Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22694.t1 | KEH24626.1 | 97.1 | 718 | 21 | 0 | 1 | 718 | 13 | 730 | 0.00E+00 | 1335.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22694.t1 | Q9LD40 | 58.3 | 710 | 266 | 7 | 9 | 714 | 9 | 692 | 1.5e-231 | 803.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22694.t1 | G7L436 | 97.1 | 718 | 21 | 0 | 1 | 718 | 1 | 718 | 0.0e+00 | 1335.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049409 | MS.gene22694 | 0.802842 | 4.63E-49 | -1.69E-46 |
MS.gene050645 | MS.gene22694 | 0.996373 | 1.05E-226 | -1.69E-46 |
MS.gene052637 | MS.gene22694 | 0.824692 | 7.03E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22694.t1 | MTR_7g117310 | 97.632 | 718 | 17 | 0 | 1 | 718 | 1 | 718 | 0.0 | 1455 |
MS.gene22694.t1 | MTR_7g117310 | 97.632 | 718 | 17 | 0 | 1 | 718 | 13 | 730 | 0.0 | 1455 |
MS.gene22694.t1 | MTR_7g117310 | 97.741 | 664 | 15 | 0 | 55 | 718 | 1 | 664 | 0.0 | 1352 |
MS.gene22694.t1 | MTR_8g027755 | 66.760 | 716 | 201 | 6 | 11 | 718 | 36 | 722 | 0.0 | 964 |
MS.gene22694.t1 | MTR_3g091080 | 65.175 | 715 | 238 | 7 | 7 | 718 | 7 | 713 | 0.0 | 949 |
MS.gene22694.t1 | MTR_1g028370 | 63.598 | 717 | 240 | 8 | 7 | 714 | 8 | 712 | 0.0 | 911 |
MS.gene22694.t1 | MTR_4g130820 | 52.684 | 708 | 309 | 10 | 16 | 715 | 38 | 727 | 0.0 | 723 |
MS.gene22694.t1 | MTR_2g460590 | 50.647 | 695 | 300 | 10 | 54 | 716 | 4 | 687 | 0.0 | 681 |
MS.gene22694.t1 | MTR_2g094860 | 52.181 | 642 | 284 | 9 | 83 | 716 | 77 | 703 | 0.0 | 670 |
MS.gene22694.t1 | MTR_3g109030 | 50.830 | 663 | 290 | 9 | 80 | 716 | 70 | 722 | 0.0 | 666 |
MS.gene22694.t1 | MTR_7g034605 | 49.486 | 681 | 315 | 9 | 52 | 714 | 9 | 678 | 0.0 | 660 |
MS.gene22694.t1 | MTR_4g058730 | 54.625 | 573 | 240 | 8 | 80 | 644 | 56 | 616 | 0.0 | 647 |
MS.gene22694.t1 | MTR_1g064240 | 47.690 | 671 | 321 | 10 | 60 | 713 | 48 | 705 | 0.0 | 638 |
MS.gene22694.t1 | MTR_3g088875 | 49.472 | 663 | 295 | 10 | 82 | 714 | 35 | 687 | 0.0 | 636 |
MS.gene22694.t1 | MTR_6g477760 | 39.310 | 580 | 322 | 11 | 83 | 644 | 123 | 690 | 2.39e-126 | 392 |
MS.gene22694.t1 | MTR_6g075290 | 38.356 | 584 | 327 | 10 | 82 | 648 | 192 | 759 | 3.88e-120 | 377 |
MS.gene22694.t1 | MTR_5g007630 | 37.713 | 586 | 330 | 13 | 83 | 654 | 172 | 736 | 2.28e-119 | 375 |
MS.gene22694.t1 | MTR_6g075440 | 35.088 | 570 | 342 | 12 | 83 | 637 | 169 | 725 | 9.27e-114 | 361 |
MS.gene22694.t1 | MTR_6g075440 | 35.088 | 570 | 342 | 12 | 83 | 637 | 169 | 725 | 1.20e-113 | 361 |
MS.gene22694.t1 | MTR_8g464570 | 34.662 | 577 | 342 | 10 | 84 | 640 | 63 | 624 | 1.23e-113 | 358 |
MS.gene22694.t1 | MTR_2g081110 | 34.708 | 582 | 342 | 10 | 78 | 640 | 58 | 620 | 2.91e-112 | 354 |
MS.gene22694.t1 | MTR_6g075290 | 38.603 | 544 | 301 | 10 | 122 | 648 | 30 | 557 | 1.84e-108 | 341 |
MS.gene22694.t1 | MTR_6g075290 | 38.559 | 555 | 305 | 11 | 111 | 648 | 183 | 718 | 2.50e-107 | 343 |
MS.gene22694.t1 | MTR_7g012260 | 34.768 | 581 | 341 | 12 | 82 | 640 | 108 | 672 | 3.38e-100 | 323 |
MS.gene22694.t1 | MTR_6g075390 | 32.973 | 555 | 339 | 10 | 82 | 620 | 114 | 651 | 3.45e-92 | 301 |
MS.gene22694.t1 | MTR_6g075410 | 31.175 | 587 | 362 | 13 | 82 | 648 | 97 | 661 | 4.75e-84 | 280 |
MS.gene22694.t1 | MTR_6g076060 | 33.700 | 454 | 273 | 11 | 200 | 638 | 14 | 454 | 1.38e-68 | 234 |
MS.gene22694.t1 | MTR_2g094810 | 47.706 | 109 | 57 | 0 | 162 | 270 | 12 | 120 | 3.22e-29 | 112 |
MS.gene22694.t1 | MTR_6g075320 | 38.655 | 119 | 73 | 0 | 82 | 200 | 148 | 266 | 1.54e-25 | 108 |
MS.gene22694.t1 | MTR_4g113530 | 20.945 | 487 | 285 | 15 | 83 | 560 | 46 | 441 | 2.76e-17 | 87.0 |
MS.gene22694.t1 | MTR_3g108320 | 26.733 | 202 | 143 | 3 | 360 | 560 | 245 | 442 | 9.60e-16 | 81.3 |
MS.gene22694.t1 | MTR_3g108320 | 26.733 | 202 | 143 | 3 | 360 | 560 | 245 | 442 | 1.01e-15 | 81.3 |
MS.gene22694.t1 | MTR_3g108320 | 26.471 | 204 | 145 | 3 | 358 | 560 | 243 | 442 | 1.33e-15 | 81.3 |
MS.gene22694.t1 | MTR_2g006870 | 24.138 | 261 | 191 | 4 | 357 | 615 | 262 | 517 | 4.33e-14 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22694.t1 | AT5G53130 | 63.900 | 723 | 244 | 10 | 1 | 715 | 1 | 714 | 0.0 | 920 |
MS.gene22694.t1 | AT4G01010 | 60.282 | 710 | 252 | 7 | 9 | 714 | 9 | 692 | 0.0 | 883 |
MS.gene22694.t1 | AT4G01010 | 60.282 | 710 | 252 | 7 | 9 | 714 | 9 | 692 | 0.0 | 883 |
MS.gene22694.t1 | AT1G01340 | 60.086 | 694 | 256 | 5 | 31 | 716 | 21 | 701 | 0.0 | 863 |
MS.gene22694.t1 | AT1G01340 | 60.086 | 694 | 256 | 5 | 31 | 716 | 26 | 706 | 0.0 | 863 |
MS.gene22694.t1 | AT2G46430 | 58.159 | 717 | 279 | 10 | 1 | 713 | 2 | 701 | 0.0 | 838 |
