | None:intergenic |
| GATGGGACTTATTCTTACTC+AGG | 0.538781 | 7.3:+5823467 | MS.gene22508:CDS |
| ATGGGTTCTTATGCAGTTTG+GGG | 0.539955 | 7.3:+5823227 | MS.gene22508:CDS |
| TTAACTTATCATGTACAAGT+TGG | 0.540061 | 7.3:+5823660 | MS.gene22508:CDS |
| GATCTGTCCCGACTGGAAGA+TGG | 0.542916 | 7.3:+5825313 | MS.gene22508:CDS |
| TTACTCAATGATGACGACAT+AGG | 0.543430 | 7.3:+5826429 | MS.gene22508:CDS |
| AGGGGCAAGAATTAAAGTAA+TGG | 0.544261 | 7.3:-5825523 | None:intergenic |
| ACTCTGAGACTGAGTAAACT+TGG | 0.544636 | 7.3:-5826040 | None:intergenic |
| TCATTTCTATATACGAGTCC+AGG | 0.548157 | 7.3:+5825725 | MS.gene22508:CDS |
| GAAGAGCTTGATAGGGAGAT+GGG | 0.548570 | 7.3:+5823450 | MS.gene22508:CDS |
| CAATGCTGTCAAATATACTA+AGG | 0.548729 | 7.3:+5825611 | MS.gene22508:CDS |
| CATGGGTGGGCACATATGGA+TGG | 0.549664 | 7.3:+5826263 | MS.gene22508:CDS |
| GCGAGCCCGGGATCAACTCA+TGG | 0.550447 | 7.3:+5825063 | MS.gene22508:CDS |
| CTGAACTGAATCCAGAGCAG+AGG | 0.550673 | 7.3:+5825227 | MS.gene22508:CDS |
| AAGGCTACCATCTTCCAGTC+GGG | 0.554665 | 7.3:-5825320 | None:intergenic |
| CAAAATAGCAGCATGTGAAA+GGG | 0.558668 | 7.3:-5825029 | None:intergenic |
| CTTGATGCTGGATAAAACTC+AGG | 0.561674 | 7.3:-5825696 | None:intergenic |
| CAGGTTAAGGATTCTGGATG+TGG | 0.561926 | 7.3:+5825985 | MS.gene22508:intron |
| CTTGCAGCTTGATGATCGGA+TGG | 0.567335 | 7.3:-5826357 | None:intergenic |
| CAAGGCGGAAGAGCTTGATA+GGG | 0.569408 | 7.3:+5823443 | MS.gene22508:CDS |
| TGGCATGAGTAGGTAGATCA+GGG | 0.573826 | 7.3:-5825542 | None:intergenic |
| AGATTTGTAAATCTCATGGG+TGG | 0.574861 | 7.3:+5826249 | MS.gene22508:intron |
| ACGTTGCCTTAGATTTAGCT+CGG | 0.574999 | 7.3:+5825092 | MS.gene22508:CDS |
| TGCTGTCAAATATACTAAGG+AGG | 0.577420 | 7.3:+5825614 | MS.gene22508:CDS |
| GCTGTCAAATATACTAAGGA+GGG | 0.577474 | 7.3:+5825615 | MS.gene22508:CDS |
| TATTCTAAAGACCACTCTTG+TGG | 0.580698 | 7.3:+5823554 | MS.gene22508:CDS |
| GTAAACTTGGTAAAGAGATG+TGG | 0.583173 | 7.3:-5826027 | None:intergenic |
| GCTAGGATAAGACCTCTTGT+CGG | 0.586111 | 7.3:+5823768 | MS.gene22508:CDS |
| TGTTCTAGATCTGTCCCGAC+TGG | 0.586169 | 7.3:+5825306 | MS.gene22508:CDS |
| CACACACTTGTCCACTTGCT+AGG | 0.588144 | 7.3:+5823751 | MS.gene22508:CDS |
| TTTCATGATTCATGACTGCA+AGG | 0.589191 | 7.3:-5825153 | None:intergenic |
| CCACTCTTGTGGAGTTGGGT+AGG | 0.594476 | 7.3:+5823565 | MS.gene22508:CDS |
| GATTTGTAAATCTCATGGGT+GGG | 0.596709 | 7.3:+5826250 | MS.gene22508:intron |
| AGACTTCATTGACAATAGGA+AGG | 0.597850 | 7.3:-5823701 | None:intergenic |
| GTAAGTGCTTAAATCTAGCA+AGG | 0.598885 | 7.3:-5826410 | None:intergenic |
| CAAGGCTACCATCTTCCAGT+CGG | 0.599285 | 7.3:-5825321 | None:intergenic |
| TGAGTTGTTCCTTAAGAACA+AGG | 0.610418 | 7.3:+5823425 | MS.gene22508:CDS |
| GCACATATGGATGGAGAGCG+AGG | 0.610844 | 7.3:+5826272 | MS.gene22508:CDS |
| GGCACATATCTTCCGACAAG+AGG | 0.613814 | 7.3:-5823780 | None:intergenic |
| TGAACTGAATCCAGAGCAGA+GGG | 0.614850 | 7.3:+5825228 | MS.gene22508:CDS |
| AAGAGATGTGGAATATCTTG+TGG | 0.615014 | 7.3:-5826015 | None:intergenic |
| AGAGGTCTTATCCTAGCAAG+TGG | 0.615685 | 7.3:-5823762 | None:intergenic |
| TCATCACCGATGGCATGAGT+AGG | 0.616501 | 7.3:-5825552 | None:intergenic |
| CTTAGATTTAGCTCGGCGAG+AGG | 0.619358 | 7.3:+5825099 | MS.gene22508:CDS |
| AGCACACGACACTTTAGCGA+TGG | 0.621416 | 7.3:-5823334 | None:intergenic |
| GATCATCAAGCTGCAAGCAG+AGG | 0.631663 | 7.3:+5826363 | MS.gene22508:CDS |
| CGCAAGTGCGATTAGAACGT+CGG | 0.632134 | 7.3:-5823142 | None:intergenic |
| CAAGCATATAGTGGAAGTGG+AGG | 0.635632 | 7.3:+5826387 | MS.gene22508:CDS |
| ATGCCATCGGTGATGAAAAG+CGG | 0.635694 | 7.3:+5825559 | MS.gene22508:CDS |
| TGTGCCACCTGAAGTTGTTG+CGG | 0.636371 | 7.3:+5823797 | MS.gene22508:CDS |
