Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056076.t1 | XP_003604118.1 | 96.9 | 324 | 8 | 1 | 1 | 324 | 1 | 322 | 2.80E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056076.t1 | I6YGS0 | 36.0 | 331 | 187 | 8 | 1 | 321 | 1 | 316 | 3.7e-57 | 223.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056076.t1 | G7JUF4 | 96.9 | 324 | 8 | 1 | 1 | 324 | 1 | 322 | 2.0e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene056076 | 0.80227 | 6.08E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene056076 | 0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene056076 | 0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene056076 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene056076 | 0.817998 | 2.47E-52 | -1.69E-46 |
| MS.gene054277 | MS.gene056076 | 0.821973 | 3.04E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene056076 | 0.838819 | 2.29E-57 | -1.69E-46 |
| MS.gene056076 | MS.gene056920 | 0.817283 | 3.57E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene063722 | -0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene063988 | 0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene065724 | 0.822635 | 2.13E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene065728 | 0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene065729 | 0.808375 | 3.20E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene06593 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene066602 | 0.839505 | 1.52E-57 | -1.69E-46 |
| MS.gene056076 | MS.gene066937 | 0.83208 | 1.16E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene066938 | 0.800155 | 1.65E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene06756 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene06805 | 0.813472 | 2.52E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene069855 | -0.804158 | 2.47E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene070947 | 0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene071844 | 0.802625 | 5.13E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene07329 | -0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene073310 | -0.800956 | 1.13E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene073526 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene073870 | 0.815361 | 9.61E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene074299 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene07792 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene08883 | 0.813201 | 2.89E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene20126 | 0.804906 | 1.73E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene20127 | 0.81265 | 3.81E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene22618 | 0.806824 | 6.82E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene23029 | 0.802654 | 5.06E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene23507 | 0.808593 | 2.87E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene26289 | 0.807296 | 5.42E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene26294 | 0.846182 | 2.55E-59 | -1.69E-46 |
| MS.gene056076 | MS.gene26968 | 0.809449 | 1.88E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene28548 | 0.828494 | 8.72E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene30382 | 0.803191 | 3.92E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene30666 | 0.808353 | 3.23E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene35741 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene37350 | 0.813641 | 2.31E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene38687 | 0.806891 | 6.60E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene40830 | 0.857224 | 1.89E-62 | -1.69E-46 |
| MS.gene056076 | MS.gene42005 | 0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene42084 | 0.800534 | 1.38E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene42096 | 0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene44142 | 0.845258 | 4.54E-59 | -1.69E-46 |
