Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060077.t1 | PNX93014.1 | 94.8 | 307 | 16 | 0 | 1 | 307 | 106 | 412 | 2.30E-153 | 551.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060077.t1 | A0A2K3MQK8 | 94.8 | 307 | 16 | 0 | 1 | 307 | 106 | 412 | 1.7e-153 | 551.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050817 | MS.gene060077 | 0.829537 | 4.87E-55 | -1.69E-46 |
| MS.gene050818 | MS.gene060077 | 0.813536 | 2.44E-51 | -1.69E-46 |
| MS.gene050894 | MS.gene060077 | 0.80527 | 1.45E-49 | -1.69E-46 |
| MS.gene052678 | MS.gene060077 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene054585 | MS.gene060077 | 0.825383 | 4.83E-54 | -1.69E-46 |
| MS.gene058550 | MS.gene060077 | 0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene060076 | MS.gene060077 | 0.881308 | 2.67E-70 | -1.69E-46 |
| MS.gene060077 | MS.gene061683 | 0.804879 | 1.75E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene063145 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene073161 | 0.826015 | 3.42E-54 | -1.69E-46 |
| MS.gene060077 | MS.gene09078 | 0.830144 | 3.47E-55 | -1.69E-46 |
| MS.gene060077 | MS.gene20349 | 0.830038 | 3.68E-55 | -1.69E-46 |
| MS.gene060077 | MS.gene22598 | 0.800777 | 1.23E-48 | -1.69E-46 |
| MS.gene060077 | MS.gene26474 | 0.826905 | 2.10E-54 | -1.69E-46 |
| MS.gene060077 | MS.gene29353 | 0.825365 | 4.88E-54 | -1.69E-46 |
| MS.gene060077 | MS.gene30247 | 0.81772 | 2.85E-52 | -1.69E-46 |
| MS.gene060077 | MS.gene34720 | 0.838591 | 2.63E-57 | -1.69E-46 |
| MS.gene060077 | MS.gene38302 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene060077 | MS.gene43825 | 0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene47799 | 0.802574 | 5.26E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene53779 | 0.964498 | 2.11E-123 | -1.69E-46 |
| MS.gene060077 | MS.gene53975 | 0.810096 | 1.37E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene62680 | 0.80718 | 5.73E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene67231 | 0.8269 | 2.10E-54 | -1.69E-46 |
| MS.gene060077 | MS.gene68200 | 0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene68793 | 0.804461 | 2.14E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene71941 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene76513 | 0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene78187 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene83234 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene90819 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene94828 | 0.839274 | 1.75E-57 | -1.69E-46 |