MS.gene22694.t1 | AT2G46430 | 58.159 | 717 | 279 | 10 | 1 | 713 | 2 | 701 | 0.0 | 838 |
MS.gene22694.t1 | AT4G30560 | 52.204 | 726 | 314 | 12 | 7 | 715 | 20 | 729 | 0.0 | 739 |
MS.gene22694.t1 | AT4G30560 | 52.204 | 726 | 314 | 12 | 7 | 715 | 20 | 729 | 0.0 | 739 |
MS.gene22694.t1 | AT5G57940 | 52.335 | 728 | 322 | 10 | 1 | 715 | 1 | 716 | 0.0 | 738 |
MS.gene22694.t1 | AT5G57940 | 52.335 | 728 | 322 | 10 | 1 | 715 | 1 | 716 | 0.0 | 738 |
MS.gene22694.t1 | AT4G30560 | 54.015 | 685 | 289 | 9 | 45 | 715 | 31 | 703 | 0.0 | 736 |
MS.gene22694.t1 | AT4G30560 | 54.015 | 685 | 289 | 9 | 45 | 715 | 31 | 703 | 0.0 | 736 |
MS.gene22694.t1 | AT4G30560 | 54.015 | 685 | 289 | 9 | 45 | 715 | 31 | 703 | 0.0 | 736 |
MS.gene22694.t1 | AT2G23980 | 51.344 | 744 | 311 | 13 | 8 | 718 | 22 | 747 | 0.0 | 736 |
MS.gene22694.t1 | AT2G23980 | 51.344 | 744 | 311 | 13 | 8 | 718 | 22 | 747 | 0.0 | 736 |
MS.gene22694.t1 | AT2G23980 | 51.344 | 744 | 311 | 13 | 8 | 718 | 22 | 747 | 0.0 | 736 |
MS.gene22694.t1 | AT2G23980 | 51.344 | 744 | 311 | 13 | 8 | 718 | 22 | 747 | 0.0 | 736 |
MS.gene22694.t1 | AT2G23980 | 51.344 | 744 | 311 | 13 | 8 | 718 | 22 | 747 | 0.0 | 736 |
MS.gene22694.t1 | AT2G23980 | 51.429 | 735 | 308 | 12 | 17 | 718 | 2 | 720 | 0.0 | 734 |
MS.gene22694.t1 | AT5G57940 | 52.000 | 725 | 322 | 10 | 1 | 715 | 1 | 709 | 0.0 | 733 |
MS.gene22694.t1 | AT2G23980 | 49.935 | 767 | 310 | 14 | 8 | 718 | 22 | 770 | 0.0 | 723 |
MS.gene22694.t1 | AT2G23980 | 49.935 | 767 | 310 | 14 | 8 | 718 | 22 | 770 | 0.0 | 723 |
MS.gene22694.t1 | AT2G23980 | 49.935 | 767 | 310 | 14 | 8 | 718 | 22 | 770 | 0.0 | 723 |
MS.gene22694.t1 | AT2G23980 | 49.935 | 767 | 310 | 14 | 8 | 718 | 22 | 770 | 0.0 | 723 |
MS.gene22694.t1 | AT1G19780 | 49.146 | 761 | 308 | 14 | 7 | 715 | 13 | 746 | 0.0 | 701 |
MS.gene22694.t1 | AT1G15990 | 49.867 | 750 | 312 | 16 | 7 | 716 | 13 | 738 | 0.0 | 691 |
MS.gene22694.t1 | AT2G24610 | 51.647 | 668 | 277 | 11 | 80 | 714 | 69 | 723 | 0.0 | 677 |
MS.gene22694.t1 | AT2G24610 | 51.647 | 668 | 277 | 11 | 80 | 714 | 84 | 738 | 0.0 | 675 |
MS.gene22694.t1 | AT2G28260 | 51.613 | 651 | 278 | 10 | 73 | 716 | 58 | 678 | 0.0 | 662 |
MS.gene22694.t1 | AT2G28260 | 51.767 | 651 | 277 | 10 | 73 | 716 | 18 | 638 | 0.0 | 661 |
MS.gene22694.t1 | AT5G14870 | 48.744 | 677 | 298 | 11 | 80 | 717 | 37 | 703 | 0.0 | 647 |
MS.gene22694.t1 | AT4G30360 | 49.924 | 661 | 294 | 11 | 81 | 716 | 69 | 717 | 0.0 | 645 |
MS.gene22694.t1 | AT3G48010 | 46.317 | 706 | 325 | 14 | 52 | 713 | 9 | 704 | 0.0 | 627 |
MS.gene22694.t1 | AT2G46440 | 50.569 | 615 | 291 | 8 | 69 | 676 | 13 | 621 | 0.0 | 605 |
MS.gene22694.t1 | AT2G46450 | 45.142 | 669 | 334 | 12 | 52 | 713 | 2 | 644 | 0.0 | 574 |
MS.gene22694.t1 | AT2G46450 | 45.142 | 669 | 334 | 12 | 52 | 713 | 2 | 644 | 0.0 | 574 |
MS.gene22694.t1 | AT1G19780 | 52.564 | 546 | 218 | 10 | 199 | 715 | 2 | 535 | 0.0 | 545 |
MS.gene22694.t1 | AT2G46450 | 43.582 | 670 | 322 | 13 | 52 | 714 | 2 | 622 | 0.0 | 540 |
MS.gene22694.t1 | AT2G46450 | 44.086 | 651 | 314 | 12 | 71 | 714 | 2 | 609 | 0.0 | 538 |
MS.gene22694.t1 | AT2G46440 | 55.180 | 444 | 191 | 6 | 238 | 676 | 3 | 443 | 9.43e-162 | 474 |
MS.gene22694.t1 | AT3G17690 | 35.593 | 590 | 355 | 10 | 71 | 647 | 142 | 719 | 1.31e-123 | 385 |
MS.gene22694.t1 | AT3G17700 | 36.473 | 584 | 342 | 10 | 70 | 637 | 175 | 745 | 5.22e-116 | 367 |
MS.gene22694.t1 | AT5G54250 | 34.359 | 585 | 341 | 12 | 82 | 640 | 78 | 645 | 5.71e-110 | 349 |
MS.gene22694.t1 | AT5G54250 | 34.359 | 585 | 341 | 12 | 82 | 640 | 78 | 645 | 5.71e-110 | 349 |
MS.gene22694.t1 | AT5G54250 | 34.359 | 585 | 341 | 12 | 82 | 640 | 78 | 645 | 5.71e-110 | 349 |
MS.gene22694.t1 | AT3G17690 | 35.657 | 502 | 307 | 6 | 71 | 567 | 142 | 632 | 7.18e-108 | 342 |
MS.gene22694.t1 | AT5G15410 | 34.609 | 601 | 360 | 11 | 62 | 637 | 84 | 676 | 9.63e-108 | 344 |
MS.gene22694.t1 | AT5G15410 | 34.609 | 601 | 360 | 11 | 62 | 637 | 85 | 677 | 1.23e-107 | 343 |
MS.gene22694.t1 | AT5G54250 | 33.846 | 585 | 339 | 13 | 82 | 640 | 78 | 640 | 1.04e-104 | 335 |
MS.gene22694.t1 | AT3G17700 | 36.576 | 514 | 295 | 8 | 70 | 571 | 175 | 669 | 3.68e-103 | 331 |
MS.gene22694.t1 | AT3G17690 | 32.895 | 380 | 246 | 4 | 70 | 444 | 141 | 516 | 1.81e-70 | 239 |
MS.gene22694.t1 | AT4G22200 | 21.379 | 435 | 270 | 12 | 127 | 560 | 100 | 463 | 8.70e-16 | 81.6 |
MS.gene22694.t1 | AT4G22200 | 21.379 | 435 | 270 | 12 | 127 | 560 | 100 | 463 | 1.08e-15 | 81.6 |
MS.gene22694.t1 | AT4G32650 | 23.153 | 203 | 153 | 2 | 358 | 560 | 276 | 475 | 3.23e-12 | 70.5 |
MS.gene22694.t1 | AT4G32650 | 23.153 | 203 | 153 | 2 | 358 | 560 | 276 | 475 | 3.41e-12 | 70.5 |
