Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23029.t1 | XP_013450324.1 | 93.1 | 217 | 13 | 1 | 5 | 219 | 70 | 286 | 1.20E-109 | 406 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23029.t1 | O23044 | 56.2 | 217 | 89 | 4 | 5 | 216 | 71 | 286 | 2.6e-60 | 233.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23029.t1 | G8A179 | 93.1 | 217 | 13 | 1 | 5 | 219 | 70 | 286 | 8.7e-110 | 406.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053406 | MS.gene23029 | 0.80149 | 8.79E-49 | -1.69E-46 |
MS.gene056076 | MS.gene23029 | 0.802654 | 5.06E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23029.t1 | MTR_7g107520 | 93.088 | 217 | 13 | 1 | 5 | 219 | 70 | 286 | 1.12e-147 | 414 |
MS.gene23029.t1 | MTR_4g046713 | 54.460 | 213 | 92 | 3 | 5 | 212 | 72 | 284 | 1.39e-76 | 234 |
MS.gene23029.t1 | MTR_2g088770 | 55.760 | 217 | 90 | 4 | 5 | 216 | 71 | 286 | 9.49e-75 | 229 |
MS.gene23029.t1 | MTR_8g075100 | 46.479 | 213 | 109 | 3 | 5 | 213 | 71 | 282 | 4.20e-62 | 197 |
MS.gene23029.t1 | MTR_5g022870 | 48.165 | 218 | 106 | 5 | 5 | 217 | 68 | 283 | 1.10e-61 | 196 |
MS.gene23029.t1 | MTR_1g025980 | 46.479 | 213 | 109 | 3 | 5 | 213 | 69 | 280 | 6.09e-61 | 194 |
MS.gene23029.t1 | MTR_3g092990 | 50.000 | 210 | 99 | 4 | 1 | 204 | 56 | 265 | 8.39e-60 | 191 |
MS.gene23029.t1 | MTR_3g092990 | 50.242 | 207 | 97 | 4 | 4 | 204 | 70 | 276 | 8.58e-60 | 191 |
MS.gene23029.t1 | MTR_1g038680 | 49.309 | 217 | 101 | 5 | 5 | 212 | 74 | 290 | 4.35e-57 | 184 |
MS.gene23029.t1 | MTR_1g101830 | 46.262 | 214 | 110 | 3 | 5 | 214 | 72 | 284 | 4.64e-57 | 184 |
MS.gene23029.t1 | MTR_2g008710 | 46.698 | 212 | 105 | 4 | 5 | 212 | 72 | 279 | 1.72e-56 | 183 |
MS.gene23029.t1 | MTR_6g027440 | 47.761 | 201 | 96 | 5 | 6 | 202 | 67 | 262 | 9.81e-54 | 176 |
MS.gene23029.t1 | MTR_2g008730 | 46.667 | 195 | 99 | 3 | 22 | 212 | 62 | 255 | 4.12e-53 | 173 |
MS.gene23029.t1 | MTR_4g125940 | 44.976 | 209 | 108 | 4 | 5 | 208 | 18 | 224 | 1.71e-52 | 171 |
MS.gene23029.t1 | MTR_2g029820 | 46.479 | 213 | 107 | 4 | 5 | 211 | 74 | 285 | 2.29e-52 | 173 |
MS.gene23029.t1 | MTR_2g029815 | 46.117 | 206 | 106 | 3 | 5 | 205 | 74 | 279 | 4.91e-52 | 172 |
MS.gene23029.t1 | MTR_4g114210 | 42.925 | 212 | 113 | 4 | 5 | 212 | 66 | 273 | 9.63e-52 | 171 |
MS.gene23029.t1 | MTR_4g095450 | 47.926 | 217 | 100 | 5 | 5 | 213 | 72 | 283 | 1.45e-51 | 170 |
MS.gene23029.t1 | MTR_4g125940 | 44.976 | 209 | 108 | 4 | 5 | 208 | 73 | 279 | 1.75e-51 | 170 |
MS.gene23029.t1 | MTR_5g017860 | 47.907 | 215 | 103 | 6 | 6 | 213 | 73 | 285 | 9.52e-51 | 168 |
MS.gene23029.t1 | MTR_7g029030 | 44.393 | 214 | 108 | 5 | 5 | 212 | 70 | 278 | 6.85e-50 | 166 |
MS.gene23029.t1 | MTR_1g009750 | 46.544 | 217 | 107 | 5 | 5 | 213 | 72 | 287 | 9.74e-50 | 166 |
MS.gene23029.t1 | MTR_2g029830 | 43.810 | 210 | 113 | 3 | 1 | 205 | 1 | 210 | 1.60e-49 | 164 |
MS.gene23029.t1 | MTR_7g093370 | 43.662 | 213 | 112 | 5 | 6 | 211 | 115 | 326 | 2.06e-49 | 166 |
MS.gene23029.t1 | MTR_5g017850 | 48.293 | 205 | 97 | 7 | 6 | 203 | 73 | 275 | 3.50e-49 | 164 |
MS.gene23029.t1 | MTR_1g054205 | 42.723 | 213 | 114 | 5 | 6 | 211 | 70 | 281 | 1.01e-48 | 163 |
MS.gene23029.t1 | MTR_2g029860 | 43.868 | 212 | 114 | 3 | 5 | 211 | 74 | 285 | 1.75e-48 | 163 |
MS.gene23029.t1 | MTR_2g029850 | 44.660 | 206 | 109 | 3 | 5 | 205 | 74 | 279 | 3.42e-48 | 162 |
MS.gene23029.t1 | MTR_2g029830 | 43.602 | 211 | 114 | 3 | 6 | 211 | 74 | 284 | 4.31e-48 | 162 |
MS.gene23029.t1 | MTR_0155s0040 | 42.925 | 212 | 107 | 7 | 5 | 212 | 72 | 273 | 5.18e-48 | 160 |
MS.gene23029.t1 | MTR_1g086320 | 42.396 | 217 | 116 | 4 | 5 | 212 | 75 | 291 | 9.80e-48 | 160 |
MS.gene23029.t1 | MTR_8g062780 | 43.256 | 215 | 115 | 4 | 6 | 213 | 69 | 283 | 1.55e-47 | 160 |
MS.gene23029.t1 | MTR_4g127670 | 44.700 | 217 | 109 | 5 | 5 | 213 | 69 | 282 | 1.69e-47 | 159 |
MS.gene23029.t1 | MTR_5g021060 | 45.933 | 209 | 106 | 4 | 5 | 207 | 75 | 282 | 5.82e-47 | 158 |
MS.gene23029.t1 | MTR_2g029800 | 41.706 | 211 | 118 | 3 | 6 | 211 | 75 | 285 | 8.89e-47 | 159 |
MS.gene23029.t1 | MTR_5g016010 | 43.119 | 218 | 116 | 4 | 5 | 214 | 72 | 289 | 9.14e-47 | 158 |
MS.gene23029.t1 | MTR_1g086490 | 39.732 | 224 | 119 | 4 | 5 | 212 | 75 | 298 | 5.34e-46 | 156 |
MS.gene23029.t1 | MTR_1g077000 | 40.654 | 214 | 113 | 5 | 5 | 214 | 84 | 287 | 6.95e-46 | 155 |
MS.gene23029.t1 | MTR_2g028980 | 42.233 | 206 | 114 | 3 | 5 | 205 | 74 | 279 | 9.01e-46 | 156 |
MS.gene23029.t1 | MTR_7g086820 | 40.376 | 213 | 117 | 5 | 5 | 213 | 65 | 271 | 3.76e-45 | 153 |
MS.gene23029.t1 | MTR_4g087965 | 40.826 | 218 | 120 | 5 | 5 | 213 | 87 | 304 | 7.33e-45 | 153 |
MS.gene23029.t1 | MTR_2g029560 | 41.038 | 212 | 120 | 3 | 5 | 211 | 69 | 280 | 1.23e-44 | 153 |