| MS.gene060077 | MS.gene97191 | 0.801844 | 7.43E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060077.t1 | MTR_7g029015 | 98.046 | 307 | 6 | 0 | 1 | 307 | 113 | 419 | 0.0 | 605 |
| MS.gene060077.t1 | MTR_3g099150 | 50.318 | 314 | 115 | 3 | 1 | 307 | 113 | 392 | 1.76e-97 | 298 |
| MS.gene060077.t1 | MTR_2g450710 | 33.444 | 302 | 191 | 4 | 7 | 307 | 116 | 408 | 5.38e-53 | 182 |
| MS.gene060077.t1 | MTR_4g116210 | 34.628 | 309 | 183 | 6 | 7 | 307 | 117 | 414 | 2.00e-50 | 176 |
| MS.gene060077.t1 | MTR_1g111550 | 35.535 | 318 | 158 | 11 | 1 | 306 | 123 | 405 | 7.95e-46 | 163 |
| MS.gene060077.t1 | MTR_2g100400 | 32.903 | 310 | 164 | 9 | 1 | 307 | 124 | 392 | 6.23e-45 | 160 |
| MS.gene060077.t1 | MTR_1g111510 | 34.202 | 307 | 172 | 7 | 1 | 303 | 124 | 404 | 6.36e-45 | 161 |
| MS.gene060077.t1 | MTR_7g102880 | 33.651 | 315 | 178 | 5 | 1 | 306 | 127 | 419 | 2.04e-44 | 160 |
| MS.gene060077.t1 | MTR_1g111540 | 33.550 | 307 | 174 | 7 | 1 | 303 | 124 | 404 | 8.82e-44 | 158 |
| MS.gene060077.t1 | MTR_1g111530 | 32.051 | 312 | 172 | 6 | 1 | 303 | 120 | 400 | 4.68e-43 | 155 |
| MS.gene060077.t1 | MTR_1g050550 | 32.808 | 317 | 178 | 7 | 1 | 306 | 122 | 414 | 3.92e-41 | 150 |
| MS.gene060077.t1 | MTR_1g059080 | 34.076 | 314 | 169 | 8 | 1 | 306 | 122 | 405 | 7.96e-41 | 149 |
| MS.gene060077.t1 | MTR_5g090570 | 33.987 | 306 | 161 | 8 | 1 | 303 | 115 | 382 | 2.47e-40 | 147 |
| MS.gene060077.t1 | MTR_5g022380 | 31.935 | 310 | 170 | 6 | 1 | 307 | 1 | 272 | 8.88e-40 | 144 |
| MS.gene060077.t1 | MTR_5g022380 | 31.935 | 310 | 170 | 6 | 1 | 307 | 111 | 382 | 5.77e-39 | 144 |
| MS.gene060077.t1 | MTR_4g073690 | 29.653 | 317 | 178 | 4 | 1 | 307 | 113 | 394 | 8.38e-39 | 141 |
| MS.gene060077.t1 | MTR_4g073690 | 29.653 | 317 | 178 | 4 | 1 | 307 | 113 | 394 | 1.23e-37 | 140 |
| MS.gene060077.t1 | MTR_2g104250 | 34.031 | 191 | 103 | 3 | 119 | 303 | 4 | 177 | 7.72e-27 | 107 |
| MS.gene060077.t1 | MTR_7g083660 | 23.077 | 299 | 195 | 9 | 14 | 296 | 117 | 396 | 6.33e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060077.t1 | AT3G01930 | 69.937 | 316 | 86 | 3 | 1 | 307 | 114 | 429 | 1.01e-150 | 430 |
| MS.gene060077.t1 | AT3G01930 | 69.937 | 316 | 86 | 3 | 1 | 307 | 1 | 316 | 2.59e-150 | 430 |
| MS.gene060077.t1 | AT3G01930 | 69.937 | 316 | 86 | 3 | 1 | 307 | 114 | 429 | 8.74e-149 | 430 |
| MS.gene060077.t1 | AT5G14120 | 71.704 | 311 | 84 | 3 | 1 | 307 | 114 | 424 | 1.35e-147 | 427 |
| MS.gene060077.t1 | AT5G50520 | 45.779 | 308 | 126 | 4 | 3 | 307 | 117 | 386 | 7.58e-85 | 265 |
| MS.gene060077.t1 | AT5G50630 | 45.779 | 308 | 126 | 4 | 3 | 307 | 117 | 386 | 7.58e-85 | 265 |