| MS.gene056076 | MS.gene44712 | 0.810163 | 1.32E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene44958 | 0.806587 | 7.65E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene45893 | 0.819059 | 1.42E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene46266 | 0.808584 | 2.88E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene46433 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene47575 | 0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene47719 | 0.811128 | 8.17E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene48023 | 0.802597 | 5.20E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene48169 | 0.806562 | 7.74E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene48885 | 0.837226 | 5.89E-57 | -1.69E-46 |
| MS.gene056076 | MS.gene49021 | 0.827597 | 1.43E-54 | -1.69E-46 |
| MS.gene056076 | MS.gene50279 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene54029 | 0.80929 | 2.04E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene56509 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene58786 | 0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene60804 | 0.800429 | 1.45E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene60913 | 0.803231 | 3.85E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene63292 | 0.80257 | 5.27E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene63749 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene64584 | 0.802225 | 6.21E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene65400 | -0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene65833 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene67371 | 0.819914 | 9.04E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene69966 | 0.821998 | 3.00E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene71342 | 0.813185 | 2.91E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene71346 | 0.803023 | 4.25E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene71350 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene72375 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene72940 | 0.828583 | 8.29E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene74774 | 0.818455 | 1.94E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene75472 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene76521 | -0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene76737 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene77033 | 0.802267 | 6.08E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene77595 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene79150 | 0.800441 | 1.44E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene79220 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene056076 | MS.gene80609 | 0.812705 | 3.71E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene80744 | 0.818693 | 1.72E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene81770 | 0.825176 | 5.41E-54 | -1.69E-46 |
| MS.gene056076 | MS.gene81774 | 0.818303 | 2.10E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene82244 | 0.805236 | 1.47E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene82245 | 0.801319 | 9.52E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene82623 | 0.816642 | 4.98E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene84143 | 0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene84222 | 0.806385 | 8.44E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene85485 | 0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene85750 | 0.821872 | 3.20E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene87043 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene87056 | 0.813825 | 2.10E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene87346 | 0.807534 | 4.82E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene88317 | -0.803851 | 2.86E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene88365 | 0.805975 | 1.03E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene90685 | 0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene90814 | 0.815595 | 8.53E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene91221 | 0.81409 | 1.84E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene91222 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene91223 | 0.813674 | 2.27E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene91226 | 0.846693 | 1.85E-59 | -1.69E-46 |