MS.gene22694.t1 | AT4G32650 | 23.153 | 203 | 153 | 2 | 358 | 560 | 276 | 475 | 3.79e-12 | 70.1 |
Find 108 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGTCTGTCCTTCATTTAC+AGG | 0.139208 | 7.4:+1135522 | None:intergenic |
GACACAAAGACCTTCAATTT+TGG | 0.153222 | 7.4:-1134329 | MS.gene22694:CDS |
ATGTCTCTTCTGAGATCTTT+AGG | 0.165544 | 7.4:+1133455 | None:intergenic |
TGTTGATAAGACGTCTAAAT+TGG | 0.175315 | 7.4:+1132938 | None:intergenic |
AACATTGTCACAGAAATATT+TGG | 0.196110 | 7.4:-1133648 | MS.gene22694:intron |
GGTATTTCAGATTATTGTTT+TGG | 0.212364 | 7.4:-1134831 | MS.gene22694:intron |
AACAACTCCAACACACTTTC+AGG | 0.217196 | 7.4:-1132912 | MS.gene22694:intron |
GGTGGGGTTTGCGAAATTTA+AGG | 0.232956 | 7.4:-1134229 | MS.gene22694:intron |
AGAAGTTCTTCTACTGCTTT+TGG | 0.250588 | 7.4:-1134250 | MS.gene22694:CDS |
GATCTTTCATGATTCATTCT+TGG | 0.252507 | 7.4:-1134429 | MS.gene22694:CDS |
GGTGCCAATGTTTGAGAAAA+TGG | 0.252844 | 7.4:-1133289 | MS.gene22694:CDS |
ATTCTTTGCTTCAAGTTATC+AGG | 0.254362 | 7.4:+1133548 | None:intergenic |
TGTCTCTTCTGAGATCTTTA+GGG | 0.282650 | 7.4:+1133456 | None:intergenic |
ATCTTTCATGATTCATTCTT+GGG | 0.294155 | 7.4:-1134428 | MS.gene22694:CDS |
TTTGTGTCCTTGATTTCATC+AGG | 0.318413 | 7.4:+1134344 | None:intergenic |
ATTTGGAATCTACAACTGTT+AGG | 0.325785 | 7.4:-1133631 | MS.gene22694:CDS |
GGTAGATTCGAGGAGGAGTT+TGG | 0.326898 | 7.4:+1133042 | None:intergenic |
CATGATTCATTCTTGGGTTG+TGG | 0.339182 | 7.4:-1134422 | MS.gene22694:CDS |
AAATCAGGCTCAGCTGGCTT+TGG | 0.369096 | 7.4:+1132557 | None:intergenic |
AGCTAACTGGTATCTGCTTT+CGG | 0.371915 | 7.4:-1134498 | MS.gene22694:CDS |
GTCATTCCAGGTTTGATGAT+TGG | 0.372248 | 7.4:-1135701 | MS.gene22694:intron |
ATGAAAAGCATCTCATCAAC+TGG | 0.403707 | 7.4:+1133183 | None:intergenic |
ACAACAAATGGTGGAAGAAC+TGG | 0.406941 | 7.4:-1133135 | MS.gene22694:CDS |
AACTCATTATTTCTAATGCC+TGG | 0.409859 | 7.4:-1133105 | MS.gene22694:CDS |
ATCATCTTTCAGTTCAGAAC+CGG | 0.410694 | 7.4:-1135273 | MS.gene22694:CDS |
TCAGGCTCAGCTGGCTTTGG+AGG | 0.411708 | 7.4:+1132560 | None:intergenic |
GGACGAATTCGCAGTAGTCT+TGG | 0.426942 | 7.4:+1134728 | None:intergenic |
CTCTTCTCTGTATACAGAAC+TGG | 0.432902 | 7.4:+1133228 | None:intergenic |
ATCAGGTGGTTGGAGCTAAC+TGG | 0.435899 | 7.4:-1134511 | MS.gene22694:intron |
AGAAGAAGGCGCAATAAATC+CGG | 0.441145 | 7.4:+1135254 | None:intergenic |
ATCAATTATTCCACTTCCAC+AGG | 0.444563 | 7.4:-1135145 | MS.gene22694:intron |
TCTCAACAATACTTGTAGTT+CGG | 0.447827 | 7.4:-1134372 | MS.gene22694:CDS |
GTTGATAAGACGTCTAAATT+GGG | 0.453470 | 7.4:+1132939 | None:intergenic |
AGACAAGCTACAAGATGCTT+TGG | 0.455256 | 7.4:-1132714 | MS.gene22694:CDS |
TCTTCCACCATTTGTTGTCA+TGG | 0.459499 | 7.4:+1133140 | None:intergenic |
GAAAATGGATGCGCAATTGT+TGG | 0.462399 | 7.4:-1133274 | MS.gene22694:CDS |
AGGGGCCTATGCTTCAGAAA+TGG | 0.463837 | 7.4:-1135461 | MS.gene22694:CDS |
ATTCAGAAGACCCTCTTCAA+TGG | 0.464748 | 7.4:-1135550 | MS.gene22694:CDS |
AAAGAAGTAACTAGAACTTC+AGG | 0.467604 | 7.4:-1134698 | MS.gene22694:CDS |
GCAGTGAAATCAGGCTCAGC+TGG | 0.470966 | 7.4:+1132551 | None:intergenic |
TTTGGAATCTACAACTGTTA+GGG | 0.471097 | 7.4:-1133630 | MS.gene22694:CDS |
ATGTAAGATACCTGTGGAAG+TGG | 0.474345 | 7.4:+1135135 | None:intergenic |
GTCGCTACCATGACAACAAA+TGG | 0.479163 | 7.4:-1133147 | MS.gene22694:CDS |
AATTCCAAACTTGAAAAGCT+CGG | 0.479446 | 7.4:-1134804 | MS.gene22694:CDS |
GCGCAAAATTCTTGATCCAC+AGG | 0.484054 | 7.4:-1135481 | MS.gene22694:CDS |
TGAAGGACAGACAAAGAAGT+TGG | 0.488740 | 7.4:-1135514 | MS.gene22694:CDS |
TCTACTGTTCTAGTTGAAGT+AGG | 0.489534 | 7.4:+1133021 | None:intergenic |
ATTCCAAACTTGAAAAGCTC+GGG | 0.492361 | 7.4:-1134803 | MS.gene22694:CDS |
TAGAATCACAGGTGCGGTGT+TGG | 0.493114 | 7.4:-1134475 | MS.gene22694:CDS |
TTGTTCCATTTCTGAAGCAT+AGG | 0.493360 | 7.4:+1135456 | None:intergenic |
CGCAAAATTCTTGATCCACA+GGG | 0.496850 | 7.4:-1135480 | MS.gene22694:CDS |
GTAAAATATTCCAAAATTGA+AGG | 0.500942 | 7.4:+1134319 | None:intergenic |
TTGTCTGTCCTTCATTTACA+GGG | 0.501508 | 7.4:+1135523 | None:intergenic |
AAGAGATGAGAGTGAAGAGG+AGG | 0.503300 | 7.4:-1133604 | MS.gene22694:CDS |
AGAGATGAGAGTGAAGAGGA+GGG | 0.512738 | 7.4:-1133603 | MS.gene22694:CDS |
GTGCAACAATATATGCATCA+AGG | 0.513200 | 7.4:-1132661 | MS.gene22694:CDS |
GAAGGTATGAACAATACAAA+TGG | 0.513283 | 7.4:-1133523 | MS.gene22694:CDS |
ACAAGATGCTTTGGCAAATG+AGG | 0.517602 | 7.4:-1132705 | MS.gene22694:CDS |
GCTGGCTTTGGAGGCAAAAG+AGG | 0.520461 | 7.4:+1132569 | None:intergenic |
TTGACAGAGACAGCATGGGC+TGG | 0.520818 | 7.4:-1134671 | MS.gene22694:CDS |
AGTTGAAGCATTTGCACTCA+AGG | 0.523020 | 7.4:-1132986 | MS.gene22694:CDS |
