Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22765.t1 | XP_013450635.1 | 97.6 | 289 | 5 | 2 | 1 | 287 | 1 | 289 | 7.10E-64 | 254.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22765.t1 | Q8L9T5 | 61.8 | 68 | 26 | 0 | 76 | 143 | 95 | 162 | 3.2e-20 | 100.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22765.t1 | A0A072U680 | 97.6 | 289 | 5 | 2 | 1 | 287 | 1 | 289 | 5.1e-64 | 254.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056408 | MS.gene22765 | 0.816176 | 6.33E-52 | -1.69E-46 |
MS.gene060808 | MS.gene22765 | 0.819214 | 1.31E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22765.t1 | MTR_7g117540 | 95.848 | 289 | 10 | 2 | 1 | 287 | 1 | 289 | 0.0 | 557 |
MS.gene22765.t1 | MTR_8g023400 | 39.936 | 313 | 138 | 9 | 10 | 279 | 15 | 320 | 2.35e-54 | 179 |
MS.gene22765.t1 | MTR_2g436100 | 33.083 | 266 | 137 | 7 | 14 | 264 | 23 | 262 | 5.27e-31 | 117 |
MS.gene22765.t1 | MTR_4g120270 | 65.333 | 75 | 25 | 1 | 75 | 149 | 80 | 153 | 1.37e-27 | 108 |
MS.gene22765.t1 | MTR_1g082550 | 34.667 | 150 | 89 | 3 | 6 | 149 | 30 | 176 | 3.86e-23 | 97.8 |
MS.gene22765.t1 | MTR_3g071300 | 32.051 | 156 | 92 | 5 | 2 | 149 | 6 | 155 | 2.33e-22 | 91.7 |
MS.gene22765.t1 | MTR_3g094000 | 35.156 | 128 | 77 | 2 | 25 | 149 | 44 | 168 | 2.59e-22 | 91.7 |
MS.gene22765.t1 | MTR_6g087150 | 37.126 | 167 | 86 | 5 | 24 | 172 | 41 | 206 | 2.97e-22 | 95.5 |
MS.gene22765.t1 | MTR_1g043410 | 34.783 | 138 | 74 | 4 | 27 | 148 | 34 | 171 | 8.93e-22 | 93.2 |
MS.gene22765.t1 | MTR_5g026730 | 35.878 | 131 | 75 | 3 | 27 | 149 | 14 | 143 | 2.06e-21 | 89.4 |
MS.gene22765.t1 | MTR_7g113800 | 37.984 | 129 | 65 | 4 | 33 | 149 | 44 | 169 | 2.08e-21 | 92.8 |
MS.gene22765.t1 | MTR_3g464780 | 48.276 | 87 | 40 | 1 | 75 | 156 | 102 | 188 | 2.95e-21 | 90.9 |
MS.gene22765.t1 | MTR_5g064990 | 32.394 | 142 | 64 | 4 | 23 | 146 | 62 | 189 | 6.73e-21 | 91.7 |
MS.gene22765.t1 | MTR_7g073200 | 32.768 | 177 | 103 | 4 | 1 | 176 | 10 | 171 | 7.83e-21 | 87.8 |
MS.gene22765.t1 | MTR_5g024730 | 35.433 | 127 | 73 | 2 | 25 | 148 | 33 | 153 | 2.88e-20 | 87.0 |
MS.gene22765.t1 | MTR_1g074190 | 41.584 | 101 | 46 | 2 | 61 | 148 | 79 | 179 | 4.28e-20 | 89.0 |
MS.gene22765.t1 | MTR_8g092960 | 46.591 | 88 | 36 | 2 | 75 | 151 | 103 | 190 | 6.95e-20 | 86.3 |
MS.gene22765.t1 | MTR_3g110190 | 39.062 | 128 | 72 | 3 | 26 | 148 | 14 | 140 | 8.87e-20 | 88.2 |
MS.gene22765.t1 | MTR_8g092840 | 46.591 | 88 | 36 | 2 | 75 | 151 | 113 | 200 | 9.75e-20 | 85.9 |
MS.gene22765.t1 | MTR_3g100400 | 44.565 | 92 | 42 | 3 | 71 | 159 | 126 | 211 | 1.53e-19 | 88.2 |
MS.gene22765.t1 | MTR_4g106680 | 27.907 | 215 | 127 | 6 | 23 | 213 | 39 | 249 | 1.66e-19 | 87.0 |
MS.gene22765.t1 | MTR_2g090950 | 43.902 | 82 | 39 | 1 | 75 | 149 | 91 | 172 | 2.14e-19 | 85.1 |
MS.gene22765.t1 | MTR_4g129420 | 36.496 | 137 | 74 | 4 | 41 | 165 | 78 | 213 | 2.47e-19 | 88.2 |
MS.gene22765.t1 | MTR_3g078450 | 38.261 | 115 | 67 | 2 | 35 | 145 | 35 | 149 | 3.38e-19 | 84.3 |
MS.gene22765.t1 | MTR_8g092930 | 48.684 | 76 | 37 | 1 | 75 | 148 | 112 | 187 | 4.12e-19 | 84.3 |
MS.gene22765.t1 | MTR_8g092985 | 48.684 | 76 | 37 | 1 | 75 | 148 | 111 | 186 | 4.58e-19 | 84.0 |
MS.gene22765.t1 | MTR_8g073120 | 33.600 | 125 | 74 | 2 | 25 | 146 | 26 | 144 | 4.63e-19 | 83.6 |
MS.gene22765.t1 | MTR_5g034790 | 34.756 | 164 | 78 | 7 | 7 | 147 | 32 | 189 | 5.38e-19 | 86.3 |
MS.gene22765.t1 | MTR_8g093010 | 31.788 | 151 | 92 | 3 | 2 | 148 | 39 | 182 | 6.56e-19 | 83.6 |
MS.gene22765.t1 | MTR_6g007737 | 38.732 | 142 | 71 | 6 | 15 | 145 | 68 | 204 | 1.31e-18 | 85.1 |
MS.gene22765.t1 | MTR_3g095560 | 39.450 | 109 | 47 | 1 | 92 | 181 | 128 | 236 | 1.57e-18 | 82.8 |
MS.gene22765.t1 | MTR_2g096350 | 45.333 | 75 | 38 | 1 | 72 | 143 | 104 | 178 | 1.71e-18 | 82.4 |
MS.gene22765.t1 | MTR_5g071930 | 48.611 | 72 | 35 | 1 | 75 | 146 | 66 | 135 | 2.16e-18 | 81.6 |
MS.gene22765.t1 | MTR_4g093830 | 31.884 | 138 | 78 | 2 | 28 | 149 | 64 | 201 | 2.72e-18 | 84.0 |
MS.gene22765.t1 | MTR_5g030010 | 42.857 | 105 | 45 | 4 | 75 | 177 | 122 | 213 | 3.10e-18 | 84.0 |
MS.gene22765.t1 | MTR_3g091620 | 33.333 | 144 | 75 | 4 | 75 | 217 | 101 | 224 | 3.19e-18 | 84.0 |
MS.gene22765.t1 | MTR_3g086700 | 28.472 | 144 | 93 | 2 | 24 | 163 | 1 | 138 | 3.52e-18 | 80.9 |
MS.gene22765.t1 | MTR_3g078470 | 34.921 | 126 | 75 | 3 | 27 | 145 | 24 | 149 | 4.81e-18 | 81.3 |
MS.gene22765.t1 | MTR_4g022410 | 34.074 | 135 | 84 | 3 | 13 | 147 | 31 | 160 | 4.83e-18 | 80.5 |
MS.gene22765.t1 | MTR_5g082940 | 38.095 | 105 | 61 | 2 | 44 | 145 | 45 | 148 | 5.66e-18 | 79.7 |
MS.gene22765.t1 | MTR_2g009310 | 44.444 | 81 | 44 | 1 | 75 | 154 | 135 | 215 | 7.04e-18 | 83.2 |