MS.gene23029.t1 | MTR_2g437770 | 41.014 | 217 | 117 | 5 | 3 | 215 | 93 | 302 | 1.59e-44 | 152 |
MS.gene23029.t1 | MTR_2g040000 | 43.478 | 207 | 110 | 4 | 6 | 207 | 75 | 279 | 2.71e-44 | 151 |
MS.gene23029.t1 | MTR_7g086870 | 40.187 | 214 | 115 | 5 | 5 | 214 | 67 | 271 | 2.93e-44 | 151 |
MS.gene23029.t1 | MTR_2g029730 | 38.866 | 247 | 132 | 4 | 5 | 232 | 70 | 316 | 3.05e-44 | 152 |
MS.gene23029.t1 | MTR_8g076820 | 44.019 | 209 | 110 | 4 | 5 | 207 | 75 | 282 | 3.25e-44 | 151 |
MS.gene23029.t1 | MTR_2g084080 | 41.509 | 212 | 112 | 4 | 6 | 212 | 71 | 275 | 1.12e-43 | 149 |
MS.gene23029.t1 | MTR_1g115900 | 42.723 | 213 | 107 | 6 | 5 | 210 | 72 | 276 | 1.28e-43 | 150 |
MS.gene23029.t1 | MTR_4g133800 | 41.860 | 215 | 114 | 5 | 3 | 213 | 84 | 291 | 1.29e-43 | 150 |
MS.gene23029.t1 | MTR_2g029740 | 42.233 | 206 | 114 | 3 | 5 | 205 | 74 | 279 | 3.20e-43 | 149 |
MS.gene23029.t1 | MTR_4g122640 | 42.922 | 219 | 115 | 6 | 6 | 217 | 84 | 299 | 4.95e-43 | 148 |
MS.gene23029.t1 | MTR_2g084110 | 41.509 | 212 | 112 | 4 | 6 | 212 | 71 | 275 | 7.64e-43 | 147 |
MS.gene23029.t1 | MTR_3g094650 | 41.204 | 216 | 113 | 5 | 6 | 214 | 74 | 282 | 1.32e-42 | 147 |
MS.gene23029.t1 | MTR_2g084010 | 42.857 | 203 | 104 | 4 | 6 | 203 | 71 | 266 | 6.06e-42 | 145 |
MS.gene23029.t1 | MTR_1g090760 | 41.667 | 216 | 116 | 6 | 6 | 212 | 74 | 288 | 9.31e-42 | 145 |
MS.gene23029.t1 | MTR_2g029750 | 41.748 | 206 | 115 | 3 | 5 | 205 | 74 | 279 | 1.30e-41 | 145 |
MS.gene23029.t1 | MTR_1g009750 | 41.784 | 213 | 106 | 5 | 5 | 213 | 72 | 270 | 1.13e-40 | 142 |
MS.gene23029.t1 | MTR_2g084090 | 40.845 | 213 | 113 | 5 | 6 | 212 | 71 | 276 | 1.26e-40 | 142 |
MS.gene23029.t1 | MTR_2g099175 | 39.171 | 217 | 115 | 6 | 6 | 211 | 82 | 292 | 1.62e-40 | 142 |
MS.gene23029.t1 | MTR_3g072190 | 39.252 | 214 | 118 | 4 | 4 | 212 | 3 | 209 | 1.89e-40 | 139 |
MS.gene23029.t1 | MTR_4g083710 | 40.097 | 207 | 110 | 5 | 5 | 203 | 72 | 272 | 3.27e-40 | 140 |
MS.gene23029.t1 | MTR_4g030890 | 39.151 | 212 | 123 | 4 | 6 | 212 | 146 | 356 | 4.70e-40 | 142 |
MS.gene23029.t1 | MTR_7g026990 | 42.326 | 215 | 107 | 6 | 5 | 212 | 76 | 280 | 7.33e-40 | 140 |
MS.gene23029.t1 | MTR_2g084020 | 41.872 | 203 | 106 | 4 | 6 | 203 | 71 | 266 | 8.11e-40 | 139 |
MS.gene23029.t1 | MTR_3g072190 | 39.623 | 212 | 116 | 4 | 6 | 212 | 72 | 276 | 2.35e-39 | 138 |
MS.gene23029.t1 | MTR_4g031140 | 37.559 | 213 | 127 | 4 | 6 | 213 | 74 | 285 | 3.17e-38 | 136 |
MS.gene23029.t1 | MTR_2g084000 | 40.394 | 203 | 109 | 4 | 6 | 203 | 72 | 267 | 4.49e-38 | 135 |
MS.gene23029.t1 | MTR_7g072480 | 38.785 | 214 | 119 | 4 | 5 | 213 | 69 | 275 | 6.70e-38 | 134 |
MS.gene23029.t1 | MTR_5g074710 | 40.777 | 206 | 106 | 6 | 6 | 203 | 71 | 268 | 1.02e-37 | 134 |
MS.gene23029.t1 | MTR_4g074995 | 39.423 | 208 | 97 | 6 | 5 | 203 | 69 | 256 | 1.12e-37 | 134 |
MS.gene23029.t1 | MTR_4g029200 | 39.409 | 203 | 111 | 4 | 5 | 202 | 91 | 286 | 1.27e-37 | 134 |
MS.gene23029.t1 | MTR_7g072510 | 39.706 | 204 | 111 | 4 | 5 | 203 | 65 | 261 | 2.68e-37 | 133 |
MS.gene23029.t1 | MTR_4g029190 | 40.976 | 205 | 107 | 5 | 5 | 202 | 91 | 288 | 2.82e-37 | 133 |
MS.gene23029.t1 | MTR_5g083860 | 38.140 | 215 | 119 | 5 | 6 | 213 | 77 | 284 | 5.65e-37 | 132 |
MS.gene23029.t1 | MTR_6g043240 | 39.070 | 215 | 114 | 7 | 5 | 213 | 87 | 290 | 8.26e-37 | 132 |
MS.gene23029.t1 | MTR_5g014100 | 37.004 | 227 | 135 | 4 | 6 | 224 | 72 | 298 | 1.31e-36 | 131 |
MS.gene23029.t1 | MTR_4g029180 | 39.512 | 205 | 110 | 6 | 6 | 203 | 73 | 270 | 1.48e-36 | 131 |
MS.gene23029.t1 | MTR_2g029910 | 38.967 | 213 | 124 | 4 | 5 | 211 | 75 | 287 | 1.63e-36 | 132 |
MS.gene23029.t1 | MTR_3g094670 | 40.278 | 216 | 115 | 5 | 6 | 214 | 74 | 282 | 1.87e-36 | 131 |
MS.gene23029.t1 | MTR_5g074740 | 40.865 | 208 | 103 | 8 | 6 | 203 | 71 | 268 | 2.79e-36 | 130 |
MS.gene23029.t1 | MTR_1g022970 | 40.088 | 227 | 126 | 5 | 5 | 224 | 91 | 314 | 2.97e-36 | 131 |
MS.gene23029.t1 | MTR_2g077990 | 35.060 | 251 | 126 | 6 | 5 | 219 | 121 | 370 | 3.17e-36 | 132 |
MS.gene23029.t1 | MTR_2g067440 | 35.484 | 248 | 126 | 6 | 5 | 219 | 105 | 351 | 3.29e-36 | 132 |
MS.gene23029.t1 | MTR_3g094630 | 40.278 | 216 | 115 | 5 | 6 | 214 | 74 | 282 | 3.52e-36 | 130 |
MS.gene23029.t1 | MTR_6g043460 | 36.744 | 215 | 122 | 6 | 5 | 213 | 81 | 287 | 3.70e-36 | 130 |
MS.gene23029.t1 | MTR_2g078610 | 36.066 | 244 | 119 | 6 | 5 | 212 | 121 | 363 | 3.71e-36 | 132 |
MS.gene23029.t1 | MTR_5g074860 | 38.498 | 213 | 111 | 7 | 6 | 208 | 75 | 277 | 4.93e-36 | 130 |
MS.gene23029.t1 | MTR_5g074760 | 40.291 | 206 | 107 | 7 | 6 | 203 | 71 | 268 | 5.04e-36 | 130 |
MS.gene23029.t1 | MTR_2g078280 | 35.458 | 251 | 125 | 6 | 5 | 219 | 121 | 370 | 5.10e-36 | 131 |
MS.gene23029.t1 | MTR_4g029170 | 38.318 | 214 | 118 | 6 | 6 | 212 | 73 | 279 | 6.30e-36 | 129 |
