Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23036.t1 | KEH24332.1 | 96.2 | 209 | 8 | 0 | 1 | 209 | 112 | 320 | 7.60E-111 | 409.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23036.t1 | Q7NJS7 | 45.8 | 201 | 103 | 3 | 10 | 210 | 49 | 243 | 1.4e-41 | 171.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23036.t1 | A0A072U3P1 | 96.2 | 209 | 8 | 0 | 1 | 209 | 112 | 320 | 5.5e-111 | 409.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene23036 | 0.811669 | 6.24E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene23036 | 0.805742 | 1.15E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene23036 | 0.804847 | 1.77E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene23036 | 0.805894 | 1.07E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene23036 | 0.811683 | 6.19E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23036.t1 | MTR_7g107330 | 95.714 | 210 | 9 | 0 | 1 | 210 | 112 | 321 | 2.04e-145 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23036.t1 | AT5G64150 | 71.090 | 211 | 60 | 1 | 1 | 210 | 124 | 334 | 8.96e-112 | 325 |
Find 68 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGGGTTTGGGCTGATTT+AGG | 0.146720 | 7.2:+7037901 | MS.gene23036:CDS |
| CCTGTGGCTGTTGCTGTTGC+AGG | 0.260902 | 7.2:+7038003 | MS.gene23036:CDS |
| GAGGGGTTTGGGCTGATTTA+GGG | 0.279292 | 7.2:+7037902 | MS.gene23036:CDS |
| GACTGAACTTATTGTTGATT+TGG | 0.280857 | 7.2:+7037843 | MS.gene23036:CDS |
| CTCTTCTCCATCTGTGTGAT+GGG | 0.315925 | 7.2:+7038847 | MS.gene23036:CDS |
| ATTTCTTTACTAGGTATATA+AGG | 0.321425 | 7.2:-7038750 | None:intergenic |
| TGTTCAAAGGTATTCTTTGC+AGG | 0.342417 | 7.2:+7038032 | MS.gene23036:CDS |
| AGGATTTGAAAAGAGGGGTT+TGG | 0.358688 | 7.2:+7037890 | MS.gene23036:CDS |
| GGATTTGAAAAGAGGGGTTT+GGG | 0.359508 | 7.2:+7037891 | MS.gene23036:CDS |
| TGGTGGATTCTTTGCCTTTG+AGG | 0.362032 | 7.2:+7038890 | MS.gene23036:CDS |
| AAGAATGAGGATTTGAAAAG+AGG | 0.374020 | 7.2:+7037883 | MS.gene23036:CDS |
| GTTGGAACCATTGAAGGATA+TGG | 0.381607 | 7.2:+7038695 | MS.gene23036:CDS |
| GGAAGTGGTGCTCTTGCTAT+TGG | 0.389038 | 7.2:+7037928 | MS.gene23036:CDS |
| TATAGGACAAAATTGAACTA+AGG | 0.412570 | 7.2:+7038661 | MS.gene23036:intron |
| GAACCTAGAGCTGCATTAGA+TGG | 0.429340 | 7.2:+7038804 | MS.gene23036:CDS |
| GCTCTTCTCCATCTGTGTGA+TGG | 0.430712 | 7.2:+7038846 | MS.gene23036:CDS |
| TAGAGGAACTATATTGTTTG+TGG | 0.431806 | 7.2:+7037713 | MS.gene23036:CDS |