TACAAATGGCAAGAAAATAG+AGG | 0.529141 | 7.4:-1133509 | MS.gene22694:CDS |
CGTGTTTCATACAAGCAGCT+TGG | 0.529225 | 7.4:-1132784 | MS.gene22694:CDS |
ATTACTTATTGGAAACATGC+AGG | 0.534257 | 7.4:-1133977 | MS.gene22694:intron |
CTCTTCTGAGATCTTTAGGG+AGG | 0.539483 | 7.4:+1133459 | None:intergenic |
ATGGTTCACCCTGTAAATGA+AGG | 0.544076 | 7.4:-1135531 | MS.gene22694:CDS |
TCTGCTTTCGGTAGAATCAC+AGG | 0.550889 | 7.4:-1134486 | MS.gene22694:CDS |
TGACATAAGTAGTTGTCTTG+AGG | 0.551121 | 7.4:+1134052 | None:intergenic |
AGTTGAAGTAGGTAGATTCG+AGG | 0.551450 | 7.4:+1133032 | None:intergenic |
GAAGGATCAACTATAAGCCT+TGG | 0.552180 | 7.4:-1132683 | MS.gene22694:CDS |
AGGAAGAGATGAGAGTGAAG+AGG | 0.555226 | 7.4:-1133607 | MS.gene22694:CDS |
ATTCGCCGCAATGGAAGACA+TGG | 0.558436 | 7.4:-1132811 | MS.gene22694:CDS |
AGCAACAAACTTCAAGTCAT+CGG | 0.560042 | 7.4:+1132963 | None:intergenic |
GGTTGACCCTGATGAAATCA+AGG | 0.563314 | 7.4:-1134351 | MS.gene22694:CDS |
TTGTGTCCTTGATTTCATCA+GGG | 0.564618 | 7.4:+1134345 | None:intergenic |
TTCAAAACAGCACTTACACT+TGG | 0.564904 | 7.4:+1135618 | None:intergenic |
CTTTGTAATCACATGTGTGC+TGG | 0.566586 | 7.4:-1135430 | MS.gene22694:CDS |
CTAGTTACTTCTTTGAATAG+CGG | 0.567096 | 7.4:+1134707 | None:intergenic |
GCATATTGACAGAGACAGCA+TGG | 0.567615 | 7.4:-1134676 | MS.gene22694:CDS |
CGATGCTCTACAATCACTTG+TGG | 0.568191 | 7.4:-1134297 | MS.gene22694:CDS |
GCTGTGGCATATCAGGTGGT+TGG | 0.570471 | 7.4:-1134521 | MS.gene22694:intron |
CATGACTTGCTAGCATGTAG+AGG | 0.576581 | 7.4:+1134630 | None:intergenic |
AGCCATACCTGAAAGTGTGT+TGG | 0.577823 | 7.4:+1132905 | None:intergenic |
CAAAGGGACTTAAATTTGTG+AGG | 0.583675 | 7.4:-1135832 | MS.gene22694:intron |
ATGTGTGCTGGCAATTTCTG+TGG | 0.584670 | 7.4:-1135418 | MS.gene22694:CDS |
TTCTGAAGCATAGGCCCCTG+TGG | 0.593264 | 7.4:+1135465 | None:intergenic |
GATGCTTTGGCAAATGAGGA+AGG | 0.599672 | 7.4:-1132701 | MS.gene22694:CDS |
TGAAGTAGGTAGATTCGAGG+AGG | 0.612728 | 7.4:+1133035 | None:intergenic |
GAAGGTCATATTCGCCGCAA+TGG | 0.616822 | 7.4:-1132820 | MS.gene22694:intron |
CAAGACAACTACTTATGTCA+CGG | 0.621549 | 7.4:-1134049 | MS.gene22694:CDS |
GGAATCTACAACTGTTAGGG+AGG | 0.622363 | 7.4:-1133627 | MS.gene22694:CDS |
TACAGGGTGAACCATTGAAG+AGG | 0.623504 | 7.4:+1135539 | None:intergenic |
AAGCAGTAGAAGAACTTCTG+AGG | 0.632929 | 7.4:+1134254 | None:intergenic |
ACAGGGTGAACCATTGAAGA+GGG | 0.633047 | 7.4:+1135540 | None:intergenic |
ACTTGAAGCAAAGAATTCGA+AGG | 0.635824 | 7.4:-1133541 | MS.gene22694:CDS |
AGAGGAGGGATGCAGAACGA+TGG | 0.648495 | 7.4:-1133589 | MS.gene22694:CDS |
TTCGCCGCAATGGAAGACAT+GGG | 0.649271 | 7.4:-1132810 | MS.gene22694:CDS |
ATTGGAAGAAGATTTGTGAG+TGG | 0.657972 | 7.4:-1135591 | MS.gene22694:CDS |
CATATTGACAGAGACAGCAT+GGG | 0.658548 | 7.4:-1134675 | MS.gene22694:CDS |
ATGCATATATTGTTGCACCA+AGG | 0.658649 | 7.4:+1132666 | None:intergenic |
GAACTTCTGAGGAAAATCTG+TGG | 0.660686 | 7.4:+1134265 | None:intergenic |
AATGGCAATGAAAATCGCAA+AGG | 0.663936 | 7.4:+1134020 | None:intergenic |
GCTACCATGACAACAAATGG+TGG | 0.669524 | 7.4:-1133144 | MS.gene22694:CDS |
TCGCCGCAATGGAAGACATG+GGG | 0.689004 | 7.4:-1132809 | MS.gene22694:CDS |
GCACCCCATGTCTTCCATTG+CGG | 0.689623 | 7.4:+1132806 | None:intergenic |
TTTCGGTAGAATCACAGGTG+CGG | 0.705875 | 7.4:-1134481 | MS.gene22694:CDS |
AAAAGAGGTAGTAGTCTCTG+CGG | 0.729813 | 7.4:+1132584 | None:intergenic |
GCAAAATTCTTGATCCACAG+GGG | 0.734232 | 7.4:-1135479 | MS.gene22694:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATTAAGAGAAAATA+TGG | + | chr7.4:1135505-1135524 | None:intergenic | 10.0% |
!!! | AAATTTATACTATTTTTTGA+AGG | - | chr7.4:1135539-1135558 | MS.gene22694:CDS | 10.0% |
!!! | TTTTTCTCATATATTTTATA+GGG | - | chr7.4:1134465-1134484 | MS.gene22694:CDS | 10.0% |
!! | TATATTATATTAGTATATGC+AGG | + | chr7.4:1132585-1132604 | None:intergenic | 15.0% |
!! | TTCAAATTAATAACAAGATT+TGG | - | chr7.4:1132638-1132657 | MS.gene22694:CDS | 15.0% |
!!! | GTTTTTCTCATATATTTTAT+AGG | - | chr7.4:1134464-1134483 | MS.gene22694:CDS | 15.0% |
!! | ACGAAAAATGATTTAATTGT+GGG | + | chr7.4:1135003-1135022 | None:intergenic | 20.0% |
!! | AGCTCATTAATTAATAAAAG+AGG | + | chr7.4:1134695-1134714 | None:intergenic | 20.0% |
!! | ATTGTAAAAAGAAAATTGAG+AGG | - | chr7.4:1135623-1135642 | MS.gene22694:CDS | 20.0% |
!! | GTAAAATATTCCAAAATTGA+AGG | + | chr7.4:1134061-1134080 | None:intergenic | 20.0% |
!! | TAAACAAAAATGTCTTGATT+TGG | - | chr7.4:1133016-1133035 | MS.gene22694:CDS | 20.0% |
!! | TATTAGATCATTGATATGAA+AGG | - | chr7.4:1134442-1134461 | MS.gene22694:CDS | 20.0% |
!! | TTATGCTTATTTAAATCACT+TGG | + | chr7.4:1134567-1134586 | None:intergenic | 20.0% |
