Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22883.t1 | XP_004494665.1 | 94.5 | 253 | 14 | 0 | 1 | 253 | 1 | 253 | 3.80E-130 | 474.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22883.t1 | Q8BH57 | 35.4 | 243 | 108 | 7 | 13 | 253 | 8 | 203 | 1.8e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22883.t1 | A0A1S2XVQ5 | 94.5 | 253 | 14 | 0 | 1 | 253 | 1 | 253 | 2.7e-130 | 474.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049209 | MS.gene22883 | 0.802576 | 5.25E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene22883 | 0.828615 | 8.15E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22883.t1 | MTR_7g114370 | 98.769 | 325 | 4 | 0 | 1 | 325 | 6 | 330 | 0.0 | 655 |
| MS.gene22883.t1 | MTR_1g081830 | 82.769 | 325 | 55 | 1 | 1 | 325 | 1 | 324 | 0.0 | 550 |
| MS.gene22883.t1 | MTR_1g081830 | 82.534 | 292 | 50 | 1 | 34 | 325 | 6 | 296 | 4.02e-170 | 490 |
| MS.gene22883.t1 | MTR_4g105700 | 24.138 | 319 | 224 | 7 | 19 | 323 | 333 | 647 | 2.71e-19 | 89.4 |
| MS.gene22883.t1 | MTR_4g071130 | 24.088 | 274 | 176 | 8 | 52 | 320 | 62 | 308 | 9.45e-15 | 75.5 |
| MS.gene22883.t1 | MTR_1g072140 | 25.506 | 247 | 168 | 7 | 83 | 323 | 68 | 304 | 1.01e-14 | 73.9 |
| MS.gene22883.t1 | MTR_4g119620 | 26.000 | 250 | 165 | 8 | 80 | 321 | 74 | 311 | 1.04e-14 | 73.9 |
| MS.gene22883.t1 | MTR_4g119620 | 32.479 | 117 | 74 | 1 | 192 | 308 | 57 | 168 | 3.99e-12 | 66.6 |
| MS.gene22883.t1 | MTR_2g436510 | 26.407 | 231 | 118 | 5 | 83 | 312 | 169 | 348 | 3.59e-14 | 73.2 |
| MS.gene22883.t1 | MTR_2g436510 | 31.481 | 108 | 74 | 0 | 216 | 323 | 168 | 275 | 4.12e-14 | 73.2 |
| MS.gene22883.t1 | MTR_2g436510 | 29.310 | 116 | 82 | 0 | 208 | 323 | 202 | 317 | 7.30e-11 | 63.2 |
| MS.gene22883.t1 | MTR_2g019400 | 37.624 | 101 | 63 | 0 | 216 | 316 | 73 | 173 | 7.35e-14 | 70.9 |
| MS.gene22883.t1 | MTR_2g012630 | 29.630 | 108 | 76 | 0 | 216 | 323 | 56 | 163 | 1.82e-13 | 71.6 |
| MS.gene22883.t1 | MTR_2g012630 | 23.116 | 199 | 146 | 2 | 125 | 323 | 14 | 205 | 8.93e-11 | 63.5 |
| MS.gene22883.t1 | MTR_2g012630 | 29.630 | 108 | 76 | 0 | 216 | 323 | 56 | 163 | 1.92e-13 | 71.6 |
| MS.gene22883.t1 | MTR_2g012630 | 23.116 | 199 | 146 | 2 | 125 | 323 | 14 | 205 | 9.02e-11 | 63.5 |
| MS.gene22883.t1 | MTR_4g123597 | 31.481 | 108 | 74 | 0 | 216 | 323 | 104 | 211 | 7.76e-13 | 69.7 |
| MS.gene22883.t1 | MTR_5g022690 | 29.703 | 101 | 71 | 0 | 212 | 312 | 315 | 415 | 2.02e-12 | 68.2 |
| MS.gene22883.t1 | MTR_6g004040 | 28.571 | 112 | 80 | 0 | 212 | 323 | 53 | 164 | 8.85e-12 | 66.2 |
| MS.gene22883.t1 | MTR_6g004040 | 25.500 | 200 | 140 | 4 | 125 | 323 | 15 | 206 | 3.17e-11 | 64.7 |
| MS.gene22883.t1 | MTR_3g045130 | 29.897 | 97 | 68 | 0 | 216 | 312 | 396 | 492 | 1.10e-11 | 65.9 |
| MS.gene22883.t1 | MTR_3g106080 | 37.363 | 91 | 57 | 0 | 233 | 323 | 518 | 608 | 1.57e-11 | 65.5 |
| MS.gene22883.t1 | MTR_1g054300 | 22.222 | 234 | 160 | 6 | 94 | 323 | 260 | 475 | 4.70e-11 | 63.9 |
| MS.gene22883.t1 | MTR_8g106790 | 27.907 | 258 | 169 | 9 | 50 | 300 | 26 | 273 | 8.60e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22883.t1 | AT3G05090 | 71.827 | 323 | 86 | 1 | 1 | 323 | 1 | 318 | 2.61e-170 | 491 |
| MS.gene22883.t1 | AT3G05090 | 71.827 | 323 | 86 | 1 | 1 | 323 | 1 | 318 | 2.61e-170 | 491 |
| MS.gene22883.t1 | AT3G05090 | 71.827 | 323 | 86 | 1 | 1 | 323 | 1 | 318 | 2.61e-170 | 491 |
| MS.gene22883.t1 | AT5G16750 | 23.932 | 234 | 172 | 3 | 94 | 323 | 415 | 646 | 1.56e-15 | 77.8 |
| MS.gene22883.t1 | AT2G21390 | 23.810 | 273 | 178 | 8 | 52 | 320 | 62 | 308 | 1.54e-14 | 75.1 |
| MS.gene22883.t1 | AT1G11160 | 28.000 | 200 | 135 | 4 | 125 | 323 | 14 | 205 | 1.59e-14 | 75.1 |
| MS.gene22883.t1 | AT1G11160 | 28.000 | 200 | 135 | 4 | 125 | 323 | 14 | 205 | 1.77e-14 | 74.7 |
| MS.gene22883.t1 | AT1G11160 | 28.000 | 200 | 135 | 4 | 125 | 323 | 14 | 205 | 1.82e-14 | 74.7 |
| MS.gene22883.t1 | AT4G15900 | 30.275 | 109 | 76 | 0 | 215 | 323 | 173 | 281 | 5.24e-14 | 72.8 |
| MS.gene22883.t1 | AT4G15900 | 23.600 | 250 | 137 | 6 | 66 | 312 | 156 | 354 | 1.32e-12 | 68.6 |
| MS.gene22883.t1 | AT1G62020 | 24.364 | 275 | 174 | 9 | 52 | 320 | 62 | 308 | 7.40e-14 | 73.2 |
| MS.gene22883.t1 | AT3G16650 | 31.193 | 109 | 75 | 0 | 215 | 323 | 167 | 275 | 9.48e-14 | 72.0 |
| MS.gene22883.t1 | AT3G21540 | 29.762 | 168 | 101 | 3 | 166 | 323 | 51 | 211 | 1.53e-13 | 72.0 |
| MS.gene22883.t1 | AT2G41500 | 23.510 | 302 | 149 | 10 | 51 | 325 | 253 | 499 | 7.18e-13 | 69.7 |
| MS.gene22883.t1 | AT2G41500 | 23.510 | 302 | 149 | 10 | 51 | 325 | 253 | 499 | 7.18e-13 | 69.7 |
| MS.gene22883.t1 | AT1G61210 | 29.630 | 108 | 76 | 0 | 216 | 323 | 56 | 163 | 7.75e-13 | 69.7 |
| MS.gene22883.t1 | AT1G61210 | 24.121 | 199 | 144 | 2 | 125 | 323 | 14 | 205 | 8.57e-11 | 63.5 |
| MS.gene22883.t1 | AT1G61210 | 29.630 | 108 | 76 | 0 | 216 | 323 | 56 | 163 | 8.43e-13 | 69.7 |
| MS.gene22883.t1 | AT1G61210 | 29.630 | 108 | 76 | 0 | 216 | 323 | 56 | 163 | 9.67e-13 | 69.7 |
| MS.gene22883.t1 | AT5G13480 | 33.019 | 106 | 71 | 0 | 216 | 321 | 235 | 340 | 1.24e-12 | 68.9 |
| MS.gene22883.t1 | AT5G13480 | 33.019 | 106 | 71 | 0 | 216 | 321 | 235 | 340 | 1.36e-12 | 68.9 |