MS.gene23029.t1 | MTR_6g043280 | 38.498 | 213 | 116 | 7 | 6 | 212 | 87 | 290 | 6.66e-36 | 130 |
MS.gene23029.t1 | MTR_5g074970 | 38.164 | 207 | 112 | 6 | 6 | 203 | 76 | 275 | 1.48e-35 | 129 |
MS.gene23029.t1 | MTR_3g105790 | 41.860 | 215 | 114 | 5 | 5 | 212 | 70 | 280 | 2.70e-35 | 128 |
MS.gene23029.t1 | MTR_0286s0010 | 40.465 | 215 | 117 | 6 | 6 | 212 | 81 | 292 | 2.19e-34 | 125 |
MS.gene23029.t1 | MTR_6g008075 | 40.465 | 215 | 117 | 6 | 6 | 212 | 81 | 292 | 2.19e-34 | 125 |
MS.gene23029.t1 | MTR_2g008160 | 39.409 | 203 | 113 | 6 | 5 | 202 | 69 | 266 | 3.54e-34 | 125 |
MS.gene23029.t1 | MTR_4g074990 | 37.864 | 206 | 108 | 5 | 5 | 199 | 69 | 265 | 8.76e-34 | 123 |
MS.gene23029.t1 | MTR_3g466200 | 36.408 | 206 | 116 | 6 | 6 | 203 | 71 | 269 | 1.23e-33 | 123 |
MS.gene23029.t1 | MTR_5g049280 | 36.842 | 209 | 122 | 7 | 5 | 205 | 78 | 284 | 1.26e-33 | 124 |
MS.gene23029.t1 | MTR_0147s0010 | 37.321 | 209 | 107 | 4 | 28 | 212 | 133 | 341 | 1.28e-33 | 124 |
MS.gene23029.t1 | MTR_2g067450 | 42.945 | 163 | 87 | 3 | 5 | 161 | 55 | 217 | 3.19e-33 | 122 |
MS.gene23029.t1 | MTR_3g466180 | 39.216 | 204 | 112 | 4 | 6 | 204 | 77 | 273 | 1.59e-32 | 120 |
MS.gene23029.t1 | MTR_3g467600 | 38.350 | 206 | 112 | 6 | 6 | 203 | 73 | 271 | 2.15e-32 | 120 |
MS.gene23029.t1 | MTR_3g105790 | 41.584 | 202 | 110 | 4 | 18 | 212 | 4 | 204 | 3.66e-32 | 118 |
MS.gene23029.t1 | MTR_4g074980 | 37.306 | 193 | 101 | 5 | 5 | 186 | 70 | 253 | 3.29e-31 | 115 |
MS.gene23029.t1 | MTR_1g066380 | 33.480 | 227 | 131 | 7 | 2 | 217 | 1 | 218 | 8.96e-31 | 114 |
MS.gene23029.t1 | MTR_4g132110 | 34.821 | 224 | 126 | 8 | 3 | 215 | 75 | 289 | 1.17e-29 | 113 |
MS.gene23029.t1 | MTR_4g132490 | 34.685 | 222 | 134 | 7 | 5 | 219 | 74 | 291 | 1.34e-29 | 113 |
MS.gene23029.t1 | MTR_4g132110 | 34.061 | 229 | 126 | 8 | 3 | 215 | 75 | 294 | 1.95e-29 | 112 |
MS.gene23029.t1 | MTR_1g066710 | 34.375 | 224 | 127 | 6 | 5 | 217 | 72 | 286 | 2.91e-29 | 112 |
MS.gene23029.t1 | MTR_1g066380 | 33.482 | 224 | 129 | 7 | 5 | 217 | 72 | 286 | 4.33e-29 | 111 |
MS.gene23029.t1 | MTR_4g074980 | 39.766 | 171 | 89 | 5 | 5 | 170 | 70 | 231 | 8.68e-29 | 110 |
MS.gene23029.t1 | MTR_1g066680 | 33.173 | 208 | 123 | 5 | 6 | 204 | 72 | 272 | 1.73e-28 | 110 |
MS.gene23029.t1 | MTR_1g066640 | 32.735 | 223 | 130 | 6 | 6 | 217 | 73 | 286 | 2.04e-28 | 110 |
MS.gene23029.t1 | MTR_5g033470 | 33.636 | 220 | 130 | 8 | 6 | 212 | 119 | 335 | 1.34e-26 | 105 |
MS.gene23029.t1 | MTR_2g029880 | 42.647 | 136 | 66 | 3 | 72 | 205 | 12 | 137 | 2.31e-24 | 96.7 |
MS.gene23029.t1 | MTR_7g086790 | 34.536 | 194 | 102 | 5 | 7 | 196 | 17 | 189 | 1.20e-23 | 94.4 |
MS.gene23029.t1 | MTR_5g074700 | 35.583 | 163 | 90 | 6 | 34 | 189 | 7 | 161 | 8.00e-23 | 92.8 |
MS.gene23029.t1 | MTR_2g008160 | 44.186 | 129 | 63 | 5 | 5 | 128 | 69 | 193 | 4.12e-22 | 90.5 |
MS.gene23029.t1 | MTR_2g077980 | 27.419 | 248 | 140 | 6 | 12 | 219 | 1 | 248 | 6.96e-21 | 89.0 |
MS.gene23029.t1 | MTR_1g089005 | 73.214 | 56 | 15 | 0 | 10 | 65 | 71 | 126 | 3.09e-20 | 84.3 |
MS.gene23029.t1 | MTR_7g107500 | 76.471 | 51 | 12 | 0 | 169 | 219 | 13 | 63 | 3.11e-20 | 82.4 |
MS.gene23029.t1 | MTR_2g008160 | 33.005 | 203 | 91 | 6 | 5 | 202 | 69 | 231 | 4.46e-20 | 87.0 |
MS.gene23029.t1 | MTR_7g072490 | 31.604 | 212 | 83 | 5 | 5 | 213 | 1 | 153 | 1.01e-18 | 81.6 |
MS.gene23029.t1 | MTR_3g072210 | 35.211 | 142 | 83 | 2 | 71 | 210 | 58 | 192 | 1.40e-18 | 82.0 |
MS.gene23029.t1 | MTR_6g048160 | 60.656 | 61 | 21 | 1 | 5 | 65 | 28 | 85 | 4.70e-18 | 76.6 |
MS.gene23029.t1 | MTR_5g074860 | 42.857 | 105 | 54 | 3 | 6 | 104 | 75 | 179 | 6.11e-18 | 80.9 |
MS.gene23029.t1 | MTR_5g058120 | 33.871 | 124 | 69 | 3 | 92 | 213 | 6 | 118 | 3.08e-14 | 70.5 |
MS.gene23029.t1 | MTR_3g072260 | 54.098 | 61 | 27 | 1 | 6 | 65 | 72 | 132 | 3.98e-13 | 65.1 |
MS.gene23029.t1 | MTR_2g078560 | 28.333 | 180 | 97 | 3 | 72 | 219 | 105 | 284 | 4.66e-13 | 67.8 |
MS.gene23029.t1 | MTR_4g114220 | 40.000 | 100 | 39 | 4 | 5 | 96 | 48 | 134 | 1.65e-12 | 63.5 |
MS.gene23029.t1 | MTR_6g071110 | 43.038 | 79 | 35 | 2 | 26 | 104 | 80 | 148 | 3.46e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23029.t1 | AT1G05260 | 56.221 | 217 | 89 | 4 | 5 | 216 | 71 | 286 | 6.87e-78 | 238 |
MS.gene23029.t1 | AT4G11290 | 58.333 | 204 | 79 | 4 | 5 | 202 | 70 | 273 | 9.62e-75 | 229 |
MS.gene23029.t1 | AT3G01190 | 56.132 | 212 | 85 | 5 | 5 | 212 | 71 | 278 | 5.41e-73 | 225 |
MS.gene23029.t1 | AT5G15180 | 53.774 | 212 | 92 | 4 | 5 | 212 | 77 | 286 | 1.00e-72 | 224 |
MS.gene23029.t1 | AT2G39040 | 53.670 | 218 | 92 | 4 | 5 | 213 | 91 | 308 | 1.25e-72 | 225 |
MS.gene23029.t1 | AT1G05240 | 51.174 | 213 | 98 | 4 | 5 | 213 | 71 | 281 | 1.67e-69 | 216 |