| CTCTTGCTATTGGCATTGGT+AGG | 0.433770 | 7.2:+7037938 | MS.gene23036:CDS |
| ATAAGTTCAGTCTCGGGTCT+AGG | 0.448304 | 7.2:-7037832 | None:intergenic |
| TCTCCTTCCATATCCTTCAA+TGG | 0.455649 | 7.2:-7038702 | None:intergenic |
| AAACCAGGGATTTCTTTACT+AGG | 0.465462 | 7.2:-7038759 | None:intergenic |
| CATCCAACTATATATTGAAA+AGG | 0.469078 | 7.2:-7037760 | None:intergenic |
| AGAATGAGGATTTGAAAAGA+GGG | 0.470097 | 7.2:+7037884 | MS.gene23036:CDS |
| ATCAACAATAAGTTCAGTCT+CGG | 0.472440 | 7.2:-7037839 | None:intergenic |
| TGATGTTGTTTCAAAGAATG+AGG | 0.473095 | 7.2:+7037870 | MS.gene23036:CDS |
| ATGTGAGCATTGGAAGGATC+TGG | 0.474327 | 7.2:+7037780 | MS.gene23036:CDS |
| ATCGTGGTTGGAACCATTGA+AGG | 0.481564 | 7.2:+7038689 | MS.gene23036:CDS |
| GAAAATGAAGGCAGATATAG+AGG | 0.483718 | 7.2:+7037696 | MS.gene23036:CDS |
| CCAACTTCAGCTTGTAAACC+AGG | 0.490862 | 7.2:-7038774 | None:intergenic |
| GATATGGAAGGAGAGCTTGC+AGG | 0.490970 | 7.2:+7038711 | MS.gene23036:CDS |
| GCATTAGATGGAGGCATTGA+CGG | 0.498672 | 7.2:+7038816 | MS.gene23036:CDS |
| TATATTGTTTGTGGAAGCAA+AGG | 0.499336 | 7.2:+7037722 | MS.gene23036:CDS |
| GTTTGGGCTGATTTAGGGAC+TGG | 0.499341 | 7.2:+7037907 | MS.gene23036:CDS |
| TCTTGCTATTGGCATTGGTA+GGG | 0.505840 | 7.2:+7037939 | MS.gene23036:CDS |
| GGTGCTCTTGCTATTGGCAT+TGG | 0.506195 | 7.2:+7037934 | MS.gene23036:CDS |
| GCTGATTTAGGGACTGGAAG+TGG | 0.510435 | 7.2:+7037913 | MS.gene23036:CDS |
| CCTCCATCTAATGCAGCTCT+AGG | 0.520472 | 7.2:-7038807 | None:intergenic |
| CCTGGTTTACAAGCTGAAGT+TGG | 0.522001 | 7.2:+7038774 | MS.gene23036:CDS |
| ATAGGACAAAATTGAACTAA+GGG | 0.525603 | 7.2:+7038662 | MS.gene23036:intron |
| GAATGAGGATTTGAAAAGAG+GGG | 0.534849 | 7.2:+7037885 | MS.gene23036:CDS |
| TCAACAATAAGTTCAGTCTC+GGG | 0.535769 | 7.2:-7037838 | None:intergenic |
| GAGAGAACTTTCTCAGAACA+AGG | 0.537416 | 7.2:-7038919 | None:intergenic |
| TGCGTCTGATTTAAGTCCTG+TGG | 0.541215 | 7.2:+7037987 | MS.gene23036:CDS |
| CTTTACTAGGTATATAAGGT+GGG | 0.543420 | 7.2:-7038746 | None:intergenic |
| TCTTTACTAGGTATATAAGG+TGG | 0.544514 | 7.2:-7038747 | None:intergenic |
| ATATAGTTGGATGTGAGCAT+TGG | 0.548726 | 7.2:+7037770 | MS.gene23036:CDS |
| GGAAGCAAAGGATTGAAGAA+AGG | 0.552507 | 7.2:+7037734 | MS.gene23036:CDS |
| GACAAAATTGAACTAAGGGA+AGG | 0.563320 | 7.2:+7038666 | MS.gene23036:CDS |
| AATCAGCCCCATCACACAGA+TGG | 0.567470 | 7.2:-7038854 | None:intergenic |
