Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22598.t1 | XP_003611167.1 | 98.5 | 471 | 6 | 1 | 1 | 470 | 1 | 471 | 1.30E-267 | 931.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22598.t1 | P54873 | 76.9 | 468 | 98 | 2 | 5 | 470 | 2 | 461 | 1.6e-215 | 750.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22598.t1 | G7KER8 | 98.5 | 471 | 6 | 1 | 1 | 470 | 1 | 471 | 9.1e-268 | 931.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060077 | MS.gene22598 | 0.800777 | 1.23E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22598.t1 | MTR_5g011040 | 98.514 | 471 | 6 | 1 | 1 | 470 | 1 | 471 | 0.0 | 965 |
| MS.gene22598.t1 | MTR_5g011040 | 98.753 | 401 | 4 | 1 | 1 | 400 | 1 | 401 | 0.0 | 823 |
| MS.gene22598.t1 | MTR_6g089570 | 79.596 | 446 | 91 | 0 | 7 | 452 | 8 | 453 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22598.t1 | AT4G11820 | 76.923 | 468 | 98 | 2 | 5 | 470 | 2 | 461 | 0.0 | 774 |
| MS.gene22598.t1 | AT4G11820 | 75.604 | 414 | 91 | 2 | 59 | 470 | 1 | 406 | 0.0 | 670 |
| MS.gene22598.t1 | AT4G11820 | 75.604 | 414 | 91 | 2 | 59 | 470 | 1 | 406 | 0.0 | 670 |
Find 100 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGCTTTCAAAAGAAAT+AGG | 0.210965 | 5.2:-3870815 | None:intergenic |
| GTCTGGAACAAACAGAAATA+TGG | 0.263458 | 5.2:+3870441 | MS.gene22598:intron |
| GCAATGTTTGACAAACTAAA+TGG | 0.286875 | 5.2:-3872605 | None:intergenic |
| CTTTGTTCAATTGTGTCAAT+TGG | 0.290856 | 5.2:+3870520 | MS.gene22598:CDS |
| ATTTGCTTTCAAAAGAAATA+GGG | 0.301513 | 5.2:-3870814 | None:intergenic |
| GCTGCTATTGCTATGCTAAT+TGG | 0.307008 | 5.2:+3870782 | MS.gene22598:CDS |
| GTCTGAACTACCTTGTTATA+AGG | 0.329972 | 5.2:-3871764 | None:intergenic |
| TGATTATGATTGTAGCTCTA+AGG | 0.346847 | 5.2:+3872070 | MS.gene22598:intron |
| TGCTTTGGTATCAAAGTAGA+TGG | 0.354413 | 5.2:-3872332 | None:intergenic |
| TCATCGGATAAAGTTGTAAA+AGG | 0.369541 | 5.2:-3872119 | None:intergenic |
| AAGCAAGGACAGCAGCCTTT+TGG | 0.374475 | 5.2:+3873140 | MS.gene22598:CDS |
| CTTGCTTGTTACATAATCCT+TGG | 0.405156 | 5.2:-3873124 | None:intergenic |
| CCCTCCTAACTGCGTTCAAC+AGG | 0.405990 | 5.2:+3868783 | MS.gene22598:CDS |
| CTGCATCAAGAATGACTTGA+TGG | 0.406438 | 5.2:-3869993 | None:intergenic |
| ATAGAGGCTTTGCAACTTGT+TGG | 0.416177 | 5.2:-3872292 | None:intergenic |
| CTCATGATGGTGCGAGTAAA+GGG | 0.416361 | 5.2:+3869195 | MS.gene22598:CDS |
| TCCAGACGACCAATCTGTTT+AGG | 0.418016 | 5.2:-3869935 | None:intergenic |
| TCCTAAACAGATTGGTCGTC+TGG | 0.418362 | 5.2:+3869934 | MS.gene22598:CDS |
| TAGAGGCTTTGCAACTTGTT+GGG | 0.419718 | 5.2:-3872291 | None:intergenic |
| CATTGAAACACTGAAGCTAA+TGG | 0.420891 | 5.2:+3873086 | MS.gene22598:CDS |
| GGATGCAAATGCTGCATAGA+TGG | 0.426955 | 5.2:-3872378 | None:intergenic |
| GTTACCTGTTGAACGCAGTT+AGG | 0.430235 | 5.2:-3868787 | None:intergenic |
| ATTCTTGATGCAGATCTTTG+AGG | 0.432466 | 5.2:+3870003 | MS.gene22598:CDS |
| ATTCCAACGTTCTTTGCTGC+TGG | 0.435491 | 5.2:-3868739 | None:intergenic |
| TACATGTTACCAACTTGCTT+TGG | 0.440980 | 5.2:-3872347 | None:intergenic |
| TCAAAAGAAATAGGGGCATC+AGG | 0.453354 | 5.2:-3870806 | None:intergenic |
| CAAATTGAGGGGAAGTCATA+TGG | 0.453589 | 5.2:+3870832 | MS.gene22598:CDS |
| GCTCCTCCGGTAGGTCGAGC+AGG | 0.463854 | 5.2:-3870758 | None:intergenic |
| AATTCATGGGATGGACGTTA+TGG | 0.464557 | 5.2:+3870552 | MS.gene22598:CDS |
| AGCAATAGCAGCAGCTCCTC+CGG | 0.467184 | 5.2:-3870771 | None:intergenic |
| AGTAAAGGGAAATATACAAT+TGG | 0.468493 | 5.2:+3869209 | MS.gene22598:CDS |
| TTTGATGCAGGAAGCATTGG+AGG | 0.489358 | 5.2:+3869172 | MS.gene22598:intron |
| TTTGTTCAATTGTGTCAATT+GGG | 0.489475 | 5.2:+3870521 | MS.gene22598:CDS |
| TGTACCTTCTCATCGTATAG+AGG | 0.489750 | 5.2:-3872308 | None:intergenic |
| ATTGGGTGGAGAGCAATTCA+TGG | 0.491422 | 5.2:+3870538 | MS.gene22598:CDS |
| CTTTCTCAGGTCTATGCTGA+AGG | 0.492679 | 5.2:+3870734 | MS.gene22598:intron |
| ATGACGAGAGCTACCAAAGC+CGG | 0.493439 | 5.2:+3872138 | MS.gene22598:CDS |
| TATGGAAATACTGATATTGA+AGG | 0.498987 | 5.2:+3870459 | MS.gene22598:CDS |
| GCTCATGATGGTGCGAGTAA+AGG | 0.499177 | 5.2:+3869194 | MS.gene22598:CDS |
| GAAGGTCCTGCTCGACCTAC+CGG | 0.502083 | 5.2:+3870752 | MS.gene22598:CDS |