| MS.gene060077.t1 | AT2G39210 | 34.967 | 306 | 177 | 5 | 1 | 304 | 119 | 404 | 1.12e-49 | 174 |
| MS.gene060077.t1 | AT2G28120 | 34.395 | 314 | 167 | 9 | 1 | 306 | 115 | 397 | 3.36e-49 | 172 |
| MS.gene060077.t1 | AT1G80530 | 32.895 | 304 | 188 | 4 | 7 | 307 | 117 | 407 | 2.41e-47 | 167 |
| MS.gene060077.t1 | AT2G16660 | 32.903 | 310 | 174 | 6 | 1 | 307 | 112 | 390 | 2.28e-45 | 158 |
| MS.gene060077.t1 | AT4G34950 | 31.646 | 316 | 189 | 6 | 1 | 307 | 114 | 411 | 1.00e-44 | 160 |
| MS.gene060077.t1 | AT2G16660 | 32.692 | 312 | 172 | 7 | 1 | 307 | 112 | 390 | 5.44e-44 | 157 |
| MS.gene060077.t1 | AT1G74780 | 32.573 | 307 | 158 | 7 | 1 | 303 | 121 | 382 | 8.97e-38 | 140 |
| MS.gene060077.t1 | AT2G34350 | 31.148 | 305 | 162 | 8 | 1 | 303 | 117 | 375 | 9.30e-34 | 129 |
| MS.gene060077.t1 | AT2G34350 | 31.148 | 305 | 162 | 8 | 1 | 303 | 117 | 375 | 9.30e-34 | 129 |
| MS.gene060077.t1 | AT1G18940 | 28.525 | 305 | 166 | 5 | 1 | 303 | 121 | 375 | 1.23e-31 | 124 |
| MS.gene060077.t1 | AT2G34355 | 31.068 | 309 | 159 | 9 | 1 | 303 | 113 | 373 | 1.30e-31 | 123 |
| MS.gene060077.t1 | AT2G34355 | 43.836 | 73 | 39 | 1 | 233 | 303 | 151 | 223 | 3.09e-14 | 72.8 |
Find 75 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATTGTCCTTCTGTTTC+TGG | 0.103789 | 7.2:+70572503 | None:intergenic |
| AAATCTTTCACGTTGGTTTA+TGG | 0.174292 | 7.2:-70572713 | MS.gene060077:CDS |
| TCGTCTCCATGATCAGTATT+TGG | 0.218122 | 7.2:-70572157 | MS.gene060077:CDS |
| ATGGTCTTAGGTTCTGGATC+TGG | 0.228794 | 7.2:-70572245 | MS.gene060077:CDS |
| ATCAGTATTTGGAACTTTCT+TGG | 0.238824 | 7.2:-70572146 | MS.gene060077:CDS |
| CTACTTCAACACAGTTTCTT+TGG | 0.254430 | 7.2:-70572966 | MS.gene060077:CDS |
| CGGTCAGATGAGCCAGTCTT+TGG | 0.285592 | 7.2:-70572201 | MS.gene060077:CDS |
| CTTGTTGGCTGCTTATTTGA+TGG | 0.308655 | 7.2:-70572681 | MS.gene060077:CDS |
| TCATGCATCGTTAATATTCA+TGG | 0.329075 | 7.2:-70572825 | MS.gene060077:CDS |
| ATTTCCATGGTCTTAGGTTC+TGG | 0.350122 | 7.2:-70572251 | MS.gene060077:CDS |
| AATATTAACGATGCATGATC+AGG | 0.374870 | 7.2:+70572830 | None:intergenic |
| TTCAAAATTTCCCGAAAAGC+CGG | 0.380401 | 7.2:-70572934 | MS.gene060077:CDS |
| CTTATATTTGTGGGAACAAA+TGG | 0.381637 | 7.2:-70572995 | MS.gene060077:CDS |
| TGCTTATTTGATGGGAGTTA+TGG | 0.383685 | 7.2:-70572672 | MS.gene060077:CDS |
| TGGTCTTAGGTTCTGGATCT+GGG | 0.391749 | 7.2:-70572244 | MS.gene060077:CDS |
| TTATGGTGTATGTCTCTTGT+TGG | 0.401325 | 7.2:-70572696 | MS.gene060077:CDS |
| AAAGTTCCAAATACTGATCA+TGG | 0.424968 | 7.2:+70572151 | None:intergenic |