MS.gene23029.t1 | AT1G05250 | 51.174 | 213 | 98 | 4 | 5 | 213 | 71 | 281 | 1.67e-69 | 216 |
MS.gene23029.t1 | AT3G21770 | 50.691 | 217 | 101 | 4 | 5 | 216 | 74 | 289 | 1.16e-67 | 212 |
MS.gene23029.t1 | AT5G42180 | 47.170 | 212 | 107 | 3 | 5 | 212 | 68 | 278 | 5.50e-62 | 197 |
MS.gene23029.t1 | AT5G51890 | 46.009 | 213 | 109 | 4 | 5 | 212 | 71 | 282 | 6.51e-57 | 184 |
MS.gene23029.t1 | AT2G24800 | 48.430 | 223 | 102 | 7 | 5 | 219 | 76 | 293 | 3.50e-52 | 172 |
MS.gene23029.t1 | AT5G64120 | 43.779 | 217 | 113 | 5 | 5 | 217 | 80 | 291 | 3.97e-52 | 172 |
MS.gene23029.t1 | AT2G41480 | 40.343 | 233 | 124 | 5 | 5 | 226 | 74 | 302 | 8.37e-51 | 168 |
MS.gene23029.t1 | AT5G14130 | 46.262 | 214 | 107 | 5 | 5 | 212 | 77 | 288 | 1.40e-49 | 165 |
MS.gene23029.t1 | AT4G37530 | 44.444 | 216 | 112 | 4 | 6 | 213 | 73 | 288 | 2.41e-49 | 164 |
MS.gene23029.t1 | AT5G19890 | 44.762 | 210 | 107 | 5 | 6 | 210 | 76 | 281 | 2.48e-49 | 164 |
MS.gene23029.t1 | AT5G67400 | 43.981 | 216 | 113 | 4 | 6 | 213 | 73 | 288 | 3.79e-49 | 164 |
MS.gene23029.t1 | AT5G14130 | 46.262 | 214 | 107 | 5 | 5 | 212 | 118 | 329 | 4.89e-49 | 165 |
MS.gene23029.t1 | AT3G49960 | 44.700 | 217 | 112 | 4 | 6 | 214 | 73 | 289 | 5.39e-49 | 164 |
MS.gene23029.t1 | AT4G37530 | 45.411 | 207 | 105 | 4 | 6 | 204 | 73 | 279 | 5.69e-49 | 162 |
MS.gene23029.t1 | AT4G33420 | 42.991 | 214 | 108 | 5 | 5 | 214 | 82 | 285 | 1.64e-48 | 162 |
MS.gene23029.t1 | AT4G31760 | 45.581 | 215 | 106 | 5 | 5 | 212 | 74 | 284 | 3.83e-48 | 161 |
MS.gene23029.t1 | AT5G64100 | 40.826 | 218 | 118 | 5 | 5 | 218 | 82 | 292 | 5.85e-48 | 161 |
MS.gene23029.t1 | AT5G06720 | 42.453 | 212 | 115 | 4 | 6 | 211 | 78 | 288 | 6.73e-48 | 161 |
MS.gene23029.t1 | AT4G33420 | 42.991 | 214 | 108 | 5 | 5 | 214 | 129 | 332 | 7.19e-48 | 162 |
MS.gene23029.t1 | AT5G22410 | 41.176 | 221 | 113 | 6 | 6 | 214 | 74 | 289 | 2.28e-47 | 159 |
MS.gene23029.t1 | AT4G37520 | 43.056 | 216 | 115 | 4 | 6 | 213 | 73 | 288 | 3.70e-47 | 159 |
MS.gene23029.t1 | AT5G39580 | 41.284 | 218 | 118 | 6 | 5 | 217 | 70 | 282 | 1.06e-46 | 157 |
MS.gene23029.t1 | AT5G64110 | 41.204 | 216 | 122 | 2 | 5 | 218 | 79 | 291 | 1.15e-46 | 157 |
MS.gene23029.t1 | AT4G37520 | 42.991 | 214 | 115 | 4 | 6 | 213 | 73 | 285 | 2.39e-46 | 157 |
MS.gene23029.t1 | AT2G18150 | 41.860 | 215 | 117 | 5 | 5 | 212 | 81 | 294 | 3.50e-46 | 157 |
MS.gene23029.t1 | AT1G71695 | 42.791 | 215 | 110 | 6 | 5 | 212 | 89 | 297 | 3.56e-46 | 157 |
MS.gene23029.t1 | AT2G18140 | 40.465 | 215 | 120 | 5 | 5 | 212 | 80 | 293 | 1.72e-45 | 155 |
MS.gene23029.t1 | AT5G17820 | 40.094 | 212 | 114 | 5 | 5 | 212 | 69 | 271 | 2.32e-45 | 154 |
MS.gene23029.t1 | AT4G36430 | 41.395 | 215 | 118 | 5 | 5 | 212 | 75 | 288 | 2.92e-45 | 154 |
MS.gene23029.t1 | AT2G18980 | 42.857 | 217 | 112 | 5 | 5 | 213 | 70 | 282 | 3.94e-45 | 154 |
MS.gene23029.t1 | AT3G03670 | 39.151 | 212 | 125 | 2 | 5 | 212 | 68 | 279 | 6.41e-45 | 153 |
MS.gene23029.t1 | AT5G66390 | 43.721 | 215 | 113 | 5 | 5 | 212 | 78 | 291 | 6.43e-45 | 153 |
MS.gene23029.t1 | AT5G06730 | 41.981 | 212 | 116 | 4 | 6 | 211 | 79 | 289 | 1.13e-44 | 153 |
MS.gene23029.t1 | AT4G30170 | 41.014 | 217 | 116 | 5 | 5 | 213 | 72 | 284 | 1.27e-44 | 152 |
MS.gene23029.t1 | AT2G38390 | 41.784 | 213 | 118 | 3 | 5 | 211 | 76 | 288 | 1.56e-44 | 152 |
MS.gene23029.t1 | AT5G17820 | 40.094 | 212 | 114 | 5 | 5 | 212 | 122 | 324 | 3.19e-44 | 152 |
MS.gene23029.t1 | AT2G38380 | 41.784 | 213 | 118 | 3 | 5 | 211 | 76 | 288 | 2.45e-43 | 149 |
MS.gene23029.t1 | AT1G49570 | 43.056 | 216 | 113 | 6 | 6 | 212 | 94 | 308 | 4.08e-43 | 149 |
MS.gene23029.t1 | AT3G32980 | 40.376 | 213 | 121 | 3 | 6 | 212 | 77 | 289 | 4.31e-43 | 149 |
MS.gene23029.t1 | AT4G33870 | 36.364 | 242 | 113 | 4 | 5 | 206 | 113 | 353 | 2.58e-42 | 148 |
MS.gene23029.t1 | AT5G19880 | 42.308 | 208 | 112 | 6 | 6 | 205 | 71 | 278 | 2.79e-42 | 146 |
MS.gene23029.t1 | AT3G50990 | 41.667 | 204 | 114 | 3 | 6 | 204 | 87 | 290 | 4.30e-41 | 144 |
MS.gene23029.t1 | AT4G08770 | 39.806 | 206 | 118 | 3 | 6 | 205 | 70 | 275 | 4.73e-41 | 144 |
MS.gene23029.t1 | AT5G05340 | 37.963 | 216 | 120 | 5 | 6 | 214 | 76 | 284 | 8.89e-41 | 142 |
MS.gene23029.t1 | AT2G22420 | 38.739 | 222 | 129 | 5 | 6 | 222 | 69 | 288 | 1.00e-40 | 142 |
MS.gene23029.t1 | AT1G30870 | 38.318 | 214 | 117 | 6 | 6 | 213 | 97 | 301 | 1.14e-40 | 142 |
MS.gene23029.t1 | AT3G49110 | 38.991 | 218 | 127 | 3 | 6 | 217 | 79 | 296 | 1.31e-40 | 142 |
MS.gene23029.t1 | AT4G17690 | 40.930 | 215 | 115 | 5 | 5 | 212 | 71 | 280 | 2.78e-40 | 141 |
MS.gene23029.t1 | AT1G14550 | 38.967 | 213 | 112 | 7 | 5 | 208 | 71 | 274 | 5.94e-40 | 140 |
MS.gene23029.t1 | AT3G28200 | 42.130 | 216 | 110 | 7 | 6 | 213 | 67 | 275 | 7.62e-40 | 139 |