!! | TTATTTAAATCACTTGGATT+AGG | + | chr7.4:1134561-1134580 | None:intergenic | 20.0% |
!! | TTTCATATCAATGATCTAAT+AGG | + | chr7.4:1134443-1134462 | None:intergenic | 20.0% |
!!! | AAATTTTCCATTGAAAAAAC+TGG | + | chr7.4:1134245-1134264 | None:intergenic | 20.0% |
!!! | AATTTTCCATTGAAAAAACT+GGG | + | chr7.4:1134244-1134263 | None:intergenic | 20.0% |
!!! | ACATAATTTTGTTGTTGTTT+TGG | - | chr7.4:1133525-1133544 | MS.gene22694:CDS | 20.0% |
!!! | ATGTTCTTTAATTTTGCATT+AGG | - | chr7.4:1135067-1135086 | MS.gene22694:intron | 20.0% |
!!! | TTTTTTGTTTTCAGTTAAGT+TGG | - | chr7.4:1133445-1133464 | MS.gene22694:CDS | 20.0% |
! | AAAATGATTTAATTGTGGGA+TGG | + | chr7.4:1134999-1135018 | None:intergenic | 25.0% |
! | AACAAATCCTTTGCTAAAAA+TGG | + | chr7.4:1133601-1133620 | None:intergenic | 25.0% |
! | AACATTGTCACAGAAATATT+TGG | - | chr7.4:1134729-1134748 | MS.gene22694:CDS | 25.0% |
! | AATTTCTAACTATCCAACTT+AGG | + | chr7.4:1132619-1132638 | None:intergenic | 25.0% |
! | ACTGGAATGTAAAAGAAAAA+AGG | + | chr7.4:1132987-1133006 | None:intergenic | 25.0% |
! | ATCTTTCATGATTCATTCTT+GGG | - | chr7.4:1133949-1133968 | MS.gene22694:intron | 25.0% |
! | CTGGAATGTAAAAGAAAAAA+GGG | + | chr7.4:1132986-1133005 | None:intergenic | 25.0% |
! | GAATAAAACCAATCCAAAAA+TGG | + | chr7.4:1134378-1134397 | None:intergenic | 25.0% |
! | GACGAAAAATGATTTAATTG+TGG | + | chr7.4:1135004-1135023 | None:intergenic | 25.0% |
! | TATGACAAATGAGTTTACTT+TGG | + | chr7.4:1133382-1133401 | None:intergenic | 25.0% |
!! | ACTCAAGTATCTTTTCATTA+TGG | + | chr7.4:1133189-1133208 | None:intergenic | 25.0% |
!! | GGTATTTCAGATTATTGTTT+TGG | - | chr7.4:1133546-1133565 | MS.gene22694:CDS | 25.0% |
!!! | GTCCATTTTTGCTTAATTTT+CGG | - | chr7.4:1134641-1134660 | MS.gene22694:CDS | 25.0% |
!!! | GTTTTATTCGCATTACTTAT+TGG | - | chr7.4:1134389-1134408 | MS.gene22694:CDS | 25.0% |
!!! | TAATCTTAGTTTTCCTAAGT+TGG | - | chr7.4:1132603-1132622 | MS.gene22694:CDS | 25.0% |
AAAGAAGTAACTAGAACTTC+AGG | - | chr7.4:1133679-1133698 | MS.gene22694:intron | 30.0% | |
AATTCCAAACTTGAAAAGCT+CGG | - | chr7.4:1133573-1133592 | MS.gene22694:CDS | 30.0% | |
ATTACTTATTGGAAACATGC+AGG | - | chr7.4:1134400-1134419 | MS.gene22694:CDS | 30.0% | |
ATTTAATTGTGGGATGGTTA+TGG | + | chr7.4:1134993-1135012 | None:intergenic | 30.0% | |
CAAGATATTATGTAAACACG+TGG | + | chr7.4:1135026-1135045 | None:intergenic | 30.0% | |
CTAGTTACTTCTTTGAATAG+CGG | + | chr7.4:1133673-1133692 | None:intergenic | 30.0% | |
CTCCGAAAATTAAGCAAAAA+TGG | + | chr7.4:1134646-1134665 | None:intergenic | 30.0% | |
GATCTTTCATGATTCATTCT+TGG | - | chr7.4:1133948-1133967 | MS.gene22694:intron | 30.0% | |
GTTAAAATGTAAGATACCTG+TGG | + | chr7.4:1133251-1133270 | None:intergenic | 30.0% | |
TACAAATGGCAAGAAAATAG+AGG | - | chr7.4:1134868-1134887 | MS.gene22694:intron | 30.0% | |
TCTCAACAATACTTGTAGTT+CGG | - | chr7.4:1134005-1134024 | MS.gene22694:CDS | 30.0% | |
! | AACAGAAACGACATTTTCTA+TGG | - | chr7.4:1134510-1134529 | MS.gene22694:intron | 30.0% |
! | AACATTTTGTCATGGTAAGT+AGG | + | chr7.4:1133812-1133831 | None:intergenic | 30.0% |
! | ATTCTTTGCTTCAAGTTATC+AGG | + | chr7.4:1134832-1134851 | None:intergenic | 30.0% |
! | ATTTGGAATCTACAACTGTT+AGG | - | chr7.4:1134746-1134765 | MS.gene22694:CDS | 30.0% |
! | GAAGGTATGAACAATACAAA+TGG | - | chr7.4:1134854-1134873 | MS.gene22694:intron | 30.0% |
! | GTCATATTTTACAGTTCTCT+TGG | - | chr7.4:1134296-1134315 | MS.gene22694:CDS | 30.0% |
! | GTGATCAAAACATTTTGTCA+TGG | + | chr7.4:1133820-1133839 | None:intergenic | 30.0% |
! | GTTGATAAGACGTCTAAATT+GGG | + | chr7.4:1135441-1135460 | None:intergenic | 30.0% |
! | TGTTGATAAGACGTCTAAAT+TGG | + | chr7.4:1135442-1135461 | None:intergenic | 30.0% |
! | TTTGGAATCTACAACTGTTA+GGG | - | chr7.4:1134747-1134766 | MS.gene22694:CDS | 30.0% |
! | TTTTACATTCCAGTGATTGT+CGG | - | chr7.4:1132993-1133012 | MS.gene22694:CDS | 30.0% |
!! | AACTCATTATTTCTAATGCC+TGG | - | chr7.4:1135272-1135291 | MS.gene22694:CDS | 30.0% |
!! | CAAAAATGTCTTGATTTGGA+TGG | - | chr7.4:1133020-1133039 | MS.gene22694:CDS | 30.0% |
!!! | AATCAGTGGTTTTGGATTTT+TGG | + | chr7.4:1134601-1134620 | None:intergenic | 30.0% |
!!! | ATCAGTGGTTTTGGATTTTT+GGG | + | chr7.4:1134600-1134619 | None:intergenic | 30.0% |
!!! | TGTTTTCAGTTAAGTTGGAA+GGG | - | chr7.4:1133450-1133469 | MS.gene22694:CDS | 30.0% |
!!! | TTGTTTTCAGTTAAGTTGGA+AGG | - | chr7.4:1133449-1133468 | MS.gene22694:CDS | 30.0% |
!!! | TTTCATTGCCATTTTTGGAT+TGG | - | chr7.4:1134367-1134386 | MS.gene22694:CDS | 30.0% |
AATGGCAATGAAAATCGCAA+AGG | + | chr7.4:1134360-1134379 | None:intergenic | 35.0% | |