| ATGTGTATTCTTATATTTGT+GGG | 0.431347 | 7.2:-70573004 | MS.gene060077:CDS |
| TCAAAATTTCCCGAAAAGCC+GGG | 0.432516 | 7.2:-70572933 | MS.gene060077:CDS |
| GGGAGCAAGTCCACTTCCTT+AGG | 0.435147 | 7.2:+70572434 | None:intergenic |
| TTGTTGGCTGCTTATTTGAT+GGG | 0.435499 | 7.2:-70572680 | MS.gene060077:CDS |
| AATGACAAAGGAATTATAAT+CGG | 0.440338 | 7.2:+70572572 | None:intergenic |
| ATTCCTTTGTCATTAACCTT+CGG | 0.444957 | 7.2:-70572563 | MS.gene060077:CDS |
| TGAAGTAATATTAAGTGAGT+TGG | 0.445671 | 7.2:-70572468 | MS.gene060077:CDS |
| AAGGAGCTGTGAGGGTTAAG+AGG | 0.447202 | 7.2:-70572349 | MS.gene060077:CDS |
| AACTTTCTTGGACGTGTTGG+AGG | 0.470215 | 7.2:-70572134 | MS.gene060077:CDS |
| GGTCAGATGAGCCAGTCTTT+GGG | 0.473244 | 7.2:-70572200 | MS.gene060077:CDS |
| CAAAGAAACTGTGTTGAAGT+AGG | 0.476111 | 7.2:+70572967 | None:intergenic |
| CGTTTCTGCCTTTCCGACGC+AGG | 0.478111 | 7.2:+70572413 | None:intergenic |
| GGTCCAGCATTGGTAGGAAT+AGG | 0.493698 | 7.2:-70572794 | MS.gene060077:CDS |
| ATGTTCATTGTTAGACCTGT+CGG | 0.494988 | 7.2:-70572767 | MS.gene060077:CDS |
| CTGCTGCAAGCTGCTGCAGA+AGG | 0.495751 | 7.2:-70572368 | MS.gene060077:CDS |
| TTAATATTCATGGTTGCTGT+TGG | 0.497023 | 7.2:-70572815 | MS.gene060077:CDS |
| AGACCTATTCCTACCAATGC+TGG | 0.505924 | 7.2:+70572791 | None:intergenic |
| CCCGAAAAGCCGGGGTCCCG+TGG | 0.506898 | 7.2:-70572924 | MS.gene060077:CDS |
| TTTCTTGGACGTGTTGGAGG+CGG | 0.511820 | 7.2:-70572131 | MS.gene060077:CDS |
| TGGAACTTTCTTGGACGTGT+TGG | 0.513657 | 7.2:-70572137 | MS.gene060077:CDS |
| ACTTGTTTGTGACCTCCGAC+AGG | 0.514273 | 7.2:+70572752 | None:intergenic |
| AAAAGCCGGGGTCCCGTGGT+TGG | 0.515273 | 7.2:-70572920 | MS.gene060077:CDS |
| AGATGAGAAGCCTAAGGAAG+TGG | 0.515527 | 7.2:-70572444 | MS.gene060077:CDS |
| CCCTTTAAAATTCCAACCAC+GGG | 0.526339 | 7.2:+70572908 | None:intergenic |
| GGTTGCTGTTGGTCCAGCAT+TGG | 0.533114 | 7.2:-70572804 | MS.gene060077:CDS |
| AAACAAGTGCGGCCGTCGGA+TGG | 0.533967 | 7.2:-70572737 | MS.gene060077:CDS |
| GCTGTTGGTCCAGCATTGGT+AGG | 0.539156 | 7.2:-70572800 | MS.gene060077:CDS |
| ACGATGCATGATCAGGGGAA+TGG | 0.543155 | 7.2:+70572837 | None:intergenic |
| CATTGTCATATCCCAAAGAC+TGG | 0.548663 | 7.2:+70572189 | None:intergenic |
| AGAAGTGCTTCTTCCTCTAG+AGG | 0.550119 | 7.2:+70572527 | None:intergenic |
| GTTTCTGCCTTTCCGACGCA+GGG | 0.551610 | 7.2:+70572414 | None:intergenic |
| ACTTGCTCCCTGCGTCGGAA+AGG | 0.554542 | 7.2:-70572421 | MS.gene060077:CDS |
| TGCTGCAGAAGGAGCTGTGA+GGG | 0.559996 | 7.2:-70572357 | MS.gene060077:CDS |
| AAGGGCTTTGCTGGATTGAG+TGG | 0.565910 | 7.2:-70572890 | MS.gene060077:CDS |