| MS.gene22883.t1 | AT5G13480 | 33.019 | 106 | 71 | 0 | 216 | 321 | 258 | 363 | 1.50e-12 | 68.9 |
| MS.gene22883.t1 | AT5G13480 | 33.019 | 106 | 71 | 0 | 216 | 321 | 247 | 352 | 1.59e-12 | 68.6 |
| MS.gene22883.t1 | AT3G49660 | 23.413 | 252 | 173 | 8 | 80 | 323 | 67 | 306 | 1.73e-12 | 67.4 |
| MS.gene22883.t1 | AT4G02730 | 21.477 | 298 | 204 | 9 | 34 | 321 | 42 | 319 | 1.15e-11 | 65.1 |
| MS.gene22883.t1 | AT5G08390 | 28.704 | 108 | 77 | 0 | 216 | 323 | 57 | 164 | 1.32e-11 | 65.9 |
| MS.gene22883.t1 | AT5G23430 | 29.630 | 108 | 76 | 0 | 216 | 323 | 57 | 164 | 1.58e-11 | 65.9 |
| MS.gene22883.t1 | AT5G23430 | 29.630 | 108 | 76 | 0 | 216 | 323 | 57 | 164 | 1.58e-11 | 65.9 |
| MS.gene22883.t1 | AT1G11160 | 28.704 | 108 | 77 | 0 | 216 | 323 | 14 | 121 | 1.63e-11 | 65.9 |
| MS.gene22883.t1 | AT1G11160 | 29.730 | 111 | 78 | 0 | 213 | 323 | 53 | 163 | 3.22e-11 | 64.7 |
| MS.gene22883.t1 | AT5G23430 | 29.630 | 108 | 76 | 0 | 216 | 323 | 57 | 164 | 1.66e-11 | 65.9 |
| MS.gene22883.t1 | AT5G52820 | 21.927 | 301 | 212 | 7 | 26 | 323 | 185 | 465 | 2.12e-11 | 65.1 |
| MS.gene22883.t1 | AT1G49040 | 24.686 | 239 | 158 | 7 | 92 | 323 | 860 | 1083 | 7.57e-11 | 63.9 |
Find 83 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAAGATTCTAAAGCTTAA+AGG | 0.236906 | 7.3:+2480771 | MS.gene22883:CDS |
| TGCTATAGGTTGTACGTGTC+TGG | 0.246316 | 7.3:+2480733 | MS.gene22883:intron |
| TAACATCAGGGCTCTACTTC+TGG | 0.253989 | 7.3:+2480803 | MS.gene22883:CDS |
| GGGTCAGATTATCTATTTAC+TGG | 0.320882 | 7.3:+2479290 | MS.gene22883:CDS |
| TTGCCTCTGGTGGCCTTGGT+GGG | 0.327331 | 7.3:+2480269 | MS.gene22883:CDS |
| TGTCCACTGGAACTTGTGTT+AGG | 0.357655 | 7.3:+2480016 | MS.gene22883:CDS |
| CTCTGGTGGCCTTGGTGGGG+AGG | 0.358764 | 7.3:+2480273 | MS.gene22883:CDS |
| TATAAACATGACTAAATGTT+GGG | 0.361220 | 7.3:-2482294 | None:intergenic |
| ATGCATAAACAGACTCCTTA+TGG | 0.363552 | 7.3:-2480492 | None:intergenic |
| TTCTTCAGATACAACCCTTA+AGG | 0.368867 | 7.3:+2479890 | MS.gene22883:CDS |
| TTATGGCCTTTGGCAGCAAT+TGG | 0.371070 | 7.3:-2480475 | None:intergenic |
| CAAAGATTCTAAAGCTTAAA+GGG | 0.377744 | 7.3:+2480772 | MS.gene22883:CDS |
| AACAGACTCCTTATGGCCTT+TGG | 0.392109 | 7.3:-2480485 | None:intergenic |
| ATTGTTGCCTCTGGTGGCCT+TGG | 0.392138 | 7.3:+2480265 | MS.gene22883:CDS |
| AATCTCTCCTCGTAGGCTTT+GGG | 0.410733 | 7.3:+2482201 | MS.gene22883:intron |
| AAGCAATCAACAAACCTTAA+GGG | 0.413561 | 7.3:-2479904 | None:intergenic |
| CAGTTCATACAGATTCTGTT+TGG | 0.417646 | 7.3:+2482257 | MS.gene22883:CDS |
| CCTTTGAATCTCACGTGGAC+TGG | 0.419045 | 7.3:+2479375 | MS.gene22883:CDS |
| GTTGCCTCTGGTGGCCTTGG+TGG | 0.419437 | 7.3:+2480268 | MS.gene22883:CDS |
| TAGAGCAATATTGTTGCCTC+TGG | 0.425078 | 7.3:+2480256 | MS.gene22883:intron |
| ACATTTAGTCATGTTTATAG+TGG | 0.431116 | 7.3:+2482298 | MS.gene22883:CDS |
| GTTACTTGCCTCGCAGCAGC+TGG | 0.436280 | 7.3:+2480063 | MS.gene22883:CDS |
| CAGATATTGCAGATGTAAGT+AGG | 0.439795 | 7.3:-2479265 | None:intergenic |
| TGCCTCTGGTGGCCTTGGTG+GGG | 0.443373 | 7.3:+2480270 | MS.gene22883:CDS |
| GAATCTTCAAATGGTATCAA+TGG | 0.452397 | 7.3:+2480361 | MS.gene22883:CDS |
| AGCAATATTGTTGCCTCTGG+TGG | 0.455333 | 7.3:+2480259 | MS.gene22883:CDS |
| AGTTCATACAGATTCTGTTT+GGG | 0.464357 | 7.3:+2482258 | MS.gene22883:CDS |
| GGTGGATCGATTCTTGTCTC+TGG | 0.471544 | 7.3:+2480529 | MS.gene22883:CDS |
| CGTGTCTGGGACACAAGATC+AGG | 0.476205 | 7.3:+2480747 | MS.gene22883:CDS |
| CCTCGTAGGCTTTGGGATAT+AGG | 0.477573 | 7.3:+2482208 | MS.gene22883:intron |
| CTTACATCTGCAATATCTGA+TGG | 0.478174 | 7.3:+2479269 | MS.gene22883:CDS |
| TTGTGCAGGCATAAATTGTC+TGG | 0.480968 | 7.3:+2479241 | MS.gene22883:CDS |
| ACATGGAATGCTTTGTCCAC+TGG | 0.481279 | 7.3:+2480003 | MS.gene22883:CDS |
| AAGGGCACACAGATAACATC+AGG | 0.482557 | 7.3:+2480790 | MS.gene22883:CDS |
| GTTAATGATGCAGTTCTTGT+CGG | 0.482751 | 7.3:+2479846 | MS.gene22883:CDS |
| CTATAAACATGACTAAATGT+TGG | 0.491366 | 7.3:-2482295 | None:intergenic |
| TGTCTCTGGTGGCACAGAAA+AGG | 0.494800 | 7.3:+2480543 | MS.gene22883:CDS |
| AATTGCTGCCAAAGGCCATA+AGG | 0.495002 | 7.3:+2480477 | MS.gene22883:CDS |
| ATGACTAAATGTTGGGGTGC+TGG | 0.495507 | 7.3:-2482287 | None:intergenic |
| ATGCACCGCGTGGCTAGTAC+GGG | 0.496392 | 7.3:+2478271 | MS.gene22883:CDS |
| CTCTAAGTGCAGTGATGCTA+TGG | 0.497680 | 7.3:+2480333 | MS.gene22883:CDS |
| GTGATGGCAGGCTAAAACGA+TGG | 0.504238 | 7.3:+2479318 | MS.gene22883:CDS |
| TTACTGGAAGCCGTGATGGC+AGG | 0.510157 | 7.3:+2479306 | MS.gene22883:CDS |
| TAAGGAGTCTGTTTATGCAT+TGG | 0.515748 | 7.3:+2480495 | MS.gene22883:CDS |
| CTATTTACTGGAAGCCGTGA+TGG | 0.518993 | 7.3:+2479302 | MS.gene22883:CDS |
| CTTTGAATCTCACGTGGACT+GGG | 0.519641 | 7.3:+2479376 | MS.gene22883:CDS |
| CCAGTCCACGTGAGATTCAA+AGG | 0.525008 | 7.3:-2479375 | None:intergenic |
| GCATCACTGCACTTAGAGAC+TGG | 0.525644 | 7.3:-2480328 | None:intergenic |
| GATCATCAGATTCTATGATA+AGG | 0.528435 | 7.3:+2482119 | MS.gene22883:CDS |
| TTTAGTCATGTTTATAGTGG+TGG | 0.531160 | 7.3:+2482301 | MS.gene22883:CDS |
| TATGCATTGGCCATGGATGA+AGG | 0.537845 | 7.3:+2480508 | MS.gene22883:CDS |
| TACTTCTGGATTCCACTGGA+AGG | 0.541389 | 7.3:+2480817 | MS.gene22883:CDS |
| CAATTCAACTCGCCCTCGAA+AGG | 0.541859 | 7.3:+2478303 | MS.gene22883:CDS |