MS.gene22765.t1 | MTR_5g026720 | 32.061 | 131 | 80 | 3 | 25 | 149 | 15 | 142 | 7.57e-18 | 79.3 |
MS.gene22765.t1 | MTR_8g089880 | 43.820 | 89 | 49 | 1 | 75 | 162 | 127 | 215 | 8.60e-18 | 81.6 |
MS.gene22765.t1 | MTR_5g064890 | 47.297 | 74 | 38 | 1 | 75 | 147 | 128 | 201 | 8.60e-18 | 82.4 |
MS.gene22765.t1 | MTR_2g090905 | 44.156 | 77 | 36 | 1 | 76 | 145 | 40 | 116 | 9.70e-18 | 77.8 |
MS.gene22765.t1 | MTR_5g076990 | 33.846 | 130 | 79 | 3 | 26 | 149 | 27 | 155 | 9.75e-18 | 82.0 |
MS.gene22765.t1 | MTR_3g099650 | 32.353 | 136 | 76 | 4 | 23 | 149 | 57 | 185 | 1.20e-17 | 82.4 |
MS.gene22765.t1 | MTR_1g100737 | 44.156 | 77 | 37 | 1 | 75 | 145 | 92 | 168 | 1.30e-17 | 79.3 |
MS.gene22765.t1 | MTR_3g116000 | 31.618 | 136 | 83 | 3 | 25 | 151 | 29 | 163 | 1.44e-17 | 79.3 |
MS.gene22765.t1 | MTR_6g055030 | 30.270 | 185 | 94 | 5 | 15 | 195 | 48 | 201 | 1.63e-17 | 81.3 |
MS.gene22765.t1 | MTR_8g066740 | 32.824 | 131 | 79 | 4 | 26 | 149 | 27 | 155 | 1.69e-17 | 81.3 |
MS.gene22765.t1 | MTR_8g092970 | 58.491 | 53 | 22 | 0 | 96 | 148 | 127 | 179 | 1.73e-17 | 79.7 |
MS.gene22765.t1 | MTR_3g086730 | 28.472 | 144 | 93 | 2 | 24 | 163 | 1 | 138 | 1.74e-17 | 80.1 |
MS.gene22765.t1 | MTR_4g063070 | 50.685 | 73 | 33 | 2 | 73 | 142 | 306 | 378 | 2.28e-17 | 81.6 |
MS.gene22765.t1 | MTR_8g092990 | 58.491 | 53 | 22 | 0 | 96 | 148 | 137 | 189 | 2.56e-17 | 79.3 |
MS.gene22765.t1 | MTR_2g035800 | 43.902 | 82 | 40 | 2 | 65 | 145 | 71 | 147 | 2.66e-17 | 77.8 |
MS.gene22765.t1 | MTR_2g041200 | 57.143 | 56 | 24 | 0 | 91 | 146 | 100 | 155 | 3.04e-17 | 78.2 |
MS.gene22765.t1 | MTR_1g090480 | 29.221 | 154 | 95 | 4 | 17 | 163 | 19 | 165 | 3.30e-17 | 77.8 |
MS.gene22765.t1 | MTR_5g066250 | 45.946 | 74 | 35 | 2 | 75 | 145 | 134 | 205 | 4.04e-17 | 81.3 |
MS.gene22765.t1 | MTR_2g055790 | 43.421 | 76 | 41 | 1 | 75 | 150 | 77 | 150 | 4.27e-17 | 78.2 |
MS.gene22765.t1 | MTR_8g063660 | 47.945 | 73 | 35 | 2 | 75 | 145 | 68 | 139 | 4.37e-17 | 80.5 |
MS.gene22765.t1 | MTR_4g030070 | 40.741 | 81 | 48 | 0 | 75 | 155 | 85 | 165 | 5.36e-17 | 78.6 |
MS.gene22765.t1 | MTR_5g064980 | 33.083 | 133 | 70 | 4 | 33 | 149 | 57 | 186 | 7.99e-17 | 80.1 |
MS.gene22765.t1 | MTR_8g066780 | 32.026 | 153 | 88 | 4 | 24 | 162 | 58 | 208 | 1.36e-16 | 79.3 |
MS.gene22765.t1 | MTR_7g116220 | 39.744 | 78 | 43 | 1 | 73 | 146 | 68 | 145 | 1.44e-16 | 76.3 |
MS.gene22765.t1 | MTR_1g070140 | 28.571 | 161 | 102 | 3 | 16 | 163 | 33 | 193 | 2.26e-16 | 78.6 |
MS.gene22765.t1 | MTR_7g108855 | 52.857 | 70 | 30 | 2 | 76 | 142 | 67 | 136 | 2.73e-16 | 75.9 |
MS.gene22765.t1 | MTR_7g116200 | 46.377 | 69 | 37 | 0 | 75 | 143 | 68 | 136 | 4.38e-16 | 74.7 |
MS.gene22765.t1 | MTR_8g009190 | 34.532 | 139 | 81 | 3 | 15 | 145 | 14 | 150 | 8.35e-16 | 76.6 |
MS.gene22765.t1 | MTR_7g076250 | 39.726 | 73 | 42 | 1 | 75 | 145 | 63 | 135 | 1.41e-15 | 73.9 |
MS.gene22765.t1 | MTR_7g116180 | 42.667 | 75 | 39 | 1 | 75 | 145 | 67 | 141 | 2.48e-15 | 72.8 |
MS.gene22765.t1 | MTR_5g022920 | 53.571 | 56 | 26 | 0 | 90 | 145 | 179 | 234 | 3.61e-15 | 73.6 |
MS.gene22765.t1 | MTR_1g070425 | 42.667 | 75 | 39 | 1 | 75 | 145 | 68 | 142 | 3.68e-15 | 72.4 |
MS.gene22765.t1 | MTR_4g056590 | 41.096 | 73 | 41 | 1 | 75 | 147 | 100 | 170 | 3.82e-15 | 72.8 |
MS.gene22765.t1 | MTR_3g114500 | 32.773 | 119 | 73 | 2 | 27 | 145 | 5 | 116 | 4.78e-15 | 70.5 |
MS.gene22765.t1 | MTR_7g116210 | 44.928 | 69 | 38 | 0 | 75 | 143 | 10 | 78 | 5.38e-15 | 70.1 |
MS.gene22765.t1 | MTR_1g056350 | 36.667 | 90 | 53 | 1 | 75 | 160 | 74 | 163 | 2.47e-14 | 69.7 |
MS.gene22765.t1 | MTR_3g081030 | 39.130 | 92 | 54 | 1 | 59 | 148 | 76 | 167 | 3.36e-14 | 70.5 |
MS.gene22765.t1 | MTR_4g094725 | 43.662 | 71 | 37 | 1 | 75 | 142 | 78 | 148 | 3.82e-14 | 68.9 |
MS.gene22765.t1 | MTR_6g007680 | 31.667 | 120 | 71 | 3 | 29 | 147 | 4 | 113 | 6.61e-14 | 68.2 |
MS.gene22765.t1 | MTR_8g028465 | 34.314 | 102 | 66 | 1 | 75 | 176 | 90 | 190 | 8.92e-14 | 68.9 |
MS.gene22765.t1 | MTR_7g096690 | 22.845 | 232 | 157 | 8 | 24 | 235 | 10 | 239 | 1.03e-13 | 70.5 |
MS.gene22765.t1 | MTR_8g032690 | 54.348 | 46 | 21 | 0 | 100 | 145 | 19 | 64 | 1.06e-13 | 66.6 |
MS.gene22765.t1 | MTR_8g074900 | 47.887 | 71 | 34 | 1 | 75 | 145 | 158 | 225 | 1.57e-13 | 68.9 |
MS.gene22765.t1 | MTR_1g090460 | 43.836 | 73 | 36 | 1 | 82 | 149 | 72 | 144 | 1.60e-13 | 67.4 |
MS.gene22765.t1 | MTR_8g071815 | 48.438 | 64 | 31 | 1 | 100 | 163 | 90 | 151 | 1.97e-13 | 67.8 |
MS.gene22765.t1 | MTR_3g012550 | 29.193 | 161 | 96 | 5 | 22 | 172 | 22 | 174 | 2.21e-13 | 67.4 |
MS.gene22765.t1 | MTR_1g026070 | 40.541 | 74 | 42 | 1 | 75 | 148 | 48 | 119 | 5.24e-13 | 65.1 |