| GAGCTGTGAGGGTTAAGAGG+AGG | 0.567528 | 7.2:-70572346 | MS.gene060077:CDS |
| CAAAATTTCCCGAAAAGCCG+GGG | 0.569217 | 7.2:-70572932 | MS.gene060077:CDS |
| AAATTCCAACCACGGGACCC+CGG | 0.570142 | 7.2:+70572915 | None:intergenic |
| AGTGGACTTGCTCCCTGCGT+CGG | 0.572578 | 7.2:-70572426 | MS.gene060077:CDS |
| GTTGGAAGATGAGAAGCCTA+AGG | 0.577142 | 7.2:-70572450 | MS.gene060077:CDS |
| GTCATTAACCTTCGGCCCTG+CGG | 0.579108 | 7.2:-70572555 | MS.gene060077:CDS |
| ATATTAACGATGCATGATCA+GGG | 0.581843 | 7.2:+70572831 | None:intergenic |
| GTGAGGGTTAAGAGGAGGAG+AGG | 0.584228 | 7.2:-70572341 | MS.gene060077:CDS |
| GCCCTTTAAAATTCCAACCA+CGG | 0.585494 | 7.2:+70572907 | None:intergenic |
| GTAAAATCTTCTCCTCTATG+TGG | 0.590594 | 7.2:+70572317 | None:intergenic |
| AGATCCAGAACCTAAGACCA+TGG | 0.600742 | 7.2:+70572247 | None:intergenic |
| AGGAGGAGAGGACCACATAG+AGG | 0.606447 | 7.2:-70572329 | MS.gene060077:CDS |
| TTGACTGTAATTGACAATCT+CGG | 0.606676 | 7.2:-70572221 | MS.gene060077:CDS |
| GATGTGTATTCTTATATTTG+TGG | 0.622481 | 7.2:-70573005 | MS.gene060077:CDS |
| GGGCCGAAGGTTAATGACAA+AGG | 0.631796 | 7.2:+70572560 | None:intergenic |
| TTTAATCAAAGCTTGCGTCA+AGG | 0.639178 | 7.2:+70572295 | None:intergenic |
| TCACAAACAAGTGCGGCCGT+CGG | 0.640280 | 7.2:-70572741 | MS.gene060077:CDS |
| GCACTTCTTCCAGAAACAGA+AGG | 0.653183 | 7.2:-70572512 | MS.gene060077:CDS |
| TTCATTGTTAGACCTGTCGG+AGG | 0.667965 | 7.2:-70572764 | MS.gene060077:CDS |
| TATTAACGATGCATGATCAG+GGG | 0.675991 | 7.2:+70572832 | None:intergenic |
| GGATGGAAAATCTTTCACGT+TGG | 0.680385 | 7.2:-70572720 | MS.gene060077:CDS |
| GAATTATAATCGGAGCAATG+AGG | 0.685023 | 7.2:+70572582 | None:intergenic |
| CTGCTGCAGAAGGAGCTGTG+AGG | 0.702176 | 7.2:-70572358 | MS.gene060077:CDS |
| TCGGAGGTCACAAACAAGTG+CGG | 0.705441 | 7.2:-70572748 | MS.gene060077:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGACAAAGGAATTATAAT+CGG | + | chr7.2:70572538-70572557 | None:intergenic | 20.0% |
| !! | ATGTGTATTCTTATATTTGT+GGG | - | chr7.2:70572103-70572122 | MS.gene060077:CDS | 20.0% |
| ! | TGAAGTAATATTAAGTGAGT+TGG | - | chr7.2:70572639-70572658 | MS.gene060077:CDS | 25.0% |
| !! | CTTTGATTAAAGCAGATTTT+TGG | - | chr7.2:70572824-70572843 | MS.gene060077:CDS | 25.0% |
| AAAGTTCCAAATACTGATCA+TGG | + | chr7.2:70572959-70572978 | None:intergenic | 30.0% | |
| AATATTAACGATGCATGATC+AGG | + | chr7.2:70572280-70572299 | None:intergenic | 30.0% | |
| ATATTAACGATGCATGATCA+GGG | + | chr7.2:70572279-70572298 | None:intergenic | 30.0% | |
| ATTCCTTTGTCATTAACCTT+CGG | - | chr7.2:70572544-70572563 | MS.gene060077:CDS | 30.0% | |