| MS.gene056076 | MS.gene91973 | 0.812852 | 3.44E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene91977 | 0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene95804 | 0.826844 | 2.17E-54 | -1.69E-46 |
| MS.gene056076 | MS.gene96252 | -0.804017 | 2.64E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene96348 | -0.80282 | 4.68E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene96880 | -0.806836 | 6.78E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene97182 | 0.831179 | 1.93E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene97335 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene98470 | 0.803561 | 3.29E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene99062 | 0.812446 | 4.22E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056076 | MS.gene066361 | PPI |
| MS.gene056076 | MS.gene035371 | PPI |
| MS.gene056076 | MS.gene071502 | PPI |
| MS.gene056076 | MS.gene041604 | PPI |
| MS.gene76453 | MS.gene056076 | PPI |
| MS.gene056076 | MS.gene22955 | PPI |
| MS.gene056076 | MS.gene071500 | PPI |
| MS.gene056076 | MS.gene025707 | PPI |
| MS.gene056076 | MS.gene012063 | PPI |
| MS.gene77823 | MS.gene056076 | PPI |
| MS.gene056076 | MS.gene035369 | PPI |
| MS.gene035367 | MS.gene056076 | PPI |
| MS.gene056076 | MS.gene035373 | PPI |
| MS.gene071504 | MS.gene056076 | PPI |
| MS.gene056076 | MS.gene07001 | PPI |
| MS.gene066360 | MS.gene056076 | PPI |
| MS.gene89620 | MS.gene056076 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056076.t1 | MTR_4g005160 | 96.914 | 324 | 8 | 1 | 1 | 324 | 1 | 322 | 0.0 | 648 |
| MS.gene056076.t1 | MTR_7g113030 | 72.308 | 325 | 83 | 4 | 1 | 324 | 1 | 319 | 3.16e-179 | 498 |
| MS.gene056076.t1 | MTR_7g113050 | 72.000 | 325 | 84 | 4 | 1 | 324 | 1 | 319 | 8.21e-179 | 497 |
| MS.gene056076.t1 | MTR_7g113020 | 72.615 | 325 | 82 | 4 | 1 | 324 | 1 | 319 | 1.75e-178 | 496 |
| MS.gene056076.t1 | MTR_7g112615 | 71.692 | 325 | 85 | 4 | 1 | 324 | 1 | 319 | 7.82e-177 | 492 |
| MS.gene056076.t1 | MTR_7g112620 | 70.462 | 325 | 89 | 4 | 1 | 324 | 1 | 319 | 1.18e-174 | 486 |
| MS.gene056076.t1 | MTR_7g112960 | 68.308 | 325 | 96 | 4 | 1 | 324 | 1 | 319 | 1.06e-166 | 466 |
| MS.gene056076.t1 | MTR_7g112963 | 67.385 | 325 | 99 | 4 | 1 | 324 | 1 | 319 | 1.70e-164 | 461 |
| MS.gene056076.t1 | MTR_7g112970 | 67.692 | 325 | 95 | 5 | 1 | 324 | 1 | 316 | 7.18e-162 | 454 |
| MS.gene056076.t1 | MTR_7g113050 | 73.663 | 243 | 58 | 3 | 1 | 242 | 1 | 238 | 7.01e-134 | 380 |
| MS.gene056076.t1 | MTR_4g120240 | 56.442 | 326 | 133 | 4 | 1 | 324 | 37 | 355 | 3.71e-133 | 383 |
| MS.gene056076.t1 | MTR_7g113010 | 65.854 | 287 | 91 | 4 | 1 | 286 | 1 | 281 | 1.32e-132 | 390 |
| MS.gene056076.t1 | MTR_7g108825 | 56.790 | 324 | 133 | 4 | 1 | 324 | 1 | 317 | 4.81e-132 | 379 |
| MS.gene056076.t1 | MTR_7g112615 | 72.840 | 243 | 60 | 3 | 1 | 242 | 1 | 238 | 2.27e-131 | 374 |
| MS.gene056076.t1 | MTR_1g083480 | 98.101 | 158 | 3 | 0 | 1 | 158 | 1 | 158 | 1.11e-114 | 329 |
| MS.gene056076.t1 | MTR_7g108825 | 56.612 | 242 | 99 | 3 | 1 | 242 | 1 | 236 | 5.39e-95 | 281 |
| MS.gene056076.t1 | MTR_8g076680 | 44.136 | 324 | 172 | 5 | 1 | 324 | 3 | 317 | 1.28e-92 | 278 |
| MS.gene056076.t1 | MTR_7g112615 | 74.691 | 162 | 37 | 2 | 1 | 161 | 1 | 159 | 5.52e-86 | 256 |
| MS.gene056076.t1 | MTR_8g076680 | 46.281 | 242 | 124 | 2 | 1 | 242 | 3 | 238 | 6.95e-75 | 230 |
| MS.gene056076.t1 | MTR_7g112910 | 48.016 | 252 | 70 | 7 | 74 | 324 | 4 | 195 | 1.18e-68 | 213 |
| MS.gene056076.t1 | MTR_2g090240 | 36.697 | 327 | 186 | 8 | 1 | 323 | 1 | 310 | 3.08e-62 | 200 |
| MS.gene056076.t1 | MTR_2g090245 | 35.780 | 327 | 189 | 8 | 1 | 323 | 1 | 310 | 8.38e-61 | 197 |
| MS.gene056076.t1 | MTR_4g089040 | 35.152 | 330 | 186 | 9 | 1 | 323 | 1 | 309 | 1.16e-59 | 194 |
| MS.gene056076.t1 | MTR_4g089060 | 34.251 | 327 | 193 | 7 | 1 | 323 | 1 | 309 | 2.58e-59 | 193 |
| MS.gene056076.t1 | MTR_4g089060 | 33.526 | 346 | 197 | 9 | 1 | 323 | 1 | 336 | 2.99e-54 | 181 |