MS.gene23029.t1 | AT5G24070 | 37.209 | 215 | 121 | 5 | 6 | 211 | 83 | 292 | 1.33e-39 | 139 |
MS.gene23029.t1 | AT3G49120 | 38.532 | 218 | 128 | 3 | 6 | 217 | 78 | 295 | 1.43e-39 | 140 |
MS.gene23029.t1 | AT2G43480 | 37.209 | 215 | 121 | 5 | 6 | 211 | 83 | 292 | 2.28e-39 | 139 |
MS.gene23029.t1 | AT1G44970 | 43.415 | 205 | 111 | 3 | 5 | 204 | 90 | 294 | 8.76e-39 | 137 |
MS.gene23029.t1 | AT4G26010 | 37.209 | 215 | 118 | 6 | 5 | 214 | 67 | 269 | 3.02e-38 | 135 |
MS.gene23029.t1 | AT4G26010 | 37.209 | 215 | 118 | 6 | 5 | 214 | 95 | 297 | 5.41e-38 | 135 |
MS.gene23029.t1 | AT4G08780 | 38.835 | 206 | 120 | 3 | 6 | 205 | 70 | 275 | 5.86e-38 | 135 |
MS.gene23029.t1 | AT4G25980 | 36.239 | 218 | 132 | 4 | 5 | 218 | 71 | 285 | 1.61e-37 | 134 |
MS.gene23029.t1 | AT5G40150 | 39.252 | 214 | 118 | 5 | 6 | 212 | 78 | 286 | 6.17e-37 | 132 |
MS.gene23029.t1 | AT1G77100 | 36.866 | 217 | 124 | 6 | 5 | 216 | 69 | 277 | 9.73e-37 | 132 |
MS.gene23029.t1 | AT2G34060 | 37.963 | 216 | 125 | 5 | 5 | 211 | 87 | 302 | 1.25e-36 | 132 |
MS.gene23029.t1 | AT1G68850 | 38.222 | 225 | 117 | 8 | 5 | 213 | 75 | 293 | 1.45e-36 | 131 |
MS.gene23029.t1 | AT1G14540 | 38.278 | 209 | 116 | 6 | 6 | 208 | 67 | 268 | 3.15e-36 | 130 |
MS.gene23029.t1 | AT5G47000 | 38.426 | 216 | 122 | 5 | 5 | 213 | 78 | 289 | 5.41e-36 | 130 |
MS.gene23029.t1 | AT2G35380 | 36.364 | 231 | 139 | 4 | 6 | 228 | 76 | 306 | 6.67e-36 | 130 |
MS.gene23029.t1 | AT1G24110 | 40.092 | 217 | 118 | 6 | 6 | 213 | 68 | 281 | 1.15e-35 | 129 |
MS.gene23029.t1 | AT4G16270 | 36.100 | 241 | 142 | 5 | 6 | 234 | 96 | 336 | 2.00e-35 | 129 |
MS.gene23029.t1 | AT4G21960 | 36.486 | 222 | 125 | 6 | 3 | 215 | 74 | 288 | 3.34e-34 | 125 |
MS.gene23029.t1 | AT1G34510 | 34.112 | 214 | 124 | 5 | 5 | 213 | 67 | 268 | 8.11e-33 | 121 |
MS.gene23029.t1 | AT5G58390 | 36.279 | 215 | 122 | 6 | 6 | 212 | 67 | 274 | 2.17e-32 | 120 |
MS.gene23029.t1 | AT2G35380 | 35.185 | 216 | 132 | 4 | 21 | 228 | 3 | 218 | 2.98e-31 | 115 |
MS.gene23029.t1 | AT5G58400 | 35.648 | 216 | 122 | 7 | 6 | 212 | 76 | 283 | 2.45e-29 | 112 |
MS.gene23029.t1 | AT2G37130 | 33.333 | 225 | 129 | 7 | 5 | 217 | 44 | 259 | 3.89e-27 | 105 |
MS.gene23029.t1 | AT2G37130 | 33.333 | 225 | 129 | 7 | 5 | 217 | 75 | 290 | 7.11e-27 | 105 |
MS.gene23029.t1 | AT3G17070 | 33.482 | 224 | 134 | 8 | 5 | 217 | 83 | 302 | 7.91e-26 | 103 |
MS.gene23029.t1 | AT5G39580 | 46.341 | 123 | 58 | 4 | 5 | 123 | 70 | 188 | 1.46e-25 | 100 |
MS.gene23029.t1 | AT3G17070 | 32.889 | 225 | 136 | 8 | 4 | 217 | 19 | 239 | 1.81e-25 | 101 |
MS.gene23029.t1 | AT2G24800 | 48.333 | 120 | 55 | 3 | 5 | 120 | 76 | 192 | 1.61e-22 | 92.8 |
MS.gene23029.t1 | AT4G25980 | 40.164 | 122 | 66 | 4 | 5 | 122 | 116 | 234 | 3.56e-18 | 81.6 |
Find 52 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCATATATGGTTGCGTTTC+AGG | 0.105079 | 7.2:-6937728 | None:intergenic |
TCAAATGTTGTTGAGCTATT+TGG | 0.173041 | 7.2:+6936845 | None:intergenic |
CATGACTTGGTTGTATTATC+AGG | 0.207951 | 7.2:-6937242 | MS.gene23029:intron |
CAATCTAGAAACATTGTTAA+TGG | 0.253287 | 7.2:-6936749 | MS.gene23029:CDS |
AAGCCTGCTAATGATAAATT+AGG | 0.273981 | 7.2:+6937643 | None:intergenic |
GATTAGGGCTTCAATGCTTC+TGG | 0.289264 | 7.2:+6937380 | None:intergenic |
GTCACTTAGGCCTTGGCATT+TGG | 0.297824 | 7.2:+6936892 | None:intergenic |
TTCAAGAAATTTGCATAAGT+TGG | 0.318870 | 7.2:+6936917 | None:intergenic |
AATCTAGAAACATTGTTAAT+GGG | 0.340860 | 7.2:-6936748 | MS.gene23029:intron |
AGAAGACATAAAAGAAGCTT+TGG | 0.382183 | 7.2:-6937611 | MS.gene23029:CDS |
TCAGCACATGATACAATTCC+TGG | 0.383508 | 7.2:+6937577 | None:intergenic |
AAGGTGCTGGAATATTGATT+AGG | 0.388624 | 7.2:+6937364 | None:intergenic |
AACAATGTTTCTAGATTGCT+TGG | 0.397011 | 7.2:+6936754 | None:intergenic |
AGGTGCTGGAATATTGATTA+GGG | 0.399370 | 7.2:+6937365 | None:intergenic |
GCATATATGGTTGCGTTTCA+GGG | 0.401151 | 7.2:-6937727 | None:intergenic |
GTCTGAGCTGAGTGATGTTA+TGG | 0.410714 | 7.2:+6937340 | None:intergenic |
AGCAACGTGGGAAGTGCTTA+CGG | 0.416975 | 7.2:-6937424 | MS.gene23029:CDS |
TTTATAGGAGCACACACAAT+TGG | 0.421672 | 7.2:-6937016 | MS.gene23029:intron |
ATTGCAACTTATTCAGCAAC+AGG | 0.429672 | 7.2:-6936985 | MS.gene23029:CDS |
ATTCCTAATTTATCATTAGC+AGG | 0.434054 | 7.2:-6937646 | MS.gene23029:CDS |
GAATCTATTGGCAGGGTTGA+TGG | 0.439060 | 7.2:-6935720 | MS.gene23029:CDS |
TGGTGGTGTCACTTAGGCCT+TGG | 0.470093 | 7.2:+6936885 | None:intergenic |
GGCAGGGTTGATGGTGAAGA+TGG | 0.476357 | 7.2:-6935711 | MS.gene23029:CDS |
GCAACGTGGGAAGTGCTTAC+GGG | 0.476545 | 7.2:-6937423 | MS.gene23029:CDS |
AGACATAAAAGAAGCTTTGG+AGG | 0.490687 | 7.2:-6937608 | MS.gene23029:CDS |
TGCTGGTAACACTGCGGAGA+AGG | 0.493705 | 7.2:-6937674 | MS.gene23029:CDS |