MS.gene22765.t1 | MTR_7g079290 | 38.158 | 76 | 42 | 1 | 75 | 145 | 125 | 200 | 9.49e-13 | 66.2 |
MS.gene22765.t1 | MTR_3g087900 | 54.237 | 59 | 21 | 3 | 99 | 156 | 68 | 121 | 1.45e-12 | 64.7 |
MS.gene22765.t1 | MTR_1g492830 | 36.986 | 73 | 44 | 1 | 75 | 145 | 61 | 133 | 1.47e-12 | 65.9 |
MS.gene22765.t1 | MTR_7g059360 | 53.191 | 47 | 22 | 0 | 99 | 145 | 157 | 203 | 1.58e-12 | 66.2 |
MS.gene22765.t1 | MTR_5g092790 | 41.892 | 74 | 40 | 2 | 75 | 145 | 157 | 230 | 2.11e-12 | 65.9 |
MS.gene22765.t1 | MTR_3g078120 | 30.645 | 124 | 81 | 3 | 25 | 143 | 5 | 128 | 2.64e-12 | 63.9 |
MS.gene22765.t1 | MTR_4g077570 | 45.763 | 59 | 26 | 3 | 91 | 146 | 4 | 59 | 2.71e-12 | 61.6 |
MS.gene22765.t1 | MTR_5g092750 | 42.667 | 75 | 40 | 2 | 75 | 146 | 157 | 231 | 3.30e-12 | 65.1 |
MS.gene22765.t1 | MTR_8g072020 | 41.558 | 77 | 37 | 4 | 80 | 151 | 384 | 457 | 4.11e-12 | 66.6 |
MS.gene22765.t1 | MTR_5g009200 | 45.070 | 71 | 36 | 2 | 75 | 142 | 322 | 392 | 4.20e-12 | 66.2 |
MS.gene22765.t1 | MTR_8g072020 | 41.558 | 77 | 37 | 4 | 80 | 151 | 423 | 496 | 4.66e-12 | 66.2 |
MS.gene22765.t1 | MTR_8g099495 | 52.174 | 46 | 22 | 0 | 97 | 142 | 344 | 389 | 4.71e-12 | 66.2 |
MS.gene22765.t1 | MTR_4g108830 | 38.235 | 68 | 42 | 0 | 75 | 142 | 121 | 188 | 4.89e-12 | 63.9 |
MS.gene22765.t1 | MTR_4g108830 | 38.235 | 68 | 42 | 0 | 75 | 142 | 149 | 216 | 5.06e-12 | 64.3 |
MS.gene22765.t1 | MTR_2g044570 | 48.000 | 50 | 26 | 0 | 99 | 148 | 82 | 131 | 5.65e-12 | 65.5 |
MS.gene22765.t1 | MTR_7g079280 | 35.897 | 78 | 47 | 1 | 75 | 149 | 80 | 157 | 5.79e-12 | 63.5 |
MS.gene22765.t1 | MTR_5g009210 | 55.319 | 47 | 21 | 0 | 96 | 142 | 311 | 357 | 5.98e-12 | 65.9 |
MS.gene22765.t1 | MTR_5g009190 | 45.070 | 71 | 36 | 2 | 75 | 142 | 266 | 336 | 6.29e-12 | 65.5 |
MS.gene22765.t1 | MTR_6g055030 | 33.613 | 119 | 56 | 3 | 80 | 195 | 72 | 170 | 6.48e-12 | 65.1 |
MS.gene22765.t1 | MTR_8g019710 | 48.148 | 54 | 28 | 0 | 99 | 152 | 53 | 106 | 1.08e-11 | 61.6 |
MS.gene22765.t1 | MTR_5g066700 | 54.902 | 51 | 19 | 3 | 97 | 145 | 56 | 104 | 1.27e-11 | 61.6 |
MS.gene22765.t1 | MTR_5g066690 | 54.902 | 51 | 19 | 3 | 97 | 145 | 56 | 104 | 1.31e-11 | 61.6 |
MS.gene22765.t1 | MTR_1g050382 | 48.387 | 62 | 24 | 4 | 97 | 156 | 16 | 71 | 1.73e-11 | 62.8 |
MS.gene22765.t1 | MTR_4g064550 | 48.276 | 58 | 27 | 2 | 90 | 147 | 207 | 261 | 1.99e-11 | 63.5 |
MS.gene22765.t1 | MTR_4g064560 | 48.276 | 58 | 27 | 2 | 90 | 147 | 201 | 255 | 3.05e-11 | 62.8 |
MS.gene22765.t1 | MTR_7g078150 | 43.284 | 67 | 34 | 2 | 84 | 146 | 71 | 137 | 3.37e-11 | 61.2 |
MS.gene22765.t1 | MTR_8g099515 | 40.845 | 71 | 39 | 1 | 75 | 142 | 309 | 379 | 4.36e-11 | 63.2 |
MS.gene22765.t1 | MTR_3g078520 | 36.986 | 73 | 42 | 2 | 75 | 144 | 76 | 147 | 4.43e-11 | 60.8 |
MS.gene22765.t1 | MTR_1g047180 | 39.437 | 71 | 40 | 2 | 75 | 145 | 660 | 727 | 4.58e-11 | 63.5 |
MS.gene22765.t1 | MTR_2g079320 | 31.373 | 102 | 58 | 3 | 51 | 145 | 108 | 204 | 7.92e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22765.t1 | AT1G72310 | 32.248 | 307 | 156 | 8 | 1 | 260 | 1 | 302 | 2.71e-43 | 150 |
MS.gene22765.t1 | AT3G16720 | 33.444 | 302 | 144 | 9 | 8 | 277 | 14 | 290 | 2.98e-37 | 134 |
MS.gene22765.t1 | AT1G53820 | 32.517 | 286 | 136 | 8 | 22 | 256 | 22 | 301 | 4.78e-37 | 134 |
MS.gene22765.t1 | AT3G62690 | 35.102 | 245 | 135 | 7 | 20 | 254 | 24 | 254 | 1.25e-28 | 110 |
MS.gene22765.t1 | AT4G15975 | 58.333 | 72 | 30 | 0 | 74 | 145 | 50 | 121 | 2.77e-26 | 103 |
MS.gene22765.t1 | AT4G40070 | 43.548 | 124 | 61 | 3 | 32 | 147 | 49 | 171 | 5.04e-26 | 105 |
MS.gene22765.t1 | AT2G47560 | 41.429 | 140 | 75 | 3 | 20 | 155 | 24 | 160 | 1.46e-24 | 99.0 |
MS.gene22765.t1 | AT3G14320 | 55.556 | 72 | 32 | 0 | 71 | 142 | 59 | 130 | 5.58e-23 | 94.4 |
MS.gene22765.t1 | AT2G42360 | 29.091 | 220 | 140 | 6 | 7 | 222 | 13 | 220 | 2.94e-21 | 90.5 |
MS.gene22765.t1 | AT4G09110 | 32.727 | 165 | 93 | 5 | 3 | 162 | 34 | 185 | 4.96e-21 | 90.9 |
MS.gene22765.t1 | AT1G23980 | 33.750 | 160 | 82 | 5 | 9 | 145 | 31 | 189 | 8.13e-21 | 91.3 |
MS.gene22765.t1 | AT5G17600 | 37.903 | 124 | 71 | 2 | 67 | 184 | 108 | 231 | 1.39e-20 | 90.5 |
MS.gene22765.t1 | AT5G57750 | 32.353 | 170 | 92 | 6 | 25 | 172 | 31 | 199 | 1.65e-20 | 87.8 |
MS.gene22765.t1 | AT3G05200 | 33.333 | 126 | 80 | 1 | 25 | 146 | 49 | 174 | 2.73e-20 | 90.1 |
MS.gene22765.t1 | AT2G34990 | 33.094 | 139 | 84 | 4 | 17 | 149 | 32 | 167 | 2.81e-20 | 89.4 |
MS.gene22765.t1 | AT2G34990 | 33.094 | 139 | 84 | 4 | 17 | 149 | 10 | 145 | 2.82e-20 | 89.0 |
MS.gene22765.t1 | AT2G35000 | 34.351 | 131 | 77 | 3 | 25 | 146 | 51 | 181 | 2.89e-20 | 90.1 |