| MS.gene056076.t1 | MTR_4g089060 | 36.555 | 238 | 136 | 4 | 1 | 235 | 1 | 226 | 1.11e-49 | 166 |
| MS.gene056076.t1 | MTR_3g024250 | 67.273 | 110 | 33 | 1 | 45 | 154 | 1 | 107 | 3.14e-49 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056076.t1 | AT3G05600 | 59.878 | 329 | 122 | 6 | 1 | 324 | 1 | 324 | 5.31e-145 | 412 |
| MS.gene056076.t1 | AT4G02340 | 54.321 | 324 | 140 | 4 | 1 | 324 | 1 | 316 | 2.20e-131 | 377 |
| MS.gene056076.t1 | AT2G26740 | 55.352 | 327 | 134 | 6 | 4 | 324 | 1 | 321 | 1.49e-116 | 339 |
| MS.gene056076.t1 | AT4G15960 | 52.266 | 331 | 144 | 6 | 1 | 324 | 51 | 374 | 2.14e-116 | 341 |
| MS.gene056076.t1 | AT2G26750 | 53.374 | 326 | 141 | 6 | 4 | 324 | 1 | 320 | 1.03e-110 | 325 |
| MS.gene056076.t1 | AT3G05600 | 61.134 | 247 | 87 | 5 | 1 | 242 | 1 | 243 | 1.59e-109 | 318 |
| MS.gene056076.t1 | AT4G15955 | 49.102 | 334 | 125 | 7 | 3 | 324 | 4 | 304 | 1.60e-101 | 300 |
| MS.gene056076.t1 | AT3G51000 | 44.713 | 331 | 159 | 8 | 3 | 324 | 4 | 319 | 2.43e-92 | 278 |
| MS.gene056076.t1 | AT4G15955 | 59.777 | 179 | 58 | 4 | 3 | 170 | 4 | 179 | 2.62e-69 | 214 |
| MS.gene056076.t1 | AT4G15955 | 60.000 | 170 | 54 | 4 | 3 | 161 | 4 | 170 | 6.23e-66 | 205 |
Find 98 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAGGCCTTGACTCTTTC+TGG | 0.151751 | 1.4:+67539079 | None:intergenic |
| TGCAGTGGCCCCTGATCTTC+GGG | 0.210716 | 1.4:-67539263 | MS.gene056076:CDS |
| TGATGTCTTGTGCTGCTTCT+TGG | 0.213872 | 1.4:+67538259 | None:intergenic |
| CTATTATGTGTGCAGATTTC+AGG | 0.219315 | 1.4:-67538969 | MS.gene056076:intron |
| CTCTTGGCGCCATCAGATTC+TGG | 0.252842 | 1.4:-67539308 | MS.gene056076:CDS |
| GCATCATAGTTGTTTACTTT+GGG | 0.258817 | 1.4:+67539016 | None:intergenic |
| GTGTAGCTGGTCACTGATTC+TGG | 0.284704 | 1.4:+67539220 | None:intergenic |
| GTGCAGTGGCCCCTGATCTT+CGG | 0.304764 | 1.4:-67539264 | MS.gene056076:CDS |
| GTTACTAAATTCAACAAAAC+TGG | 0.304863 | 1.4:-67538627 | MS.gene056076:CDS |
| CCAGTTCCATACCCTCCTTT+TGG | 0.320325 | 1.4:+67538720 | None:intergenic |
| CAAGAAAGATGTTCCAGGTT+TGG | 0.350912 | 1.4:-67538322 | MS.gene056076:CDS |
| GATGCATTTCATGCCAAGTA+TGG | 0.358360 | 1.4:-67538998 | MS.gene056076:CDS |
| TCACCGTAGCCCCGAAGATC+AGG | 0.368042 | 1.4:+67539253 | None:intergenic |
| CACAGAATAGTAGAAGTAAA+TGG | 0.369517 | 1.4:-67539406 | MS.gene056076:CDS |
| TTCAACAAAACTGGCTTCAC+TGG | 0.380968 | 1.4:-67538618 | MS.gene056076:CDS |
| ATATCTTATTCTTACCATCT+TGG | 0.383744 | 1.4:-67538677 | MS.gene056076:CDS |
| TGCATCATAGTTGTTTACTT+TGG | 0.388996 | 1.4:+67539015 | None:intergenic |
| TGGAAAAGCCGAAGCCGAAT+TGG | 0.398454 | 1.4:-67538811 | MS.gene056076:CDS |
| CCAAAAGGAGGGTATGGAAC+TGG | 0.402502 | 1.4:-67538720 | MS.gene056076:CDS |
| TCCCTGAGTTATGGTACTCT+TGG | 0.411714 | 1.4:-67539324 | MS.gene056076:CDS |
| TACTCCAGCCAATTCGGCTT+CGG | 0.419392 | 1.4:+67538803 | None:intergenic |
| ATAATAATCAAGATCTTCTT+CGG | 0.431491 | 1.4:+67538650 | None:intergenic |
| TCACCTGTAATGTACTTTAC+CGG | 0.433581 | 1.4:+67538402 | None:intergenic |
| CATTACAGGTGATTGTGGTT+TGG | 0.434737 | 1.4:-67538391 | MS.gene056076:CDS |
| TGCACGGTTTCCCTGAGTTA+TGG | 0.436444 | 1.4:-67539333 | MS.gene056076:CDS |
| GTACCGGTAAAGTACATTAC+AGG | 0.438457 | 1.4:-67538405 | MS.gene056076:CDS |
| GCCCCTGATCTTCGGGGCTA+CGG | 0.442117 | 1.4:-67539256 | MS.gene056076:CDS |
| TGTACCTTGTCGGACATGAT+TGG | 0.443115 | 1.4:-67539138 | MS.gene056076:CDS |
| ATCACCAACAAGGTGAAAAC+AGG | 0.453861 | 1.4:+67539198 | None:intergenic |
| AATAAGATATCCTGCATATC+CGG | 0.454796 | 1.4:+67538690 | None:intergenic |
| GTTCCATTCCGACCCTTCCT+TGG | 0.455873 | 1.4:-67539046 | MS.gene056076:CDS |
| TTTGGGGTTTCTTCCAAGGA+AGG | 0.460713 | 1.4:+67539033 | None:intergenic |
| TTACTTTGGGGTTTCTTCCA+AGG | 0.467534 | 1.4:+67539029 | None:intergenic |
| GGCCACTGCACGGTAACCCT+TGG | 0.471280 | 1.4:+67539276 | None:intergenic |
| GGTTTCAAGAAAGATGTTCC+AGG | 0.471931 | 1.4:-67538327 | MS.gene056076:CDS |
| TGGATTCAATCCGGATATGC+AGG | 0.474601 | 1.4:-67538700 | MS.gene056076:CDS |
| TGTTCCAGGTTTGGAGGAAG+TGG | 0.476149 | 1.4:-67538313 | MS.gene056076:CDS |
| AACACCTACTCCAGCCAATT+CGG | 0.482718 | 1.4:+67538797 | None:intergenic |