AAAGCTTACTCTTCATGACT+TGG | 0.493798 | 7.2:-6937255 | MS.gene23029:CDS |
CTGTTGTGGTGGTGTCACTT+AGG | 0.496811 | 7.2:+6936879 | None:intergenic |
ATGGATTGTGATGAATCTAT+TGG | 0.505518 | 7.2:-6935732 | MS.gene23029:CDS |
GTTTCAGGGGTGTGACGCAT+CGG | 0.508181 | 7.2:-6937713 | MS.gene23029:CDS |
GCATAAGTTGGATTCAGAGA+TGG | 0.521194 | 7.2:+6936929 | None:intergenic |
GCTTTGGAGGAGAAATGTCC+AGG | 0.528854 | 7.2:-6937595 | MS.gene23029:CDS |
TGGATCCATCTCTACTGTTG+TGG | 0.535692 | 7.2:+6936865 | None:intergenic |
TCCTGTACTTCTACAAAACA+AGG | 0.536222 | 7.2:-6936810 | MS.gene23029:CDS |
CACCACCACAACAGTAGAGA+TGG | 0.539448 | 7.2:-6936870 | MS.gene23029:CDS |
CTCCGCAGTGTTACCAGCAG+TGG | 0.544816 | 7.2:+6937678 | None:intergenic |
ATCCATCTCTACTGTTGTGG+TGG | 0.572153 | 7.2:+6936868 | None:intergenic |
TGCTAATGATAAATTAGGAA+TGG | 0.579765 | 7.2:+6937648 | None:intergenic |
CATATATGGTTGCGTTTCAG+GGG | 0.582416 | 7.2:-6937726 | None:intergenic |
GTGATGTTATGGAAAGGTGC+TGG | 0.588441 | 7.2:+6937351 | None:intergenic |
AGGGTTGATGGTGAAGATGG+AGG | 0.588448 | 7.2:-6935708 | MS.gene23029:CDS |
GTGCTTACGGGTAGAAGAGA+TGG | 0.590073 | 7.2:-6937411 | MS.gene23029:CDS |
TTCTTGAAGACCAAATGCCA+AGG | 0.601738 | 7.2:-6936902 | MS.gene23029:CDS |
ATTGTGATGAATCTATTGGC+AGG | 0.618538 | 7.2:-6935728 | MS.gene23029:CDS |
TTGTGATGAATCTATTGGCA+GGG | 0.643573 | 7.2:-6935727 | MS.gene23029:CDS |
GTTTAATGATAAAGCAACGT+GGG | 0.643577 | 7.2:-6937436 | MS.gene23029:CDS |
GGAGCACACACAATTGGAGT+AGG | 0.649757 | 7.2:-6937010 | MS.gene23029:CDS |
ATGTGCTGATATACTCACAT+TGG | 0.669867 | 7.2:-6937563 | MS.gene23029:CDS |
CCTGTACTTCTACAAAACAA+GGG | 0.691319 | 7.2:-6936809 | MS.gene23029:CDS |
AGCTGAGTGATGTTATGGAA+AGG | 0.700700 | 7.2:+6937345 | None:intergenic |
AGTTTAATGATAAAGCAACG+TGG | 0.776571 | 7.2:-6937437 | MS.gene23029:CDS |
GTCCACTGCTGGTAACACTG+CGG | 0.786302 | 7.2:-6937680 | MS.gene23029:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATATGAATGAATAAATC+AGG | + | chr7.2:6935950-6935969 | None:intergenic | 15.0% |
!! | AATTAAATGTAAGAAATCTA+TGG | + | chr7.2:6937199-6937218 | None:intergenic | 15.0% |
!! | ACTAAAAAAATTTGAATCTA+TGG | - | chr7.2:6937283-6937302 | MS.gene23029:intron | 15.0% |
!! | TAGGAATATGTATAAATTAA+TGG | + | chr7.2:6935915-6935934 | None:intergenic | 15.0% |
!! | AATCTAGAAACATTGTTAAT+GGG | - | chr7.2:6936665-6936684 | MS.gene23029:intron | 20.0% |
!! | ACTTAAATTATTACATCTGT+TGG | + | chr7.2:6936311-6936330 | None:intergenic | 20.0% |
!! | AGATGTAATAATTTAAGTCA+CGG | - | chr7.2:6936313-6936332 | MS.gene23029:intron | 20.0% |
!! | CATAAAAAAATTCAAAACCA+TGG | - | chr7.2:6937128-6937147 | MS.gene23029:intron | 20.0% |
!! | TACTAGTTAAATTAACATGT+TGG | - | chr7.2:6936365-6936384 | MS.gene23029:intron | 20.0% |
!! | TGTTGGATATATGTATTTAT+AGG | - | chr7.2:6936382-6936401 | MS.gene23029:intron | 20.0% |
!!! | CATGGTTTTGAATTTTTTTA+TGG | + | chr7.2:6937130-6937149 | None:intergenic | 20.0% |
!!! | TTAATGGGTTAATTTTAGTT+TGG | - | chr7.2:6936680-6936699 | MS.gene23029:intron | 20.0% |
! | AAGCACATAAACAACATATA+AGG | + | chr7.2:6937462-6937481 | None:intergenic | 25.0% |
! | ATTCCTAATTTATCATTAGC+AGG | - | chr7.2:6935767-6935786 | MS.gene23029:intron | 25.0% |
! | CAATCTAGAAACATTGTTAA+TGG | - | chr7.2:6936664-6936683 | MS.gene23029:intron | 25.0% |
! | CATGTTAATTTAACTAGTAC+TGG | + | chr7.2:6936364-6936383 | None:intergenic | 25.0% |
! | TGCTAATGATAAATTAGGAA+TGG | + | chr7.2:6935768-6935787 | None:intergenic | 25.0% |
! | TTCAAGAAATTTGCATAAGT+TGG | + | chr7.2:6936499-6936518 | None:intergenic | 25.0% |
!!! | AGTTTGATGTGAAGATTTTT+TGG | - | chr7.2:6937429-6937448 | MS.gene23029:CDS | 25.0% |
!!! | GTTTGATGTGAAGATTTTTT+GGG | - | chr7.2:6937430-6937449 | MS.gene23029:CDS | 25.0% |
!!! | TTAATTTTAGTTTGGACAAG+TGG | - | chr7.2:6936688-6936707 | MS.gene23029:intron | 25.0% |
AAATTCAAAACCATGGATTC+AGG | - | chr7.2:6937135-6937154 | MS.gene23029:intron | 30.0% | |
AAGCCTGCTAATGATAAATT+AGG | + | chr7.2:6935773-6935792 | None:intergenic | 30.0% | |
AGAAGACATAAAAGAAGCTT+TGG | - | chr7.2:6935802-6935821 | MS.gene23029:intron | 30.0% | |
AGCTTGTATTGTATCTAACT+TGG | + | chr7.2:6936808-6936827 | None:intergenic | 30.0% | |
AGTTTAATGATAAAGCAACG+TGG | - | chr7.2:6935976-6935995 | MS.gene23029:intron | 30.0% | |
ATAAAGTCCCAAAAAAACTC+AGG | + | chr7.2:6937506-6937525 | None:intergenic | 30.0% | |
ATGATGATATAAAGTGATGG+TGG | + | chr7.2:6936969-6936988 | None:intergenic | 30.0% | |
GTTTAATGATAAAGCAACGT+GGG | - | chr7.2:6935977-6935996 | MS.gene23029:intron | 30.0% | |
TCAAATGTTGTTGAGCTATT+TGG | + | chr7.2:6936571-6936590 | None:intergenic | 30.0% | |
TTCACTAAAAAACAGAGTTG+TGG | + | chr7.2:6937036-6937055 | None:intergenic | 30.0% | |