| ATGAACAAGCATAAGTGCAG+TGG | 0.643228 | 7.3:-5823370 | None:intergenic |
| CCTACCCAACTCCACAAGAG+TGG | 0.646184 | 7.3:-5823565 | None:intergenic |
| GATCTACCTACTCATGCCAT+CGG | 0.647848 | 7.3:+5825546 | MS.gene22508:CDS |
| CCTCTCCCAAAACACCATGA+AGG | 0.651300 | 7.3:-5825366 | None:intergenic |
| CACATATGGATGGAGAGCGA+GGG | 0.654671 | 7.3:+5826273 | MS.gene22508:CDS |
| GGACCTGTTCGATCTAGCAG+TGG | 0.657911 | 7.3:+5826063 | MS.gene22508:CDS |
| CGAACCGCAACAACTTCAGG+TGG | 0.664993 | 7.3:-5823801 | None:intergenic |
| CTGTGGATGCCATCAAGAAG+TGG | 0.665478 | 7.3:+5823612 | MS.gene22508:CDS |
| TTGACAAGAAGTTCATCTGG+AGG | 0.684589 | 7.3:-5823105 | None:intergenic |
| GATGCTGGATAAAACTCAGG+AGG | 0.685050 | 7.3:-5825693 | None:intergenic |
| CTAGCAAGTGGACAAGTGTG+TGG | 0.685475 | 7.3:-5823750 | None:intergenic |
| AATGCTATAATTGCATGCAT+CGG | 0.690508 | 7.3:-5825184 | None:intergenic |
| GGCATGAGTAGGTAGATCAG+GGG | 0.696928 | 7.3:-5825541 | None:intergenic |
| AAGTTTACTCAGTCTCAGAG+TGG | 0.708425 | 7.3:+5826042 | MS.gene22508:CDS |
| GTTGTTCCTTAAGAACAAGG+CGG | 0.762407 | 7.3:+5823428 | MS.gene22508:CDS |
| GATTGGAGGAATGTGCACTG+TGG | 0.783064 | 7.3:+5823595 | MS.gene22508:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGATTTCTTTTATTTTAT+TGG | + | chr7.3:5823983-5824002 | MS.gene22508:intron | 10.0% |
| !! | AATAGTTGAAAATTAGGAAA+TGG | + | chr7.3:5824167-5824186 | MS.gene22508:intron | 20.0% |
| !! | AATTCAATCACATTAACATA+TGG | - | chr7.3:5825787-5825806 | None:intergenic | 20.0% |
| !! | AATTTCAAACACAGTTAATA+TGG | - | chr7.3:5824833-5824852 | None:intergenic | 20.0% |
| !! | CAAATTTCCAAATTAATGAT+TGG | + | chr7.3:5823844-5823863 | MS.gene22508:intron | 20.0% |
| !! | GTATTAAATACAAATATCAC+AGG | - | chr7.3:5824375-5824394 | None:intergenic | 20.0% |
| !! | TTAATATGCATTTCACATAA+GGG | - | chr7.3:5826169-5826188 | None:intergenic | 20.0% |
| !!! | AAACTTTTCATTCAATTGTA+TGG | + | chr7.3:5824771-5824790 | MS.gene22508:intron | 20.0% |
| !!! | AAAGTTTCAGGTATTTAATT+TGG | - | chr7.3:5824758-5824777 | None:intergenic | 20.0% |
| ! | AAATAACTATAAAGCCCAAA+TGG | - | chr7.3:5824207-5824226 | None:intergenic | 25.0% |
| ! | AAATTTACAACAAATGTGTG+TGG | + | chr7.3:5824673-5824692 | MS.gene22508:intron | 25.0% |
| ! | AAATTTGACAAATGTAGAAG+CGG | - | chr7.3:5823831-5823850 | None:intergenic | 25.0% |
| ! | AAGTCGATAACATAATGAAA+AGG | - | chr7.3:5825887-5825906 | None:intergenic | 25.0% |
| ! | AATAGAAAACAACGGAAATA+CGG | - | chr7.3:5824040-5824059 | None:intergenic | 25.0% |
| ! | AATTTACAACAAATGTGTGT+GGG | + | chr7.3:5824674-5824693 | MS.gene22508:intron | 25.0% |
| ! | ACAATTGAATGAAAAGTTTC+AGG | - | chr7.3:5824770-5824789 | None:intergenic | 25.0% |
| ! | ACTAAATTTAAGAACGAGAT+TGG | + | chr7.3:5824561-5824580 | MS.gene22508:intron | 25.0% |
| ! | AGAAAAGGAATAGAAAACAA+CGG | - | chr7.3:5824048-5824067 | None:intergenic | 25.0% |
| ! | ATACGGAATAGAAAATATTC+AGG | - | chr7.3:5824023-5824042 | None:intergenic | 25.0% |
| ! | ATTCAGATTTGTAAATCTCA+TGG | + | chr7.3:5826245-5826264 | MS.gene22508:intron | 25.0% |
| ! | CAACTGTTAGAAATTAATCT+AGG | + | chr7.3:5825917-5825936 | MS.gene22508:intron | 25.0% |
| ! | CTTAAGTAAAGAACCATATT+AGG | + | chr7.3:5824268-5824287 | MS.gene22508:intron | 25.0% |
| ! | GAATAAAACACTTAAAAGTC+AGG | - | chr7.3:5824701-5824720 | None:intergenic | 25.0% |
| ! | GCATAGAATAGTTGAAAATT+AGG | + | chr7.3:5824161-5824180 | MS.gene22508:intron | 25.0% |
| ! | GTTAATATGCATTTCACATA+AGG | - | chr7.3:5826170-5826189 | None:intergenic | 25.0% |
| ! | GTTAATGTGATTGAATTCTT+GGG | + | chr7.3:5825790-5825809 | MS.gene22508:intron | 25.0% |
| ! | GTTTAAGCAATCAAAAGAAA+AGG | - | chr7.3:5824063-5824082 | None:intergenic | 25.0% |
| ! | TACGGAATAGAAAATATTCA+GGG | - | chr7.3:5824022-5824041 | None:intergenic | 25.0% |