MS.gene22765.t1 | AT2G20030 | 36.765 | 136 | 69 | 4 | 16 | 142 | 39 | 166 | 4.95e-20 | 89.4 |
MS.gene22765.t1 | AT5G27420 | 33.333 | 144 | 87 | 2 | 28 | 167 | 53 | 191 | 6.67e-20 | 89.0 |
MS.gene22765.t1 | AT5G43420 | 39.316 | 117 | 44 | 3 | 65 | 154 | 78 | 194 | 7.02e-20 | 89.0 |
MS.gene22765.t1 | AT1G49220 | 33.333 | 132 | 85 | 2 | 19 | 148 | 53 | 183 | 7.62e-20 | 86.7 |
MS.gene22765.t1 | AT5G46650 | 31.126 | 151 | 89 | 4 | 25 | 160 | 25 | 175 | 8.57e-20 | 87.4 |
MS.gene22765.t1 | AT1G72220 | 33.793 | 145 | 85 | 4 | 12 | 146 | 80 | 223 | 1.83e-19 | 87.8 |
MS.gene22765.t1 | AT1G72200 | 33.333 | 147 | 80 | 5 | 25 | 160 | 63 | 202 | 2.30e-19 | 87.8 |
MS.gene22765.t1 | AT5G05280 | 32.558 | 129 | 84 | 1 | 25 | 153 | 41 | 166 | 2.96e-19 | 83.6 |
MS.gene22765.t1 | AT4G17905 | 36.585 | 123 | 71 | 3 | 74 | 191 | 126 | 246 | 2.99e-19 | 86.3 |
MS.gene22765.t1 | AT4G17905 | 36.585 | 123 | 71 | 3 | 74 | 191 | 152 | 272 | 3.76e-19 | 86.3 |
MS.gene22765.t1 | AT3G18773 | 32.576 | 132 | 87 | 1 | 19 | 148 | 47 | 178 | 3.92e-19 | 84.3 |
MS.gene22765.t1 | AT2G42350 | 33.758 | 157 | 83 | 3 | 7 | 150 | 2 | 150 | 4.82e-19 | 84.0 |
MS.gene22765.t1 | AT1G76410 | 32.800 | 125 | 82 | 1 | 26 | 148 | 28 | 152 | 4.88e-19 | 83.2 |
MS.gene22765.t1 | AT3G19140 | 34.884 | 129 | 74 | 3 | 33 | 153 | 14 | 140 | 7.63e-19 | 81.3 |
MS.gene22765.t1 | AT4G10150 | 32.258 | 155 | 87 | 3 | 31 | 169 | 32 | 184 | 8.34e-19 | 83.6 |
MS.gene22765.t1 | AT5G10380 | 50.633 | 79 | 37 | 2 | 75 | 151 | 109 | 187 | 1.24e-18 | 84.3 |
MS.gene22765.t1 | AT2G27940 | 35.878 | 131 | 72 | 3 | 24 | 143 | 54 | 183 | 1.27e-18 | 83.2 |
MS.gene22765.t1 | AT5G01880 | 48.611 | 72 | 36 | 1 | 75 | 145 | 79 | 150 | 1.98e-18 | 80.9 |
MS.gene22765.t1 | AT3G10910 | 33.333 | 132 | 82 | 2 | 25 | 150 | 33 | 164 | 2.06e-18 | 81.3 |
MS.gene22765.t1 | AT1G20823 | 35.211 | 142 | 80 | 4 | 15 | 145 | 16 | 156 | 2.09e-18 | 81.6 |
MS.gene22765.t1 | AT1G04360 | 40.777 | 103 | 42 | 3 | 64 | 147 | 79 | 181 | 2.49e-18 | 84.3 |
MS.gene22765.t1 | AT4G17920 | 26.389 | 216 | 136 | 6 | 24 | 218 | 25 | 238 | 2.59e-18 | 83.2 |
MS.gene22765.t1 | AT5G05810 | 48.000 | 75 | 34 | 2 | 71 | 142 | 116 | 188 | 2.92e-18 | 84.3 |
MS.gene22765.t1 | AT2G17450 | 31.783 | 129 | 71 | 2 | 25 | 145 | 28 | 147 | 4.15e-18 | 80.5 |
MS.gene22765.t1 | AT3G03550 | 47.126 | 87 | 39 | 3 | 76 | 160 | 134 | 215 | 5.34e-18 | 83.2 |
MS.gene22765.t1 | AT4G30400 | 42.424 | 99 | 50 | 2 | 75 | 166 | 107 | 205 | 7.62e-18 | 83.6 |
MS.gene22765.t1 | AT1G49200 | 30.303 | 132 | 89 | 2 | 19 | 148 | 54 | 184 | 8.08e-18 | 80.9 |
MS.gene22765.t1 | AT4G33565 | 50.000 | 74 | 34 | 2 | 75 | 146 | 191 | 263 | 8.84e-18 | 82.8 |
MS.gene22765.t1 | AT2G18650 | 37.410 | 139 | 70 | 6 | 41 | 164 | 59 | 195 | 1.12e-17 | 82.8 |
MS.gene22765.t1 | AT4G28890 | 52.174 | 69 | 32 | 1 | 75 | 142 | 97 | 165 | 1.49e-17 | 82.4 |
MS.gene22765.t1 | AT1G33480 | 36.066 | 122 | 69 | 2 | 31 | 145 | 26 | 145 | 1.59e-17 | 80.5 |
MS.gene22765.t1 | AT4G10160 | 38.614 | 101 | 54 | 2 | 75 | 169 | 72 | 170 | 2.14e-17 | 79.7 |
MS.gene22765.t1 | AT1G49210 | 31.061 | 132 | 88 | 2 | 19 | 148 | 53 | 183 | 2.25e-17 | 79.3 |
MS.gene22765.t1 | AT2G35420 | 30.405 | 148 | 93 | 3 | 7 | 145 | 2 | 148 | 3.96e-17 | 79.3 |
MS.gene22765.t1 | AT1G32361 | 43.243 | 74 | 41 | 1 | 72 | 145 | 127 | 199 | 6.97e-17 | 79.7 |
MS.gene22765.t1 | AT1G35330 | 33.333 | 141 | 66 | 5 | 26 | 149 | 49 | 178 | 9.37e-17 | 79.3 |
MS.gene22765.t1 | AT5G40250 | 35.099 | 151 | 74 | 5 | 15 | 145 | 42 | 188 | 9.40e-17 | 79.7 |
MS.gene22765.t1 | AT3G48030 | 42.105 | 76 | 42 | 1 | 75 | 148 | 180 | 255 | 1.42e-16 | 79.3 |
MS.gene22765.t1 | AT3G48030 | 42.105 | 76 | 42 | 1 | 75 | 148 | 102 | 177 | 1.51e-16 | 78.2 |
MS.gene22765.t1 | AT4G09120 | 35.294 | 136 | 69 | 5 | 62 | 192 | 88 | 209 | 1.88e-16 | 79.0 |
MS.gene22765.t1 | AT1G49230 | 57.407 | 54 | 23 | 0 | 95 | 148 | 126 | 179 | 2.46e-16 | 76.6 |
MS.gene22765.t1 | AT3G11110 | 32.867 | 143 | 90 | 4 | 5 | 145 | 14 | 152 | 3.62e-16 | 74.7 |
MS.gene22765.t1 | AT3G18930 | 42.683 | 82 | 36 | 2 | 75 | 145 | 120 | 201 | 6.14e-16 | 77.8 |
MS.gene22765.t1 | AT3G18930 | 42.683 | 82 | 36 | 2 | 75 | 145 | 120 | 201 | 6.14e-16 | 77.8 |
MS.gene22765.t1 | AT3G18930 | 42.683 | 82 | 36 | 2 | 75 | 145 | 120 | 201 | 6.14e-16 | 77.8 |
MS.gene22765.t1 | AT1G22500 | 44.304 | 79 | 40 | 2 | 75 | 149 | 89 | 167 | 1.27e-15 | 76.6 |
MS.gene22765.t1 | AT4G09100 | 40.789 | 76 | 41 | 2 | 75 | 146 | 56 | 131 | 3.84e-15 | 71.2 |
MS.gene22765.t1 | AT3G61550 | 37.500 | 88 | 43 | 1 | 74 | 149 | 98 | 185 | 5.59e-15 | 72.8 |