| TAACGAGAGGGTGAAAATGA+AGG | 0.569662 | 7.2:+7037684 | MS.gene23036:CDS |
| AGATGGAGGCATTGACGGCA+TGG | 0.569695 | 7.2:+7038821 | MS.gene23036:CDS |
| CCTGCAACAGCAACAGCCAC+AGG | 0.572564 | 7.2:-7038003 | None:intergenic |
| TTGCAGGTTACAATGTTCAA+AGG | 0.574872 | 7.2:+7038019 | MS.gene23036:CDS |
| ATACCTAGTAAAGAAATCCC+TGG | 0.585711 | 7.2:+7038756 | MS.gene23036:CDS |
| ACTAAGGGAAGGATCGTGGT+TGG | 0.600071 | 7.2:+7038677 | MS.gene23036:CDS |
| GATTTAATGTTGAAACCTGG+TGG | 0.601736 | 7.2:+7038873 | MS.gene23036:CDS |
| AGTTGGATGTGAGCATTGGA+AGG | 0.610910 | 7.2:+7037774 | MS.gene23036:CDS |
| CAACTTCAGCTTGTAAACCA+GGG | 0.612273 | 7.2:-7038773 | None:intergenic |
| AGAGAACTTTCTCAGAACAA+GGG | 0.628098 | 7.2:-7038918 | None:intergenic |
| TTGAACTAAGGGAAGGATCG+TGG | 0.632197 | 7.2:+7038673 | MS.gene23036:CDS |
| CCTAGAGCTGCATTAGATGG+AGG | 0.633012 | 7.2:+7038807 | MS.gene23036:CDS |
| GAACCATTGAAGGATATGGA+AGG | 0.635010 | 7.2:+7038699 | MS.gene23036:CDS |
| TCAAAGGCAAAGAATCCACC+AGG | 0.637225 | 7.2:-7038888 | None:intergenic |
| TCTTCTCCATCTGTGTGATG+GGG | 0.643897 | 7.2:+7038848 | MS.gene23036:CDS |
| GCTGATTTAATGTTGAAACC+TGG | 0.657874 | 7.2:+7038870 | MS.gene23036:CDS |
| GAACAAGGGACATACCTCAA+AGG | 0.670183 | 7.2:-7038904 | None:intergenic |
| ATATGGGTGACGATAACGAG+AGG | 0.704984 | 7.2:+7037671 | None:intergenic |
| TATGGGTGACGATAACGAGA+GGG | 0.707288 | 7.2:+7037672 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAATTATAAGCAA+AGG | - | chr7.2:7038342-7038361 | None:intergenic | 10.0% |
| !!! | ATAAAGTAATTTAAAATTGT+TGG | + | chr7.2:7038551-7038570 | MS.gene23036:intron | 10.0% |
| !! | TAATAGGAATTTAAATCATA+TGG | - | chr7.2:7038399-7038418 | None:intergenic | 15.0% |
| !! | TTATGTTAATCATCATTTAT+AGG | + | chr7.2:7038644-7038663 | MS.gene23036:intron | 15.0% |
| !!! | AAGTATGTTAATTTAAAATC+AGG | + | chr7.2:7038525-7038544 | MS.gene23036:intron | 15.0% |
| !! | ATAAAAGAGAATGTAAAACA+TGG | - | chr7.2:7038081-7038100 | None:intergenic | 20.0% |
| !! | ATTTCTTTACTAGGTATATA+AGG | - | chr7.2:7038753-7038772 | None:intergenic | 20.0% |
| !! | TAAATGATGATTAACATAAG+TGG | - | chr7.2:7038643-7038662 | None:intergenic | 20.0% |
| !!! | AAACCTTTTCAATATATAGT+TGG | + | chr7.2:7037757-7037776 | MS.gene23036:CDS | 20.0% |
| !!! | ATATAAGTCAATTTTGTATC+TGG | + | chr7.2:7038116-7038135 | MS.gene23036:intron | 20.0% |