| CTCCCCACCAAGGCCACCAG+AGG | 0.543182 | 7.3:-2480272 | None:intergenic |
| ATGGTTGATGAATCTTCAAA+TGG | 0.544584 | 7.3:+2480352 | MS.gene22883:CDS |
| GTTTGTCGAAGGTAGTAAGT+TGG | 0.548729 | 7.3:-2480389 | None:intergenic |
| GTCTGTTTATGCATTGGCCA+TGG | 0.553488 | 7.3:+2480501 | MS.gene22883:CDS |
| GCTATAGGTTGTACGTGTCT+GGG | 0.555869 | 7.3:+2480734 | MS.gene22883:intron |
| GCTCTACTTCTGGATTCCAC+TGG | 0.558687 | 7.3:+2480813 | MS.gene22883:CDS |
| TGATGGCAGGCTAAAACGAT+GGG | 0.560295 | 7.3:+2479319 | MS.gene22883:CDS |
| AGATATTGCAGATGTAAGTA+GGG | 0.563349 | 7.3:-2479264 | None:intergenic |
| AATCGATCCACCTTCATCCA+TGG | 0.565033 | 7.3:-2480518 | None:intergenic |
| TACATTCCAATTGCTGCCAA+AGG | 0.576452 | 7.3:+2480469 | MS.gene22883:CDS |
| GGATCGATTCTTGTCTCTGG+TGG | 0.577024 | 7.3:+2480532 | MS.gene22883:CDS |
| TAACATAATCAGTATGTTGG+CGG | 0.578018 | 7.3:-2480044 | None:intergenic |
| TTACATCTGCAATATCTGAT+GGG | 0.584709 | 7.3:+2479270 | MS.gene22883:CDS |
| TTGCACACTACTCAAACTCA+AGG | 0.599680 | 7.3:+2480445 | MS.gene22883:CDS |
| AAAACGATGGGCGCTAGCTG+AGG | 0.602174 | 7.3:+2479331 | MS.gene22883:CDS |
| AAGTAACATAATCAGTATGT+TGG | 0.606084 | 7.3:-2480047 | None:intergenic |
| TTGAGTTTGAGTAGTGTGCA+AGG | 0.620900 | 7.3:-2480443 | None:intergenic |
| TCATTCTACAAACCTTCCAG+TGG | 0.628158 | 7.3:-2480829 | None:intergenic |
| ATAAACATGACTAAATGTTG+GGG | 0.629815 | 7.3:-2482293 | None:intergenic |
| CTTAGAGACTGGAGCAAGCG+CGG | 0.630710 | 7.3:-2480317 | None:intergenic |
| TGCTACCTTTGAATCTCACG+TGG | 0.639609 | 7.3:+2479370 | MS.gene22883:CDS |
| ATAGTACGCAAGTTTGTCGA+AGG | 0.640472 | 7.3:-2480400 | None:intergenic |
| TGTCCTAACACAAGTTCCAG+TGG | 0.657964 | 7.3:-2480019 | None:intergenic |
| TGCACACTACTCAAACTCAA+GGG | 0.665642 | 7.3:+2480446 | MS.gene22883:CDS |
| CGTTGCCCGTACTAGCCACG+CGG | 0.666609 | 7.3:-2478276 | None:intergenic |
| GCATTGGCCATGGATGAAGG+TGG | 0.705043 | 7.3:+2480511 | MS.gene22883:CDS |
| AGTTACCGCAATGCACCGCG+TGG | 0.721149 | 7.3:+2478261 | None:intergenic |
| AGGGCACACAGATAACATCA+GGG | 0.721703 | 7.3:+2480791 | MS.gene22883:CDS |
| GAACGACTCTGATGACACAA+AGG | 0.751006 | 7.3:+2478348 | MS.gene22883:CDS |
| TAGTGTGCAAGGATATACTG+TGG | 0.809345 | 7.3:-2480432 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTATTTATTTATTT+GGG | + | chr7.3:2480709-2480728 | MS.gene22883:intron | 0.0% |
| !! | AAAAATTTATTCAATGAAAA+AGG | - | chr7.3:2482012-2482031 | None:intergenic | 10.0% |
| !! | ATTTCTAAATAAAAATTACA+AGG | + | chr7.3:2478939-2478958 | MS.gene22883:intron | 10.0% |
| !! | TAGAAGAATTAAAAAAAATG+AGG | - | chr7.3:2480955-2480974 | None:intergenic | 15.0% |
| !! | TATAAAATTGATTAGAATAG+CGG | + | chr7.3:2481601-2481620 | MS.gene22883:intron | 15.0% |
| !! | TTAATGTATTTGTATTGAAA+TGG | + | chr7.3:2479057-2479076 | MS.gene22883:intron | 15.0% |
| !!! | ATTTTTTATTAGCATTGATT+TGG | + | chr7.3:2479685-2479704 | MS.gene22883:intron | 15.0% |
| !!! | TAATACTTTTCTTAGAATTT+GGG | + | chr7.3:2481036-2481055 | MS.gene22883:intron | 15.0% |
| !!! | TTAGAAGTTGATATTTAAAA+AGG | - | chr7.3:2479646-2479665 | None:intergenic | 15.0% |
| !!! | TTATTTATTTTATTTGCTCT+CGG | + | chr7.3:2478386-2478405 | MS.gene22883:intron | 15.0% |
| !!! | TTTTTTTAATTCTTCTAGTT+TGG | + | chr7.3:2480958-2480977 | MS.gene22883:intron | 15.0% |
| !! | AGAAAATGAGAAGAAATAAA+AGG | - | chr7.3:2479406-2479425 | None:intergenic | 20.0% |
| !! | AGTACATAATATAGTATTGT+CGG | - | chr7.3:2479943-2479962 | None:intergenic | 20.0% |
| !! | ATTGAATCTAATAGATACTT+TGG | + | chr7.3:2480170-2480189 | MS.gene22883:intron | 20.0% |
| !! | TAGAAATTCAATATAATCCT+TGG | - | chr7.3:2478926-2478945 | None:intergenic | 20.0% |
| !! | TATAAACATGACTAAATGTT+GGG | - | chr7.3:2482297-2482316 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGAAGCTAAAGTT+TGG | + | chr7.3:2478759-2478778 | MS.gene22883:intron | 20.0% |
| !!! | CAATTTGATTTTTAACTGTT+TGG | - | chr7.3:2478890-2478909 | None:intergenic | 20.0% |
| !!! | GTAATACTTTTCTTAGAATT+TGG | + | chr7.3:2481035-2481054 | MS.gene22883:intron | 20.0% |
| !!! | TTATAGCATTTTATTTTTGC+AGG | + | chr7.3:2482083-2482102 | MS.gene22883:intron | 20.0% |
| !!! | TTTAGCTTCAAAAAAATAGA+GGG | - | chr7.3:2478756-2478775 | None:intergenic | 20.0% |
| !!! | TTTTAAATTGACTCAGTTTT+TGG | + | chr7.3:2479620-2479639 | MS.gene22883:intron | 20.0% |
| ! | AAAAATTACAAGGTCCAAAA+TGG | + | chr7.3:2478949-2478968 | MS.gene22883:intron | 25.0% |
| ! | AAACTAATGCAACTTATAAC+AGG | + | chr7.3:2479769-2479788 | MS.gene22883:intron | 25.0% |
| ! | AAGTAACATAATCAGTATGT+TGG | - | chr7.3:2480050-2480069 | None:intergenic | 25.0% |
| ! | AAGTCTAAATACAGTTTACT+AGG | - | chr7.3:2478851-2478870 | None:intergenic | 25.0% |
| ! | AATGAAATTCACCAAACAAA+TGG | - | chr7.3:2479435-2479454 | None:intergenic | 25.0% |
| ! | ACATTTAGTCATGTTTATAG+TGG | + | chr7.3:2482298-2482317 | MS.gene22883:CDS | 25.0% |
| ! | AGTATCTATTAGATTCAATG+TGG | - | chr7.3:2480169-2480188 | None:intergenic | 25.0% |
| ! | ATAAACATGACTAAATGTTG+GGG | - | chr7.3:2482296-2482315 | None:intergenic | 25.0% |
| ! | CTATAAACATGACTAAATGT+TGG | - | chr7.3:2482298-2482317 | None:intergenic | 25.0% |
| ! | CTCAAATTGTAGTATTTGAA+TGG | + | chr7.3:2478813-2478832 | MS.gene22883:intron | 25.0% |