MS.gene22765.t1 | AT2G44578 | 29.545 | 132 | 72 | 2 | 26 | 157 | 17 | 127 | 6.51e-15 | 70.9 |
MS.gene22765.t1 | AT1G74410 | 37.363 | 91 | 56 | 1 | 53 | 142 | 128 | 218 | 1.02e-14 | 72.0 |
MS.gene22765.t1 | AT2G34000 | 33.600 | 125 | 64 | 4 | 25 | 142 | 21 | 133 | 3.10e-14 | 69.3 |
MS.gene22765.t1 | AT2G35910 | 38.298 | 94 | 55 | 2 | 75 | 166 | 121 | 213 | 3.14e-14 | 70.5 |
MS.gene22765.t1 | AT3G60966 | 50.000 | 58 | 29 | 0 | 100 | 157 | 62 | 119 | 3.34e-14 | 68.9 |
MS.gene22765.t1 | AT2G44581 | 29.600 | 125 | 67 | 2 | 26 | 150 | 17 | 120 | 3.68e-14 | 68.9 |
MS.gene22765.t1 | AT5G66070 | 58.696 | 46 | 19 | 0 | 100 | 145 | 176 | 221 | 5.23e-14 | 70.1 |
MS.gene22765.t1 | AT5G66070 | 58.696 | 46 | 19 | 0 | 100 | 145 | 176 | 221 | 5.23e-14 | 70.1 |
MS.gene22765.t1 | AT3G60220 | 47.297 | 74 | 35 | 2 | 79 | 148 | 92 | 165 | 5.72e-14 | 71.6 |
MS.gene22765.t1 | AT5G66070 | 58.696 | 46 | 19 | 0 | 100 | 145 | 200 | 245 | 8.88e-14 | 69.7 |
MS.gene22765.t1 | AT5G58580 | 46.053 | 76 | 39 | 1 | 75 | 148 | 111 | 186 | 9.24e-14 | 70.5 |
MS.gene22765.t1 | AT5G47610 | 28.099 | 121 | 75 | 3 | 27 | 145 | 42 | 152 | 9.35e-14 | 68.2 |
MS.gene22765.t1 | AT2G46160 | 36.905 | 84 | 44 | 1 | 75 | 149 | 104 | 187 | 1.14e-13 | 68.9 |
MS.gene22765.t1 | AT2G46160 | 36.905 | 84 | 44 | 1 | 75 | 149 | 104 | 187 | 1.14e-13 | 68.9 |
MS.gene22765.t1 | AT5G06490 | 45.763 | 59 | 32 | 0 | 100 | 158 | 129 | 187 | 1.41e-13 | 68.6 |
MS.gene22765.t1 | AT4G24015 | 40.299 | 67 | 40 | 0 | 82 | 148 | 87 | 153 | 1.44e-13 | 67.8 |
MS.gene22765.t1 | AT4G35480 | 53.191 | 47 | 22 | 0 | 99 | 145 | 112 | 158 | 2.13e-13 | 68.2 |
MS.gene22765.t1 | AT2G46493 | 51.064 | 47 | 23 | 0 | 100 | 146 | 138 | 184 | 2.39e-13 | 67.4 |
MS.gene22765.t1 | AT4G09130 | 39.474 | 76 | 42 | 1 | 75 | 146 | 91 | 166 | 2.69e-13 | 69.7 |
MS.gene22765.t1 | AT4G35840 | 56.522 | 46 | 20 | 0 | 100 | 145 | 191 | 236 | 3.63e-13 | 68.2 |
MS.gene22765.t1 | AT5G07040 | 41.250 | 80 | 38 | 3 | 75 | 148 | 66 | 142 | 7.72e-13 | 65.5 |
MS.gene22765.t1 | AT2G17730 | 58.140 | 43 | 18 | 0 | 100 | 142 | 196 | 238 | 9.90e-13 | 67.0 |
MS.gene22765.t1 | AT3G20395 | 33.000 | 100 | 66 | 1 | 47 | 146 | 119 | 217 | 1.86e-12 | 65.9 |
MS.gene22765.t1 | AT2G25410 | 53.191 | 47 | 22 | 0 | 97 | 143 | 324 | 370 | 2.49e-12 | 67.0 |
MS.gene22765.t1 | AT2G46495 | 40.278 | 72 | 39 | 1 | 75 | 142 | 263 | 334 | 2.56e-12 | 66.6 |
MS.gene22765.t1 | AT2G46495 | 52.174 | 46 | 22 | 0 | 97 | 142 | 317 | 362 | 2.87e-12 | 66.6 |
MS.gene22765.t1 | AT4G17245 | 49.123 | 57 | 28 | 1 | 95 | 150 | 97 | 153 | 3.27e-12 | 63.9 |
MS.gene22765.t1 | AT2G46494 | 53.191 | 47 | 22 | 0 | 100 | 146 | 316 | 362 | 3.98e-12 | 66.2 |
MS.gene22765.t1 | AT5G42200 | 30.370 | 135 | 77 | 4 | 24 | 150 | 29 | 154 | 4.16e-12 | 63.5 |
MS.gene22765.t1 | AT1G28040 | 53.488 | 43 | 20 | 0 | 100 | 142 | 253 | 295 | 5.12e-12 | 65.5 |
MS.gene22765.t1 | AT4G38140 | 44.928 | 69 | 36 | 2 | 88 | 154 | 50 | 118 | 9.28e-12 | 62.0 |
MS.gene22765.t1 | AT5G53110 | 38.554 | 83 | 44 | 2 | 75 | 152 | 302 | 382 | 1.03e-11 | 65.1 |
MS.gene22765.t1 | AT5G66160 | 34.400 | 125 | 64 | 7 | 22 | 142 | 164 | 274 | 2.77e-11 | 63.5 |
MS.gene22765.t1 | AT4G35840 | 46.552 | 58 | 29 | 1 | 90 | 145 | 211 | 268 | 3.00e-11 | 62.8 |
MS.gene22765.t1 | AT5G66160 | 32.143 | 140 | 77 | 7 | 22 | 157 | 164 | 289 | 3.41e-11 | 63.2 |
MS.gene22765.t1 | AT4G30370 | 41.429 | 70 | 38 | 2 | 75 | 142 | 89 | 157 | 3.53e-11 | 61.2 |
MS.gene22765.t1 | AT1G53010 | 51.064 | 47 | 23 | 0 | 99 | 145 | 129 | 175 | 3.59e-11 | 61.2 |
MS.gene22765.t1 | AT5G24870 | 33.735 | 83 | 46 | 3 | 77 | 151 | 437 | 518 | 4.05e-11 | 63.5 |
MS.gene22765.t1 | AT5G24870 | 33.735 | 83 | 46 | 3 | 77 | 151 | 437 | 518 | 4.05e-11 | 63.5 |
MS.gene22765.t1 | AT5G24870 | 33.735 | 83 | 46 | 3 | 77 | 151 | 437 | 518 | 4.05e-11 | 63.5 |
MS.gene22765.t1 | AT5G36001 | 45.283 | 53 | 29 | 0 | 97 | 149 | 261 | 313 | 5.86e-11 | 62.4 |
MS.gene22765.t1 | AT1G22670 | 26.190 | 126 | 72 | 4 | 20 | 142 | 167 | 274 | 8.09e-11 | 62.4 |
Find 84 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCCACAAATGTCTTGATT+TGG | 0.239718 | 7.3:-195391 | MS.gene22765:CDS |
TCCCACAAATGTCTTGATTT+GGG | 0.251331 | 7.3:-195390 | MS.gene22765:CDS |
AAAAGAAGATGGTTTGGATT+TGG | 0.260868 | 7.3:-195633 | MS.gene22765:CDS |
ATGAAGAAGAAGAGGTTATT+TGG | 0.277891 | 7.3:+195357 | None:intergenic |
CATCATCATTCTTCTCTTCA+TGG | 0.279773 | 7.3:-195825 | MS.gene22765:CDS |
CCTTTGGCTTTGTTTGTTGT+TGG | 0.285757 | 7.3:+195084 | None:intergenic |
CTTTGTCCTGCTGCTTCCTT+TGG | 0.292845 | 7.3:+195068 | None:intergenic |