| GTACCTTGTCGGACATGATT+GGG | 0.482847 | 1.4:-67539137 | MS.gene056076:CDS |
| AAAATGCATGTTGCAGAGAA+AGG | 0.492527 | 1.4:-67539379 | MS.gene056076:CDS |
| AAGGTGAAAACAGGTGTAGC+TGG | 0.497712 | 1.4:+67539207 | None:intergenic |
| TTTGGAGGAAGTGGTTGTGC+AGG | 0.503362 | 1.4:-67538304 | MS.gene056076:CDS |
| ATAATAGTCATCTCCATACT+TGG | 0.505750 | 1.4:+67538985 | None:intergenic |
| GAGGAAGTGGTTGTGCAGGA+AGG | 0.517437 | 1.4:-67538300 | MS.gene056076:CDS |
| TTGGGGTTTCTTCCAAGGAA+GGG | 0.521536 | 1.4:+67539034 | None:intergenic |
| AAAGCCGAAGCCGAATTGGC+TGG | 0.521985 | 1.4:-67538807 | MS.gene056076:CDS |
| CGCCAAGAGTACCATAACTC+AGG | 0.523914 | 1.4:+67539322 | None:intergenic |
| CATGATTGGGGTGCGATCAT+CGG | 0.526291 | 1.4:-67539124 | MS.gene056076:CDS |
| CATCATAGTTGTTTACTTTG+GGG | 0.527231 | 1.4:+67539017 | None:intergenic |
| AACAAAACTGGCTTCACTGG+AGG | 0.529011 | 1.4:-67538615 | MS.gene056076:CDS |
| GATTCTGGATTTGAGCTCCA+AGG | 0.531726 | 1.4:-67539293 | MS.gene056076:CDS |
| AGGAAGTGGTTGTGCAGGAA+GGG | 0.538638 | 1.4:-67538299 | MS.gene056076:CDS |
| ACAACCACTTCCTCCAAACC+TGG | 0.541024 | 1.4:+67538309 | None:intergenic |
| CACCGTAGCCCCGAAGATCA+GGG | 0.541844 | 1.4:+67539254 | None:intergenic |
| CTTCCAAGGAAGGGTCGGAA+TGG | 0.543706 | 1.4:+67539043 | None:intergenic |
| AAGTACATTACAGGTGATTG+TGG | 0.546047 | 1.4:-67538396 | MS.gene056076:CDS |
| CCAGTGGTGTTGATGTTGCA+CGG | 0.546061 | 1.4:-67539349 | MS.gene056076:CDS |
| GAAAGATGTTCCAGGTTTGG+AGG | 0.547019 | 1.4:-67538319 | MS.gene056076:CDS |
| ATTCTGGATTTGAGCTCCAA+GGG | 0.550282 | 1.4:-67539292 | MS.gene056076:CDS |
| CCGTGCAACATCAACACCAC+TGG | 0.550819 | 1.4:+67539349 | None:intergenic |
| TGGAACACTAAGACAAACAT+AGG | 0.551680 | 1.4:+67539063 | None:intergenic |
| ACATCACCATGGAGTGAAGT+AGG | 0.556604 | 1.4:-67538438 | MS.gene056076:CDS |
| GTGGACAAAGTGTACCTTGT+CGG | 0.558093 | 1.4:-67539148 | MS.gene056076:CDS |
| GGTTTCTTCCAAGGAAGGGT+CGG | 0.558393 | 1.4:+67539038 | None:intergenic |
| CTCCAAGGGTTACCGTGCAG+TGG | 0.559388 | 1.4:-67539278 | MS.gene056076:CDS |
| ATTGCACTCATTGACTCTCT+AGG | 0.560324 | 1.4:-67539172 | MS.gene056076:CDS |
| ACAAAACTGGCTTCACTGGA+GGG | 0.561868 | 1.4:-67538614 | MS.gene056076:CDS |
| TCTTCTTCGGAAAGCCAAGA+TGG | 0.563903 | 1.4:+67538663 | None:intergenic |
| TTTGGGAAAATTGGAGGACC+GGG | 0.570933 | 1.4:+67538738 | None:intergenic |
| ATGGTTACTTTCCAGGAACT+GGG | 0.571538 | 1.4:-67538466 | MS.gene056076:intron |
| AGTAGGAGTGGTAAATGTAC+CGG | 0.572295 | 1.4:-67538421 | MS.gene056076:CDS |
| GTATGGAACTGGATTCAATC+CGG | 0.573575 | 1.4:-67538709 | MS.gene056076:CDS |
| ACCACTCCTACTTCACTCCA+TGG | 0.577429 | 1.4:+67538432 | None:intergenic |
| ATGATGACAACGAGGAAACC+CGG | 0.579962 | 1.4:-67538756 | MS.gene056076:CDS |
| GAAGATCAGGGGCCACTGCA+CGG | 0.580274 | 1.4:+67539266 | None:intergenic |
| ATACACTACGCCGAGTATGA+AGG | 0.580910 | 1.4:-67538367 | MS.gene056076:CDS |
| TGATACCATTGATAGGAACC+TGG | 0.582654 | 1.4:-67538831 | MS.gene056076:intron |
| ATTGGGGTGCGATCATCGGT+TGG | 0.592371 | 1.4:-67539120 | MS.gene056076:CDS |
| AGCTCAAATCCAGAATCTGA+TGG | 0.613338 | 1.4:+67539299 | None:intergenic |
| GCCAAGAGTACCATAACTCA+GGG | 0.614710 | 1.4:+67539323 | None:intergenic |
| AGGCCTTGACTCTTTCTGGT+CGG | 0.616032 | 1.4:+67539083 | None:intergenic |
| CATGTTGCAGAGAAAGGAGA+AGG | 0.616899 | 1.4:-67539373 | MS.gene056076:CDS |
| ACCGTAGCCCCGAAGATCAG+GGG | 0.621226 | 1.4:+67539255 | None:intergenic |
| GCAGTGGCCCCTGATCTTCG+GGG | 0.625803 | 1.4:-67539262 | MS.gene056076:CDS |
| ATGAAGGAATATATCCTCGA+TGG | 0.629060 | 1.4:-67538351 | MS.gene056076:CDS |
| CACCCCAATCATGTCCGACA+AGG | 0.629611 | 1.4:+67539134 | None:intergenic |
| AGGATATATTCCTTCATACT+CGG | 0.633804 | 1.4:+67538357 | None:intergenic |
| ACCATGGAGTGAAGTAGGAG+TGG | 0.635510 | 1.4:-67538433 | MS.gene056076:CDS |
| TACCTTGTCGGACATGATTG+GGG | 0.642774 | 1.4:-67539136 | MS.gene056076:CDS |
| AAGGAATATATCCTCGATGG+TGG | 0.654767 | 1.4:-67538348 | MS.gene056076:CDS |
| AGAGAAAGGAGAAGGTCCAG+TGG | 0.656472 | 1.4:-67539365 | MS.gene056076:CDS |
| GTTCCGACCAGAAAGAGTCA+AGG | 0.675560 | 1.4:-67539086 | MS.gene056076:CDS |