| ! | TGTTAATGTGATTGAATTCT+TGG | + | chr7.3:5825789-5825808 | MS.gene22508:intron | 25.0% |
| ! | TTAAAGTATGAGAAAGTTGT+AGG | - | chr7.3:5823644-5823663 | None:intergenic | 25.0% |
| ! | TTAACTTATCATGTACAAGT+TGG | + | chr7.3:5823660-5823679 | MS.gene22508:CDS | 25.0% |
| ! | TTCAGATTTGTAAATCTCAT+GGG | + | chr7.3:5826246-5826265 | MS.gene22508:intron | 25.0% |
| !! | ATTGAAGAGTAGTAATGTTT+TGG | + | chr7.3:5825267-5825286 | MS.gene22508:CDS | 25.0% |
| !! | CAACTCATTTTATAAATCTG+TGG | + | chr7.3:5823271-5823290 | MS.gene22508:CDS | 25.0% |
| !!! | GGTATTTAATTTGGTCTTTT+CGG | - | chr7.3:5824749-5824768 | None:intergenic | 25.0% |
| !!! | TTTTTGCCATTTCTAATTCA+AGG | - | chr7.3:5825342-5825361 | None:intergenic | 25.0% |
| AAGAACGAGATTGGAAAAAT+GGG | + | chr7.3:5824570-5824589 | MS.gene22508:intron | 30.0% | |
| AATGCTATAATTGCATGCAT+CGG | - | chr7.3:5825187-5825206 | None:intergenic | 30.0% | |
| ACAAAATAAATGAGTTCGAC+AGG | - | chr7.3:5823180-5823199 | None:intergenic | 30.0% | |
| ACTAGCTATTTGTAAAAGGT+AGG | + | chr7.3:5826098-5826117 | MS.gene22508:intron | 30.0% | |
| ATATCAGCACTAGAAAATGT+TGG | - | chr7.3:5824879-5824898 | None:intergenic | 30.0% | |
| ATTTCACATAAGGGCAATAA+TGG | - | chr7.3:5826160-5826179 | None:intergenic | 30.0% | |
| CAATACATAAATGCTGTTCA+TGG | - | chr7.3:5825440-5825459 | None:intergenic | 30.0% | |
| CAATGCTGTCAAATATACTA+AGG | + | chr7.3:5825611-5825630 | MS.gene22508:CDS | 30.0% | |
| CTACATTTGTAGTCAAACTT+GGG | + | chr7.3:5826316-5826335 | MS.gene22508:CDS | 30.0% | |
| CTAGCTATTTGTAAAAGGTA+GGG | + | chr7.3:5826099-5826118 | MS.gene22508:intron | 30.0% | |
| GAAAAGAAAACGACATAAGA+TGG | - | chr7.3:5824446-5824465 | None:intergenic | 30.0% | |
| GAAAAGGTAGAGATATCTTT+GGG | - | chr7.3:5825871-5825890 | None:intergenic | 30.0% | |
| GGCAAAAAGTTATGCAATTA+TGG | + | chr7.3:5823878-5823897 | MS.gene22508:intron | 30.0% | |
| TAAGAACGAGATTGGAAAAA+TGG | + | chr7.3:5824569-5824588 | MS.gene22508:intron | 30.0% | |
| TGAAAAGGTAGAGATATCTT+TGG | - | chr7.3:5825872-5825891 | None:intergenic | 30.0% | |
| TGCTTTCTTTCCATATAGAT+GGG | + | chr7.3:5823209-5823228 | MS.gene22508:CDS | 30.0% | |
| ! | AAATCAAAATTAGACTGGCT+CGG | - | chr7.3:5824483-5824502 | None:intergenic | 30.0% |
| ! | AACTAAATGGATTCAGCATA+CGG | - | chr7.3:5824990-5825009 | None:intergenic | 30.0% |
| ! | AATCCATTTAGTTTCCATAC+AGG | + | chr7.3:5824997-5825016 | MS.gene22508:intron | 30.0% |
| ! | CATTCAATTGTATGGCTTTT+AGG | + | chr7.3:5824779-5824798 | MS.gene22508:intron | 30.0% |
| ! | TGCTTTTCTATTGTTAATGC+AGG | + | chr7.3:5825458-5825477 | MS.gene22508:intron | 30.0% |
| ! | TTTTGGCCATTGAAGATATA+TGG | + | chr7.3:5824500-5824519 | MS.gene22508:intron | 30.0% |
| !! | GAATGTTGACTCATGAAATT+AGG | + | chr7.3:5823511-5823530 | MS.gene22508:CDS | 30.0% |
| !! | TAATTTGGTCTTTTCGGATT+AGG | - | chr7.3:5824743-5824762 | None:intergenic | 30.0% |
| !! | TAGTTATTTCTCAACCATCA+AGG | + | chr7.3:5824218-5824237 | MS.gene22508:intron | 30.0% |
| !! | TTGGACTAGCTATTTGTAAA+AGG | + | chr7.3:5826094-5826113 | MS.gene22508:CDS | 30.0% |
| !!! | AACATTTTCTAGTGCTGATA+TGG | + | chr7.3:5824878-5824897 | MS.gene22508:intron | 30.0% |
| !!! | AGCCAGTCTAATTTTGATTT+TGG | + | chr7.3:5824483-5824502 | MS.gene22508:intron | 30.0% |
| !!! | AGTTTTTTCACAGATGCTAT+AGG | - | chr7.3:5825501-5825520 | None:intergenic | 30.0% |
| AACCATATTAGGTATGCATG+TGG | + | chr7.3:5824279-5824298 | MS.gene22508:intron | 35.0% | |
| AAGAGATGTGGAATATCTTG+TGG | - | chr7.3:5826018-5826037 | None:intergenic | 35.0% | |
| AATAAGTGGCTAAAAAAGGG+AGG | + | chr7.3:5824328-5824347 | MS.gene22508:intron | 35.0% | |
| ACCATATTAGGTATGCATGT+GGG | + | chr7.3:5824280-5824299 | MS.gene22508:intron | 35.0% | |