| TGGTCTTCAGCGACTTCTTG+AGG | 0.503836 | 5.2:+3871967 | MS.gene22598:CDS |
| TTTCAGCAACATCCATCACT+TGG | 0.507070 | 5.2:-3872628 | None:intergenic |
| AGGAAAACATTGTGGCAGTT+AGG | 0.515627 | 5.2:-3872559 | None:intergenic |
| TCGGTGAGAAAGAATGTGCC+TGG | 0.516526 | 5.2:-3873165 | None:intergenic |
| TTTGCTTTCAAAAGAAATAG+GGG | 0.519392 | 5.2:-3870813 | None:intergenic |
| GCGACTTCTTGAGGAATCCC+AGG | 0.520791 | 5.2:+3871976 | MS.gene22598:CDS |
| AGTGTTTCAATGAACTTCTG+TGG | 0.521063 | 5.2:-3873075 | None:intergenic |
| CCAAAGCCGGGATCTTGAAA+AGG | 0.524815 | 5.2:+3872151 | MS.gene22598:CDS |
| ACCTGTTGAACGCAGTTAGG+AGG | 0.526299 | 5.2:-3868784 | None:intergenic |
| GGGTATTCACTAGCAAGGTC+AGG | 0.527013 | 5.2:-3870878 | None:intergenic |
| TTTAGTTTCACGTAATTGCA+AGG | 0.530355 | 5.2:-3872579 | None:intergenic |
| TCAACTAATGCTTGCTATGG+AGG | 0.531555 | 5.2:+3870489 | MS.gene22598:CDS |
| GATTCAACTAATGCTTGCTA+TGG | 0.539495 | 5.2:+3870486 | MS.gene22598:CDS |
| ATATTATTCTCATACGGAAG+TGG | 0.541033 | 5.2:+3872536 | MS.gene22598:CDS |
| GAGATCGATCCTAAACAGAT+TGG | 0.548622 | 5.2:+3869926 | MS.gene22598:CDS |
| TGACGAGAGCTACCAAAGCC+GGG | 0.549767 | 5.2:+3872139 | MS.gene22598:CDS |
| GGGAAATATACAATTGGACT+TGG | 0.552530 | 5.2:+3869215 | MS.gene22598:CDS |
| GAGGTTACCAAAGAAAAGCT+TGG | 0.555142 | 5.2:+3872095 | MS.gene22598:CDS |
| TGATTGTAGCTCTAAGGATG+AGG | 0.558354 | 5.2:+3872076 | MS.gene22598:intron |
| GTCAAACATTGCCCAAGTGA+TGG | 0.563325 | 5.2:+3872616 | MS.gene22598:CDS |
| ACAGACAAACCGTTGACTGC+AGG | 0.565692 | 5.2:-3873246 | None:intergenic |
| CACTGAAGCTAATGGAACAT+AGG | 0.569121 | 5.2:+3873094 | MS.gene22598:CDS |
| TGCATAGAATCTACGATACA+TGG | 0.569318 | 5.2:-3873196 | None:intergenic |
| GTCAACGGTTTGTCTGTCAA+TGG | 0.569594 | 5.2:+3873252 | MS.gene22598:CDS |
| TTCAGCAACATCCATCACTT+GGG | 0.574544 | 5.2:-3872627 | None:intergenic |
| AGGGTGATATTATTCTCATA+CGG | 0.581841 | 5.2:+3872530 | MS.gene22598:CDS |
| GGAACATAGGTATGGTGCCA+AGG | 0.583616 | 5.2:+3873107 | MS.gene22598:CDS |
| AAGCTAATGGAACATAGGTA+TGG | 0.584877 | 5.2:+3873099 | MS.gene22598:CDS |
| TTCACAAACATGTTACCTCA+TGG | 0.585332 | 5.2:+3871170 | MS.gene22598:CDS |
| CCTGTTGAACGCAGTTAGGA+GGG | 0.587798 | 5.2:-3868783 | None:intergenic |
| TTTGTGCTGTAGGTTGTCGA+CGG | 0.588804 | 5.2:+3871141 | MS.gene22598:intron |
| CTACCTTGTTATAAGGAGAG+TGG | 0.592935 | 5.2:-3871757 | None:intergenic |
| GCTTTGGTAGCTCTCGTCAT+CGG | 0.595190 | 5.2:-3872135 | None:intergenic |
| AGAATGTGCCTGGAGCCAAA+AGG | 0.595474 | 5.2:-3873155 | None:intergenic |
| ACGATACATGGTATCAACTT+CGG | 0.595660 | 5.2:-3873184 | None:intergenic |
| AATTTGACTCCTGCAGTCAA+CGG | 0.595715 | 5.2:+3873237 | MS.gene22598:CDS |
| GTGGAGAGCAATTCATGGGA+TGG | 0.595820 | 5.2:+3870543 | MS.gene22598:CDS |
| CAGATTGGTCGTCTGGAAGT+CGG | 0.598190 | 5.2:+3869941 | MS.gene22598:CDS |
| TTGGGTGGAGAGCAATTCAT+GGG | 0.604306 | 5.2:+3870539 | MS.gene22598:CDS |
| ACTTTGATACCAAAGCAAGT+TGG | 0.615714 | 5.2:+3872338 | MS.gene22598:CDS |
| GTTCAATTGTGTCAATTGGG+TGG | 0.616456 | 5.2:+3870524 | MS.gene22598:CDS |
| GTTTCAATGAACTTCTGTGG+AGG | 0.619312 | 5.2:-3873072 | None:intergenic |
| GAAGCATTGGAGGCTCATGA+TGG | 0.621839 | 5.2:+3869182 | MS.gene22598:CDS |
| ATTCCACTCTCCTTATAACA+AGG | 0.625771 | 5.2:+3871754 | MS.gene22598:CDS |
| TGCAGATATGAGAAACACGA+GGG | 0.625881 | 5.2:+3871695 | MS.gene22598:intron |
| AAAGCCTCTATACGATGAGA+AGG | 0.630768 | 5.2:+3872304 | MS.gene22598:CDS |
| GGTCCTGCTCGACCTACCGG+AGG | 0.636919 | 5.2:+3870755 | MS.gene22598:CDS |
| TGACCTTGCTAGTGAATACC+CGG | 0.639253 | 5.2:+3870880 | MS.gene22598:CDS |
| TTGCATCTGCAGTTTGACAG+TGG | 0.639309 | 5.2:+3869880 | MS.gene22598:intron |
| TTACCGGGTATTCACTAGCA+AGG | 0.643611 | 5.2:-3870883 | None:intergenic |
| GCACCAGCAGCAAAGAACGT+TGG | 0.645271 | 5.2:+3868736 | MS.gene22598:CDS |
| TTGAAGATGTCATCTCAATG+AGG | 0.649419 | 5.2:+3869267 | MS.gene22598:CDS |
| CAAGGATTATGTAACAAGCA+AGG | 0.651946 | 5.2:+3873125 | MS.gene22598:CDS |
| ATAGCAGCAGCTCCTCCGGT+AGG | 0.656075 | 5.2:-3870767 | None:intergenic |
| AAAGTTGAAGTCAAGACATG+AGG | 0.659927 | 5.2:+3872649 | MS.gene22598:CDS |
| TTGCAGATATGAGAAACACG+AGG | 0.684755 | 5.2:+3871694 | MS.gene22598:intron |