| GAAGCCGAATTGGCTGGAGT+AGG | 0.676454 | 1.4:-67538801 | MS.gene056076:CDS |
| ACTCATTGACTCTCTAGGTG+TGG | 0.677971 | 1.4:-67539167 | MS.gene056076:CDS |
| GTGCAATGATATCACCAACA+AGG | 0.702915 | 1.4:+67539188 | None:intergenic |
| CTTTCTTGAAACCACCATCG+AGG | 0.706418 | 1.4:+67538337 | None:intergenic |
| ACTGGGAGCTAACATCACCA+TGG | 0.711994 | 1.4:-67538449 | MS.gene056076:CDS |
| TGCGTAACATGATGACAACG+AGG | 0.737897 | 1.4:-67538764 | MS.gene056076:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTAAATACAACAAAATTT+AGG | - | chr1.4:67538770-67538789 | MS.gene056076:CDS | 15.0% |
| !! | ATAATAATCAAGATCTTCTT+CGG | + | chr1.4:67538998-67539017 | None:intergenic | 20.0% |
| !! | CTTTAGTATATATAAAGACA+TGG | - | chr1.4:67538725-67538744 | MS.gene056076:CDS | 20.0% |
| ! | ACTTTATTGATACCATTGAT+AGG | - | chr1.4:67538807-67538826 | MS.gene056076:CDS | 25.0% |
| ! | ATATCTTATTCTTACCATCT+TGG | - | chr1.4:67538968-67538987 | MS.gene056076:intron | 25.0% |
| ! | GTTACTAAATTCAACAAAAC+TGG | - | chr1.4:67539018-67539037 | MS.gene056076:CDS | 25.0% |
| AATAAGATATCCTGCATATC+CGG | + | chr1.4:67538958-67538977 | None:intergenic | 30.0% | |
| AGGATATATTCCTTCATACT+CGG | + | chr1.4:67539291-67539310 | None:intergenic | 30.0% | |
| ATAATAGTCATCTCCATACT+TGG | + | chr1.4:67538663-67538682 | None:intergenic | 30.0% | |
| CACAGAATAGTAGAAGTAAA+TGG | - | chr1.4:67538239-67538258 | MS.gene056076:CDS | 30.0% | |
| CATCATAGTTGTTTACTTTG+GGG | + | chr1.4:67538631-67538650 | None:intergenic | 30.0% | |
| CATCATGTTACGCAAAAAAT+AGG | + | chr1.4:67538875-67538894 | None:intergenic | 30.0% | |
| GCATCATAGTTGTTTACTTT+GGG | + | chr1.4:67538632-67538651 | None:intergenic | 30.0% | |
| TGCATCATAGTTGTTTACTT+TGG | + | chr1.4:67538633-67538652 | None:intergenic | 30.0% | |
| AAAATGCATGTTGCAGAGAA+AGG | - | chr1.4:67538266-67538285 | MS.gene056076:CDS | 35.0% | |
| AAGTACATTACAGGTGATTG+TGG | - | chr1.4:67539249-67539268 | MS.gene056076:CDS | 35.0% | |
| ATGAAGGAATATATCCTCGA+TGG | - | chr1.4:67539294-67539313 | MS.gene056076:CDS | 35.0% | |
| CATTATCAGCTAGTGAAAAG+AGG | + | chr1.4:67539162-67539181 | None:intergenic | 35.0% | |
| CTATTATGTGTGCAGATTTC+AGG | - | chr1.4:67538676-67538695 | MS.gene056076:CDS | 35.0% | |
| TCACCTGTAATGTACTTTAC+CGG | + | chr1.4:67539246-67539265 | None:intergenic | 35.0% | |
| TGGAACACTAAGACAAACAT+AGG | + | chr1.4:67538585-67538604 | None:intergenic | 35.0% | |
| ! | CTCTTTTCACTAGCTGATAA+TGG | - | chr1.4:67539160-67539179 | MS.gene056076:CDS | 35.0% |
| AAGGAATATATCCTCGATGG+TGG | - | chr1.4:67539297-67539316 | MS.gene056076:CDS | 40.0% | |
| AGCTCAAATCCAGAATCTGA+TGG | + | chr1.4:67538349-67538368 | None:intergenic | 40.0% | |
| AGTAGGAGTGGTAAATGTAC+CGG | - | chr1.4:67539224-67539243 | MS.gene056076:CDS | 40.0% | |
| ATCACCAACAAGGTGAAAAC+AGG | + | chr1.4:67538450-67538469 | None:intergenic | 40.0% | |
| ATTCTGGATTTGAGCTCCAA+GGG | - | chr1.4:67538353-67538372 | MS.gene056076:CDS | 40.0% | |
| CAAGAAAGATGTTCCAGGTT+TGG | - | chr1.4:67539323-67539342 | MS.gene056076:CDS | 40.0% | |
| CATTACAGGTGATTGTGGTT+TGG | - | chr1.4:67539254-67539273 | MS.gene056076:CDS | 40.0% | |
| GATGCATTTCATGCCAAGTA+TGG | - | chr1.4:67538647-67538666 | MS.gene056076:CDS | 40.0% | |
| GGTTTCAAGAAAGATGTTCC+AGG | - | chr1.4:67539318-67539337 | MS.gene056076:CDS | 40.0% | |
| GTATGGAACTGGATTCAATC+CGG | - | chr1.4:67538936-67538955 | MS.gene056076:intron | 40.0% | |
| GTGCAATGATATCACCAACA+AGG | + | chr1.4:67538460-67538479 | None:intergenic | 40.0% | |
| TGATACCATTGATAGGAACC+TGG | - | chr1.4:67538814-67538833 | MS.gene056076:CDS | 40.0% | |
| ! | AATGGTTACTTTCCAGGAAC+TGG | - | chr1.4:67539178-67539197 | MS.gene056076:CDS | 40.0% |
| ! | ATGGTTACTTTCCAGGAACT+GGG | - | chr1.4:67539179-67539198 | MS.gene056076:CDS | 40.0% |
| ! | ATTTTCCCAAAAGGAGGGTA+TGG | - | chr1.4:67538919-67538938 | MS.gene056076:intron | 40.0% |
| ! | CTCCAATTTTCCCAAAAGGA+GGG | - | chr1.4:67538914-67538933 | MS.gene056076:intron | 40.0% |
| ! | CTTTTCCAGGTTCCTATCAA+TGG | + | chr1.4:67538822-67538841 | None:intergenic | 40.0% |