| CTTATATTTGTGGGAACAAA+TGG | - | chr7.2:70572112-70572131 | MS.gene060077:CDS | 30.0% | |
| TCATGCATCGTTAATATTCA+TGG | - | chr7.2:70572282-70572301 | MS.gene060077:CDS | 30.0% | |
| TTAATATTCATGGTTGCTGT+TGG | - | chr7.2:70572292-70572311 | MS.gene060077:CDS | 30.0% | |
| TTGACTGTAATTGACAATCT+CGG | - | chr7.2:70572886-70572905 | MS.gene060077:CDS | 30.0% | |
| ! | ATCAGTATTTGGAACTTTCT+TGG | - | chr7.2:70572961-70572980 | MS.gene060077:CDS | 30.0% |
| !! | AAATCTTTCACGTTGGTTTA+TGG | - | chr7.2:70572394-70572413 | MS.gene060077:CDS | 30.0% |
| ATGTTCATTGTTAGACCTGT+CGG | - | chr7.2:70572340-70572359 | MS.gene060077:CDS | 35.0% | |
| CAAAGAAACTGTGTTGAAGT+AGG | + | chr7.2:70572143-70572162 | None:intergenic | 35.0% | |
| CTACTTCAACACAGTTTCTT+TGG | - | chr7.2:70572141-70572160 | MS.gene060077:CDS | 35.0% | |
| GAATTATAATCGGAGCAATG+AGG | + | chr7.2:70572528-70572547 | None:intergenic | 35.0% | |
| GTAAAATCTTCTCCTCTATG+TGG | + | chr7.2:70572793-70572812 | None:intergenic | 35.0% | |
| TATTAACGATGCATGATCAG+GGG | + | chr7.2:70572278-70572297 | None:intergenic | 35.0% | |
| TGCTTATTTGATGGGAGTTA+TGG | - | chr7.2:70572435-70572454 | MS.gene060077:CDS | 35.0% | |
| TTATGGTGTATGTCTCTTGT+TGG | - | chr7.2:70572411-70572430 | MS.gene060077:CDS | 35.0% | |
| TTCAAAATTTCCCGAAAAGC+CGG | - | chr7.2:70572173-70572192 | MS.gene060077:CDS | 35.0% | |
| TTTAATCAAAGCTTGCGTCA+AGG | + | chr7.2:70572815-70572834 | None:intergenic | 35.0% | |
| ! | CTTTTCATTTCCATGGTCTT+AGG | - | chr7.2:70572850-70572869 | MS.gene060077:CDS | 35.0% |
| ! | TTGGCTTCTTTTCATTTCCA+TGG | - | chr7.2:70572843-70572862 | MS.gene060077:CDS | 35.0% |
| ! | TTGTTGGCTGCTTATTTGAT+GGG | - | chr7.2:70572427-70572446 | MS.gene060077:CDS | 35.0% |
| CATTGTCATATCCCAAAGAC+TGG | + | chr7.2:70572921-70572940 | None:intergenic | 40.0% | |
| GAGCAATGAGGATCAAAAAG+AGG | + | chr7.2:70572516-70572535 | None:intergenic | 40.0% | |
| GGATGGAAAATCTTTCACGT+TGG | - | chr7.2:70572387-70572406 | MS.gene060077:CDS | 40.0% | |
| TCAAAATTTCCCGAAAAGCC+GGG | - | chr7.2:70572174-70572193 | MS.gene060077:CDS | 40.0% | |
| TCGTCTCCATGATCAGTATT+TGG | - | chr7.2:70572950-70572969 | MS.gene060077:CDS | 40.0% | |
| TGAGATTGTCCTTCTGTTTC+TGG | + | chr7.2:70572607-70572626 | None:intergenic | 40.0% | |
| ! | ATTTCCATGGTCTTAGGTTC+TGG | - | chr7.2:70572856-70572875 | MS.gene060077:CDS | 40.0% |
| ! | CCCGTGGTTGGAATTTTAAA+GGG | - | chr7.2:70572199-70572218 | MS.gene060077:CDS | 40.0% |
| ! | CTTGTTGGCTGCTTATTTGA+TGG | - | chr7.2:70572426-70572445 | MS.gene060077:CDS | 40.0% |