| !!! | ATGCTATTTAGTAAAAATCA+AGG | + | chr7.2:7038265-7038284 | MS.gene23036:intron | 20.0% |
| !!! | GTGAGAAATTACATTTTAAA+GGG | - | chr7.2:7038615-7038634 | None:intergenic | 20.0% |
| !!! | TTTTATAAACATACTGAAAC+TGG | + | chr7.2:7038353-7038372 | MS.gene23036:intron | 20.0% |
| ! | AAAAACATGAACCATGAAAT+TGG | - | chr7.2:7038423-7038442 | None:intergenic | 25.0% |
| ! | AATTTAAATCATATGGTAGG+TGG | - | chr7.2:7038392-7038411 | None:intergenic | 25.0% |
| ! | AGGAATTTAAATCATATGGT+AGG | - | chr7.2:7038395-7038414 | None:intergenic | 25.0% |
| ! | ATAGGACAAAATTGAACTAA+GGG | + | chr7.2:7038662-7038681 | MS.gene23036:intron | 25.0% |
| ! | ATTCCTATTATCCAATTTCA+TGG | + | chr7.2:7038409-7038428 | MS.gene23036:intron | 25.0% |
| ! | CATCCAACTATATATTGAAA+AGG | - | chr7.2:7037763-7037782 | None:intergenic | 25.0% |
| ! | TATAGGACAAAATTGAACTA+AGG | + | chr7.2:7038661-7038680 | MS.gene23036:intron | 25.0% |
| !! | GGTGAGAAATTACATTTTAA+AGG | - | chr7.2:7038616-7038635 | None:intergenic | 25.0% |
| !! | GTCTTTTTGTTAAGTTCAAA+CGG | - | chr7.2:7038212-7038231 | None:intergenic | 25.0% |
| !!! | ATTACATTTTAAAGGGAACA+TGG | - | chr7.2:7038608-7038627 | None:intergenic | 25.0% |
| AACATACAACATGAGATGAA+AGG | - | chr7.2:7038462-7038481 | None:intergenic | 30.0% | |
| AAGAATGAGGATTTGAAAAG+AGG | + | chr7.2:7037883-7037902 | MS.gene23036:CDS | 30.0% | |
| AAGCAAAGATAGTAGATTTC+AGG | - | chr7.2:7038306-7038325 | None:intergenic | 30.0% | |
| AGAATGAGGATTTGAAAAGA+GGG | + | chr7.2:7037884-7037903 | MS.gene23036:CDS | 30.0% | |
| ATCAACAATAAGTTCAGTCT+CGG | - | chr7.2:7037842-7037861 | None:intergenic | 30.0% | |
| ATGATTAACATAAGTGGAAC+TGG | - | chr7.2:7038637-7038656 | None:intergenic | 30.0% | |
| CTTTACTAGGTATATAAGGT+GGG | - | chr7.2:7038749-7038768 | None:intergenic | 30.0% | |
| GAACCATGAAATTGGATAAT+AGG | - | chr7.2:7038415-7038434 | None:intergenic | 30.0% | |
| TAGAGGAACTATATTGTTTG+TGG | + | chr7.2:7037713-7037732 | MS.gene23036:CDS | 30.0% | |
| TATATTGTTTGTGGAAGCAA+AGG | + | chr7.2:7037722-7037741 | MS.gene23036:CDS | 30.0% | |
| TCTTTACTAGGTATATAAGG+TGG | - | chr7.2:7038750-7038769 | None:intergenic | 30.0% | |
| TTGCAACACATCAATCAAAA+TGG | - | chr7.2:7038234-7038253 | None:intergenic | 30.0% | |
| ! | GACTGAACTTATTGTTGATT+TGG | + | chr7.2:7037843-7037862 | MS.gene23036:CDS | 30.0% |
| !! | TGATGTTGTTTCAAAGAATG+AGG | + | chr7.2:7037870-7037889 | MS.gene23036:CDS | 30.0% |