| ! | GTGTATTGTTATCTATCTAT+AGG | - | chr7.3:2481004-2481023 | None:intergenic | 25.0% |
| ! | TAGTTTCATTTCATGTTTAG+CGG | - | chr7.3:2479755-2479774 | None:intergenic | 25.0% |
| ! | TCTGATTTAGTGCATAAAAA+AGG | + | chr7.3:2480119-2480138 | MS.gene22883:intron | 25.0% |
| ! | TTAAAGCACACATAAATTGA+AGG | - | chr7.3:2480919-2480938 | None:intergenic | 25.0% |
| ! | TTAGCTTCAAAAAAATAGAG+GGG | - | chr7.3:2478755-2478774 | None:intergenic | 25.0% |
| ! | TTATGAACAATCTAAGTCAA+TGG | - | chr7.3:2479576-2479595 | None:intergenic | 25.0% |
| !! | ATTGACGTAATAATTTTCCA+AGG | + | chr7.3:2478906-2478925 | MS.gene22883:intron | 25.0% |
| !! | CTTTAGCTTCAAAAAAATAG+AGG | - | chr7.3:2478757-2478776 | None:intergenic | 25.0% |
| !! | GCCAAAATAGTCTTTTTAAA+AGG | - | chr7.3:2481110-2481129 | None:intergenic | 25.0% |
| !! | TATTCAATGAAAAAGGCATA+TGG | - | chr7.3:2482005-2482024 | None:intergenic | 25.0% |
| !!! | AATAGTCTTTTTAAAAGGCT+TGG | - | chr7.3:2481105-2481124 | None:intergenic | 25.0% |
| !!! | ACTCCTTTTGTTTTTTAACT+GGG | + | chr7.3:2479960-2479979 | MS.gene22883:intron | 25.0% |
| !!! | ATAGTCTTTTTAAAAGGCTT+GGG | - | chr7.3:2481104-2481123 | None:intergenic | 25.0% |
| !!! | CAAAGATTCTAAAGCTTAAA+GGG | + | chr7.3:2480772-2480791 | MS.gene22883:CDS | 25.0% |
| !!! | GCCTTTTAAAAAGACTATTT+TGG | + | chr7.3:2481106-2481125 | MS.gene22883:intron | 25.0% |
| !!! | TACTCCTTTTGTTTTTTAAC+TGG | + | chr7.3:2479959-2479978 | MS.gene22883:intron | 25.0% |
| !!! | TCAAAGATTCTAAAGCTTAA+AGG | + | chr7.3:2480771-2480790 | MS.gene22883:CDS | 25.0% |
| AAAACTTGATAGAGTGAATC+CGG | - | chr7.3:2481364-2481383 | None:intergenic | 30.0% | |
| AAGCAATCAACAAACCTTAA+GGG | - | chr7.3:2479907-2479926 | None:intergenic | 30.0% | |
| AATTCACCAAACAAATGGAA+AGG | - | chr7.3:2479430-2479449 | None:intergenic | 30.0% | |
| ACAATGAAAGAAATGCTGTT+GGG | + | chr7.3:2481957-2481976 | MS.gene22883:intron | 30.0% | |
| ACATAGCTAATGAAAGTTCT+TGG | - | chr7.3:2481909-2481928 | None:intergenic | 30.0% | |
| AGATATTGCAGATGTAAGTA+GGG | - | chr7.3:2479267-2479286 | None:intergenic | 30.0% | |
| AGTTTCATTTCATGTTTAGC+GGG | - | chr7.3:2479754-2479773 | None:intergenic | 30.0% | |
| ATGCACTAAATCAGAAACTT+GGG | - | chr7.3:2480114-2480133 | None:intergenic | 30.0% | |
| CAACCCAGTTAAAAAACAAA+AGG | - | chr7.3:2479966-2479985 | None:intergenic | 30.0% | |
| CATAGCTAATGAAAGTTCTT+GGG | - | chr7.3:2481908-2481927 | None:intergenic | 30.0% | |
| GAACTCTTGCAAATTTAACT+TGG | + | chr7.3:2478695-2478714 | MS.gene22883:intron | 30.0% | |
| GAATCTTCAAATGGTATCAA+TGG | + | chr7.3:2480361-2480380 | MS.gene22883:CDS | 30.0% | |
| GATCATCAGATTCTATGATA+AGG | + | chr7.3:2482119-2482138 | MS.gene22883:CDS | 30.0% | |
| GTTATCTATCTATAGGTTGT+AGG | - | chr7.3:2480997-2481016 | None:intergenic | 30.0% | |
| TAACATAATCAGTATGTTGG+CGG | - | chr7.3:2480047-2480066 | None:intergenic | 30.0% | |
| TAAGCAATCAACAAACCTTA+AGG | - | chr7.3:2479908-2479927 | None:intergenic | 30.0% | |
| TACAATGAAAGAAATGCTGT+TGG | + | chr7.3:2481956-2481975 | MS.gene22883:intron | 30.0% | |
| TATGCACTAAATCAGAAACT+TGG | - | chr7.3:2480115-2480134 | None:intergenic | 30.0% | |
| TCATTTGCAAGTGTAGTTTA+AGG | + | chr7.3:2479007-2479026 | MS.gene22883:intron | 30.0% | |
| TTACATCTGCAATATCTGAT+GGG | + | chr7.3:2479270-2479289 | MS.gene22883:CDS | 30.0% | |
| TTAGCTAGTTGAGATTGATT+TGG | + | chr7.3:2478470-2478489 | MS.gene22883:intron | 30.0% | |
| TTTAGTCATGTTTATAGTGG+TGG | + | chr7.3:2482301-2482320 | MS.gene22883:CDS | 30.0% | |
| TTTCTTCCTTTCCATTTGTT+TGG | + | chr7.3:2479421-2479440 | MS.gene22883:intron | 30.0% | |
| ! | AAACGTTTTTCTATTCTTGC+AGG | + | chr7.3:2479824-2479843 | MS.gene22883:intron | 30.0% |
| ! | AGTCTACTGTCTTTGAAAAT+TGG | + | chr7.3:2479203-2479222 | MS.gene22883:intron | 30.0% |
| ! | ATCTGGAACATGAAAAAATG+TGG | + | chr7.3:2481180-2481199 | MS.gene22883:intron | 30.0% |
| ! | ATTTTCCACTAGCTAGATTA+TGG | + | chr7.3:2480648-2480667 | MS.gene22883:intron | 30.0% |
| ! | TCTGGAACATGAAAAAATGT+GGG | + | chr7.3:2481181-2481200 | MS.gene22883:intron | 30.0% |
| ! | TTATTGACTACTCTTCGTTA+CGG | + | chr7.3:2481383-2481402 | MS.gene22883:intron | 30.0% |
| ! | TTATTTATTTGGGGTGCTAT+AGG | + | chr7.3:2480719-2480738 | MS.gene22883:intron | 30.0% |
| ! | TTTAGAGAAAACCTCCATTT+TGG | - | chr7.3:2478966-2478985 | None:intergenic | 30.0% |
| ! | TTTGGATGTGTTACTGTAAT+AGG | + | chr7.3:2479703-2479722 | MS.gene22883:intron | 30.0% |
| ! | TTTTCCACTAGCTAGATTAT+GGG | + | chr7.3:2480649-2480668 | MS.gene22883:intron | 30.0% |
| !! | AAGCCTTTTAAAAACTGCTT+TGG | + | chr7.3:2481858-2481877 | MS.gene22883:intron | 30.0% |
| !! | ATGGTTGATGAATCTTCAAA+TGG | + | chr7.3:2480352-2480371 | MS.gene22883:CDS | 30.0% |
| !! | CTTGCAAATTTAACTTGGTT+GGG | + | chr7.3:2478700-2478719 | MS.gene22883:intron | 30.0% |
| !! | TCTTGCAAATTTAACTTGGT+TGG | + | chr7.3:2478699-2478718 | MS.gene22883:intron | 30.0% |
| !! | TTTTGCAGGTATTGTTTATC+AGG | + | chr7.3:2482097-2482116 | MS.gene22883:intron | 30.0% |
| !!! | TTAGTCTTTTTTCCTTTCGA+GGG | - | chr7.3:2478318-2478337 | None:intergenic | 30.0% |
| !!! | TTTCTATTTGTTTTGTTCCG+TGG | + | chr7.3:2482169-2482188 | MS.gene22883:intron | 30.0% |