| ! | GTGAAAGATTTTCCATCCGA+CGG | + | chr7.2:70572385-70572404 | None:intergenic | 40.0% |
| ! | TCCCGTGGTTGGAATTTTAA+AGG | - | chr7.2:70572198-70572217 | MS.gene060077:CDS | 40.0% |
| !! | CCCTTTAAAATTCCAACCAC+GGG | + | chr7.2:70572202-70572221 | None:intergenic | 40.0% |
| !! | GCCCTTTAAAATTCCAACCA+CGG | + | chr7.2:70572203-70572222 | None:intergenic | 40.0% |
| !! | GGAATTTTAAAGGGCTTTGC+TGG | - | chr7.2:70572208-70572227 | MS.gene060077:CDS | 40.0% |
| AACTTTCTTGGACGTGTTGG+AGG | - | chr7.2:70572973-70572992 | MS.gene060077:CDS | 45.0% | |
| AGACCTATTCCTACCAATGC+TGG | + | chr7.2:70572319-70572338 | None:intergenic | 45.0% | |
| AGATCCAGAACCTAAGACCA+TGG | + | chr7.2:70572863-70572882 | None:intergenic | 45.0% | |
| AGATGAGAAGCCTAAGGAAG+TGG | - | chr7.2:70572663-70572682 | MS.gene060077:CDS | 45.0% | |
| CAAAATTTCCCGAAAAGCCG+GGG | - | chr7.2:70572175-70572194 | MS.gene060077:CDS | 45.0% | |
| GCACTTCTTCCAGAAACAGA+AGG | - | chr7.2:70572595-70572614 | MS.gene060077:CDS | 45.0% | |
| GTTGGAAGATGAGAAGCCTA+AGG | - | chr7.2:70572657-70572676 | MS.gene060077:CDS | 45.0% | |
| TGGAACTTTCTTGGACGTGT+TGG | - | chr7.2:70572970-70572989 | MS.gene060077:CDS | 45.0% | |
| TTCATTGTTAGACCTGTCGG+AGG | - | chr7.2:70572343-70572362 | MS.gene060077:CDS | 45.0% | |
| !! | AGAAGTGCTTCTTCCTCTAG+AGG | + | chr7.2:70572583-70572602 | None:intergenic | 45.0% |
| !! | ATGGTCTTAGGTTCTGGATC+TGG | - | chr7.2:70572862-70572881 | MS.gene060077:CDS | 45.0% |
| !! | TGGTCTTAGGTTCTGGATCT+GGG | - | chr7.2:70572863-70572882 | MS.gene060077:CDS | 45.0% |
| AAGGAGCTGTGAGGGTTAAG+AGG | - | chr7.2:70572758-70572777 | MS.gene060077:CDS | 50.0% | |
| AAGGGCTTTGCTGGATTGAG+TGG | - | chr7.2:70572217-70572236 | MS.gene060077:CDS | 50.0% | |
| ACGATGCATGATCAGGGGAA+TGG | + | chr7.2:70572273-70572292 | None:intergenic | 50.0% | |
| ACTTGTTTGTGACCTCCGAC+AGG | + | chr7.2:70572358-70572377 | None:intergenic | 50.0% | |
| GGGCCGAAGGTTAATGACAA+AGG | + | chr7.2:70572550-70572569 | None:intergenic | 50.0% | |
| GGTCAGATGAGCCAGTCTTT+GGG | - | chr7.2:70572907-70572926 | MS.gene060077:CDS | 50.0% | |
| TCGGAGGTCACAAACAAGTG+CGG | - | chr7.2:70572359-70572378 | MS.gene060077:CDS | 50.0% | |
| TTTCTTGGACGTGTTGGAGG+CGG | - | chr7.2:70572976-70572995 | MS.gene060077:CDS | 50.0% | |
| !! | CCTCTAGAGGTTTTTCCGCA+GGG | + | chr7.2:70572570-70572589 | None:intergenic | 50.0% |
| !! | GGTCCAGCATTGGTAGGAAT+AGG | - | chr7.2:70572313-70572332 | MS.gene060077:CDS | 50.0% |
| !! | TCCTCTAGAGGTTTTTCCGC+AGG | + | chr7.2:70572571-70572590 | None:intergenic | 50.0% |