ACTTGAAGCAAAGAATTCGA+AGG | - | chr7.4:1134836-1134855 | MS.gene22694:intron | 35.0% | |
AGCAACAAACTTCAAGTCAT+CGG | + | chr7.4:1135417-1135436 | None:intergenic | 35.0% | |
ATATGTCTCTTTGTCATTCC+AGG | - | chr7.4:1132664-1132683 | MS.gene22694:CDS | 35.0% | |
ATCAATTATTCCACTTCCAC+AGG | - | chr7.4:1133232-1133251 | MS.gene22694:CDS | 35.0% | |
ATCATCTTTCAGTTCAGAAC+CGG | - | chr7.4:1133104-1133123 | MS.gene22694:CDS | 35.0% | |
ATGCATATATTGTTGCACCA+AGG | + | chr7.4:1135714-1135733 | None:intergenic | 35.0% | |
ATTCCAAACTTGAAAAGCTC+GGG | - | chr7.4:1133574-1133593 | MS.gene22694:CDS | 35.0% | |
ATTGGAAGAAGATTTGTGAG+TGG | - | chr7.4:1132786-1132805 | MS.gene22694:CDS | 35.0% | |
CAAAGGGACTTAAATTTGTG+AGG | - | chr7.4:1132545-1132564 | MS.gene22694:CDS | 35.0% | |
CAAGACAACTACTTATGTCA+CGG | - | chr7.4:1134328-1134347 | MS.gene22694:CDS | 35.0% | |
GATGTAAAGGATCCATGTTA+TGG | - | chr7.4:1133353-1133372 | MS.gene22694:intron | 35.0% | |
GTGCAACAATATATGCATCA+AGG | - | chr7.4:1135716-1135735 | MS.gene22694:intron | 35.0% | |
TAGAGGATCAGAATGAGTAT+TGG | + | chr7.4:1133311-1133330 | None:intergenic | 35.0% | |
TGACATAAGTAGTTGTCTTG+AGG | + | chr7.4:1134328-1134347 | None:intergenic | 35.0% | |
TTACTTTGGCTACCATAACA+TGG | + | chr7.4:1133368-1133387 | None:intergenic | 35.0% | |
TTCAAAACAGCACTTACACT+TGG | + | chr7.4:1132762-1132781 | None:intergenic | 35.0% | |
TTGTCTGTCCTTCATTTACA+GGG | + | chr7.4:1132857-1132876 | None:intergenic | 35.0% | |
TTGTGTCCTTGATTTCATCA+GGG | + | chr7.4:1134035-1134054 | None:intergenic | 35.0% | |
TTTGTCTGTCCTTCATTTAC+AGG | + | chr7.4:1132858-1132877 | None:intergenic | 35.0% | |
TTTGTGTCCTTGATTTCATC+AGG | + | chr7.4:1134036-1134055 | None:intergenic | 35.0% | |
! | AGAAGTTCTTCTACTGCTTT+TGG | - | chr7.4:1134127-1134146 | MS.gene22694:intron | 35.0% |
! | GACACAAAGACCTTCAATTT+TGG | - | chr7.4:1134048-1134067 | MS.gene22694:CDS | 35.0% |
! | GATCACCAAATTCTTGTTTG+TGG | - | chr7.4:1133834-1133853 | MS.gene22694:intron | 35.0% |
! | GCATCCATTTTCTCAAACAT+TGG | + | chr7.4:1135095-1135114 | None:intergenic | 35.0% |
! | GTCATCTTTTAGTATAGAGC+AGG | - | chr7.4:1132707-1132726 | MS.gene22694:CDS | 35.0% |
! | TATCTTTTCATTATGGCGAC+AGG | + | chr7.4:1133182-1133201 | None:intergenic | 35.0% |
! | TCTACTGTTCTAGTTGAAGT+AGG | + | chr7.4:1135359-1135378 | None:intergenic | 35.0% |
! | TGCAGGTAAGTGCTATTAAT+AGG | - | chr7.4:1134417-1134436 | MS.gene22694:CDS | 35.0% |
!! | ATGAAAAGCATCTCATCAAC+TGG | + | chr7.4:1135197-1135216 | None:intergenic | 35.0% |
!! | ATGTCTCTTCTGAGATCTTT+AGG | + | chr7.4:1134925-1134944 | None:intergenic | 35.0% |
!! | TAAGCAAAAATGGACTGCAA+TGG | + | chr7.4:1134636-1134655 | None:intergenic | 35.0% |
!! | TGTCTCTTCTGAGATCTTTA+GGG | + | chr7.4:1134924-1134943 | None:intergenic | 35.0% |
!! | TGTTTTTGAGCAGTGAAATC+AGG | + | chr7.4:1135838-1135857 | None:intergenic | 35.0% |
!! | TTGTTCCATTTCTGAAGCAT+AGG | + | chr7.4:1132924-1132943 | None:intergenic | 35.0% |
!! | TTTTGTTTACCGACAATCAC+TGG | + | chr7.4:1133005-1133024 | None:intergenic | 35.0% |
!!! | AGTGCTGTTTTGAACAGTAT+TGG | - | chr7.4:1132768-1132787 | MS.gene22694:CDS | 35.0% |
!!! | GCGATTTTCATTGCCATTTT+TGG | - | chr7.4:1134362-1134381 | MS.gene22694:CDS | 35.0% |
!!! | TCAGTGGTTTTGGATTTTTG+GGG | + | chr7.4:1134599-1134618 | None:intergenic | 35.0% |
!!! | TTGCATCCCAGTTTTTTCAA+TGG | - | chr7.4:1134235-1134254 | MS.gene22694:CDS | 35.0% |
AAAAGAGGTAGTAGTCTCTG+CGG | + | chr7.4:1135796-1135815 | None:intergenic | 40.0% | |
AACAACTCCAACACACTTTC+AGG | - | chr7.4:1135465-1135484 | MS.gene22694:CDS | 40.0% | |
AAGCAGTAGAAGAACTTCTG+AGG | + | chr7.4:1134126-1134145 | None:intergenic | 40.0% | |
ACAAGATGCTTTGGCAAATG+AGG | - | chr7.4:1135672-1135691 | MS.gene22694:CDS | 40.0% | |
ACATGGATCCTTTACATCCA+TGG | + | chr7.4:1133351-1133370 | None:intergenic | 40.0% | |
AGACAAGCTACAAGATGCTT+TGG | - | chr7.4:1135663-1135682 | MS.gene22694:CDS | 40.0% | |
AGCTAACTGGTATCTGCTTT+CGG | - | chr7.4:1133879-1133898 | MS.gene22694:intron | 40.0% | |
AGTTGAAGTAGGTAGATTCG+AGG | + | chr7.4:1135348-1135367 | None:intergenic | 40.0% | |
ATGGTTCACCCTGTAAATGA+AGG | - | chr7.4:1132846-1132865 | MS.gene22694:intron | 40.0% | |
ATGTAAGATACCTGTGGAAG+TGG | + | chr7.4:1133245-1133264 | None:intergenic | 40.0% | |
ATTCAGAAGACCCTCTTCAA+TGG | - | chr7.4:1132827-1132846 | MS.gene22694:intron | 40.0% | |
CACAGCCACAAACAAGAATT+TGG | + | chr7.4:1133842-1133861 | None:intergenic | 40.0% | |
CATATTGACAGAGACAGCAT+GGG | - | chr7.4:1133702-1133721 | MS.gene22694:intron | 40.0% | |
CGCAAAATTCTTGATCCACA+GGG | - | chr7.4:1132897-1132916 | MS.gene22694:intron | 40.0% | |