GACCACTACGCCGGCGCCTT+CGG | 0.293588 | 7.3:+195717 | None:intergenic |
ACCACTACGCCGGCGCCTTC+GGG | 0.297711 | 7.3:+195718 | None:intergenic |
TACGCCGGCGCCTTCGGGAT+TGG | 0.316115 | 7.3:+195723 | None:intergenic |
ACGCCGGCGCCTTCGGGATT+GGG | 0.321029 | 7.3:+195724 | None:intergenic |
ACTCAACCTGCCCTCTTTGC+AGG | 0.327511 | 7.3:-195502 | MS.gene22765:CDS |
TGAAACATGTGATTGCATTT+AGG | 0.347113 | 7.3:+195557 | None:intergenic |
AAGTGGGACTCCAAGGATTC+AGG | 0.364051 | 7.3:+195114 | None:intergenic |
CAATTCAAAAGAAGATGGTT+TGG | 0.404245 | 7.3:-195639 | MS.gene22765:CDS |
CCCCAAATCAAGACATTTGT+GGG | 0.412724 | 7.3:+195389 | None:intergenic |
TTCTTCTTCATCTACTACTT+CGG | 0.413687 | 7.3:-195345 | MS.gene22765:CDS |
AAGAAGAGGTTATTTGGTTG+TGG | 0.426627 | 7.3:+195363 | None:intergenic |
TGCAAAGAGGGCAGGTTGAG+TGG | 0.431294 | 7.3:+195504 | None:intergenic |
TTTGAATTGAATATTGATAT+GGG | 0.436624 | 7.3:+195653 | None:intergenic |
TCCCCAGCCGTTGATATAAC+CGG | 0.439273 | 7.3:-195863 | MS.gene22765:CDS |
ATTTATAGTATTATCACCAT+TGG | 0.441813 | 7.3:+195298 | None:intergenic |
GTATAATGAGCCTGAATCCT+TGG | 0.447061 | 7.3:-195124 | MS.gene22765:CDS |
ATCATCATCACCCTTAGCTT+CGG | 0.447612 | 7.3:-195198 | MS.gene22765:CDS |
AGACGTGATGATGAAGGAAA+TGG | 0.450213 | 7.3:-195266 | MS.gene22765:CDS |
ATGAAGGAAATGGAATGTTA+AGG | 0.450806 | 7.3:-195256 | MS.gene22765:CDS |
CTCCTTCAACCACTTCCGAC+AGG | 0.455690 | 7.3:+195597 | None:intergenic |
TTCAACAATGAGTGACTCAT+TGG | 0.456625 | 7.3:-195912 | None:intergenic |
AGTAGTCGCCTCACACTCCC+TGG | 0.467906 | 7.3:+195223 | None:intergenic |
TTGCCGGTTATATCAACGGC+TGG | 0.471787 | 7.3:+195860 | None:intergenic |
ACATAGATTGCATTGATATG+TGG | 0.473099 | 7.3:-195535 | MS.gene22765:CDS |
TCTCCCTTCTGCCGAAGCTA+AGG | 0.473267 | 7.3:+195187 | None:intergenic |
GATGACCACCATGATCTTGC+CGG | 0.486374 | 7.3:+195844 | None:intergenic |
GAGGGCAGGTTGAGTGGGAA+TGG | 0.488860 | 7.3:+195510 | None:intergenic |
TGATATAACCGGCAAGATCA+TGG | 0.493165 | 7.3:-195852 | MS.gene22765:CDS |
CAAGAGTTGTCCTGCAAAGA+GGG | 0.497859 | 7.3:+195492 | None:intergenic |
ATATTCAATTCAAAAGAAGA+TGG | 0.498801 | 7.3:-195644 | MS.gene22765:CDS |
GCCCCAAATCAAGACATTTG+TGG | 0.499916 | 7.3:+195388 | None:intergenic |
TTCAGTTTGCCTGTCGGAAG+TGG | 0.506863 | 7.3:-195606 | MS.gene22765:CDS |
TGCCTGTCGGAAGTGGTTGA+AGG | 0.509140 | 7.3:-195599 | MS.gene22765:CDS |
CTCCCTTCTGCCGAAGCTAA+GGG | 0.510155 | 7.3:+195188 | None:intergenic |
TGCCGGTTATATCAACGGCT+GGG | 0.511321 | 7.3:+195861 | None:intergenic |
GGAGATTAAAGTCATTAAAG+AGG | 0.519320 | 7.3:-195169 | MS.gene22765:CDS |
CCCACAAATGTCTTGATTTG+GGG | 0.521017 | 7.3:-195389 | MS.gene22765:CDS |
TCACCCTTAGCTTCGGCAGA+AGG | 0.534028 | 7.3:-195191 | MS.gene22765:CDS |
GGAAGTGGTTGAAGGAGAAA+AGG | 0.536011 | 7.3:-195591 | MS.gene22765:CDS |
AATTGAATATTGATATGGGT+AGG | 0.538423 | 7.3:+195657 | None:intergenic |
ATTGAATATTGATATGGGTA+GGG | 0.539693 | 7.3:+195658 | None:intergenic |
AGTAGTAGATGAAGAAGAAG+AGG | 0.542343 | 7.3:+195349 | None:intergenic |
ACAAAGCCAAAGGAAGCAGC+AGG | 0.543151 | 7.3:-195074 | MS.gene22765:CDS |
TCCCGAAGGCGCCGGCGTAG+TGG | 0.543431 | 7.3:-195719 | MS.gene22765:CDS |
TATGGGTAGGGAGTTGAGTA+CGG | 0.544287 | 7.3:+195670 | None:intergenic |
ATTCCCAATCCCGAAGGCGC+CGG | 0.547400 | 7.3:-195727 | MS.gene22765:CDS |
CTGAGTCCACCAGAATCCCT+TGG | 0.552402 | 7.3:+195769 | None:intergenic |
CACCCTTAGCTTCGGCAGAA+GGG | 0.553724 | 7.3:-195190 | MS.gene22765:CDS |
AGTTGTCCTGCAAAGAGGGC+AGG | 0.569356 | 7.3:+195496 | None:intergenic |
GCCGGTTATATCAACGGCTG+GGG | 0.570359 | 7.3:+195862 | None:intergenic |
GCGCCGGCGTAGTGGTCAAG+AGG | 0.575061 | 7.3:-195711 | MS.gene22765:CDS |
ACAGTAGAAGTGGGACTCCA+AGG | 0.579015 | 7.3:+195107 | None:intergenic |
GCAAAGAGGGCAGGTTGAGT+GGG | 0.580151 | 7.3:+195505 | None:intergenic |
AGCAACAGACGTGATGATGA+AGG | 0.580501 | 7.3:-195272 | MS.gene22765:CDS |
TGTTAAGGATTGATATACCC+AGG | 0.588607 | 7.3:-195241 | MS.gene22765:CDS |
TGGTTGAAGGAGAAAAGGTG+AGG | 0.589581 | 7.3:-195586 | MS.gene22765:CDS |
GTAGTCGCCTCACACTCCCT+GGG | 0.592494 | 7.3:+195224 | None:intergenic |
GATCTTGCCGGTTATATCAA+CGG | 0.596991 | 7.3:+195856 | None:intergenic |
ACTACTACTGAGGAGGGAGG+AGG | 0.600788 | 7.3:+195461 | None:intergenic |
GGTTGAAGGAGAAAAGGTGA+GGG | 0.600820 | 7.3:-195585 | MS.gene22765:CDS |
CGTAGTGGTCAAGAGGGTGG+TGG | 0.601585 | 7.3:-195704 | MS.gene22765:CDS |
TGATATACCCAGGGAGTGTG+AGG | 0.605794 | 7.3:-195231 | MS.gene22765:CDS |
CGGCGTAGTGGTCAAGAGGG+TGG | 0.605954 | 7.3:-195707 | MS.gene22765:CDS |
GGTAGGGAGTTGAGTACGGA+AGG | 0.610522 | 7.3:+195674 | None:intergenic |