| TAATTGCAAGGAAAACATTG+TGG | 0.695304 | 5.2:-3872567 | None:intergenic |
| ATTGACACAATTGAACAAAG+CGG | 0.706527 | 5.2:-3870517 | None:intergenic |
| AAATGCTGCATAGATGGACG+CGG | 0.723317 | 5.2:-3872372 | None:intergenic |
| AGCAAGTATCAAGAGCCATG+AGG | 0.727431 | 5.2:-3871185 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAATATTAATTAACTA+GGG | + | chr5.2:3871273-3871292 | MS.gene22598:intron | 10.0% |
| !! | TTGAAAAATATTAATTAACT+AGG | + | chr5.2:3871272-3871291 | MS.gene22598:intron | 10.0% |
| !!! | TATTTATTTATTTTTTTGTC+TGG | + | chr5.2:3870424-3870443 | MS.gene22598:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGTCT+TGG | + | chr5.2:3869714-3869733 | MS.gene22598:intron | 10.0% |
| !! | AAAAATATTAATTAACTAGG+GGG | + | chr5.2:3871275-3871294 | MS.gene22598:intron | 15.0% |
| !! | ATGATTGTAATTTAGTATTT+CGG | + | chr5.2:3871884-3871903 | MS.gene22598:intron | 15.0% |
| !! | CAAAAACATAATTAGATATT+TGG | - | chr5.2:3871677-3871696 | None:intergenic | 15.0% |
| !! | GAAAAATATTAATTAACTAG+GGG | + | chr5.2:3871274-3871293 | MS.gene22598:intron | 15.0% |
| !! | GTAAATATTTATTAGAAAAC+AGG | - | chr5.2:3872485-3872504 | None:intergenic | 15.0% |
| !! | TAAAAAAAAAAAAAAATCCC+AGG | - | chr5.2:3869709-3869728 | None:intergenic | 15.0% |
| !!! | ATATAATTCTAATTTTGACT+TGG | + | chr5.2:3871542-3871561 | MS.gene22598:intron | 15.0% |
| !!! | GTTTTTTCACTTTTTAATTA+AGG | + | chr5.2:3869136-3869155 | MS.gene22598:intron | 15.0% |
| !!! | TACAATGTTATTTATTTTGA+AGG | + | chr5.2:3872265-3872284 | MS.gene22598:intron | 15.0% |
| !! | AAAAGTGAAAAAACAAAAAG+AGG | - | chr5.2:3869130-3869149 | None:intergenic | 20.0% |
| !! | AATCATCAAGAAATAAGATT+AGG | - | chr5.2:3869856-3869875 | None:intergenic | 20.0% |
| !! | AATCATTCAATTAATTCTAC+TGG | + | chr5.2:3868915-3868934 | MS.gene22598:intron | 20.0% |
| !! | ACAATAAAAAATTTCACCAA+AGG | - | chr5.2:3871392-3871411 | None:intergenic | 20.0% |
| !! | AGGTTTATTATTACTGAATA+TGG | - | chr5.2:3870638-3870657 | None:intergenic | 20.0% |
| !! | AGTTTAAATACTCAAAACTA+AGG | - | chr5.2:3870127-3870146 | None:intergenic | 20.0% |
| !! | ATTGAATGATTAGGAAATAA+CGG | - | chr5.2:3868906-3868925 | None:intergenic | 20.0% |
| !! | ATTTGCTTTCAAAAGAAATA+GGG | - | chr5.2:3870817-3870836 | None:intergenic | 20.0% |
| !! | GTAGAATTAATTGAATGATT+AGG | - | chr5.2:3868915-3868934 | None:intergenic | 20.0% |
| !!! | AAAATTAAAAAGTTTTCCAG+AGG | - | chr5.2:3872020-3872039 | None:intergenic | 20.0% |
| !!! | AATTTGCTTTCAAAAGAAAT+AGG | - | chr5.2:3870818-3870837 | None:intergenic | 20.0% |
| !!! | AATTTTTTAGTTCAGAATCA+AGG | - | chr5.2:3870658-3870677 | None:intergenic | 20.0% |
| !!! | ATGTTAGTTTATTAAAATGC+TGG | + | chr5.2:3872962-3872981 | MS.gene22598:intron | 20.0% |
| !!! | TAGTTTTGAGTATTTAAACT+TGG | + | chr5.2:3870127-3870146 | MS.gene22598:intron | 20.0% |
| !!! | TTTAATTTTGTTTTTGATGC+AGG | + | chr5.2:3869160-3869179 | MS.gene22598:intron | 20.0% |
| !!! | TTTTTATTCAGTTAATGCAT+AGG | + | chr5.2:3872036-3872055 | MS.gene22598:intron | 20.0% |
| ! | AAAATTAAAACACCTTGACA+AGG | - | chr5.2:3869631-3869650 | None:intergenic | 25.0% |
| ! | AAAGTATATAGAGCATATAC+AGG | - | chr5.2:3871839-3871858 | None:intergenic | 25.0% |
| ! | AAGTATATAGAGCATATACA+GGG | - | chr5.2:3871838-3871857 | None:intergenic | 25.0% |
| ! | AATGTCAATTTAGTACCTAT+TGG | + | chr5.2:3870093-3870112 | MS.gene22598:intron | 25.0% |
| ! | AGTAAAGGGAAATATACAAT+TGG | + | chr5.2:3869209-3869228 | MS.gene22598:CDS | 25.0% |
| ! | AGTCTTAGTTAGTACAAATT+TGG | - | chr5.2:3871618-3871637 | None:intergenic | 25.0% |
| ! | ATCTAGAAATGATGAAAAGA+AGG | - | chr5.2:3868825-3868844 | None:intergenic | 25.0% |
| ! | ATGTGTGTTTAATGTTTGAT+AGG | + | chr5.2:3869785-3869804 | MS.gene22598:intron | 25.0% |
| ! | ATTGTATTAGAAAGCTATGT+AGG | - | chr5.2:3870405-3870424 | None:intergenic | 25.0% |
| ! | CTAACATATTGACATACTAT+AGG | - | chr5.2:3872949-3872968 | None:intergenic | 25.0% |
| ! | GTTAGTGTTAATAATCAGAT+TGG | + | chr5.2:3870336-3870355 | MS.gene22598:intron | 25.0% |
| ! | TAATGTCAGTCATATTAATG+TGG | + | chr5.2:3869012-3869031 | MS.gene22598:intron | 25.0% |
| ! | TATGGAAATACTGATATTGA+AGG | + | chr5.2:3870459-3870478 | MS.gene22598:CDS | 25.0% |