! | AATCCAATAACTACCTTTTG+AGG | - | chr7.2:6937611-6937630 | MS.gene23029:CDS | 30.0% |
! | ATGGATTGTGATGAATCTAT+TGG | - | chr7.2:6937681-6937700 | MS.gene23029:CDS | 30.0% |
! | GGTGTTCTAATTTTAGACTT+GGG | - | chr7.2:6937636-6937655 | MS.gene23029:CDS | 30.0% |
! | GTGATGATGATATAAAGTGA+TGG | + | chr7.2:6936972-6936991 | None:intergenic | 30.0% |
! | TGGTGTTCTAATTTTAGACT+TGG | - | chr7.2:6937635-6937654 | MS.gene23029:CDS | 30.0% |
!! | AACAATGTTTCTAGATTGCT+TGG | + | chr7.2:6936662-6936681 | None:intergenic | 30.0% |
!!! | GAGTTTTTTTGGGACTTTAT+GGG | - | chr7.2:6937506-6937525 | MS.gene23029:intron | 30.0% |
!!! | TGAGTTTTTTTGGGACTTTA+TGG | - | chr7.2:6937505-6937524 | MS.gene23029:intron | 30.0% |
!!! | TGTTGTTCCTGAGTTTTTTT+GGG | - | chr7.2:6937496-6937515 | MS.gene23029:intron | 30.0% |
AAAGCTTACTCTTCATGACT+TGG | - | chr7.2:6936158-6936177 | MS.gene23029:intron | 35.0% | |
ACATTTCAAGACACAGACAT+CGG | - | chr7.2:6936271-6936290 | MS.gene23029:intron | 35.0% | |
AGGACAAGCAATTACAGATT+TGG | - | chr7.2:6937155-6937174 | MS.gene23029:intron | 35.0% | |
ATGAATGTGTATGTGGTTGT+TGG | + | chr7.2:6936944-6936963 | None:intergenic | 35.0% | |
ATGACAATAGTACTACTGTG+CGG | + | chr7.2:6936845-6936864 | None:intergenic | 35.0% | |
ATTAGAACACCATCCTCAAA+AGG | + | chr7.2:6937627-6937646 | None:intergenic | 35.0% | |
ATTGCAACTTATTCAGCAAC+AGG | - | chr7.2:6936428-6936447 | MS.gene23029:intron | 35.0% | |
ATTGTGATGAATCTATTGGC+AGG | - | chr7.2:6937685-6937704 | MS.gene23029:CDS | 35.0% | |
CATCCTCAAAAGGTAGTTAT+TGG | + | chr7.2:6937617-6937636 | None:intergenic | 35.0% | |
CCTGTACTTCTACAAAACAA+GGG | - | chr7.2:6936604-6936623 | MS.gene23029:intron | 35.0% | |
GGACAAGCAATTACAGATTT+GGG | - | chr7.2:6937156-6937175 | MS.gene23029:intron | 35.0% | |
TCCTGTACTTCTACAAAACA+AGG | - | chr7.2:6936603-6936622 | MS.gene23029:intron | 35.0% | |
TCTGTGTCTTGAAATGTGAT+TGG | + | chr7.2:6936268-6936287 | None:intergenic | 35.0% | |
TTGTATCTAACTTGGACATC+AGG | + | chr7.2:6936800-6936819 | None:intergenic | 35.0% | |
TTGTGATGAATCTATTGGCA+GGG | - | chr7.2:6937686-6937705 | MS.gene23029:CDS | 35.0% | |
! | AGACATAAAAGAAGCTTTGG+AGG | - | chr7.2:6935805-6935824 | MS.gene23029:intron | 35.0% |
! | ATGTGCTGATATACTCACAT+TGG | - | chr7.2:6935850-6935869 | MS.gene23029:intron | 35.0% |
! | CTTTTCAACTTCACTGGAAA+AGG | - | chr7.2:6936451-6936470 | MS.gene23029:intron | 35.0% |
! | TTTATAGGAGCACACACAAT+TGG | - | chr7.2:6936397-6936416 | MS.gene23029:intron | 35.0% |
!! | AAGGTGCTGGAATATTGATT+AGG | + | chr7.2:6936052-6936071 | None:intergenic | 35.0% |
!! | AGGTGCTGGAATATTGATTA+GGG | + | chr7.2:6936051-6936070 | None:intergenic | 35.0% |
!! | CAATAACTACCTTTTGAGGA+TGG | - | chr7.2:6937615-6937634 | MS.gene23029:CDS | 35.0% |
!! | CATGACTTGGTTGTATTATC+AGG | - | chr7.2:6936171-6936190 | MS.gene23029:intron | 35.0% |
!!! | AGACTTGGGTTGAGTTTTAA+GGG | - | chr7.2:6937650-6937669 | MS.gene23029:CDS | 35.0% |
!!! | GTGTTGTTCCTGAGTTTTTT+TGG | - | chr7.2:6937495-6937514 | MS.gene23029:intron | 35.0% |
!!! | TAGACTTGGGTTGAGTTTTA+AGG | - | chr7.2:6937649-6937668 | MS.gene23029:CDS | 35.0% |
AAAACTCAGGAACAACACCA+TGG | + | chr7.2:6937493-6937512 | None:intergenic | 40.0% | |
AACTTGGACCAGTTGAATTC+TGG | - | chr7.2:6936723-6936742 | MS.gene23029:intron | 40.0% | |
AATCAGGATGCTTCATGCAT+AGG | + | chr7.2:6935934-6935953 | None:intergenic | 40.0% | |
AATTGCTTGTCCTGAATCCA+TGG | + | chr7.2:6937148-6937167 | None:intergenic | 40.0% | |
AGCTGAGTGATGTTATGGAA+AGG | + | chr7.2:6936071-6936090 | None:intergenic | 40.0% | |
AGTTTGGACAAGTGGATGTT+GGG | - | chr7.2:6936696-6936715 | MS.gene23029:intron | 40.0% | |
ATCAAAGGCCAGAATTCAAC+TGG | + | chr7.2:6936734-6936753 | None:intergenic | 40.0% | |
ATGGCTTCCAAGTATAGCTT+TGG | - | chr7.2:6937302-6937321 | MS.gene23029:intron | 40.0% | |
TAGTTTGGACAAGTGGATGT+TGG | - | chr7.2:6936695-6936714 | MS.gene23029:intron | 40.0% | |
TATGTGCTTGAATCCAACCA+TGG | - | chr7.2:6937473-6937492 | MS.gene23029:intron | 40.0% | |
TCAGCACATGATACAATTCC+TGG | + | chr7.2:6935839-6935858 | None:intergenic | 40.0% | |
TTCTTGAAGACCAAATGCCA+AGG | - | chr7.2:6936511-6936530 | MS.gene23029:intron | 40.0% | |
! | AACAGGCTTTTCAACTTCAC+TGG | - | chr7.2:6936445-6936464 | MS.gene23029:intron | 40.0% |
! | GCATAAGTTGGATTCAGAGA+TGG | + | chr7.2:6936487-6936506 | None:intergenic | 40.0% |
!!! | CCCTTGTTTTGTAGAAGTAC+AGG | + | chr7.2:6936607-6936626 | None:intergenic | 40.0% |
ATCCATCTCTACTGTTGTGG+TGG | + | chr7.2:6936548-6936567 | None:intergenic | 45.0% | |
CAATAGTACTACTGTGCGGA+CGG | + | chr7.2:6936841-6936860 | None:intergenic | 45.0% | |
CTAACTTGGACATCAGGTAG+TGG | + | chr7.2:6936794-6936813 | None:intergenic | 45.0% | |
CTCTTCATAGCAAGCGCTAT+TGG | - | chr7.2:6937083-6937102 | MS.gene23029:intron | 45.0% | |