| ! | GTACCGGTAAAGTACATTAC+AGG | - | chr1.4:67539240-67539259 | MS.gene056076:CDS | 40.0% |
| ! | TACACCTGTTTTCACCTTGT+TGG | - | chr1.4:67538443-67538462 | MS.gene056076:CDS | 40.0% |
| ! | TTCAACAAAACTGGCTTCAC+TGG | - | chr1.4:67539027-67539046 | MS.gene056076:CDS | 40.0% |
| !! | ATTGCACTCATTGACTCTCT+AGG | - | chr1.4:67538473-67538492 | MS.gene056076:intron | 40.0% |
| !! | GCTGATAATGGTTACTTTCC+AGG | - | chr1.4:67539172-67539191 | MS.gene056076:CDS | 40.0% |
| !! | TACCCTCCTTTTGGGAAAAT+TGG | + | chr1.4:67538919-67538938 | None:intergenic | 40.0% |
| !! | TTACTTTGGGGTTTCTTCCA+AGG | + | chr1.4:67538619-67538638 | None:intergenic | 40.0% |
| !! | TTTTGGGAAAATTGGAGGAC+CGG | + | chr1.4:67538911-67538930 | None:intergenic | 40.0% |
| AACACCTACTCCAGCCAATT+CGG | + | chr1.4:67538851-67538870 | None:intergenic | 45.0% | |
| AAGGTGAAAACAGGTGTAGC+TGG | + | chr1.4:67538441-67538460 | None:intergenic | 45.0% | |
| ACATAGGCCTTGACTCTTTC+TGG | + | chr1.4:67538569-67538588 | None:intergenic | 45.0% | |
| ACATCACCATGGAGTGAAGT+AGG | - | chr1.4:67539207-67539226 | MS.gene056076:CDS | 45.0% | |
| ATACACTACGCCGAGTATGA+AGG | - | chr1.4:67539278-67539297 | MS.gene056076:CDS | 45.0% | |
| ATGATGACAACGAGGAAACC+CGG | - | chr1.4:67538889-67538908 | MS.gene056076:intron | 45.0% | |
| CATGTTGCAGAGAAAGGAGA+AGG | - | chr1.4:67538272-67538291 | MS.gene056076:CDS | 45.0% | |
| CTTTCTTGAAACCACCATCG+AGG | + | chr1.4:67539311-67539330 | None:intergenic | 45.0% | |
| GAAAGATGTTCCAGGTTTGG+AGG | - | chr1.4:67539326-67539345 | MS.gene056076:CDS | 45.0% | |
| GATTCTGGATTTGAGCTCCA+AGG | - | chr1.4:67538352-67538371 | MS.gene056076:CDS | 45.0% | |
| GTACCTTGTCGGACATGATT+GGG | - | chr1.4:67538508-67538527 | MS.gene056076:intron | 45.0% | |
| GTGGACAAAGTGTACCTTGT+CGG | - | chr1.4:67538497-67538516 | MS.gene056076:intron | 45.0% | |
| TACCTTGTCGGACATGATTG+GGG | - | chr1.4:67538509-67538528 | MS.gene056076:intron | 45.0% | |
| TCCCTGAGTTATGGTACTCT+TGG | - | chr1.4:67538321-67538340 | MS.gene056076:CDS | 45.0% | |
| TCTTCTTCGGAAAGCCAAGA+TGG | + | chr1.4:67538985-67539004 | None:intergenic | 45.0% | |
| TGCGTAACATGATGACAACG+AGG | - | chr1.4:67538881-67538900 | MS.gene056076:intron | 45.0% | |
| TGGATTCAATCCGGATATGC+AGG | - | chr1.4:67538945-67538964 | MS.gene056076:intron | 45.0% | |
| TGTACCTTGTCGGACATGAT+TGG | - | chr1.4:67538507-67538526 | MS.gene056076:intron | 45.0% | |
| TTGGGGTTTCTTCCAAGGAA+GGG | + | chr1.4:67538614-67538633 | None:intergenic | 45.0% | |
| TTTGGGAAAATTGGAGGACC+GGG | + | chr1.4:67538910-67538929 | None:intergenic | 45.0% | |
| ! | AACAAAACTGGCTTCACTGG+AGG | - | chr1.4:67539030-67539049 | MS.gene056076:CDS | 45.0% |
| ! | ACAAAACTGGCTTCACTGGA+GGG | - | chr1.4:67539031-67539050 | MS.gene056076:CDS | 45.0% |
| ! | CAGTTCCATACCCTCCTTTT+GGG | + | chr1.4:67538927-67538946 | None:intergenic | 45.0% |
| ! | CCTCCAATTTTCCCAAAAGG+AGG | - | chr1.4:67538913-67538932 | MS.gene056076:intron | 45.0% |
| ! | GGTCCTCCAATTTTCCCAAA+AGG | - | chr1.4:67538910-67538929 | MS.gene056076:intron | 45.0% |
| ! | TTTGGGGTTTCTTCCAAGGA+AGG | + | chr1.4:67538615-67538634 | None:intergenic | 45.0% |
| !! | ACTCATTGACTCTCTAGGTG+TGG | - | chr1.4:67538478-67538497 | MS.gene056076:intron | 45.0% |
| !! | CCTCCTTTTGGGAAAATTGG+AGG | + | chr1.4:67538916-67538935 | None:intergenic | 45.0% |
| !! | GCCAAGAGTACCATAACTCA+GGG | + | chr1.4:67538325-67538344 | None:intergenic | 45.0% |
| !! | TGATGTCTTGTGCTGCTTCT+TGG | + | chr1.4:67539389-67539408 | None:intergenic | 45.0% |
| !! | CAAAATTTATAAAAATAAAA+AGG | - | chr1.4:67539114-67539133 | MS.gene056076:CDS | 5.0% |
| !!! | CTTTTTATTTTTATAAATTT+TGG | + | chr1.4:67539116-67539135 | None:intergenic | 5.0% |
| ACAACCACTTCCTCCAAACC+TGG | + | chr1.4:67539339-67539358 | None:intergenic | 50.0% | |
| ACCACTCCTACTTCACTCCA+TGG | + | chr1.4:67539216-67539235 | None:intergenic | 50.0% | |
| ACCATGGAGTGAAGTAGGAG+TGG | - | chr1.4:67539212-67539231 | MS.gene056076:CDS | 50.0% | |
| ACTGGGAGCTAACATCACCA+TGG | - | chr1.4:67539196-67539215 | MS.gene056076:CDS | 50.0% | |
| AGAGAAAGGAGAAGGTCCAG+TGG | - | chr1.4:67538280-67538299 | MS.gene056076:CDS | 50.0% | |