| ! | TGTCTGACTAAAAAATGATA+TGG | + | chr5.2:3871861-3871880 | MS.gene22598:intron | 25.0% |
| ! | TGTTAATAATCAGATTGGAT+TGG | + | chr5.2:3870341-3870360 | MS.gene22598:intron | 25.0% |
| ! | TTCACTCTCTGATATATTAT+AGG | + | chr5.2:3870308-3870327 | MS.gene22598:intron | 25.0% |
| ! | TTTGCTTTCAAAAGAAATAG+GGG | - | chr5.2:3870816-3870835 | None:intergenic | 25.0% |
| ! | TTTGTTCAATTGTGTCAATT+GGG | + | chr5.2:3870521-3870540 | MS.gene22598:CDS | 25.0% |
| !! | AAACAATCTAAATCCTTTTG+AGG | - | chr5.2:3872915-3872934 | None:intergenic | 25.0% |
| !! | ATTTACGCCTTAAAATTTTC+AGG | + | chr5.2:3872499-3872518 | MS.gene22598:intron | 25.0% |
| !! | TTACCTTCCTGAAAATTTTA+AGG | - | chr5.2:3872509-3872528 | None:intergenic | 25.0% |
| !! | TTGTCAGAACATTTTACTTT+GGG | + | chr5.2:3870935-3870954 | MS.gene22598:intron | 25.0% |
| !!! | AAAAATTTTGAAGCCTCAAA+AGG | + | chr5.2:3872899-3872918 | MS.gene22598:intron | 25.0% |
| !!! | AGGTTTCTTTCTTGTTTTTT+TGG | + | chr5.2:3869287-3869306 | MS.gene22598:intron | 25.0% |
| !!! | TGAAAAGTATTTTAACTCCT+GGG | + | chr5.2:3869689-3869708 | MS.gene22598:intron | 25.0% |
| !!! | TTCTTTTGAAAGCAAATTGA+GGG | + | chr5.2:3870820-3870839 | MS.gene22598:CDS | 25.0% |
| !!! | TTTCTTTTGAAAGCAAATTG+AGG | + | chr5.2:3870819-3870838 | MS.gene22598:CDS | 25.0% |
| !!! | TTTTGGCTGTATATTATGTT+TGG | + | chr5.2:3869304-3869323 | MS.gene22598:intron | 25.0% |
| AAAGCCAAATTAAAGTTGCA+AGG | - | chr5.2:3871018-3871037 | None:intergenic | 30.0% | |
| AAATGATGAAAAGAAGGAAG+CGG | - | chr5.2:3868819-3868838 | None:intergenic | 30.0% | |
| AACAACAATGTTATCCTTCA+TGG | - | chr5.2:3871047-3871066 | None:intergenic | 30.0% | |
| AATATTAATTAACTAGGGGG+TGG | + | chr5.2:3871278-3871297 | MS.gene22598:intron | 30.0% | |
| ACAAGTGACAACAATGAAAA+TGG | - | chr5.2:3870919-3870938 | None:intergenic | 30.0% | |
| ACTAAGGTTTAATCACCAAT+AGG | - | chr5.2:3870111-3870130 | None:intergenic | 30.0% | |
| AGGGTGATATTATTCTCATA+CGG | + | chr5.2:3872530-3872549 | MS.gene22598:CDS | 30.0% | |
| ATATTATTCTCATACGGAAG+TGG | + | chr5.2:3872536-3872555 | MS.gene22598:CDS | 30.0% | |
| ATTGACACAATTGAACAAAG+CGG | - | chr5.2:3870520-3870539 | None:intergenic | 30.0% | |
| CAAATTTGGAAAGAGGTTTA+AGG | - | chr5.2:3871604-3871623 | None:intergenic | 30.0% | |
| CATATCTGACTAGATGTTTA+TGG | - | chr5.2:3872682-3872701 | None:intergenic | 30.0% | |
| CATCACAAGAGAAAAACAAT+TGG | - | chr5.2:3870985-3871004 | None:intergenic | 30.0% | |
| CTCAGATTATTATTAGTGTC+TGG | - | chr5.2:3869385-3869404 | None:intergenic | 30.0% | |
| CTCTGATATATTATAGGATG+TGG | + | chr5.2:3870314-3870333 | MS.gene22598:intron | 30.0% | |
| CTTTGTTCAATTGTGTCAAT+TGG | + | chr5.2:3870520-3870539 | MS.gene22598:CDS | 30.0% | |
| GAACTAAAAAATTCATGTCC+TGG | + | chr5.2:3870665-3870684 | MS.gene22598:intron | 30.0% | |
| GCAATGTTTGACAAACTAAA+TGG | - | chr5.2:3872608-3872627 | None:intergenic | 30.0% | |
| GCTATATATGTCATAGATAG+TGG | - | chr5.2:3872444-3872463 | None:intergenic | 30.0% | |
| GTTAGTACAAATTTGGAAAG+AGG | - | chr5.2:3871611-3871630 | None:intergenic | 30.0% | |
| TAATTGCAAGGAAAACATTG+TGG | - | chr5.2:3872570-3872589 | None:intergenic | 30.0% | |
| TATTACTGAATATGGTCTAG+AGG | - | chr5.2:3870630-3870649 | None:intergenic | 30.0% | |
| TCATCGGATAAAGTTGTAAA+AGG | - | chr5.2:3872122-3872141 | None:intergenic | 30.0% | |
| TCATTGAGGAACATGTAAAT+TGG | + | chr5.2:3869561-3869580 | MS.gene22598:intron | 30.0% | |
| TCTAGAGGCAACATATAATT+AGG | - | chr5.2:3870615-3870634 | None:intergenic | 30.0% | |
| TCTATGACTATCACAATGTT+GGG | + | chr5.2:3870690-3870709 | MS.gene22598:intron | 30.0% | |
| TGGAGATTTCTTTGTACATT+AGG | + | chr5.2:3871488-3871507 | MS.gene22598:intron | 30.0% | |
| TTATTAGAAAACAGGCAACA+TGG | - | chr5.2:3872477-3872496 | None:intergenic | 30.0% | |
| TTCCAATTCTTAAATGAGGT+CGG | + | chr5.2:3871430-3871449 | MS.gene22598:intron | 30.0% | |
| TTCTATGACTATCACAATGT+TGG | + | chr5.2:3870689-3870708 | MS.gene22598:intron | 30.0% | |
| TTGGTAAATACAACTCATGA+TGG | + | chr5.2:3869588-3869607 | MS.gene22598:intron | 30.0% | |
| ! | AACCATTTAAAACCTTGTCA+AGG | + | chr5.2:3869616-3869635 | MS.gene22598:intron | 30.0% |
| ! | CTTGTCAGAACATTTTACTT+TGG | + | chr5.2:3870934-3870953 | MS.gene22598:intron | 30.0% |