| AAAATACCCTGAGTATGAGA+AGG | - | chr7.3:2479548-2479567 | None:intergenic | 35.0% | |
| AAACTTGATAGAGTGAATCC+GGG | - | chr7.3:2481363-2481382 | None:intergenic | 35.0% | |
| AATAGCAGTATAACTTCAGC+GGG | - | chr7.3:2481631-2481650 | None:intergenic | 35.0% | |
| AATCTAGCCCAAATTCTAAG+AGG | - | chr7.3:2481793-2481812 | None:intergenic | 35.0% | |
| AATTACAAGGTCCAAAATGG+AGG | + | chr7.3:2478952-2478971 | MS.gene22883:intron | 35.0% | |
| ATATCCCATAATCTAGCTAG+TGG | - | chr7.3:2480656-2480675 | None:intergenic | 35.0% | |
| ATGACTGGAAATCTAGAGAA+TGG | + | chr7.3:2481716-2481735 | MS.gene22883:intron | 35.0% | |
| ATGCATAAACAGACTCCTTA+TGG | - | chr7.3:2480495-2480514 | None:intergenic | 35.0% | |
| CAGATATTGCAGATGTAAGT+AGG | - | chr7.3:2479268-2479287 | None:intergenic | 35.0% | |
| CTGATACCCTCTTAGAATTT+GGG | + | chr7.3:2481783-2481802 | MS.gene22883:intron | 35.0% | |
| CTTACATCTGCAATATCTGA+TGG | + | chr7.3:2479269-2479288 | MS.gene22883:CDS | 35.0% | |
| GAATAGCAGTATAACTTCAG+CGG | - | chr7.3:2481632-2481651 | None:intergenic | 35.0% | |
| GACATAGAGATGAGAGAATA+AGG | + | chr7.3:2481440-2481459 | MS.gene22883:intron | 35.0% | |
| GAGAGATTATTAGTCAACCA+CGG | - | chr7.3:2482189-2482208 | None:intergenic | 35.0% | |
| GCACACATAAATTGAAGGAA+CGG | - | chr7.3:2480914-2480933 | None:intergenic | 35.0% | |
| GCTGTCTGTGATTAATAACA+TGG | + | chr7.3:2481665-2481684 | MS.gene22883:intron | 35.0% | |
| GGGTCAGATTATCTATTTAC+TGG | + | chr7.3:2479290-2479309 | MS.gene22883:CDS | 35.0% | |
| GTTAATGATGCAGTTCTTGT+CGG | + | chr7.3:2479846-2479865 | MS.gene22883:CDS | 35.0% | |
| TAAGGAGTCTGTTTATGCAT+TGG | + | chr7.3:2480495-2480514 | MS.gene22883:CDS | 35.0% | |
| TCAAAGAAAGTTAGCTCAAG+AGG | + | chr7.3:2481070-2481089 | MS.gene22883:intron | 35.0% | |
| TCTATCTATAGGTTGTAGGA+AGG | - | chr7.3:2480993-2481012 | None:intergenic | 35.0% | |
| TCTGATACCCTCTTAGAATT+TGG | + | chr7.3:2481782-2481801 | MS.gene22883:intron | 35.0% | |
| TGAAGTTATACTGCTATTCG+TGG | + | chr7.3:2481633-2481652 | MS.gene22883:intron | 35.0% | |
| TTCTCTAGATTTCCAGTCAT+AGG | - | chr7.3:2481716-2481735 | None:intergenic | 35.0% | |
| TTCTTCAGATACAACCCTTA+AGG | + | chr7.3:2479890-2479909 | MS.gene22883:CDS | 35.0% | |
| TTTCATTAGCTATGTCACAG+TGG | + | chr7.3:2481914-2481933 | MS.gene22883:intron | 35.0% | |
| ! | ATCTAGCCCAAATTCTAAGA+GGG | - | chr7.3:2481792-2481811 | None:intergenic | 35.0% |
| ! | GAGCTAACTTTCTTTGAGTT+AGG | - | chr7.3:2481067-2481086 | None:intergenic | 35.0% |
| ! | TAGACGTCAATAACCTTTTG+AGG | - | chr7.3:2478786-2478805 | None:intergenic | 35.0% |
| ! | TATACTGCTATTCGTGGTTT+TGG | + | chr7.3:2481639-2481658 | MS.gene22883:intron | 35.0% |
| ! | TATTGACTACTCTTCGTTAC+GGG | + | chr7.3:2481384-2481403 | MS.gene22883:intron | 35.0% |
| ! | TGGCCAAAGCAGTTTTTAAA+AGG | - | chr7.3:2481864-2481883 | None:intergenic | 35.0% |
| ! | TGTGTTACTGTAATAGGACA+TGG | + | chr7.3:2479709-2479728 | MS.gene22883:intron | 35.0% |
| !! | ATGAGCTTTTGTTTGAAGTG+CGG | + | chr7.3:2480617-2480636 | MS.gene22883:intron | 35.0% |
| !! | ATTTTGGCGATATCTCTAGT+TGG | + | chr7.3:2481122-2481141 | MS.gene22883:intron | 35.0% |
| !! | CATTACAGCTGACTTGTTTA+GGG | - | chr7.3:2482062-2482081 | None:intergenic | 35.0% |
| !! | CTGTATTTTTGTGCTAGACA+TGG | + | chr7.3:2479986-2480005 | MS.gene22883:intron | 35.0% |
| !! | TTCTCATACTCAGGGTATTT+TGG | + | chr7.3:2479547-2479566 | MS.gene22883:intron | 35.0% |
| !!! | GGGATTTTAATTCTCTGTGA+TGG | + | chr7.3:2478633-2478652 | MS.gene22883:intron | 35.0% |
| !!! | GTTAGTCTTTTTTCCTTTCG+AGG | - | chr7.3:2478319-2478338 | None:intergenic | 35.0% |
| AACCCCTATGTTGTGAATAG+CGG | + | chr7.3:2481205-2481224 | MS.gene22883:intron | 40.0% | |
| AATTTCTCCTTGTGTGTGCA+CGG | - | chr7.3:2479103-2479122 | None:intergenic | 40.0% | |
| ACCACCATATTGGCCAAAAT+TGG | - | chr7.3:2478561-2478580 | None:intergenic | 40.0% | |
| ACGTAAAAAATACCCTGCAC+CGG | - | chr7.3:2481284-2481303 | None:intergenic | 40.0% | |
| AGAATGGACAAGTACAGGTA+AGG | + | chr7.3:2481732-2481751 | MS.gene22883:intron | 40.0% | |
| AGGACACACAAATGAGAAGA+AGG | + | chr7.3:2481460-2481479 | MS.gene22883:intron | 40.0% | |
| ATAGTACGCAAGTTTGTCGA+AGG | - | chr7.3:2480403-2480422 | None:intergenic | 40.0% | |
| ATATTGGCCAAAATTGGCCA+TGG | - | chr7.3:2478555-2478574 | None:intergenic | 40.0% | |
| ATGTTCCAGATGTTCATTCC+TGG | - | chr7.3:2481171-2481190 | None:intergenic | 40.0% | |
| ATTGACTACTCTTCGTTACG+GGG | + | chr7.3:2481385-2481404 | MS.gene22883:intron | 40.0% | |
| CACTTGCAAATGAATGCAGT+AGG | - | chr7.3:2479000-2479019 | None:intergenic | 40.0% | |
| GAAAGTTAGCTCAAGAGGTT+AGG | + | chr7.3:2481075-2481094 | MS.gene22883:intron | 40.0% | |
| GACACACAAATGAGAAGAAG+GGG | + | chr7.3:2481462-2481481 | MS.gene22883:intron | 40.0% | |
| GACTAATAATCTCTCCTCGT+AGG | + | chr7.3:2482194-2482213 | MS.gene22883:intron | 40.0% | |
| GCCATATGTCTAGTCAATGT+GGG | + | chr7.3:2481880-2481899 | MS.gene22883:intron | 40.0% | |
| GCTAAAGTTTGGTCCTCAAA+AGG | + | chr7.3:2478770-2478789 | MS.gene22883:intron | 40.0% | |
| GGACACACAAATGAGAAGAA+GGG | + | chr7.3:2481461-2481480 | MS.gene22883:intron | 40.0% | |
| GGATATCAATGGCAGGTATA+GGG | + | chr7.3:2478522-2478541 | MS.gene22883:intron | 40.0% | |