| AAACCAGGGATTTCTTTACT+AGG | - | chr7.2:7038762-7038781 | None:intergenic | 35.0% | |
| ATACCTAGTAAAGAAATCCC+TGG | + | chr7.2:7038756-7038775 | MS.gene23036:CDS | 35.0% | |
| ATATAGTTGGATGTGAGCAT+TGG | + | chr7.2:7037770-7037789 | MS.gene23036:CDS | 35.0% | |
| GAAAATGAAGGCAGATATAG+AGG | + | chr7.2:7037696-7037715 | MS.gene23036:CDS | 35.0% | |
| GAATGAGGATTTGAAAAGAG+GGG | + | chr7.2:7037885-7037904 | MS.gene23036:CDS | 35.0% | |
| GACAAAATTGAACTAAGGGA+AGG | + | chr7.2:7038666-7038685 | MS.gene23036:CDS | 35.0% | |
| GATTGATGTGTTGCAATTTC+AGG | + | chr7.2:7038238-7038257 | MS.gene23036:intron | 35.0% | |
| GATTTAATGTTGAAACCTGG+TGG | + | chr7.2:7038873-7038892 | MS.gene23036:CDS | 35.0% | |
| TCAACAATAAGTTCAGTCTC+GGG | - | chr7.2:7037841-7037860 | None:intergenic | 35.0% | |
| TTGCAGGTTACAATGTTCAA+AGG | + | chr7.2:7038019-7038038 | MS.gene23036:CDS | 35.0% | |
| TTTGTCTTCGAGTCATAATC+AGG | + | chr7.2:7038490-7038509 | MS.gene23036:intron | 35.0% | |
| ! | GCTGATTTAATGTTGAAACC+TGG | + | chr7.2:7038870-7038889 | MS.gene23036:CDS | 35.0% |
| !! | TGTTCAAAGGTATTCTTTGC+AGG | + | chr7.2:7038032-7038051 | MS.gene23036:CDS | 35.0% |
| !!! | TGGTTTTGAGTGTTCAAGAA+GGG | + | chr7.2:7037800-7037819 | MS.gene23036:CDS | 35.0% |
| AGGATTTGAAAAGAGGGGTT+TGG | + | chr7.2:7037890-7037909 | MS.gene23036:CDS | 40.0% | |
| CAACTTCAGCTTGTAAACCA+GGG | - | chr7.2:7038776-7038795 | None:intergenic | 40.0% | |
| GAACCATTGAAGGATATGGA+AGG | + | chr7.2:7038699-7038718 | MS.gene23036:CDS | 40.0% | |
| GGAAGCAAAGGATTGAAGAA+AGG | + | chr7.2:7037734-7037753 | MS.gene23036:CDS | 40.0% | |
| GGATTTGAAAAGAGGGGTTT+GGG | + | chr7.2:7037891-7037910 | MS.gene23036:CDS | 40.0% | |
| GTTGGAACCATTGAAGGATA+TGG | + | chr7.2:7038695-7038714 | MS.gene23036:CDS | 40.0% | |
| TAACGAGAGGGTGAAAATGA+AGG | + | chr7.2:7037684-7037703 | MS.gene23036:CDS | 40.0% | |
| TCTCCTTCCATATCCTTCAA+TGG | - | chr7.2:7038705-7038724 | None:intergenic | 40.0% | |
| ! | CAATTTTGTATCTGGAGACG+TGG | + | chr7.2:7038124-7038143 | MS.gene23036:intron | 40.0% |
| !! | TCTTGCTATTGGCATTGGTA+GGG | + | chr7.2:7037939-7037958 | MS.gene23036:CDS | 40.0% |
| !!! | ATTGGCATTGGTAGGGTTTT+AGG | + | chr7.2:7037946-7037965 | MS.gene23036:CDS | 40.0% |
| !!! | ATTGGTAGGGTTTTAGGAGA+TGG | + | chr7.2:7037952-7037971 | MS.gene23036:CDS | 40.0% |