| AGAACGAGATTGGAAAAATG+GGG | + | chr7.3:5824571-5824590 | MS.gene22508:intron | 35.0% | |
| AGACTTCATTGACAATAGGA+AGG | - | chr7.3:5823704-5823723 | None:intergenic | 35.0% | |
| AGATTTGTAAATCTCATGGG+TGG | + | chr7.3:5826249-5826268 | MS.gene22508:intron | 35.0% | |
| AGGAAATGGCTATCAATCAT+TGG | + | chr7.3:5824181-5824200 | MS.gene22508:intron | 35.0% | |
| AGGGGCAAGAATTAAAGTAA+TGG | - | chr7.3:5825526-5825545 | None:intergenic | 35.0% | |
| ATAAGTGGCTAAAAAAGGGA+GGG | + | chr7.3:5824329-5824348 | MS.gene22508:intron | 35.0% | |
| ATGGCAAAAATCAACCTTCA+TGG | + | chr7.3:5825352-5825371 | MS.gene22508:CDS | 35.0% | |
| ATGTGTAAACTATATCGCAG+AGG | - | chr7.3:5824418-5824437 | None:intergenic | 35.0% | |
| ATTCTTACTCAGGAAGAAAC+CGG | + | chr7.3:5823477-5823496 | MS.gene22508:CDS | 35.0% | |
| CAAAATAGCAGCATGTGAAA+GGG | - | chr7.3:5825032-5825051 | None:intergenic | 35.0% | |
| CCCAATAAGTGGCTAAAAAA+GGG | + | chr7.3:5824325-5824344 | MS.gene22508:intron | 35.0% | |
| CTACCTGTATGGAAACTAAA+TGG | - | chr7.3:5825003-5825022 | None:intergenic | 35.0% | |
| CTATCAATCATTGGCCATTT+GGG | + | chr7.3:5824190-5824209 | MS.gene22508:intron | 35.0% | |
| CTCAATATCAAGACTGAGAT+AGG | + | chr7.3:5824526-5824545 | MS.gene22508:intron | 35.0% | |
| CTGAAGACTTCATTGACAAT+AGG | - | chr7.3:5823708-5823727 | None:intergenic | 35.0% | |
| CTGCTTTCTTTCCATATAGA+TGG | + | chr7.3:5823208-5823227 | MS.gene22508:CDS | 35.0% | |
| CTTTCCTAGAAATGTAGGTA+TGG | - | chr7.3:5825846-5825865 | None:intergenic | 35.0% | |
| GATTTGTAAATCTCATGGGT+GGG | + | chr7.3:5826250-5826269 | MS.gene22508:intron | 35.0% | |
| GCTACATTTGTAGTCAAACT+TGG | + | chr7.3:5826315-5826334 | MS.gene22508:CDS | 35.0% | |
| GCTGTCAAATATACTAAGGA+GGG | + | chr7.3:5825615-5825634 | MS.gene22508:CDS | 35.0% | |
| GGCCAAAATCAAAATTAGAC+TGG | - | chr7.3:5824488-5824507 | None:intergenic | 35.0% | |
| GGGGCAAGAATTAAAGTAAT+GGG | - | chr7.3:5825525-5825544 | None:intergenic | 35.0% | |
| GGTTCTTTACTTAAGTCACT+AGG | - | chr7.3:5824263-5824282 | None:intergenic | 35.0% | |
| GTAAACTTGGTAAAGAGATG+TGG | - | chr7.3:5826030-5826049 | None:intergenic | 35.0% | |
| GTAAGTGCTTAAATCTAGCA+AGG | - | chr7.3:5826413-5826432 | None:intergenic | 35.0% | |
| TACTTGACAAGAAGTTCATC+TGG | - | chr7.3:5823111-5823130 | None:intergenic | 35.0% | |
| TATTCTGTCTTCTACCTTGA+TGG | - | chr7.3:5824235-5824254 | None:intergenic | 35.0% | |
| TCATCCATACCTACATTTCT+AGG | + | chr7.3:5825839-5825858 | MS.gene22508:intron | 35.0% | |
| TCATTTCTATATACGAGTCC+AGG | + | chr7.3:5825725-5825744 | MS.gene22508:CDS | 35.0% | |
| TCCCAATAAGTGGCTAAAAA+AGG | + | chr7.3:5824324-5824343 | MS.gene22508:intron | 35.0% | |
| TCTGCGATATAGTTTACACA+TGG | + | chr7.3:5824417-5824436 | MS.gene22508:intron | 35.0% | |
| TGAGTTGTTCCTTAAGAACA+AGG | + | chr7.3:5823425-5823444 | MS.gene22508:CDS | 35.0% | |
| TGCATAAGAACCCATCTATA+TGG | - | chr7.3:5823222-5823241 | None:intergenic | 35.0% | |
| TGCTGTCAAATATACTAAGG+AGG | + | chr7.3:5825614-5825633 | MS.gene22508:CDS | 35.0% | |
| TGTTCTTAAGGAACAACTCA+CGG | - | chr7.3:5823425-5823444 | None:intergenic | 35.0% | |
| TTGACAATAGGAAGGTTTGT+TGG | - | chr7.3:5823696-5823715 | None:intergenic | 35.0% | |
| TTTCATGATTCATGACTGCA+AGG | - | chr7.3:5825156-5825175 | None:intergenic | 35.0% | |
| ! | AATCAACCTTCATGGTGTTT+TGG | + | chr7.3:5825360-5825379 | MS.gene22508:CDS | 35.0% |
| ! | ACTTTCTAGCACTATCAGTA+GGG | - | chr7.3:5823914-5823933 | None:intergenic | 35.0% |
| ! | AGCATTGTCATCACTTCTTT+TGG | + | chr7.3:5825201-5825220 | MS.gene22508:CDS | 35.0% |
| ! | ATCAACCTTCATGGTGTTTT+GGG | + | chr7.3:5825361-5825380 | MS.gene22508:CDS | 35.0% |