| AGGAAGTGGTTGTGCAGGAA+GGG | - | chr1.4:67539346-67539365 | MS.gene056076:CDS | 50.0% | |
| CATGATTGGGGTGCGATCAT+CGG | - | chr1.4:67538521-67538540 | MS.gene056076:intron | 50.0% | |
| GGTTTCTTCCAAGGAAGGGT+CGG | + | chr1.4:67538610-67538629 | None:intergenic | 50.0% | |
| GTTCCGACCAGAAAGAGTCA+AGG | - | chr1.4:67538559-67538578 | MS.gene056076:intron | 50.0% | |
| TACTCCAGCCAATTCGGCTT+CGG | + | chr1.4:67538845-67538864 | None:intergenic | 50.0% | |
| TGATGTTAGCTCCCAGTTCC+TGG | + | chr1.4:67539193-67539212 | None:intergenic | 50.0% | |
| TGCACGGTTTCCCTGAGTTA+TGG | - | chr1.4:67538312-67538331 | MS.gene056076:CDS | 50.0% | |
| TGGAAAAGCCGAAGCCGAAT+TGG | - | chr1.4:67538834-67538853 | MS.gene056076:intron | 50.0% | |
| TGTTCCAGGTTTGGAGGAAG+TGG | - | chr1.4:67539332-67539351 | MS.gene056076:CDS | 50.0% | |
| TTTGGAGGAAGTGGTTGTGC+AGG | - | chr1.4:67539341-67539360 | MS.gene056076:CDS | 50.0% | |
| ! | AATTCGGCTTCGGCTTTTCC+AGG | + | chr1.4:67538835-67538854 | None:intergenic | 50.0% |
| ! | AGGCCTTGACTCTTTCTGGT+CGG | + | chr1.4:67538565-67538584 | None:intergenic | 50.0% |
| ! | CCAAAAGGAGGGTATGGAAC+TGG | - | chr1.4:67538925-67538944 | MS.gene056076:intron | 50.0% |
| ! | CCAGTTCCATACCCTCCTTT+TGG | + | chr1.4:67538928-67538947 | None:intergenic | 50.0% |
| !! | CCAGTGGTGTTGATGTTGCA+CGG | - | chr1.4:67538296-67538315 | MS.gene056076:CDS | 50.0% |
| !! | CGCCAAGAGTACCATAACTC+AGG | + | chr1.4:67538326-67538345 | None:intergenic | 50.0% |
| !! | GTGTAGCTGGTCACTGATTC+TGG | + | chr1.4:67538428-67538447 | None:intergenic | 50.0% |
| AAAGCCGAAGCCGAATTGGC+TGG | - | chr1.4:67538838-67538857 | MS.gene056076:intron | 55.0% | |
| ATTGGGGTGCGATCATCGGT+TGG | - | chr1.4:67538525-67538544 | MS.gene056076:intron | 55.0% | |
| CACCCCAATCATGTCCGACA+AGG | + | chr1.4:67538514-67538533 | None:intergenic | 55.0% | |
| CCGTGCAACATCAACACCAC+TGG | + | chr1.4:67538299-67538318 | None:intergenic | 55.0% | |
| CTCTTGGCGCCATCAGATTC+TGG | - | chr1.4:67538337-67538356 | MS.gene056076:CDS | 55.0% | |
| CTTCCAAGGAAGGGTCGGAA+TGG | + | chr1.4:67538605-67538624 | None:intergenic | 55.0% | |
| GAAGCCGAATTGGCTGGAGT+AGG | - | chr1.4:67538844-67538863 | MS.gene056076:intron | 55.0% | |
| GAGGAAGTGGTTGTGCAGGA+AGG | - | chr1.4:67539345-67539364 | MS.gene056076:CDS | 55.0% | |
| GTTCCATTCCGACCCTTCCT+TGG | - | chr1.4:67538599-67538618 | MS.gene056076:CDS | 55.0% | |
| ACCGTAGCCCCGAAGATCAG+GGG | + | chr1.4:67538393-67538412 | None:intergenic | 60.0% | |
| CACCGTAGCCCCGAAGATCA+GGG | + | chr1.4:67538394-67538413 | None:intergenic | 60.0% | |
| CTCCAAGGGTTACCGTGCAG+TGG | - | chr1.4:67538367-67538386 | MS.gene056076:CDS | 60.0% | |
| GAAGATCAGGGGCCACTGCA+CGG | + | chr1.4:67538382-67538401 | None:intergenic | 60.0% | |
| GTGCAGTGGCCCCTGATCTT+CGG | - | chr1.4:67538381-67538400 | MS.gene056076:CDS | 60.0% | |
| TCACCGTAGCCCCGAAGATC+AGG | + | chr1.4:67538395-67538414 | None:intergenic | 60.0% | |
| TGCAGTGGCCCCTGATCTTC+GGG | - | chr1.4:67538382-67538401 | MS.gene056076:CDS | 60.0% | |
| GCAGTGGCCCCTGATCTTCG+GGG | - | chr1.4:67538383-67538402 | MS.gene056076:CDS | 65.0% | |
| GCCCCTGATCTTCGGGGCTA+CGG | - | chr1.4:67538389-67538408 | MS.gene056076:CDS | 65.0% | |
| GGCCACTGCACGGTAACCCT+TGG | + | chr1.4:67538372-67538391 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67538224 | 67539443 | 67538224 | ID=MS.gene056076 |
| chr1.4 | mRNA | 67538224 | 67539443 | 67538224 | ID=MS.gene056076.t1;Parent=MS.gene056076 |
| chr1.4 | exon | 67538970 | 67539443 | 67538970 | ID=MS.gene056076.t1.exon1;Parent=MS.gene056076.t1 |
| chr1.4 | CDS | 67538970 | 67539443 | 67538970 | ID=cds.MS.gene056076.t1;Parent=MS.gene056076.t1 |
| chr1.4 | exon | 67538588 | 67538838 | 67538588 | ID=MS.gene056076.t1.exon2;Parent=MS.gene056076.t1 |
| chr1.4 | CDS | 67538588 | 67538838 | 67538588 | ID=cds.MS.gene056076.t1;Parent=MS.gene056076.t1 |
| chr1.4 | exon | 67538224 | 67538473 | 67538224 | ID=MS.gene056076.t1.exon3;Parent=MS.gene056076.t1 |
| chr1.4 | CDS | 67538224 | 67538473 | 67538224 | ID=cds.MS.gene056076.t1;Parent=MS.gene056076.t1 |
| Gene Sequence |
| Protein sequence |