| GTTTGTCGAAGGTAGTAAGT+TGG | - | chr7.3:2480392-2480411 | None:intergenic | 40.0% | |
| TACATTCCAATTGCTGCCAA+AGG | + | chr7.3:2480469-2480488 | MS.gene22883:CDS | 40.0% | |
| TAGAGCAATATTGTTGCCTC+TGG | + | chr7.3:2480256-2480275 | MS.gene22883:intron | 40.0% | |
| TAGTGTGCAAGGATATACTG+TGG | - | chr7.3:2480435-2480454 | None:intergenic | 40.0% | |
| TATTCTACACTCACTTTCCC+AGG | + | chr7.3:2481150-2481169 | MS.gene22883:intron | 40.0% | |
| TATTGGCCAAAATTGGCCAT+GGG | - | chr7.3:2478554-2478573 | None:intergenic | 40.0% | |
| TCATTCTACAAACCTTCCAG+TGG | - | chr7.3:2480832-2480851 | None:intergenic | 40.0% | |
| TCTAGAGAATGGACAAGTAC+AGG | + | chr7.3:2481727-2481746 | MS.gene22883:intron | 40.0% | |
| TGCACACTACTCAAACTCAA+GGG | + | chr7.3:2480446-2480465 | MS.gene22883:CDS | 40.0% | |
| TGTTCCAGATGTTCATTCCT+GGG | - | chr7.3:2481170-2481189 | None:intergenic | 40.0% | |
| TTGAGTTTGAGTAGTGTGCA+AGG | - | chr7.3:2480446-2480465 | None:intergenic | 40.0% | |
| TTGCACACTACTCAAACTCA+AGG | + | chr7.3:2480445-2480464 | MS.gene22883:CDS | 40.0% | |
| TTGTGCAGGCATAAATTGTC+TGG | + | chr7.3:2479241-2479260 | MS.gene22883:CDS | 40.0% | |
| ! | GAAGGGGAAAGATGATAATG+TGG | + | chr7.3:2481478-2481497 | MS.gene22883:intron | 40.0% |
| ! | GGCACAGAAAAGGTACAATA+TGG | + | chr7.3:2480553-2480572 | MS.gene22883:intron | 40.0% |
| ! | TCCCACATTGACTAGACATA+TGG | - | chr7.3:2481884-2481903 | None:intergenic | 40.0% |
| ! | TGCAAGTGTAGTTTAAGGCA+AGG | + | chr7.3:2479012-2479031 | MS.gene22883:intron | 40.0% |
| ! | TGTTTTCTACAGCATTGTGC+AGG | + | chr7.3:2479227-2479246 | MS.gene22883:intron | 40.0% |
| ! | TTCATGTTTAGCGGGTATGA+AGG | - | chr7.3:2479746-2479765 | None:intergenic | 40.0% |
| !! | ATGGCCAATTTTGGCCAATA+TGG | + | chr7.3:2478554-2478573 | MS.gene22883:intron | 40.0% |
| !! | GCATTACAGCTGACTTGTTT+AGG | - | chr7.3:2482063-2482082 | None:intergenic | 40.0% |
| !! | GCGTGAGAGGTATTGTTATT+GGG | - | chr7.3:2481694-2481713 | None:intergenic | 40.0% |
| !! | TTTTGGCCTTCTCATACTCA+GGG | + | chr7.3:2479539-2479558 | MS.gene22883:intron | 40.0% |
| !! | TTTTTGGCCTTCTCATACTC+AGG | + | chr7.3:2479538-2479557 | MS.gene22883:intron | 40.0% |
| !!! | TGCAGGGTATTTTTTACGTG+CGG | + | chr7.3:2481285-2481304 | MS.gene22883:intron | 40.0% |
| AACAGACTCCTTATGGCCTT+TGG | - | chr7.3:2480488-2480507 | None:intergenic | 45.0% | |
| AAGGTCTTCTGCGATGTGAA+AGG | + | chr7.3:2481258-2481277 | MS.gene22883:intron | 45.0% | |
| AATCGATCCACCTTCATCCA+TGG | - | chr7.3:2480521-2480540 | None:intergenic | 45.0% | |
| AATCTCTCCTCGTAGGCTTT+GGG | + | chr7.3:2482201-2482220 | MS.gene22883:intron | 45.0% | |
| AATTGCTGCCAAAGGCCATA+AGG | + | chr7.3:2480477-2480496 | MS.gene22883:CDS | 45.0% | |
| ACATGGAATGCTTTGTCCAC+TGG | + | chr7.3:2480003-2480022 | MS.gene22883:CDS | 45.0% | |
| AGCAATATTGTTGCCTCTGG+TGG | + | chr7.3:2480259-2480278 | MS.gene22883:CDS | 45.0% | |
| AGGGCACACAGATAACATCA+GGG | + | chr7.3:2480791-2480810 | MS.gene22883:CDS | 45.0% | |
| ATGACTAAATGTTGGGGTGC+TGG | - | chr7.3:2482290-2482309 | None:intergenic | 45.0% | |
| ATGAGAAGGCCAAAAACTGC+AGG | - | chr7.3:2479534-2479553 | None:intergenic | 45.0% | |
| ATGTTGTCAAATATCGCCCG+TGG | + | chr7.3:2478498-2478517 | MS.gene22883:intron | 45.0% | |
| ATTTCTCCTTGTGTGTGCAC+GGG | - | chr7.3:2479102-2479121 | None:intergenic | 45.0% | |
| CATACACCATCCACAACACT+CGG | + | chr7.3:2478661-2478680 | MS.gene22883:intron | 45.0% | |
| CGGATATCAATGGCAGGTAT+AGG | + | chr7.3:2478521-2478540 | MS.gene22883:intron | 45.0% | |
| CTATTTACTGGAAGCCGTGA+TGG | + | chr7.3:2479302-2479321 | MS.gene22883:CDS | 45.0% | |
| CTCTAAGTGCAGTGATGCTA+TGG | + | chr7.3:2480333-2480352 | MS.gene22883:CDS | 45.0% | |
| CTTTCCCAGGAATGAACATC+TGG | + | chr7.3:2481163-2481182 | MS.gene22883:intron | 45.0% | |
| CTTTGAATCTCACGTGGACT+GGG | + | chr7.3:2479376-2479395 | MS.gene22883:CDS | 45.0% | |
| GAACGACTCTGATGACACAA+AGG | + | chr7.3:2478348-2478367 | MS.gene22883:CDS | 45.0% | |
| GCTATAGGTTGTACGTGTCT+GGG | + | chr7.3:2480734-2480753 | MS.gene22883:intron | 45.0% | |
| GGCCATATGTCTAGTCAATG+TGG | + | chr7.3:2481879-2481898 | MS.gene22883:intron | 45.0% | |
| GGTCGCACAATAACAGAGTT+AGG | + | chr7.3:2481753-2481772 | MS.gene22883:intron | 45.0% | |
| TAACATCAGGGCTCTACTTC+TGG | + | chr7.3:2480803-2480822 | MS.gene22883:CDS | 45.0% | |
| TAATCTCTCCTCGTAGGCTT+TGG | + | chr7.3:2482200-2482219 | MS.gene22883:intron | 45.0% | |
| TACTTCTGGATTCCACTGGA+AGG | + | chr7.3:2480817-2480836 | MS.gene22883:CDS | 45.0% | |
| TGATGGCAGGCTAAAACGAT+GGG | + | chr7.3:2479319-2479338 | MS.gene22883:CDS | 45.0% | |
| TGCTACCTTTGAATCTCACG+TGG | + | chr7.3:2479370-2479389 | MS.gene22883:CDS | 45.0% | |
| TGCTATAGGTTGTACGTGTC+TGG | + | chr7.3:2480733-2480752 | MS.gene22883:intron | 45.0% | |
| TGTCCACTGGAACTTGTGTT+AGG | + | chr7.3:2480016-2480035 | MS.gene22883:CDS | 45.0% | |
| TGTCCTAACACAAGTTCCAG+TGG | - | chr7.3:2480022-2480041 | None:intergenic | 45.0% | |
| TTATGGCCTTTGGCAGCAAT+TGG | - | chr7.3:2480478-2480497 | None:intergenic | 45.0% | |
| TTTCCTGGTCAGAAACGTGA+AGG | + | chr7.3:2481418-2481437 | MS.gene22883:intron | 45.0% | |
| ! | AAGGGCACACAGATAACATC+AGG | + | chr7.3:2480790-2480809 | MS.gene22883:CDS | 45.0% |