GCAAGAGTTGTCCTGCAAAG+AGG | 0.611110 | 7.3:+195491 | None:intergenic |
GATTCTGGTGGACTCAGAGT+CGG | 0.614221 | 7.3:-195763 | MS.gene22765:CDS |
GGAGTGTTCAGTTTGCCTGT+CGG | 0.621399 | 7.3:-195612 | MS.gene22765:CDS |
CGCCGGCGTAGTGGTCAAGA+GGG | 0.635932 | 7.3:-195710 | MS.gene22765:CDS |
ACTTCTTCATCGTCATCCAA+TGG | 0.639103 | 7.3:-195314 | MS.gene22765:CDS |
CACCCTCTTGACCACTACGC+CGG | 0.645060 | 7.3:+195708 | None:intergenic |
TTGTTGTTGGACAGTAGAAG+TGG | 0.654932 | 7.3:+195097 | None:intergenic |
CCAACAACAAACAAAGCCAA+AGG | 0.668139 | 7.3:-195084 | MS.gene22765:CDS |
GTTAAGGATTGATATACCCA+GGG | 0.671073 | 7.3:-195240 | MS.gene22765:CDS |
ACTACTACTACTGAGGAGGG+AGG | 0.677091 | 7.3:+195458 | None:intergenic |
ACAACAATTCCCAATCCCGA+AGG | 0.678435 | 7.3:-195733 | MS.gene22765:CDS |
TGTTGTTGGACAGTAGAAGT+GGG | 0.685363 | 7.3:+195098 | None:intergenic |
TATAACCGGCAAGATCATGG+TGG | 0.759577 | 7.3:-195849 | MS.gene22765:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGAATTGAATATTGATAT+GGG | + | chr7.3:195319-195338 | None:intergenic | 15.0% |
!!! | TTTTGAATTGAATATTGATA+TGG | + | chr7.3:195320-195339 | None:intergenic | 15.0% |
!! | ATATTCAATTCAAAAGAAGA+TGG | - | chr7.3:195325-195344 | MS.gene22765:CDS | 20.0% |
!! | ATTTATAGTATTATCACCAT+TGG | + | chr7.3:195674-195693 | None:intergenic | 20.0% |
! | AATTGAATATTGATATGGGT+AGG | + | chr7.3:195315-195334 | None:intergenic | 25.0% |
! | ATTGAATATTGATATGGGTA+GGG | + | chr7.3:195314-195333 | None:intergenic | 25.0% |
ATGAAGAAGAAGAGGTTATT+TGG | + | chr7.3:195615-195634 | None:intergenic | 30.0% | |
ATGAAGGAAATGGAATGTTA+AGG | - | chr7.3:195713-195732 | MS.gene22765:CDS | 30.0% | |
CAATTCAAAAGAAGATGGTT+TGG | - | chr7.3:195330-195349 | MS.gene22765:CDS | 30.0% | |
GGAGATTAAAGTCATTAAAG+AGG | - | chr7.3:195800-195819 | MS.gene22765:CDS | 30.0% | |
TGAAACATGTGATTGCATTT+AGG | + | chr7.3:195415-195434 | None:intergenic | 30.0% | |
TTCTTCTTCATCTACTACTT+CGG | - | chr7.3:195624-195643 | MS.gene22765:CDS | 30.0% | |
! | AAAAGAAGATGGTTTGGATT+TGG | - | chr7.3:195336-195355 | MS.gene22765:CDS | 30.0% |
! | ACATAGATTGCATTGATATG+TGG | - | chr7.3:195434-195453 | MS.gene22765:CDS | 30.0% |
AAGAAGAGGTTATTTGGTTG+TGG | + | chr7.3:195609-195628 | None:intergenic | 35.0% | |
AGTAGTAGATGAAGAAGAAG+AGG | + | chr7.3:195623-195642 | None:intergenic | 35.0% | |
CATCATCATTCTTCTCTTCA+TGG | - | chr7.3:195144-195163 | MS.gene22765:CDS | 35.0% | |
GTTAAGGATTGATATACCCA+GGG | - | chr7.3:195729-195748 | MS.gene22765:CDS | 35.0% | |
TCCCACAAATGTCTTGATTT+GGG | - | chr7.3:195579-195598 | MS.gene22765:CDS | 35.0% | |
TGTTAAGGATTGATATACCC+AGG | - | chr7.3:195728-195747 | MS.gene22765:CDS | 35.0% | |
TTCCCACAAATGTCTTGATT+TGG | - | chr7.3:195578-195597 | MS.gene22765:CDS | 35.0% | |
TTCTACTACTACTACTACTG+AGG | + | chr7.3:195521-195540 | None:intergenic | 35.0% | |
! | TTCTTCCATCTTTTTGCCAA+GGG | - | chr7.3:195184-195203 | MS.gene22765:CDS | 35.0% |
! | TTTCTTCCATCTTTTTGCCA+AGG | - | chr7.3:195183-195202 | MS.gene22765:CDS | 35.0% |
ACTACTACTACTACTGAGGA+GGG | + | chr7.3:195517-195536 | None:intergenic | 40.0% | |
ACTTCTTCATCGTCATCCAA+TGG | - | chr7.3:195655-195674 | MS.gene22765:CDS | 40.0% | |
AGAATCCCTTGGCAAAAAGA+TGG | + | chr7.3:195192-195211 | None:intergenic | 40.0% | |
ATCATCATCACCCTTAGCTT+CGG | - | chr7.3:195771-195790 | MS.gene22765:CDS | 40.0% | |
CCAACAACAAACAAAGCCAA+AGG | - | chr7.3:195885-195904 | MS.gene22765:CDS | 40.0% | |
CCCCAAATCAAGACATTTGT+GGG | + | chr7.3:195583-195602 | None:intergenic | 40.0% | |
GTATAATGAGCCTGAATCCT+TGG | - | chr7.3:195845-195864 | MS.gene22765:CDS | 40.0% | |
TACTACTACTACTACTGAGG+AGG | + | chr7.3:195518-195537 | None:intergenic | 40.0% | |
TGATATAACCGGCAAGATCA+TGG | - | chr7.3:195117-195136 | MS.gene22765:CDS | 40.0% | |
TGTTGTTGGACAGTAGAAGT+GGG | + | chr7.3:195874-195893 | None:intergenic | 40.0% | |
! | AGACGTGATGATGAAGGAAA+TGG | - | chr7.3:195703-195722 | MS.gene22765:CDS | 40.0% |
! | ATCTTTTTGCCAAGGGATTC+TGG | - | chr7.3:195191-195210 | MS.gene22765:CDS | 40.0% |
! | CCCACAAATGTCTTGATTTG+GGG | - | chr7.3:195580-195599 | MS.gene22765:CDS | 40.0% |
! | GATCTTGCCGGTTATATCAA+CGG | + | chr7.3:195116-195135 | None:intergenic | 40.0% |
! | TTGTTGTTGGACAGTAGAAG+TGG | + | chr7.3:195875-195894 | None:intergenic | 40.0% |
!! | CCTTTGGCTTTGTTTGTTGT+TGG | + | chr7.3:195888-195907 | None:intergenic | 40.0% |
ACAACAATTCCCAATCCCGA+AGG | - | chr7.3:195236-195255 | MS.gene22765:CDS | 45.0% | |
CAAGAGTTGTCCTGCAAAGA+GGG | + | chr7.3:195480-195499 | None:intergenic | 45.0% | |
GCCCCAAATCAAGACATTTG+TGG | + | chr7.3:195584-195603 | None:intergenic | 45.0% | |