| ! | CAGACACTTTTGAATGTTGT+GGG | + | chr7.3:5825588-5825607 | MS.gene22508:CDS | 35.0% |
| ! | TATTCTAAAGACCACTCTTG+TGG | + | chr7.3:5823554-5823573 | MS.gene22508:CDS | 35.0% |
| ! | TGGTAGCCTTGAATTAGAAA+TGG | + | chr7.3:5825333-5825352 | MS.gene22508:CDS | 35.0% |
| ! | TTACTCAATGATGACGACAT+AGG | + | chr7.3:5826429-5826448 | MS.gene22508:CDS | 35.0% |
| ! | TTTTATCCAGCATCAAGTGA+TGG | + | chr7.3:5825702-5825721 | MS.gene22508:CDS | 35.0% |
| !! | AAATTAGGAGCACTCTTGAT+AGG | + | chr7.3:5823526-5823545 | MS.gene22508:CDS | 35.0% |
| !! | ATGTTGGCGACATTTTGAAA+CGG | - | chr7.3:5824863-5824882 | None:intergenic | 35.0% |
| !! | CTATTGCTGTGAACTTGTTT+TGG | + | chr7.3:5824130-5824149 | MS.gene22508:intron | 35.0% |
| !! | GGTTTTAACACTCAACAGAT+CGG | - | chr7.3:5823403-5823422 | None:intergenic | 35.0% |
| !! | GTTTTAACACTCAACAGATC+GGG | - | chr7.3:5823402-5823421 | None:intergenic | 35.0% |
| !!! | CCCTTTTTTAGCCACTTATT+GGG | - | chr7.3:5824328-5824347 | None:intergenic | 35.0% |
| !!! | TCCCTTTTTTAGCCACTTAT+TGG | - | chr7.3:5824329-5824348 | None:intergenic | 35.0% |
| !!! | TGTGAACTTGTTTTGGAGTT+TGG | + | chr7.3:5824137-5824156 | MS.gene22508:intron | 35.0% |
| AAATGACCATCACTTGATGC+TGG | - | chr7.3:5825711-5825730 | None:intergenic | 40.0% | |
| AACCAGAATCCTTACAGGAT+TGG | + | chr7.3:5825667-5825686 | MS.gene22508:CDS | 40.0% | |
| AAGTTTACTCAGTCTCAGAG+TGG | + | chr7.3:5826042-5826061 | MS.gene22508:CDS | 40.0% | |
| AATCTGATGCAGATCTGTCT+AGG | + | chr7.3:5824648-5824667 | MS.gene22508:intron | 40.0% | |
| ACGTTGCCTTAGATTTAGCT+CGG | + | chr7.3:5825092-5825111 | MS.gene22508:CDS | 40.0% | |
| AGAAGTTCATCTGGAGGATA+AGG | - | chr7.3:5823102-5823121 | None:intergenic | 40.0% | |
| AGACTCAGAACAGAACTTAC+AGG | - | chr7.3:5824108-5824127 | None:intergenic | 40.0% | |
| AGGTTCAAACCACTTCTTGA+TGG | - | chr7.3:5823624-5823643 | None:intergenic | 40.0% | |
| ATCCTTAACCTGCACAAAGA+AGG | - | chr7.3:5825977-5825996 | None:intergenic | 40.0% | |
| ATCCTTCTTTGTGCAGGTTA+AGG | + | chr7.3:5825972-5825991 | MS.gene22508:intron | 40.0% | |
| ATGAACAAGCATAAGTGCAG+TGG | - | chr7.3:5823373-5823392 | None:intergenic | 40.0% | |
| ATGGGTTCTTATGCAGTTTG+GGG | + | chr7.3:5823227-5823246 | MS.gene22508:CDS | 40.0% | |
| CAACATTCTCACATGTCTTC+CGG | - | chr7.3:5823499-5823518 | None:intergenic | 40.0% | |
| CCAAAATAGCAGCATGTGAA+AGG | - | chr7.3:5825033-5825052 | None:intergenic | 40.0% | |
| CCATATTAGGTATGCATGTG+GGG | + | chr7.3:5824281-5824300 | MS.gene22508:intron | 40.0% | |
| CTGCACAAAGAAGGATGTTT+GGG | - | chr7.3:5825968-5825987 | None:intergenic | 40.0% | |
| CTTGATGCTGGATAAAACTC+AGG | - | chr7.3:5825699-5825718 | None:intergenic | 40.0% | |
| GAGCCACCATATATCTTCAA+TGG | - | chr7.3:5824509-5824528 | None:intergenic | 40.0% | |
| GATGGGACTTATTCTTACTC+AGG | + | chr7.3:5823467-5823486 | MS.gene22508:CDS | 40.0% | |
| GCTATCAATCATTGGCCATT+TGG | + | chr7.3:5824189-5824208 | MS.gene22508:intron | 40.0% | |
| GCTCAGGCCAATCATTAATT+TGG | - | chr7.3:5823854-5823873 | None:intergenic | 40.0% | |
| GTAGTCAAACTTGGGATTTG+TGG | + | chr7.3:5826324-5826343 | MS.gene22508:CDS | 40.0% | |
| GTTCTTAAGGAACAACTCAC+GGG | - | chr7.3:5823424-5823443 | None:intergenic | 40.0% | |
| GTTGTTCCTTAAGAACAAGG+CGG | + | chr7.3:5823428-5823447 | MS.gene22508:CDS | 40.0% | |
| TATCAAGACTGAGATAGGCT+CGG | + | chr7.3:5824531-5824550 | MS.gene22508:intron | 40.0% | |
| TGCAAAACCAGAATCCTTAC+AGG | + | chr7.3:5825662-5825681 | MS.gene22508:CDS | 40.0% | |
| TGCACAAAGAAGGATGTTTG+GGG | - | chr7.3:5825967-5825986 | None:intergenic | 40.0% | |
| TGGCCATTGAAGATATATGG+TGG | + | chr7.3:5824503-5824522 | MS.gene22508:intron | 40.0% | |
| TTGACAAGAAGTTCATCTGG+AGG | - | chr7.3:5823108-5823127 | None:intergenic | 40.0% | |