| ! | CTTTTCATTGTCTAACCATT+TGG | + | chr5.2:3870029-3870048 | MS.gene22598:intron | 30.0% |
| ! | GAACATGTAAATTGGTGATT+TGG | + | chr5.2:3869569-3869588 | MS.gene22598:intron | 30.0% |
| ! | TGAGGCTTCAAAATTTTTGT+AGG | - | chr5.2:3872897-3872916 | None:intergenic | 30.0% |
| ! | TGATTATGATTGTAGCTCTA+AGG | + | chr5.2:3872070-3872089 | MS.gene22598:intron | 30.0% |
| ! | TTAAAAAGTTTTCCAGAGGA+TGG | - | chr5.2:3872016-3872035 | None:intergenic | 30.0% |
| ! | TTTAGTTTCACGTAATTGCA+AGG | - | chr5.2:3872582-3872601 | None:intergenic | 30.0% |
| !! | AAAATTTTCAGGAAGGTAAG+AGG | + | chr5.2:3872510-3872529 | MS.gene22598:intron | 30.0% |
| !! | AAATGGATTGAAAAGCTTAC+CGG | - | chr5.2:3870902-3870921 | None:intergenic | 30.0% |
| !! | AAATTTTCAGGAAGGTAAGA+GGG | + | chr5.2:3872511-3872530 | MS.gene22598:intron | 30.0% |
| !! | GATTTGATTTGTCATCATTG+AGG | + | chr5.2:3869547-3869566 | MS.gene22598:intron | 30.0% |
| !! | TCTTTTGAAAGCAAATTGAG+GGG | + | chr5.2:3870821-3870840 | MS.gene22598:CDS | 30.0% |
| !!! | AGCTATTTTTGTTGTGAAGA+AGG | - | chr5.2:3872403-3872422 | None:intergenic | 30.0% |
| !!! | GCTATTTTTGTTGTGAAGAA+GGG | - | chr5.2:3872402-3872421 | None:intergenic | 30.0% |
| !!! | GTGAAAAGTATTTTAACTCC+TGG | + | chr5.2:3869688-3869707 | MS.gene22598:intron | 30.0% |
| AAAAAATTTCACCAAAGGCC+AGG | - | chr5.2:3871387-3871406 | None:intergenic | 35.0% | |
| AAACGAACAGAGATACAGAT+TGG | + | chr5.2:3872833-3872852 | MS.gene22598:intron | 35.0% | |
| AAAGTTGAAGTCAAGACATG+AGG | + | chr5.2:3872649-3872668 | MS.gene22598:CDS | 35.0% | |
| AAGCTAATGGAACATAGGTA+TGG | + | chr5.2:3873099-3873118 | MS.gene22598:CDS | 35.0% | |
| AATGTGTCCTTTGGTGAAAA+TGG | + | chr5.2:3871468-3871487 | MS.gene22598:intron | 35.0% | |
| ACATTAAACACACATACAGC+AGG | - | chr5.2:3869780-3869799 | None:intergenic | 35.0% | |
| ACGATACATGGTATCAACTT+CGG | - | chr5.2:3873187-3873206 | None:intergenic | 35.0% | |
| ACTTTGATACCAAAGCAAGT+TGG | + | chr5.2:3872338-3872357 | MS.gene22598:CDS | 35.0% | |
| AGTGTTTCAATGAACTTCTG+TGG | - | chr5.2:3873078-3873097 | None:intergenic | 35.0% | |
| ATGACGTAGAAGTAAAGAAC+AGG | - | chr5.2:3871074-3871093 | None:intergenic | 35.0% | |
| ATGGATAAATGATGAGAACC+TGG | - | chr5.2:3871997-3872016 | None:intergenic | 35.0% | |
| ATTCCACTCTCCTTATAACA+AGG | + | chr5.2:3871754-3871773 | MS.gene22598:CDS | 35.0% | |
| ATTCTTGATGCAGATCTTTG+AGG | + | chr5.2:3870003-3870022 | MS.gene22598:CDS | 35.0% | |
| CAAGGATTATGTAACAAGCA+AGG | + | chr5.2:3873125-3873144 | MS.gene22598:CDS | 35.0% | |
| CAATCAATGCTTACTTTCTC+AGG | + | chr5.2:3870721-3870740 | MS.gene22598:intron | 35.0% | |
| CATTGAAACACTGAAGCTAA+TGG | + | chr5.2:3873086-3873105 | MS.gene22598:CDS | 35.0% | |
| CGAGTTCCAATTCTTAAATG+AGG | + | chr5.2:3871426-3871445 | MS.gene22598:intron | 35.0% | |
| CTATGACTATCACAATGTTG+GGG | + | chr5.2:3870691-3870710 | MS.gene22598:intron | 35.0% | |
| CTTTACATGAAAACAGTCAC+TGG | - | chr5.2:3870274-3870293 | None:intergenic | 35.0% | |
| GAATGATTAGGAAATAACGG+TGG | - | chr5.2:3868903-3868922 | None:intergenic | 35.0% | |
| GCATCCTTGCAACTTTAATT+TGG | + | chr5.2:3871011-3871030 | MS.gene22598:intron | 35.0% | |
| GGGAAATATACAATTGGACT+TGG | + | chr5.2:3869215-3869234 | MS.gene22598:CDS | 35.0% | |
| TAAGCATGTGACATGAGATT+TGG | + | chr5.2:3869482-3869501 | MS.gene22598:intron | 35.0% | |
| TACTACTAAGGTTATGGCAT+CGG | - | chr5.2:3870247-3870266 | None:intergenic | 35.0% | |
| TATTATTAGTGTCTGGTGTC+TGG | - | chr5.2:3869378-3869397 | None:intergenic | 35.0% | |
| TCACAACAAAAATAGCTCAC+TGG | + | chr5.2:3872406-3872425 | MS.gene22598:CDS | 35.0% | |
| TGCATAGAATCTACGATACA+TGG | - | chr5.2:3873199-3873218 | None:intergenic | 35.0% | |
| TGCTTTGGTATCAAAGTAGA+TGG | - | chr5.2:3872335-3872354 | None:intergenic | 35.0% | |
| TGGATAAATGATGAGAACCT+GGG | - | chr5.2:3871996-3872015 | None:intergenic | 35.0% | |
| TTCACAAACATGTTACCTCA+TGG | + | chr5.2:3871170-3871189 | MS.gene22598:CDS | 35.0% | |
| TTCCGACCTCATTTAAGAAT+TGG | - | chr5.2:3871435-3871454 | None:intergenic | 35.0% | |
| TTGAAGATGTCATCTCAATG+AGG | + | chr5.2:3869267-3869286 | MS.gene22598:CDS | 35.0% | |
| TTGTGATAGTCATAGAATCC+AGG | - | chr5.2:3870686-3870705 | None:intergenic | 35.0% | |