| AAATTCCAACCACGGGACCC+CGG | + | chr7.2:70572195-70572214 | None:intergenic | 55.0% | |
| AGGAGGAGAGGACCACATAG+AGG | - | chr7.2:70572778-70572797 | MS.gene060077:CDS | 55.0% | |
| CCCTGCGGAAAAACCTCTAG+AGG | - | chr7.2:70572567-70572586 | MS.gene060077:CDS | 55.0% | |
| CGGTCAGATGAGCCAGTCTT+TGG | - | chr7.2:70572906-70572925 | MS.gene060077:CDS | 55.0% | |
| GAGCTGTGAGGGTTAAGAGG+AGG | - | chr7.2:70572761-70572780 | MS.gene060077:CDS | 55.0% | |
| GGGAGCAAGTCCACTTCCTT+AGG | + | chr7.2:70572676-70572695 | None:intergenic | 55.0% | |
| GTCATTAACCTTCGGCCCTG+CGG | - | chr7.2:70572552-70572571 | MS.gene060077:CDS | 55.0% | |
| GTGAGGGTTAAGAGGAGGAG+AGG | - | chr7.2:70572766-70572785 | MS.gene060077:CDS | 55.0% | |
| GTTTCTGCCTTTCCGACGCA+GGG | + | chr7.2:70572696-70572715 | None:intergenic | 55.0% | |
| TCACAAACAAGTGCGGCCGT+CGG | - | chr7.2:70572366-70572385 | MS.gene060077:CDS | 55.0% | |
| TGCTGCAGAAGGAGCTGTGA+GGG | - | chr7.2:70572750-70572769 | MS.gene060077:CDS | 55.0% | |
| ! | GGTTGCTGTTGGTCCAGCAT+TGG | - | chr7.2:70572303-70572322 | MS.gene060077:CDS | 55.0% |
| !! | GCTGTTGGTCCAGCATTGGT+AGG | - | chr7.2:70572307-70572326 | MS.gene060077:CDS | 55.0% |
| AAACAAGTGCGGCCGTCGGA+TGG | - | chr7.2:70572370-70572389 | MS.gene060077:CDS | 60.0% | |
| ACTTGCTCCCTGCGTCGGAA+AGG | - | chr7.2:70572686-70572705 | MS.gene060077:CDS | 60.0% | |
| CGTTTCTGCCTTTCCGACGC+AGG | + | chr7.2:70572697-70572716 | None:intergenic | 60.0% | |
| CTGCTGCAAGCTGCTGCAGA+AGG | - | chr7.2:70572739-70572758 | MS.gene060077:CDS | 60.0% | |
| CTGCTGCAGAAGGAGCTGTG+AGG | - | chr7.2:70572749-70572768 | MS.gene060077:CDS | 60.0% | |
| ! | AGGTTTTTCCGCAGGGCCGA+AGG | + | chr7.2:70572563-70572582 | None:intergenic | 60.0% |
| ! | AGTGGACTTGCTCCCTGCGT+CGG | - | chr7.2:70572681-70572700 | MS.gene060077:CDS | 60.0% |
| AAAAGCCGGGGTCCCGTGGT+TGG | - | chr7.2:70572187-70572206 | MS.gene060077:CDS | 65.0% | |
| ! | ACCACGGGACCCCGGCTTTT+CGG | + | chr7.2:70572187-70572206 | None:intergenic | 65.0% |
| ! | CCACGGGACCCCGGCTTTTC+GGG | + | chr7.2:70572186-70572205 | None:intergenic | 70.0% |
| CCCGAAAAGCCGGGGTCCCG+TGG | - | chr7.2:70572183-70572202 | MS.gene060077:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 70572103 | 70573026 | 70572103 | ID=MS.gene060077 |
| chr7.2 | mRNA | 70572103 | 70573026 | 70572103 | ID=MS.gene060077.t1;Parent=MS.gene060077 |
| chr7.2 | exon | 70572103 | 70573026 | 70572103 | ID=MS.gene060077.t1.exon1;Parent=MS.gene060077.t1 |
| chr7.2 | CDS | 70572103 | 70573026 | 70572103 | ID=cds.MS.gene060077.t1;Parent=MS.gene060077.t1 |
| Gene Sequence |
| Protein sequence |