| TTTGTGCAGGTTAAGGATTC+TGG | + | chr7.3:5825979-5825998 | MS.gene22508:intron | 40.0% | |
| ! | AGATGGGTTCTTATGCAGTT+TGG | + | chr7.3:5823225-5823244 | MS.gene22508:CDS | 40.0% |
| ! | CACTTTCTAGCACTATCAGT+AGG | - | chr7.3:5823915-5823934 | None:intergenic | 40.0% |
| ! | CTACTGATAGTGCTAGAAAG+TGG | + | chr7.3:5823913-5823932 | MS.gene22508:intron | 40.0% |
| ! | GATGGGTTCTTATGCAGTTT+GGG | + | chr7.3:5823226-5823245 | MS.gene22508:CDS | 40.0% |
| ! | GCAGACACTTTTGAATGTTG+TGG | + | chr7.3:5825587-5825606 | MS.gene22508:CDS | 40.0% |
| ! | GGGGCTTTTATTGTTCTATG+TGG | + | chr7.3:5823246-5823265 | MS.gene22508:CDS | 40.0% |
| ! | TAAATGGATTCAGCATACGG+AGG | - | chr7.3:5824987-5825006 | None:intergenic | 40.0% |
| ! | TAACTTTTTGCCGAAAGCTC+AGG | - | chr7.3:5823870-5823889 | None:intergenic | 40.0% |
| !! | ACTCTGAGACTGAGTAAACT+TGG | - | chr7.3:5826043-5826062 | None:intergenic | 40.0% |
| !! | CCTTTCACATGCTGCTATTT+TGG | + | chr7.3:5825030-5825049 | MS.gene22508:CDS | 40.0% |
| !! | TAATGATTGGCCTGAGCTTT+CGG | + | chr7.3:5823857-5823876 | MS.gene22508:intron | 40.0% |
| !! | TTTGGTCTTTTCGGATTAGG+AGG | - | chr7.3:5824740-5824759 | None:intergenic | 40.0% |
| !! | TTTGTTCCATGAGTTGATCC+CGG | - | chr7.3:5825072-5825091 | None:intergenic | 40.0% |
| !!! | TTCACATGCTGCTATTTTGG+AGG | + | chr7.3:5825033-5825052 | MS.gene22508:CDS | 40.0% |
| AAAGACCACTCTTGTGGAGT+TGG | + | chr7.3:5823560-5823579 | MS.gene22508:CDS | 45.0% | |
| AAGACCACTCTTGTGGAGTT+GGG | + | chr7.3:5823561-5823580 | MS.gene22508:CDS | 45.0% | |
| ACGAGTCCAGGTTATGACTT+TGG | + | chr7.3:5825737-5825756 | MS.gene22508:intron | 45.0% | |
| AGCCACTTATTGGGATTCAG+CGG | - | chr7.3:5824319-5824338 | None:intergenic | 45.0% | |
| ATCAAGACTGAGATAGGCTC+GGG | + | chr7.3:5824532-5824551 | MS.gene22508:intron | 45.0% | |
| ATGCCATCGGTGATGAAAAG+CGG | + | chr7.3:5825559-5825578 | MS.gene22508:CDS | 45.0% | |
| ATGGCATGAGTAGGTAGATC+AGG | - | chr7.3:5825546-5825565 | None:intergenic | 45.0% | |
| CAGGTTAAGGATTCTGGATG+TGG | + | chr7.3:5825985-5826004 | MS.gene22508:intron | 45.0% | |
| CCAAACATCCTTCTTTGTGC+AGG | + | chr7.3:5825966-5825985 | MS.gene22508:intron | 45.0% | |
| CCCCACATGCATACCTAATA+TGG | - | chr7.3:5824284-5824303 | None:intergenic | 45.0% | |
| CCTGCACAAAGAAGGATGTT+TGG | - | chr7.3:5825969-5825988 | None:intergenic | 45.0% | |
| CTCCACTTCCACTATATGCT+TGG | - | chr7.3:5826389-5826408 | None:intergenic | 45.0% | |
| GAAGAGCTTGATAGGGAGAT+GGG | + | chr7.3:5823450-5823469 | MS.gene22508:CDS | 45.0% | |
| GAGATGCCAAAGTCATAACC+TGG | - | chr7.3:5825746-5825765 | None:intergenic | 45.0% | |
| GATCTACCTACTCATGCCAT+CGG | + | chr7.3:5825546-5825565 | MS.gene22508:CDS | 45.0% | |
| GATGCTGGATAAAACTCAGG+AGG | - | chr7.3:5825696-5825715 | None:intergenic | 45.0% | |
| GCTAGGATAAGACCTCTTGT+CGG | + | chr7.3:5823768-5823787 | MS.gene22508:CDS | 45.0% | |
| GGGCTCTTTCCTAGAAATGT+AGG | - | chr7.3:5825851-5825870 | None:intergenic | 45.0% | |
| TCTATCATAACCCTCTGCTC+TGG | - | chr7.3:5825241-5825260 | None:intergenic | 45.0% | |
| TGAACTGAATCCAGAGCAGA+GGG | + | chr7.3:5825228-5825247 | MS.gene22508:CDS | 45.0% | |
| TGGCATGAGTAGGTAGATCA+GGG | - | chr7.3:5825545-5825564 | None:intergenic | 45.0% | |
| TGTCGATGTTGTTGCAGATC+AGG | + | chr7.3:5823956-5823975 | MS.gene22508:intron | 45.0% | |
| TGTGGTATACGCATAGCTCT+CGG | - | chr7.3:5823735-5823754 | None:intergenic | 45.0% | |
| ! | AGAGGTCTTATCCTAGCAAG+TGG | - | chr7.3:5823765-5823784 | None:intergenic | 45.0% |
| ! | CAAGCATATAGTGGAAGTGG+AGG | + | chr7.3:5826387-5826406 | MS.gene22508:CDS | 45.0% |
| ! | TCTGCTTGCAGCTTGATGAT+CGG | - | chr7.3:5826364-5826383 | None:intergenic | 45.0% |
| !! | GGCAATAATGGTGACTTGCT+AGG | - | chr7.3:5826148-5826167 | None:intergenic | 45.0% |