| ! | ACATGCTGGTTGGTATGACA+CGG | + | chr7.3:2478612-2478631 | MS.gene22883:intron | 45.0% |
| ! | GTCTGTTTATGCATTGGCCA+TGG | + | chr7.3:2480501-2480520 | MS.gene22883:CDS | 45.0% |
| ! | TATGCATTGGCCATGGATGA+AGG | + | chr7.3:2480508-2480527 | MS.gene22883:CDS | 45.0% |
| ! | TTATGAACTGCCGAGTGTTG+TGG | - | chr7.3:2478674-2478693 | None:intergenic | 45.0% |
| ! | TTTTAACCCGTGCACACACA+AGG | + | chr7.3:2479093-2479112 | MS.gene22883:intron | 45.0% |
| !! | ATCGTTTTAGCCTGCCATCA+CGG | - | chr7.3:2479319-2479338 | None:intergenic | 45.0% |
| !! | GCATACACTCTGACTTGTTG+AGG | + | chr7.3:2480575-2480594 | MS.gene22883:intron | 45.0% |
| !! | GCCAATTTTGGCCAATATGG+TGG | + | chr7.3:2478557-2478576 | MS.gene22883:intron | 45.0% |
| !! | GGCGTGAGAGGTATTGTTAT+TGG | - | chr7.3:2481695-2481714 | None:intergenic | 45.0% |
| !! | TCACCTCTTGAGCTAGCTTT+GGG | - | chr7.3:2481829-2481848 | None:intergenic | 45.0% |
| !! | TTTATTTATTTATTTATTTG+GGG | + | chr7.3:2480710-2480729 | MS.gene22883:intron | 5.0% |
| !!! | CTTTTATTTATTTATTTATT+TGG | + | chr7.3:2480708-2480727 | MS.gene22883:intron | 5.0% |
| AAGGCCAAAAACTGCAGGTG+GGG | - | chr7.3:2479529-2479548 | None:intergenic | 50.0% | |
| ACACAAAAACCTCCCCACCA+AGG | - | chr7.3:2480285-2480304 | None:intergenic | 50.0% | |
| AGAAGGCCAAAAACTGCAGG+TGG | - | chr7.3:2479531-2479550 | None:intergenic | 50.0% | |
| AGACCTTGTAGTGGTCGTGA+TGG | - | chr7.3:2481332-2481351 | None:intergenic | 50.0% | |
| ATACCTCTCACGCCTATGAC+TGG | + | chr7.3:2481701-2481720 | MS.gene22883:intron | 50.0% | |
| ATAGAGTGAATCCGGGAGGA+GGG | - | chr7.3:2481356-2481375 | None:intergenic | 50.0% | |
| CAAAGCTAGCTCAAGAGGTG+AGG | + | chr7.3:2481828-2481847 | MS.gene22883:intron | 50.0% | |
| CAATTCAACTCGCCCTCGAA+AGG | + | chr7.3:2478303-2478322 | MS.gene22883:CDS | 50.0% | |
| CCAGTCCACGTGAGATTCAA+AGG | - | chr7.3:2479378-2479397 | None:intergenic | 50.0% | |
| CCCGCCATAATCCGATATGA+CGG | + | chr7.3:2478585-2478604 | MS.gene22883:intron | 50.0% | |
| CCGTCATATCGGATTATGGC+GGG | - | chr7.3:2478588-2478607 | None:intergenic | 50.0% | |
| CCTATATCCCAAAGCCTACG+AGG | - | chr7.3:2482211-2482230 | None:intergenic | 50.0% | |
| CCTTTGAATCTCACGTGGAC+TGG | + | chr7.3:2479375-2479394 | MS.gene22883:CDS | 50.0% | |
| CGCCGCTATTCACAACATAG+GGG | - | chr7.3:2481210-2481229 | None:intergenic | 50.0% | |
| CTTGATAGAGTGAATCCGGG+AGG | - | chr7.3:2481360-2481379 | None:intergenic | 50.0% | |
| GAAGGCCAAAAACTGCAGGT+GGG | - | chr7.3:2479530-2479549 | None:intergenic | 50.0% | |
| GACCTTGTAGTGGTCGTGAT+GGG | - | chr7.3:2481331-2481350 | None:intergenic | 50.0% | |
| GCATCACTGCACTTAGAGAC+TGG | - | chr7.3:2480331-2480350 | None:intergenic | 50.0% | |
| GCCGTCATATCGGATTATGG+CGG | - | chr7.3:2478589-2478608 | None:intergenic | 50.0% | |
| GCGATCACGGAGCAAAATCA+AGG | + | chr7.3:2481239-2481258 | MS.gene22883:intron | 50.0% | |
| GCGCCGCTATTCACAACATA+GGG | - | chr7.3:2481211-2481230 | None:intergenic | 50.0% | |
| GCTCTACTTCTGGATTCCAC+TGG | + | chr7.3:2480813-2480832 | MS.gene22883:CDS | 50.0% | |
| GGCGGGAAATACCACCATAT+TGG | - | chr7.3:2478571-2478590 | None:intergenic | 50.0% | |
| GTGATGGCAGGCTAAAACGA+TGG | + | chr7.3:2479318-2479337 | MS.gene22883:CDS | 50.0% | |
| GTGTCATACCAACCAGCATG+TGG | - | chr7.3:2478613-2478632 | None:intergenic | 50.0% | |
| GTGTTGTGGATGGTGTATGG+CGG | - | chr7.3:2478660-2478679 | None:intergenic | 50.0% | |
| TCTTCTGCGATGTGAAAGGC+CGG | + | chr7.3:2481262-2481281 | MS.gene22883:intron | 50.0% | |
| TGCGCCGCTATTCACAACAT+AGG | - | chr7.3:2481212-2481231 | None:intergenic | 50.0% | |
| TGTCCTTCACGTTTCTGACC+AGG | - | chr7.3:2481424-2481443 | None:intergenic | 50.0% | |
| TGTCTCTGGTGGCACAGAAA+AGG | + | chr7.3:2480543-2480562 | MS.gene22883:CDS | 50.0% | |
| TTGTCAAATATCGCCCGTGG+CGG | + | chr7.3:2478501-2478520 | MS.gene22883:intron | 50.0% | |
| TTTCCAGTCATAGGCGTGAG+AGG | - | chr7.3:2481707-2481726 | None:intergenic | 50.0% | |
| ! | CATGCTGGTTGGTATGACAC+GGG | + | chr7.3:2478613-2478632 | MS.gene22883:intron | 50.0% |
| ! | CGAGTGTTGTGGATGGTGTA+TGG | - | chr7.3:2478663-2478682 | None:intergenic | 50.0% |
| ! | CTATCGCCCATGGCCAATTT+TGG | + | chr7.3:2478545-2478564 | MS.gene22883:intron | 50.0% |
| ! | CTCACCTCTTGAGCTAGCTT+TGG | - | chr7.3:2481830-2481849 | None:intergenic | 50.0% |
| ! | GGATCGATTCTTGTCTCTGG+TGG | + | chr7.3:2480532-2480551 | MS.gene22883:CDS | 50.0% |
| ! | GGTGGATCGATTCTTGTCTC+TGG | + | chr7.3:2480529-2480548 | MS.gene22883:CDS | 50.0% |
| ! | TGGTGGGGAGGTTTTTGTGT+GGG | + | chr7.3:2480285-2480304 | MS.gene22883:CDS | 50.0% |
| ! | TTGGTGGGGAGGTTTTTGTG+TGG | + | chr7.3:2480284-2480303 | MS.gene22883:CDS | 50.0% |
| !! | ACCTCTTGAGCTAGCTTTGG+GGG | - | chr7.3:2481827-2481846 | None:intergenic | 50.0% |
| !! | CACCTCTTGAGCTAGCTTTG+GGG | - | chr7.3:2481828-2481847 | None:intergenic | 50.0% |
| !! | CCTCGTAGGCTTTGGGATAT+AGG | + | chr7.3:2482208-2482227 | MS.gene22883:intron | 50.0% |
| !!! | CATTTTTTCCAGCTGCTGCG+AGG | - | chr7.3:2480074-2480093 | None:intergenic | 50.0% |
| AAAACGATGGGCGCTAGCTG+AGG | + | chr7.3:2479331-2479350 | MS.gene22883:CDS | 55.0% | |
| ACCCCCAAAGCTAGCTCAAG+AGG | + | chr7.3:2481823-2481842 | MS.gene22883:intron | 55.0% | |