GGAAGTGGTTGAAGGAGAAA+AGG | - | chr7.3:195378-195397 | MS.gene22765:CDS | 45.0% | |
GGTTGAAGGAGAAAAGGTGA+GGG | - | chr7.3:195384-195403 | MS.gene22765:CDS | 45.0% | |
TATAACCGGCAAGATCATGG+TGG | - | chr7.3:195120-195139 | MS.gene22765:CDS | 45.0% | |
TATGGGTAGGGAGTTGAGTA+CGG | + | chr7.3:195302-195321 | None:intergenic | 45.0% | |
TGGTTGAAGGAGAAAAGGTG+AGG | - | chr7.3:195383-195402 | MS.gene22765:CDS | 45.0% | |
! | AGCAACAGACGTGATGATGA+AGG | - | chr7.3:195697-195716 | MS.gene22765:CDS | 45.0% |
! | TTTTTGCCAAGGGATTCTGG+TGG | - | chr7.3:195194-195213 | MS.gene22765:CDS | 45.0% |
AAGTGGGACTCCAAGGATTC+AGG | + | chr7.3:195858-195877 | None:intergenic | 50.0% | |
ACAAAGCCAAAGGAAGCAGC+AGG | - | chr7.3:195895-195914 | MS.gene22765:CDS | 50.0% | |
ACAGTAGAAGTGGGACTCCA+AGG | + | chr7.3:195865-195884 | None:intergenic | 50.0% | |
ACTACTACTACTGAGGAGGG+AGG | + | chr7.3:195514-195533 | None:intergenic | 50.0% | |
GATGACCACCATGATCTTGC+CGG | + | chr7.3:195128-195147 | None:intergenic | 50.0% | |
GCAAGAGTTGTCCTGCAAAG+AGG | + | chr7.3:195481-195500 | None:intergenic | 50.0% | |
TCCCCAGCCGTTGATATAAC+CGG | - | chr7.3:195106-195125 | MS.gene22765:CDS | 50.0% | |
TTCAGTTTGCCTGTCGGAAG+TGG | - | chr7.3:195363-195382 | MS.gene22765:CDS | 50.0% | |
! | CTTTGTCCTGCTGCTTCCTT+TGG | + | chr7.3:195904-195923 | None:intergenic | 50.0% |
! | CTTTTAAGCAGCAGCAGCAG+AGG | - | chr7.3:195823-195842 | MS.gene22765:CDS | 50.0% |
! | GGAGTGTTCAGTTTGCCTGT+CGG | - | chr7.3:195357-195376 | MS.gene22765:CDS | 50.0% |
! | TGATATACCCAGGGAGTGTG+AGG | - | chr7.3:195738-195757 | MS.gene22765:CDS | 50.0% |
! | TGCCGGTTATATCAACGGCT+GGG | + | chr7.3:195111-195130 | None:intergenic | 50.0% |
! | TTGCCGGTTATATCAACGGC+TGG | + | chr7.3:195112-195131 | None:intergenic | 50.0% |
!! | GATTCTGGTGGACTCAGAGT+CGG | - | chr7.3:195206-195225 | MS.gene22765:CDS | 50.0% |
ACTACTACTGAGGAGGGAGG+AGG | + | chr7.3:195511-195530 | None:intergenic | 55.0% | |
ACTCAACCTGCCCTCTTTGC+AGG | - | chr7.3:195467-195486 | MS.gene22765:CDS | 55.0% | |
AGTTGTCCTGCAAAGAGGGC+AGG | + | chr7.3:195476-195495 | None:intergenic | 55.0% | |
CACCCTTAGCTTCGGCAGAA+GGG | - | chr7.3:195779-195798 | MS.gene22765:CDS | 55.0% | |
CTCCCTTCTGCCGAAGCTAA+GGG | + | chr7.3:195784-195803 | None:intergenic | 55.0% | |
CTCCTTCAACCACTTCCGAC+AGG | + | chr7.3:195375-195394 | None:intergenic | 55.0% | |
CTGAGTCCACCAGAATCCCT+TGG | + | chr7.3:195203-195222 | None:intergenic | 55.0% | |
GCCGGTTATATCAACGGCTG+GGG | + | chr7.3:195110-195129 | None:intergenic | 55.0% | |
GGTAGGGAGTTGAGTACGGA+AGG | + | chr7.3:195298-195317 | None:intergenic | 55.0% | |
TCACCCTTAGCTTCGGCAGA+AGG | - | chr7.3:195778-195797 | MS.gene22765:CDS | 55.0% | |
TCTCCCTTCTGCCGAAGCTA+AGG | + | chr7.3:195785-195804 | None:intergenic | 55.0% | |
TGCCTGTCGGAAGTGGTTGA+AGG | - | chr7.3:195370-195389 | MS.gene22765:CDS | 55.0% | |
! | GCAAAGAGGGCAGGTTGAGT+GGG | + | chr7.3:195467-195486 | None:intergenic | 55.0% |
! | TGCAAAGAGGGCAGGTTGAG+TGG | + | chr7.3:195468-195487 | None:intergenic | 55.0% |
AGTAGTCGCCTCACACTCCC+TGG | + | chr7.3:195749-195768 | None:intergenic | 60.0% | |
CACCCTCTTGACCACTACGC+CGG | + | chr7.3:195264-195283 | None:intergenic | 60.0% | |
CGTAGTGGTCAAGAGGGTGG+TGG | - | chr7.3:195265-195284 | MS.gene22765:CDS | 60.0% | |
GTAGTCGCCTCACACTCCCT+GGG | + | chr7.3:195748-195767 | None:intergenic | 60.0% | |
! | ATTCCCAATCCCGAAGGCGC+CGG | - | chr7.3:195242-195261 | MS.gene22765:CDS | 60.0% |
! | GAGGGCAGGTTGAGTGGGAA+TGG | + | chr7.3:195462-195481 | None:intergenic | 60.0% |
CGCCGGCGTAGTGGTCAAGA+GGG | - | chr7.3:195259-195278 | MS.gene22765:CDS | 65.0% | |
CGGCGTAGTGGTCAAGAGGG+TGG | - | chr7.3:195262-195281 | MS.gene22765:CDS | 65.0% | |
ACCACTACGCCGGCGCCTTC+GGG | + | chr7.3:195254-195273 | None:intergenic | 70.0% | |
ACGCCGGCGCCTTCGGGATT+GGG | + | chr7.3:195248-195267 | None:intergenic | 70.0% | |
GACCACTACGCCGGCGCCTT+CGG | + | chr7.3:195255-195274 | None:intergenic | 70.0% | |
TACGCCGGCGCCTTCGGGAT+TGG | + | chr7.3:195249-195268 | None:intergenic | 70.0% | |
! | GCGCCGGCGTAGTGGTCAAG+AGG | - | chr7.3:195258-195277 | MS.gene22765:CDS | 70.0% |
!! | TCCCGAAGGCGCCGGCGTAG+TGG | - | chr7.3:195250-195269 | MS.gene22765:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 195064 | 195927 | 195064 | ID=MS.gene22765 |
chr7.3 | mRNA | 195064 | 195927 | 195064 | ID=MS.gene22765.t1;Parent=MS.gene22765 |
chr7.3 | exon | 195064 | 195927 | 195064 | ID=MS.gene22765.t1.exon1;Parent=MS.gene22765.t1 |
chr7.3 | CDS | 195064 | 195927 | 195064 | ID=cds.MS.gene22765.t1;Parent=MS.gene22765.t1 |
Gene Sequence |
Protein sequence |