| !! | GTTGGGTAGGACTTTAGGAT+TGG | + | chr7.3:5823578-5823597 | MS.gene22508:CDS | 45.0% |
| !! | TTGTTCCATGAGTTGATCCC+GGG | - | chr7.3:5825071-5825090 | None:intergenic | 45.0% |
| AAAGTGGCGAGACCATGAGT+TGG | + | chr7.3:5823929-5823948 | MS.gene22508:intron | 50.0% | |
| AAGGCTACCATCTTCCAGTC+GGG | - | chr7.3:5825323-5825342 | None:intergenic | 50.0% | |
| AAGGGCAACTGCTACCTGTA+TGG | - | chr7.3:5825014-5825033 | None:intergenic | 50.0% | |
| ACAAGGCGGAAGAGCTTGAT+AGG | + | chr7.3:5823442-5823461 | MS.gene22508:CDS | 50.0% | |
| ACCTGAAGTTGTTGCGGTTC+GGG | + | chr7.3:5823803-5823822 | MS.gene22508:CDS | 50.0% | |
| AGCACACGACACTTTAGCGA+TGG | - | chr7.3:5823337-5823356 | None:intergenic | 50.0% | |
| AGCAGAGGCCAAGCATATAG+TGG | + | chr7.3:5826378-5826397 | MS.gene22508:CDS | 50.0% | |
| ATCTCATGGGTGGGCACATA+TGG | + | chr7.3:5826259-5826278 | MS.gene22508:CDS | 50.0% | |
| CAAGGCGGAAGAGCTTGATA+GGG | + | chr7.3:5823443-5823462 | MS.gene22508:CDS | 50.0% | |
| CAAGGCTACCATCTTCCAGT+CGG | - | chr7.3:5825324-5825343 | None:intergenic | 50.0% | |
| CAATCATGTCCCCACATCTG+AGG | - | chr7.3:5824924-5824943 | None:intergenic | 50.0% | |
| CACACACTTGTCCACTTGCT+AGG | + | chr7.3:5823751-5823770 | MS.gene22508:CDS | 50.0% | |
| CACATATGGATGGAGAGCGA+GGG | + | chr7.3:5826273-5826292 | MS.gene22508:CDS | 50.0% | |
| CACCTGAAGTTGTTGCGGTT+CGG | + | chr7.3:5823802-5823821 | MS.gene22508:CDS | 50.0% | |
| CATCGACAAGCTCCAACTCA+TGG | - | chr7.3:5823944-5823963 | None:intergenic | 50.0% | |
| CCTCTCCCAAAACACCATGA+AGG | - | chr7.3:5825369-5825388 | None:intergenic | 50.0% | |
| CGCAAGTGCGATTAGAACGT+CGG | - | chr7.3:5823145-5823164 | None:intergenic | 50.0% | |
| CGCCAATCCTGTAAGGATTC+TGG | - | chr7.3:5825672-5825691 | None:intergenic | 50.0% | |
| CTAGCAAGTGGACAAGTGTG+TGG | - | chr7.3:5823753-5823772 | None:intergenic | 50.0% | |
| CTCACATGCACCTCAGATGT+GGG | + | chr7.3:5824911-5824930 | MS.gene22508:intron | 50.0% | |
| CTCTCGCCGAGCTAAATCTA+AGG | - | chr7.3:5825101-5825120 | None:intergenic | 50.0% | |
| CTGAACTGAATCCAGAGCAG+AGG | + | chr7.3:5825227-5825246 | MS.gene22508:CDS | 50.0% | |
| CTGTGGATGCCATCAAGAAG+TGG | + | chr7.3:5823612-5823631 | MS.gene22508:CDS | 50.0% | |
| GAACCACTGCTAGATCGAAC+AGG | - | chr7.3:5826069-5826088 | None:intergenic | 50.0% | |
| GATCATCAAGCTGCAAGCAG+AGG | + | chr7.3:5826363-5826382 | MS.gene22508:CDS | 50.0% | |
| GATTGGAGGAATGTGCACTG+TGG | + | chr7.3:5823595-5823614 | MS.gene22508:CDS | 50.0% | |
| GGAAGAGCTTGATAGGGAGA+TGG | + | chr7.3:5823449-5823468 | MS.gene22508:CDS | 50.0% | |
| GGCACATATCTTCCGACAAG+AGG | - | chr7.3:5823783-5823802 | None:intergenic | 50.0% | |
| GGCATGAGTAGGTAGATCAG+GGG | - | chr7.3:5825544-5825563 | None:intergenic | 50.0% | |
| GTGGAGTTGGGTAGGACTTT+AGG | + | chr7.3:5823573-5823592 | MS.gene22508:CDS | 50.0% | |
| GTGGTATACGCATAGCTCTC+GGG | - | chr7.3:5823734-5823753 | None:intergenic | 50.0% | |
| GTTCGATCTAGCAGTGGTTC+AGG | + | chr7.3:5826069-5826088 | MS.gene22508:CDS | 50.0% | |
| TCACATGCACCTCAGATGTG+GGG | + | chr7.3:5824912-5824931 | MS.gene22508:intron | 50.0% | |
| TCATCACCGATGGCATGAGT+AGG | - | chr7.3:5825555-5825574 | None:intergenic | 50.0% | |
| TCTAGCAGTGGTTCAGGTCT+TGG | + | chr7.3:5826075-5826094 | MS.gene22508:CDS | 50.0% | |
| TGTGCCACCTGAAGTTGTTG+CGG | + | chr7.3:5823797-5823816 | MS.gene22508:CDS | 50.0% | |
| ! | CTTAGATTTAGCTCGGCGAG+AGG | + | chr7.3:5825099-5825118 | MS.gene22508:CDS | 50.0% |
| ! | CTTGCAGCTTGATGATCGGA+TGG | - | chr7.3:5826360-5826379 | None:intergenic | 50.0% |
| ! | GCTCTTCCGCCTTGTTCTTA+AGG | - | chr7.3:5823437-5823456 | None:intergenic | 50.0% |
| ! | GGCCAAGCATATAGTGGAAG+TGG | + | chr7.3:5826384-5826403 | MS.gene22508:CDS | 50.0% |