| AGCATGTGGCGCCGTCATAT+CGG | - | chr7.3:2478599-2478618 | None:intergenic | 55.0% | |
| AGGCCAAAAACTGCAGGTGG+GGG | - | chr7.3:2479528-2479547 | None:intergenic | 55.0% | |
| AGGTATAGGGCTATCGCCCA+TGG | + | chr7.3:2478535-2478554 | MS.gene22883:intron | 55.0% | |
| ATTGTTGCCTCTGGTGGCCT+TGG | + | chr7.3:2480265-2480284 | MS.gene22883:CDS | 55.0% | |
| CCTGCCATTGATATCCGCCA+CGG | - | chr7.3:2478518-2478537 | None:intergenic | 55.0% | |
| CTGCCATTGATATCCGCCAC+GGG | - | chr7.3:2478517-2478536 | None:intergenic | 55.0% | |
| CTTAGAGACTGGAGCAAGCG+CGG | - | chr7.3:2480320-2480339 | None:intergenic | 55.0% | |
| GAGGAGGGAAGACCTTGTAG+TGG | - | chr7.3:2481341-2481360 | None:intergenic | 55.0% | |
| GATAGAGTGAATCCGGGAGG+AGG | - | chr7.3:2481357-2481376 | None:intergenic | 55.0% | |
| GGCGCCGTCATATCGGATTA+TGG | - | chr7.3:2478592-2478611 | None:intergenic | 55.0% | |
| GTCCCATCACGACCACTACA+AGG | + | chr7.3:2481326-2481345 | MS.gene22883:intron | 55.0% | |
| TACAAGGTCTTCCCTCCTCC+CGG | + | chr7.3:2481342-2481361 | MS.gene22883:intron | 55.0% | |
| TACGTGCGGCAATCGTAGAC+TGG | + | chr7.3:2481299-2481318 | MS.gene22883:intron | 55.0% | |
| TTACTGGAAGCCGTGATGGC+AGG | + | chr7.3:2479306-2479325 | MS.gene22883:CDS | 55.0% | |
| ! | CGTGTCTGGGACACAAGATC+AGG | + | chr7.3:2480747-2480766 | MS.gene22883:CDS | 55.0% |
| ! | GAACTGCCGAGTGTTGTGGA+TGG | - | chr7.3:2478670-2478689 | None:intergenic | 55.0% |
| ! | GCATTGGCCATGGATGAAGG+TGG | + | chr7.3:2480511-2480530 | MS.gene22883:CDS | 55.0% |
| AAAACTGCAGGTGGGGGGAC+TGG | - | chr7.3:2479522-2479541 | None:intergenic | 60.0% | |
| AAACTGCAGGTGGGGGGACT+GGG | - | chr7.3:2479521-2479540 | None:intergenic | 60.0% | |
| ATGCACCGCGTGGCTAGTAC+GGG | + | chr7.3:2478271-2478290 | MS.gene22883:CDS | 60.0% | |
| CGATGTGAAAGGCCGGTGCA+GGG | + | chr7.3:2481269-2481288 | MS.gene22883:intron | 60.0% | |
| GATATGACGGCGCCACATGC+TGG | + | chr7.3:2478598-2478617 | MS.gene22883:intron | 60.0% | |
| GGCCAAAAACTGCAGGTGGG+GGG | - | chr7.3:2479527-2479546 | None:intergenic | 60.0% | |
| GGCGCAATAGCACGCGATCA+CGG | + | chr7.3:2481226-2481245 | MS.gene22883:intron | 60.0% | |
| GTTACTTGCCTCGCAGCAGC+TGG | + | chr7.3:2480063-2480082 | MS.gene22883:CDS | 60.0% | |
| ! | GTCCCCCCACCTGCAGTTTT+TGG | + | chr7.3:2479522-2479541 | MS.gene22883:intron | 60.0% |
| ! | TTGCCTCTGGTGGCCTTGGT+GGG | + | chr7.3:2480269-2480288 | MS.gene22883:CDS | 60.0% |
| !! | CCGTGGCGGATATCAATGGC+AGG | + | chr7.3:2478515-2478534 | MS.gene22883:intron | 60.0% |
| !! | CGGGGCTAGCTTGTGTTTCC+TGG | + | chr7.3:2481403-2481422 | MS.gene22883:intron | 60.0% |
| !! | TCGCCCGTGGCGGATATCAA+TGG | + | chr7.3:2478511-2478530 | MS.gene22883:intron | 60.0% |
| AACTGCAGGTGGGGGGACTG+GGG | - | chr7.3:2479520-2479539 | None:intergenic | 65.0% | |
| CGTTGCCCGTACTAGCCACG+CGG | - | chr7.3:2478279-2478298 | None:intergenic | 65.0% | |
| GCGATGTGAAAGGCCGGTGC+AGG | + | chr7.3:2481268-2481287 | MS.gene22883:intron | 65.0% | |
| TGACGGCGCCACATGCTGGT+TGG | + | chr7.3:2478602-2478621 | MS.gene22883:intron | 65.0% | |
| ! | GTTGCCTCTGGTGGCCTTGG+TGG | + | chr7.3:2480268-2480287 | MS.gene22883:CDS | 65.0% |
| ! | TGCCTCTGGTGGCCTTGGTG+GGG | + | chr7.3:2480270-2480289 | MS.gene22883:CDS | 65.0% |
| CTCCCCACCAAGGCCACCAG+AGG | - | chr7.3:2480275-2480294 | None:intergenic | 70.0% | |
| ! | CTCTGGTGGCCTTGGTGGGG+AGG | + | chr7.3:2480273-2480292 | MS.gene22883:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 2478271 | 2482336 | 2478271 | ID=MS.gene22883 |
| chr7.3 | mRNA | 2478271 | 2482336 | 2478271 | ID=MS.gene22883.t1;Parent=MS.gene22883 |
| chr7.3 | exon | 2478271 | 2478369 | 2478271 | ID=MS.gene22883.t1.exon1;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2478271 | 2478369 | 2478271 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2479239 | 2479397 | 2479239 | ID=MS.gene22883.t1.exon2;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2479239 | 2479397 | 2479239 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2479846 | 2479911 | 2479846 | ID=MS.gene22883.t1.exon3;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2479846 | 2479911 | 2479846 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2480003 | 2480092 | 2480003 | ID=MS.gene22883.t1.exon4;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2480003 | 2480092 | 2480003 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2480259 | 2480564 | 2480259 | ID=MS.gene22883.t1.exon5;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2480259 | 2480564 | 2480259 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2480741 | 2480838 | 2480741 | ID=MS.gene22883.t1.exon6;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2480741 | 2480838 | 2480741 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2482105 | 2482140 | 2482105 | ID=MS.gene22883.t1.exon7;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2482105 | 2482140 | 2482105 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| chr7.3 | exon | 2482216 | 2482336 | 2482216 | ID=MS.gene22883.t1.exon8;Parent=MS.gene22883.t1 |
| chr7.3 | CDS | 2482216 | 2482336 | 2482216 | ID=cds.MS.gene22883.t1;Parent=MS.gene22883.t1 |
| Gene Sequence |
| Protein sequence |