GAATCTATTGGCAGGGTTGA+TGG | - | chr7.2:6937693-6937712 | MS.gene23029:CDS | 45.0% | |
GACGATGAGAGAAGAGGAAA+AGG | + | chr7.2:6937334-6937353 | None:intergenic | 45.0% | |
GAGAGAAGAGGAAAAGGTAG+TGG | + | chr7.2:6937328-6937347 | None:intergenic | 45.0% | |
GATTAGGGCTTCAATGCTTC+TGG | + | chr7.2:6936036-6936055 | None:intergenic | 45.0% | |
GGGACTTTATGGGTAAGTTC+TGG | - | chr7.2:6937516-6937535 | MS.gene23029:intron | 45.0% | |
GTAGCAAACATCACAAGCGA+GGG | + | chr7.2:6937388-6937407 | None:intergenic | 45.0% | |
GTAGTGGCCAAAGCTATACT+TGG | + | chr7.2:6937312-6937331 | None:intergenic | 45.0% | |
GTCTGAGCTGAGTGATGTTA+TGG | + | chr7.2:6936076-6936095 | None:intergenic | 45.0% | |
GTTTGGACAAGTGGATGTTG+GGG | - | chr7.2:6936697-6936716 | MS.gene23029:intron | 45.0% | |
TGGATCCATCTCTACTGTTG+TGG | + | chr7.2:6936551-6936570 | None:intergenic | 45.0% | |
TGTAGCAAACATCACAAGCG+AGG | + | chr7.2:6937389-6937408 | None:intergenic | 45.0% | |
TTGAACGACGATGAGAGAAG+AGG | + | chr7.2:6937340-6937359 | None:intergenic | 45.0% | |
! | CAAGCGAGGGAAAGTTGATT+TGG | + | chr7.2:6937375-6937394 | None:intergenic | 45.0% |
! | CATAGCAAGCGCTATTGGTT+TGG | - | chr7.2:6937088-6937107 | MS.gene23029:intron | 45.0% |
! | GGTGGTGATGAATGTGTATG+TGG | + | chr7.2:6936951-6936970 | None:intergenic | 45.0% |
! | GTGATGTTATGGAAAGGTGC+TGG | + | chr7.2:6936065-6936084 | None:intergenic | 45.0% |
!! | AGCGCTTGCTATGAAGAGAA+TGG | + | chr7.2:6937081-6937100 | None:intergenic | 45.0% |
!! | GCGCTATTGGTTTGGAATCA+TGG | - | chr7.2:6937096-6937115 | MS.gene23029:intron | 45.0% |
!!! | AGTTTTAAGGGTGTTGGCGA+TGG | - | chr7.2:6937662-6937681 | MS.gene23029:CDS | 45.0% |
!!! | GGGTTGAGTTTTAAGGGTGT+TGG | - | chr7.2:6937656-6937675 | MS.gene23029:CDS | 45.0% |
!! | ATTAATTAATATTATATCAA+AGG | + | chr7.2:6936749-6936768 | None:intergenic | 5.0% |
CACCACCACAACAGTAGAGA+TGG | - | chr7.2:6936543-6936562 | MS.gene23029:intron | 50.0% | |
CTCAGGAACAACACCATGGT+TGG | + | chr7.2:6937489-6937508 | None:intergenic | 50.0% | |
GGAGCACACACAATTGGAGT+AGG | - | chr7.2:6936403-6936422 | MS.gene23029:intron | 50.0% | |
GTCACTTAGGCCTTGGCATT+TGG | + | chr7.2:6936524-6936543 | None:intergenic | 50.0% | |
GTGCTTACGGGTAGAAGAGA+TGG | - | chr7.2:6936002-6936021 | MS.gene23029:intron | 50.0% | |
GTGGATGTTGGGGTTCAACT+TGG | - | chr7.2:6936707-6936726 | MS.gene23029:intron | 50.0% | |
!! | AGCAACGTGGGAAGTGCTTA+CGG | - | chr7.2:6935989-6936008 | MS.gene23029:intron | 50.0% |
!! | AGGGTTGATGGTGAAGATGG+AGG | - | chr7.2:6937705-6937724 | MS.gene23029:CDS | 50.0% |
!! | CTGTTGTGGTGGTGTCACTT+AGG | + | chr7.2:6936537-6936556 | None:intergenic | 50.0% |
!! | GCTTTGGAGGAGAAATGTCC+AGG | - | chr7.2:6935818-6935837 | MS.gene23029:intron | 50.0% |
!! | GTTTTGTTGGAGTCCACTGC+TGG | - | chr7.2:6935722-6935741 | MS.gene23029:CDS | 50.0% |
!!! | GTGTGACGCATCGGTTTTGT+TGG | - | chr7.2:6935709-6935728 | MS.gene23029:CDS | 50.0% |
GTCCACTGCTGGTAACACTG+CGG | - | chr7.2:6935733-6935752 | MS.gene23029:CDS | 55.0% | |
TGCTGGTAACACTGCGGAGA+AGG | - | chr7.2:6935739-6935758 | MS.gene23029:CDS | 55.0% | |
! | GTTTCAGGGGTGTGACGCAT+CGG | - | chr7.2:6935700-6935719 | MS.gene23029:CDS | 55.0% |
!! | GCAACGTGGGAAGTGCTTAC+GGG | - | chr7.2:6935990-6936009 | MS.gene23029:intron | 55.0% |
!! | GGCAGGGTTGATGGTGAAGA+TGG | - | chr7.2:6937702-6937721 | MS.gene23029:CDS | 55.0% |
!! | TGGTGGTGTCACTTAGGCCT+TGG | + | chr7.2:6936531-6936550 | None:intergenic | 55.0% |
CTCCGCAGTGTTACCAGCAG+TGG | + | chr7.2:6935738-6935757 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 6935692 | 6937743 | 6935692 | ID=MS.gene23029 |
chr7.2 | mRNA | 6935692 | 6937743 | 6935692 | ID=MS.gene23029.t1;Parent=MS.gene23029 |
chr7.2 | exon | 6937549 | 6937743 | 6937549 | ID=MS.gene23029.t1.exon1;Parent=MS.gene23029.t1 |
chr7.2 | CDS | 6937549 | 6937743 | 6937549 | ID=cds.MS.gene23029.t1;Parent=MS.gene23029.t1 |
chr7.2 | exon | 6937348 | 6937457 | 6937348 | ID=MS.gene23029.t1.exon2;Parent=MS.gene23029.t1 |
chr7.2 | CDS | 6937348 | 6937457 | 6937348 | ID=cds.MS.gene23029.t1;Parent=MS.gene23029.t1 |
chr7.2 | exon | 6937243 | 6937295 | 6937243 | ID=MS.gene23029.t1.exon3;Parent=MS.gene23029.t1 |
chr7.2 | CDS | 6937243 | 6937295 | 6937243 | ID=cds.MS.gene23029.t1;Parent=MS.gene23029.t1 |
chr7.2 | exon | 6936749 | 6937031 | 6936749 | ID=MS.gene23029.t1.exon4;Parent=MS.gene23029.t1 |
chr7.2 | CDS | 6936749 | 6937031 | 6936749 | ID=cds.MS.gene23029.t1;Parent=MS.gene23029.t1 |
chr7.2 | exon | 6935692 | 6935764 | 6935692 | ID=MS.gene23029.t1.exon5;Parent=MS.gene23029.t1 |
chr7.2 | CDS | 6935692 | 6935764 | 6935692 | ID=cds.MS.gene23029.t1;Parent=MS.gene23029.t1 |
Gene Sequence |
Protein sequence |