| ! | GTTTGGGGTCAGTCATGAGA+TGG | - | chr7.3:5825952-5825971 | None:intergenic | 50.0% |
| ! | TGTTCTAGATCTGTCCCGAC+TGG | + | chr7.3:5825306-5825325 | MS.gene22508:CDS | 50.0% |
| !! | GGGTAGGACTTTAGGATTGG+AGG | + | chr7.3:5823581-5823600 | MS.gene22508:CDS | 50.0% |
| !!! | AAGCCGCTTTTCATCACCGA+TGG | - | chr7.3:5825565-5825584 | None:intergenic | 50.0% |
| !!! | CCTTCATGGTGTTTTGGGAG+AGG | + | chr7.3:5825366-5825385 | MS.gene22508:CDS | 50.0% |
| ACCCGAACCGCAACAACTTC+AGG | - | chr7.3:5823807-5823826 | None:intergenic | 55.0% | |
| AGGAGGTCGCCAATCCTGTA+AGG | - | chr7.3:5825679-5825698 | None:intergenic | 55.0% | |
| CATGGGTGGGCACATATGGA+TGG | + | chr7.3:5826263-5826282 | MS.gene22508:CDS | 55.0% | |
| CCACTCTTGTGGAGTTGGGT+AGG | + | chr7.3:5823565-5823584 | MS.gene22508:CDS | 55.0% | |
| CCTACCCAACTCCACAAGAG+TGG | - | chr7.3:5823568-5823587 | None:intergenic | 55.0% | |
| CCTCACATGCACCTCAGATG+TGG | + | chr7.3:5824910-5824929 | MS.gene22508:intron | 55.0% | |
| CGAACCGCAACAACTTCAGG+TGG | - | chr7.3:5823804-5823823 | None:intergenic | 55.0% | |
| GAGAGCGAGGGTCACGATAA+AGG | + | chr7.3:5826285-5826304 | MS.gene22508:CDS | 55.0% | |
| GATCTGTCCCGACTGGAAGA+TGG | + | chr7.3:5825313-5825332 | MS.gene22508:CDS | 55.0% | |
| GCACATATGGATGGAGAGCG+AGG | + | chr7.3:5826272-5826291 | MS.gene22508:CDS | 55.0% | |
| GGACCTGTTCGATCTAGCAG+TGG | + | chr7.3:5826063-5826082 | MS.gene22508:CDS | 55.0% | |
| GGCCGCTGAATCCCAATAAG+TGG | + | chr7.3:5824314-5824333 | MS.gene22508:intron | 55.0% | |
| GTGGCTAAAAAAGGGAGGGC+AGG | + | chr7.3:5824333-5824352 | MS.gene22508:intron | 55.0% | |
| ! | AGGAGGCATGTGCAGGCAAA+GGG | - | chr7.3:5824723-5824742 | None:intergenic | 55.0% |
| ! | CCACATCTGAGGTGCATGTG+AGG | - | chr7.3:5824913-5824932 | None:intergenic | 55.0% |
| ! | TAGGAGGCATGTGCAGGCAA+AGG | - | chr7.3:5824724-5824743 | None:intergenic | 55.0% |
| ! | TCGGATTAGGAGGCATGTGC+AGG | - | chr7.3:5824730-5824749 | None:intergenic | 55.0% |
| AGCTCGGCGAGAGGCTGAAA+TGG | + | chr7.3:5825108-5825127 | MS.gene22508:CDS | 60.0% | |
| TGCATGTGGGGTATGCGCTG+AGG | + | chr7.3:5824293-5824312 | MS.gene22508:intron | 60.0% | |
| GCGAGCCCGGGATCAACTCA+TGG | + | chr7.3:5825063-5825082 | MS.gene22508:CDS | 65.0% | |
| TGGAGGAGTCCATGCGAGCC+CGG | + | chr7.3:5825050-5825069 | MS.gene22508:CDS | 65.0% | |
| ! | GAGTTGATCCCGGGCTCGCA+TGG | - | chr7.3:5825062-5825081 | None:intergenic | 65.0% |
| GGAGGAGTCCATGCGAGCCC+GGG | + | chr7.3:5825051-5825070 | MS.gene22508:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5823069 | 5826485 | 5823069 | ID=MS.gene22508 |
| chr7.3 | mRNA | 5823069 | 5826485 | 5823069 | ID=MS.gene22508.t1;Parent=MS.gene22508 |
| chr7.3 | exon | 5823069 | 5823824 | 5823069 | ID=MS.gene22508.t1.exon1;Parent=MS.gene22508.t1 |
| chr7.3 | CDS | 5823069 | 5823824 | 5823069 | ID=cds.MS.gene22508.t1;Parent=MS.gene22508.t1 |
| chr7.3 | exon | 5825019 | 5825387 | 5825019 | ID=MS.gene22508.t1.exon2;Parent=MS.gene22508.t1 |
| chr7.3 | CDS | 5825019 | 5825387 | 5825019 | ID=cds.MS.gene22508.t1;Parent=MS.gene22508.t1 |
| chr7.3 | exon | 5825480 | 5825746 | 5825480 | ID=MS.gene22508.t1.exon3;Parent=MS.gene22508.t1 |
| chr7.3 | CDS | 5825480 | 5825746 | 5825480 | ID=cds.MS.gene22508.t1;Parent=MS.gene22508.t1 |
| chr7.3 | exon | 5825988 | 5826115 | 5825988 | ID=MS.gene22508.t1.exon4;Parent=MS.gene22508.t1 |
| chr7.3 | CDS | 5825988 | 5826115 | 5825988 | ID=cds.MS.gene22508.t1;Parent=MS.gene22508.t1 |
| chr7.3 | exon | 5826251 | 5826485 | 5826251 | ID=MS.gene22508.t1.exon5;Parent=MS.gene22508.t1 |
| chr7.3 | CDS | 5826251 | 5826485 | 5826251 | ID=cds.MS.gene22508.t1;Parent=MS.gene22508.t1 |
| Gene Sequence |
| Protein sequence |