| ! | AAAAGGTCCAAGCTTTTCTT+TGG | - | chr5.2:3872105-3872124 | None:intergenic | 35.0% |
| ! | ATTTTCACCAAAGGACACAT+TGG | - | chr5.2:3871469-3871488 | None:intergenic | 35.0% |
| ! | CTTGCTTGTTACATAATCCT+TGG | - | chr5.2:3873127-3873146 | None:intergenic | 35.0% |
| ! | GAAATCTCCATTTTCACCAA+AGG | - | chr5.2:3871478-3871497 | None:intergenic | 35.0% |
| ! | GATTCAACTAATGCTTGCTA+TGG | + | chr5.2:3870486-3870505 | MS.gene22598:CDS | 35.0% |
| ! | GCAAAAAAGTTTTGCTCGTT+TGG | + | chr5.2:3871947-3871966 | MS.gene22598:CDS | 35.0% |
| ! | GTCTGAACTACCTTGTTATA+AGG | - | chr5.2:3871767-3871786 | None:intergenic | 35.0% |
| ! | GTCTGGAACAAACAGAAATA+TGG | + | chr5.2:3870441-3870460 | MS.gene22598:intron | 35.0% |
| ! | TACATGTTACCAACTTGCTT+TGG | - | chr5.2:3872350-3872369 | None:intergenic | 35.0% |
| ! | TTTGTAGGAGCACAACTAAA+AGG | - | chr5.2:3872882-3872901 | None:intergenic | 35.0% |
| !! | AATGGATTGAAAAGCTTACC+GGG | - | chr5.2:3870901-3870920 | None:intergenic | 35.0% |
| !! | ACAGGGAGCATTATTATCAT+TGG | - | chr5.2:3871821-3871840 | None:intergenic | 35.0% |
| !! | ACGCCTTAAAATTTTCAGGA+AGG | + | chr5.2:3872503-3872522 | MS.gene22598:intron | 35.0% |
| !! | CGTGATTAGCTTAATGAAGA+TGG | - | chr5.2:3868860-3868879 | None:intergenic | 35.0% |
| !!! | CACCTTGACAAGGTTTTAAA+TGG | - | chr5.2:3869621-3869640 | None:intergenic | 35.0% |
| AAAGCCTCTATACGATGAGA+AGG | + | chr5.2:3872304-3872323 | MS.gene22598:CDS | 40.0% | |
| AATTCATGGGATGGACGTTA+TGG | + | chr5.2:3870552-3870571 | MS.gene22598:CDS | 40.0% | |
| AATTTGACTCCTGCAGTCAA+CGG | + | chr5.2:3873237-3873256 | MS.gene22598:CDS | 40.0% | |
| ACTACTAAGGTTATGGCATC+GGG | - | chr5.2:3870246-3870265 | None:intergenic | 40.0% | |
| AGGAAAACATTGTGGCAGTT+AGG | - | chr5.2:3872562-3872581 | None:intergenic | 40.0% | |
| ATAGAGGCTTTGCAACTTGT+TGG | - | chr5.2:3872295-3872314 | None:intergenic | 40.0% | |
| CAAATTGAGGGGAAGTCATA+TGG | + | chr5.2:3870832-3870851 | MS.gene22598:CDS | 40.0% | |
| CACTGAAGCTAATGGAACAT+AGG | + | chr5.2:3873094-3873113 | MS.gene22598:CDS | 40.0% | |
| CCTACAGCACAAAAATCATG+TGG | - | chr5.2:3871134-3871153 | None:intergenic | 40.0% | |
| CTCATCATTTATCCATCCTC+TGG | + | chr5.2:3872001-3872020 | MS.gene22598:intron | 40.0% | |
| CTGCATCAAGAATGACTTGA+TGG | - | chr5.2:3869996-3870015 | None:intergenic | 40.0% | |
| GACTTGGCTCAAATCAACAA+TGG | + | chr5.2:3871558-3871577 | MS.gene22598:intron | 40.0% | |
| GAGATCGATCCTAAACAGAT+TGG | + | chr5.2:3869926-3869945 | MS.gene22598:CDS | 40.0% | |
| GAGGTTACCAAAGAAAAGCT+TGG | + | chr5.2:3872095-3872114 | MS.gene22598:CDS | 40.0% | |
| GCGAGAATCACATATCCAAA+TGG | - | chr5.2:3870047-3870066 | None:intergenic | 40.0% | |
| GCTGCTATTGCTATGCTAAT+TGG | + | chr5.2:3870782-3870801 | MS.gene22598:CDS | 40.0% | |
| GTATCCTGAAATGCTACATG+TGG | - | chr5.2:3871097-3871116 | None:intergenic | 40.0% | |
| GTTCAATTGTGTCAATTGGG+TGG | + | chr5.2:3870524-3870543 | MS.gene22598:CDS | 40.0% | |
| GTTTCAATGAACTTCTGTGG+AGG | - | chr5.2:3873075-3873094 | None:intergenic | 40.0% | |
| TCATCCACATGTAGCATTTC+AGG | + | chr5.2:3871090-3871109 | MS.gene22598:intron | 40.0% | |
| TCATGTGGATTTAGTGCACT+TGG | - | chr5.2:3871119-3871138 | None:intergenic | 40.0% | |
| TCTCATGTCACATGCTTATC+CGG | - | chr5.2:3869480-3869499 | None:intergenic | 40.0% | |
| TCTTAAATGAGGTCGGAAAC+CGG | + | chr5.2:3871437-3871456 | MS.gene22598:intron | 40.0% | |
| TGCAGATATGAGAAACACGA+GGG | + | chr5.2:3871695-3871714 | MS.gene22598:intron | 40.0% | |
| TGTACCTTCTCATCGTATAG+AGG | - | chr5.2:3872311-3872330 | None:intergenic | 40.0% | |
| TTCAGCAACATCCATCACTT+GGG | - | chr5.2:3872630-3872649 | None:intergenic | 40.0% | |
| TTGCAGATATGAGAAACACG+AGG | + | chr5.2:3871694-3871713 | MS.gene22598:intron | 40.0% | |
| TTTCAGCAACATCCATCACT+TGG | - | chr5.2:3872631-3872650 | None:intergenic | 40.0% | |
| ! | CCACATGATTTTTGTGCTGT+AGG | + | chr5.2:3871131-3871150 | MS.gene22598:intron | 40.0% |
| ! | CTACCTTGTTATAAGGAGAG+TGG | - | chr5.2:3871760-3871779 | None:intergenic | 40.0% |
| ! | TAGAGGCTTTGCAACTTGTT+GGG | - | chr5.2:3872294-3872313 | None:intergenic | 40.0% |
| !! | CACATACCTTTTCAAGATCC+CGG | - | chr5.2:3872160-3872179 | None:intergenic | 40.0% |