CTCTTCTCTGTATACAGAAC+TGG | + | chr7.4:1135152-1135171 | None:intergenic | 40.0% | |
CTTCCAAAAACACGAGAAGA+AGG | + | chr7.4:1133140-1133159 | None:intergenic | 40.0% | |
CTTTGTAATCACATGTGTGC+TGG | - | chr7.4:1132947-1132966 | MS.gene22694:CDS | 40.0% | |
GAAAATGGATGCGCAATTGT+TGG | - | chr7.4:1135103-1135122 | MS.gene22694:intron | 40.0% | |
GAAGGATCAACTATAAGCCT+TGG | - | chr7.4:1135694-1135713 | MS.gene22694:CDS | 40.0% | |
GCAAAATTCTTGATCCACAG+GGG | - | chr7.4:1132898-1132917 | MS.gene22694:intron | 40.0% | |
GGACTTAAATTTGTGAGGTG+AGG | - | chr7.4:1132550-1132569 | MS.gene22694:CDS | 40.0% | |
GGTGCCAATGTTTGAGAAAA+TGG | - | chr7.4:1135088-1135107 | MS.gene22694:intron | 40.0% | |
TGAAGGACAGACAAAGAAGT+TGG | - | chr7.4:1132863-1132882 | MS.gene22694:intron | 40.0% | |
TGATCTCCAATCATCAAACC+TGG | + | chr7.4:1132685-1132704 | None:intergenic | 40.0% | |
! | ACAACAAATGGTGGAAGAAC+TGG | - | chr7.4:1135242-1135261 | MS.gene22694:CDS | 40.0% |
! | AGAAGAAGGCGCAATAAATC+CGG | + | chr7.4:1133126-1133145 | None:intergenic | 40.0% |
! | AGTTGAAGCATTTGCACTCA+AGG | - | chr7.4:1135391-1135410 | MS.gene22694:CDS | 40.0% |
! | CAAATTCTTGTTTGTGGCTG+TGG | - | chr7.4:1133840-1133859 | MS.gene22694:intron | 40.0% |
! | CATGATTCATTCTTGGGTTG+TGG | - | chr7.4:1133955-1133974 | MS.gene22694:intron | 40.0% |
! | CGACATTTTCTATGGACAGT+TGG | - | chr7.4:1134518-1134537 | MS.gene22694:intron | 40.0% |
! | CTAATGCCTGGTGATTTTTG+TGG | - | chr7.4:1135284-1135303 | MS.gene22694:CDS | 40.0% |
! | GAACTTCTGAGGAAAATCTG+TGG | + | chr7.4:1134115-1134134 | None:intergenic | 40.0% |
! | GAGATGCTTTTCATTATGCG+AGG | - | chr7.4:1135203-1135222 | MS.gene22694:CDS | 40.0% |
! | GGGTTTGCGAAATTTAAGGT+TGG | - | chr7.4:1134152-1134171 | MS.gene22694:intron | 40.0% |
! | GTCATTCCAGGTTTGATGAT+TGG | - | chr7.4:1132676-1132695 | MS.gene22694:CDS | 40.0% |
! | TAGTGTGGAATCAGTGGTTT+TGG | + | chr7.4:1134609-1134628 | None:intergenic | 40.0% |
! | TGGAGAGGAGCTTTTAACAT+GGG | - | chr7.4:1135304-1135323 | MS.gene22694:CDS | 40.0% |
!! | AGTTCTTCTACTGCTTTTGG+TGG | - | chr7.4:1134130-1134149 | MS.gene22694:intron | 40.0% |
!! | GTTCTTCTACTGCTTTTGGT+GGG | - | chr7.4:1134131-1134150 | MS.gene22694:intron | 40.0% |
!! | TCTTCCACCATTTGTTGTCA+TGG | + | chr7.4:1135240-1135259 | None:intergenic | 40.0% |
!! | TTCTTCTACTGCTTTTGGTG+GGG | - | chr7.4:1134132-1134151 | MS.gene22694:intron | 40.0% |
!!! | TCTTCTCGTGTTTTTGGAAG+AGG | - | chr7.4:1133140-1133159 | MS.gene22694:CDS | 40.0% |
AAGAGATGAGAGTGAAGAGG+AGG | - | chr7.4:1134773-1134792 | MS.gene22694:CDS | 45.0% | |
ACAGGGTGAACCATTGAAGA+GGG | + | chr7.4:1132840-1132859 | None:intergenic | 45.0% | |
AGAGATGAGAGTGAAGAGGA+GGG | - | chr7.4:1134774-1134793 | MS.gene22694:CDS | 45.0% | |
AGGAAGAGATGAGAGTGAAG+AGG | - | chr7.4:1134770-1134789 | MS.gene22694:CDS | 45.0% | |
CGATGCTCTACAATCACTTG+TGG | - | chr7.4:1134080-1134099 | MS.gene22694:intron | 45.0% | |
CGTGTTTCATACAAGCAGCT+TGG | - | chr7.4:1135593-1135612 | MS.gene22694:CDS | 45.0% | |
CTTTACATCCATGGAGAGAG+CGG | + | chr7.4:1133342-1133361 | None:intergenic | 45.0% | |
GACTGCAATGGAAGTTAGTG+TGG | + | chr7.4:1134624-1134643 | None:intergenic | 45.0% | |
GATGCTTTGGCAAATGAGGA+AGG | - | chr7.4:1135676-1135695 | MS.gene22694:CDS | 45.0% | |
GCATATTGACAGAGACAGCA+TGG | - | chr7.4:1133701-1133720 | MS.gene22694:intron | 45.0% | |
GCGCAAAATTCTTGATCCAC+AGG | - | chr7.4:1132896-1132915 | MS.gene22694:intron | 45.0% | |
GCTACCATGACAACAAATGG+TGG | - | chr7.4:1135233-1135252 | MS.gene22694:CDS | 45.0% | |
GGAAGTTAGTGTGGAATCAG+TGG | + | chr7.4:1134615-1134634 | None:intergenic | 45.0% | |
GGAATCTACAACTGTTAGGG+AGG | - | chr7.4:1134750-1134769 | MS.gene22694:CDS | 45.0% | |
GGTGGGGTTTGCGAAATTTA+AGG | - | chr7.4:1134148-1134167 | MS.gene22694:intron | 45.0% | |
GGTTGACCCTGATGAAATCA+AGG | - | chr7.4:1134026-1134045 | MS.gene22694:CDS | 45.0% | |
GTCGCTACCATGACAACAAA+TGG | - | chr7.4:1135230-1135249 | MS.gene22694:CDS | 45.0% | |
TACAGGGTGAACCATTGAAG+AGG | + | chr7.4:1132841-1132860 | None:intergenic | 45.0% | |
TCCTCTCCACAAAAATCACC+AGG | + | chr7.4:1135293-1135312 | None:intergenic | 45.0% | |
TCTGCTTTCGGTAGAATCAC+AGG | - | chr7.4:1133891-1133910 | MS.gene22694:intron | 45.0% | |
TGAAGTAGGTAGATTCGAGG+AGG | + | chr7.4:1135345-1135364 | None:intergenic | 45.0% | |
TTTCGGTAGAATCACAGGTG+CGG | - | chr7.4:1133896-1133915 | MS.gene22694:intron | 45.0% | |
! | AGCCATACCTGAAAGTGTGT+TGG | + | chr7.4:1135475-1135494 | None:intergenic | 45.0% |
! | ATGTGTGCTGGCAATTTCTG+TGG | - | chr7.4:1132959-1132978 | MS.gene22694:CDS | 45.0% |