| !! | GTTTTTGATGCAGGAAGCAT+TGG | + | chr5.2:3869169-3869188 | MS.gene22598:intron | 40.0% |
| !! | TCAAAAGAAATAGGGGCATC+AGG | - | chr5.2:3870809-3870828 | None:intergenic | 40.0% |
| !! | TCAACTAATGCTTGCTATGG+AGG | + | chr5.2:3870489-3870508 | MS.gene22598:CDS | 40.0% |
| !! | TGATTGTAGCTCTAAGGATG+AGG | + | chr5.2:3872076-3872095 | MS.gene22598:intron | 40.0% |
| !! | TTGGCTTTGATATGCCATGA+AGG | + | chr5.2:3871030-3871049 | MS.gene22598:intron | 40.0% |
| AAATGCTGCATAGATGGACG+CGG | - | chr5.2:3872375-3872394 | None:intergenic | 45.0% | |
| AGCAAGTATCAAGAGCCATG+AGG | - | chr5.2:3871188-3871207 | None:intergenic | 45.0% | |
| ATTCCAACGTTCTTTGCTGC+TGG | - | chr5.2:3868742-3868761 | None:intergenic | 45.0% | |
| ATTGGGTGGAGAGCAATTCA+TGG | + | chr5.2:3870538-3870557 | MS.gene22598:CDS | 45.0% | |
| CTTTCTCAGGTCTATGCTGA+AGG | + | chr5.2:3870734-3870753 | MS.gene22598:intron | 45.0% | |
| GGATGCAAATGCTGCATAGA+TGG | - | chr5.2:3872381-3872400 | None:intergenic | 45.0% | |
| GGTCGCTACTACTAAGGTTA+TGG | - | chr5.2:3870253-3870272 | None:intergenic | 45.0% | |
| GTCAAACATTGCCCAAGTGA+TGG | + | chr5.2:3872616-3872635 | MS.gene22598:CDS | 45.0% | |
| GTCAACGGTTTGTCTGTCAA+TGG | + | chr5.2:3873252-3873271 | MS.gene22598:CDS | 45.0% | |
| GTGATTCTCGCTGTCAATGT+AGG | + | chr5.2:3870056-3870075 | MS.gene22598:intron | 45.0% | |
| GTTACCTGTTGAACGCAGTT+AGG | - | chr5.2:3868790-3868809 | None:intergenic | 45.0% | |
| TCCAGACGACCAATCTGTTT+AGG | - | chr5.2:3869938-3869957 | None:intergenic | 45.0% | |
| TGACCTTGCTAGTGAATACC+CGG | + | chr5.2:3870880-3870899 | MS.gene22598:CDS | 45.0% | |
| TTACCGGGTATTCACTAGCA+AGG | - | chr5.2:3870886-3870905 | None:intergenic | 45.0% | |
| TTGCATCTGCAGTTTGACAG+TGG | + | chr5.2:3869880-3869899 | MS.gene22598:intron | 45.0% | |
| TTGGGTGGAGAGCAATTCAT+GGG | + | chr5.2:3870539-3870558 | MS.gene22598:CDS | 45.0% | |
| TTTGTGCTGTAGGTTGTCGA+CGG | + | chr5.2:3871141-3871160 | MS.gene22598:intron | 45.0% | |
| ! | CTCATGATGGTGCGAGTAAA+GGG | + | chr5.2:3869195-3869214 | MS.gene22598:CDS | 45.0% |
| ! | TCCTAAACAGATTGGTCGTC+TGG | + | chr5.2:3869934-3869953 | MS.gene22598:CDS | 45.0% |
| !! | TTTGATGCAGGAAGCATTGG+AGG | + | chr5.2:3869172-3869191 | MS.gene22598:intron | 45.0% |
| !!! | TTTTTTTTTAATTAGAAAAA+AGG | + | chr5.2:3869055-3869074 | MS.gene22598:intron | 5.0% |
| ACCTGTTGAACGCAGTTAGG+AGG | - | chr5.2:3868787-3868806 | None:intergenic | 50.0% | |
| AGAATGTGCCTGGAGCCAAA+AGG | - | chr5.2:3873158-3873177 | None:intergenic | 50.0% | |
| ATGACGAGAGCTACCAAAGC+CGG | + | chr5.2:3872138-3872157 | MS.gene22598:CDS | 50.0% | |
| CACTGAGACGTGTCAAACAC+CGG | + | chr5.2:3869458-3869477 | MS.gene22598:intron | 50.0% | |
| CCAAAGCCGGGATCTTGAAA+AGG | + | chr5.2:3872151-3872170 | MS.gene22598:CDS | 50.0% | |
| CCTGTTGAACGCAGTTAGGA+GGG | - | chr5.2:3868786-3868805 | None:intergenic | 50.0% | |
| GGGTATTCACTAGCAAGGTC+AGG | - | chr5.2:3870881-3870900 | None:intergenic | 50.0% | |
| GTCACTGGTCGCTACTACTA+AGG | - | chr5.2:3870259-3870278 | None:intergenic | 50.0% | |
| GTGGAGAGCAATTCATGGGA+TGG | + | chr5.2:3870543-3870562 | MS.gene22598:CDS | 50.0% | |
| TCACCAAAGGACACATTGGC+AGG | - | chr5.2:3871465-3871484 | None:intergenic | 50.0% | |
| TCGGTGAGAAAGAATGTGCC+TGG | - | chr5.2:3873168-3873187 | None:intergenic | 50.0% | |
| TGGTCTTCAGCGACTTCTTG+AGG | + | chr5.2:3871967-3871986 | MS.gene22598:CDS | 50.0% | |
| ! | AAGCAAGGACAGCAGCCTTT+TGG | + | chr5.2:3873140-3873159 | MS.gene22598:CDS | 50.0% |
| ! | ACAGACAAACCGTTGACTGC+AGG | - | chr5.2:3873249-3873268 | None:intergenic | 50.0% |
| ! | CAGATTGGTCGTCTGGAAGT+CGG | + | chr5.2:3869941-3869960 | MS.gene22598:CDS | 50.0% |
| ! | GATGCAAGTTGAGTCTGACC+TGG | + | chr5.2:3871361-3871380 | MS.gene22598:intron | 50.0% |
| ! | GCTCATGATGGTGCGAGTAA+AGG | + | chr5.2:3869194-3869213 | MS.gene22598:CDS | 50.0% |
| ! | GCTTTGGTAGCTCTCGTCAT+CGG | - | chr5.2:3872138-3872157 | None:intergenic | 50.0% |
| ! | GGAACATAGGTATGGTGCCA+AGG | + | chr5.2:3873107-3873126 | MS.gene22598:CDS | 50.0% |
| !! | CCTTTTCAAGATCCCGGCTT+TGG | - | chr5.2:3872154-3872173 | None:intergenic | 50.0% |
| !! | GAAGCATTGGAGGCTCATGA+TGG | + | chr5.2:3869182-3869201 | MS.gene22598:CDS | 50.0% |