! | CTCCAACACACTTTCAGGTA+TGG | - | chr7.4:1135470-1135489 | MS.gene22694:CDS | 45.0% |
! | GGAGCTTTTAACATGGGCTT+TGG | - | chr7.4:1135310-1135329 | MS.gene22694:CDS | 45.0% |
! | GTGGAGAGGAGCTTTTAACA+TGG | - | chr7.4:1135303-1135322 | MS.gene22694:CDS | 45.0% |
!! | CATGACTTGCTAGCATGTAG+AGG | + | chr7.4:1133750-1133769 | None:intergenic | 45.0% |
!! | CTCTTCTGAGATCTTTAGGG+AGG | + | chr7.4:1134921-1134940 | None:intergenic | 45.0% |
!!! | CTCGGGTCCATTTTTAGCAA+AGG | - | chr7.4:1133591-1133610 | MS.gene22694:CDS | 45.0% |
AGGGGCCTATGCTTCAGAAA+TGG | - | chr7.4:1132916-1132935 | MS.gene22694:CDS | 50.0% | |
ATCAGGTGGTTGGAGCTAAC+TGG | - | chr7.4:1133866-1133885 | MS.gene22694:intron | 50.0% | |
ATTCGCCGCAATGGAAGACA+TGG | - | chr7.4:1135566-1135585 | MS.gene22694:CDS | 50.0% | |
CGCTCTCTCCATGGATGTAA+AGG | - | chr7.4:1133340-1133359 | MS.gene22694:intron | 50.0% | |
GAAGGTCATATTCGCCGCAA+TGG | - | chr7.4:1135557-1135576 | MS.gene22694:CDS | 50.0% | |
GGACGAATTCGCAGTAGTCT+TGG | + | chr7.4:1133652-1133671 | None:intergenic | 50.0% | |
GGTAGATTCGAGGAGGAGTT+TGG | + | chr7.4:1135338-1135357 | None:intergenic | 50.0% | |
GTTTGTGGCTGTGGCATATC+AGG | - | chr7.4:1133849-1133868 | MS.gene22694:intron | 50.0% | |
TAGAATCACAGGTGCGGTGT+TGG | - | chr7.4:1133902-1133921 | MS.gene22694:intron | 50.0% | |
TTCGCCGCAATGGAAGACAT+GGG | - | chr7.4:1135567-1135586 | MS.gene22694:CDS | 50.0% | |
! | AAATCAGGCTCAGCTGGCTT+TGG | + | chr7.4:1135823-1135842 | None:intergenic | 50.0% |
! | GCCTGGTGATTTTTGTGGAG+AGG | - | chr7.4:1135289-1135308 | MS.gene22694:CDS | 50.0% |
! | GCGCCTTCTTCTCGTGTTTT+TGG | - | chr7.4:1133134-1133153 | MS.gene22694:CDS | 50.0% |
!!! | GGACCCGAGCTTTTCAAGTT+TGG | + | chr7.4:1133580-1133599 | None:intergenic | 50.0% |
AGAGAGCGGCAAGGTTGTAG+AGG | + | chr7.4:1133328-1133347 | None:intergenic | 55.0% | |
AGAGGAGGGATGCAGAACGA+TGG | - | chr7.4:1134788-1134807 | MS.gene22694:CDS | 55.0% | |
GCACCCCATGTCTTCCATTG+CGG | + | chr7.4:1135574-1135593 | None:intergenic | 55.0% | |
GCAGTGAAATCAGGCTCAGC+TGG | + | chr7.4:1135829-1135848 | None:intergenic | 55.0% | |
GCTGTGGCATATCAGGTGGT+TGG | - | chr7.4:1133856-1133875 | MS.gene22694:intron | 55.0% | |
TCGCCGCAATGGAAGACATG+GGG | - | chr7.4:1135568-1135587 | MS.gene22694:CDS | 55.0% | |
TGTGGCTGTGGCATATCAGG+TGG | - | chr7.4:1133852-1133871 | MS.gene22694:intron | 55.0% | |
TTGACAGAGACAGCATGGGC+TGG | - | chr7.4:1133706-1133725 | MS.gene22694:intron | 55.0% | |
!! | GCTGGCTTTGGAGGCAAAAG+AGG | + | chr7.4:1135811-1135830 | None:intergenic | 55.0% |
!! | TTCTGAAGCATAGGCCCCTG+TGG | + | chr7.4:1132915-1132934 | None:intergenic | 55.0% |
CAACCTTGCCGCTCTCTCCA+TGG | - | chr7.4:1133331-1133350 | MS.gene22694:intron | 60.0% | |
CATCCATGGAGAGAGCGGCA+AGG | + | chr7.4:1133337-1133356 | None:intergenic | 60.0% | |
!! | TCAGGCTCAGCTGGCTTTGG+AGG | + | chr7.4:1135820-1135839 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 1132538 | 1135861 | 1132538 | ID=MS.gene22694 |
chr7.4 | mRNA | 1132538 | 1135861 | 1132538 | ID=MS.gene22694.t1;Parent=MS.gene22694 |
chr7.4 | exon | 1135833 | 1135861 | 1135833 | ID=MS.gene22694.t1.exon1;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1135833 | 1135861 | 1135833 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1135146 | 1135713 | 1135146 | ID=MS.gene22694.t1.exon2;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1135146 | 1135713 | 1135146 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1134631 | 1134843 | 1134631 | ID=MS.gene22694.t1.exon3;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1134631 | 1134843 | 1134631 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1134230 | 1134528 | 1134230 | ID=MS.gene22694.t1.exon4;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1134230 | 1134528 | 1134230 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1133978 | 1134089 | 1133978 | ID=MS.gene22694.t1.exon5;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1133978 | 1134089 | 1133978 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1133421 | 1133657 | 1133421 | ID=MS.gene22694.t1.exon6;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1133421 | 1133657 | 1133421 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1132913 | 1133310 | 1132913 | ID=MS.gene22694.t1.exon7;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1132913 | 1133310 | 1132913 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
chr7.4 | exon | 1132538 | 1132838 | 1132538 | ID=MS.gene22694.t1.exon8;Parent=MS.gene22694.t1 |
chr7.4 | CDS | 1132538 | 1132838 | 1132538 | ID=cds.MS.gene22694.t1;Parent=MS.gene22694.t1 |
Gene Sequence |
Protein sequence |