| AAGGACACATTGGCAGGCAC+CGG | - | chr5.2:3871459-3871478 | None:intergenic | 55.0% | |
| AAGTTGAGTCTGACCTGGCC+TGG | + | chr5.2:3871366-3871385 | MS.gene22598:intron | 55.0% | |
| AGCAATAGCAGCAGCTCCTC+CGG | - | chr5.2:3870774-3870793 | None:intergenic | 55.0% | |
| ATTTCACCAAAGGCCAGGCC+AGG | - | chr5.2:3871382-3871401 | None:intergenic | 55.0% | |
| CACATGTGTCAGTGTCGCGT+TGG | + | chr5.2:3869428-3869447 | MS.gene22598:intron | 55.0% | |
| CCCTCCTAACTGCGTTCAAC+AGG | + | chr5.2:3868783-3868802 | MS.gene22598:CDS | 55.0% | |
| GCACCAGCAGCAAAGAACGT+TGG | + | chr5.2:3868736-3868755 | MS.gene22598:CDS | 55.0% | |
| GCGACTTCTTGAGGAATCCC+AGG | + | chr5.2:3871976-3871995 | MS.gene22598:CDS | 55.0% | |
| GTGCCTGCCAATGTGTCCTT+TGG | + | chr5.2:3871459-3871478 | MS.gene22598:intron | 55.0% | |
| TGACGAGAGCTACCAAAGCC+GGG | + | chr5.2:3872139-3872158 | MS.gene22598:CDS | 55.0% | |
| ! | TGTCAGTGTCGCGTTGGTGT+CGG | + | chr5.2:3869434-3869453 | MS.gene22598:intron | 55.0% |
| ATAGCAGCAGCTCCTCCGGT+AGG | - | chr5.2:3870770-3870789 | None:intergenic | 60.0% | |
| GAAGGTCCTGCTCGACCTAC+CGG | + | chr5.2:3870752-3870771 | MS.gene22598:CDS | 60.0% | |
| ! | GTCAGTGTCGCGTTGGTGTC+GGG | + | chr5.2:3869435-3869454 | MS.gene22598:intron | 60.0% |
| !!! | GACAGCAGCCTTTTGGCTCC+AGG | + | chr5.2:3873147-3873166 | MS.gene22598:CDS | 60.0% |
| ! | GTCTGACCTGGCCTGGCCTT+TGG | + | chr5.2:3871373-3871392 | MS.gene22598:intron | 65.0% |
| GCTCCTCCGGTAGGTCGAGC+AGG | - | chr5.2:3870761-3870780 | None:intergenic | 70.0% | |
| GGTCCTGCTCGACCTACCGG+AGG | + | chr5.2:3870755-3870774 | MS.gene22598:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 3868733 | 3873281 | 3868733 | ID=MS.gene22598 |
| chr5.2 | mRNA | 3868733 | 3873281 | 3868733 | ID=MS.gene22598.t1;Parent=MS.gene22598 |
| chr5.2 | exon | 3868733 | 3868804 | 3868733 | ID=MS.gene22598.t1.exon1;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3868733 | 3868804 | 3868733 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3869182 | 3869288 | 3869182 | ID=MS.gene22598.t1.exon2;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3869182 | 3869288 | 3869182 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3869892 | 3870024 | 3869892 | ID=MS.gene22598.t1.exon3;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3869892 | 3870024 | 3869892 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3870456 | 3870599 | 3870456 | ID=MS.gene22598.t1.exon4;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3870456 | 3870599 | 3870456 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3870743 | 3870901 | 3870743 | ID=MS.gene22598.t1.exon5;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3870743 | 3870901 | 3870743 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3871153 | 3871226 | 3871153 | ID=MS.gene22598.t1.exon6;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3871153 | 3871226 | 3871153 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3871700 | 3871775 | 3871700 | ID=MS.gene22598.t1.exon7;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3871700 | 3871775 | 3871700 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3871942 | 3871997 | 3871942 | ID=MS.gene22598.t1.exon8;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3871942 | 3871997 | 3871942 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3872085 | 3872172 | 3872085 | ID=MS.gene22598.t1.exon9;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3872085 | 3872172 | 3872085 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3872287 | 3872427 | 3872287 | ID=MS.gene22598.t1.exon10;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3872287 | 3872427 | 3872287 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3872521 | 3872670 | 3872521 | ID=MS.gene22598.t1.exon11;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3872521 | 3872670 | 3872521 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| chr5.2 | exon | 3873069 | 3873281 | 3873069 | ID=MS.gene22598.t1.exon12;Parent=MS.gene22598.t1 |
| chr5.2 | CDS | 3873069 | 3873281 | 3873069 | ID=cds.MS.gene22598.t1;Parent=MS.gene22598.t1 |
| Gene Sequence |
| Protein sequence |