| !!! | CTGGTTTTGAGTGTTCAAGA+AGG | + | chr7.2:7037799-7037818 | MS.gene23036:CDS | 40.0% |
| !!! | GGTTTTGAGTGTTCAAGAAG+GGG | + | chr7.2:7037801-7037820 | MS.gene23036:CDS | 40.0% |
| ATAAGTTCAGTCTCGGGTCT+AGG | - | chr7.2:7037835-7037854 | None:intergenic | 45.0% | |
| ATCGTGGTTGGAACCATTGA+AGG | + | chr7.2:7038689-7038708 | MS.gene23036:CDS | 45.0% | |
| CCAACTTCAGCTTGTAAACC+AGG | - | chr7.2:7038777-7038796 | None:intergenic | 45.0% | |
| CCTGGTTTACAAGCTGAAGT+TGG | + | chr7.2:7038774-7038793 | MS.gene23036:CDS | 45.0% | |
| CTCTTCTCCATCTGTGTGAT+GGG | + | chr7.2:7038847-7038866 | MS.gene23036:CDS | 45.0% | |
| GAACAAGGGACATACCTCAA+AGG | - | chr7.2:7038907-7038926 | None:intergenic | 45.0% | |
| GAACCTAGAGCTGCATTAGA+TGG | + | chr7.2:7038804-7038823 | MS.gene23036:CDS | 45.0% | |
| TCAAAGGCAAAGAATCCACC+AGG | - | chr7.2:7038891-7038910 | None:intergenic | 45.0% | |
| TCTTCTCCATCTGTGTGATG+GGG | + | chr7.2:7038848-7038867 | MS.gene23036:CDS | 45.0% | |
| TGCGTCTGATTTAAGTCCTG+TGG | + | chr7.2:7037987-7038006 | MS.gene23036:CDS | 45.0% | |
| TTGAACTAAGGGAAGGATCG+TGG | + | chr7.2:7038673-7038692 | MS.gene23036:CDS | 45.0% | |
| !! | AGTTGGATGTGAGCATTGGA+AGG | + | chr7.2:7037774-7037793 | MS.gene23036:CDS | 45.0% |
| !! | ATGTGAGCATTGGAAGGATC+TGG | + | chr7.2:7037780-7037799 | MS.gene23036:CDS | 45.0% |
| !! | CTCTTGCTATTGGCATTGGT+AGG | + | chr7.2:7037938-7037957 | MS.gene23036:CDS | 45.0% |
| !! | GCATTAGATGGAGGCATTGA+CGG | + | chr7.2:7038816-7038835 | MS.gene23036:CDS | 45.0% |
| !! | TGGTGGATTCTTTGCCTTTG+AGG | + | chr7.2:7038890-7038909 | MS.gene23036:CDS | 45.0% |
| !!! | GGTTTTAGGAGATGGTGGAA+AGG | + | chr7.2:7037960-7037979 | MS.gene23036:CDS | 45.0% |
| AATCAGCCCCATCACACAGA+TGG | - | chr7.2:7038857-7038876 | None:intergenic | 50.0% | |
| ACTAAGGGAAGGATCGTGGT+TGG | + | chr7.2:7038677-7038696 | MS.gene23036:CDS | 50.0% | |
| CCTAGAGCTGCATTAGATGG+AGG | + | chr7.2:7038807-7038826 | MS.gene23036:CDS | 50.0% | |
| CCTCCATCTAATGCAGCTCT+AGG | - | chr7.2:7038810-7038829 | None:intergenic | 50.0% | |
| GATATGGAAGGAGAGCTTGC+AGG | + | chr7.2:7038711-7038730 | MS.gene23036:CDS | 50.0% | |
| GCTCTTCTCCATCTGTGTGA+TGG | + | chr7.2:7038846-7038865 | MS.gene23036:CDS | 50.0% | |
| ! | AGAGGGGTTTGGGCTGATTT+AGG | + | chr7.2:7037901-7037920 | MS.gene23036:CDS | 50.0% |
| ! | GAGGGGTTTGGGCTGATTTA+GGG | + | chr7.2:7037902-7037921 | MS.gene23036:CDS | 50.0% |
| ! | GCTGATTTAGGGACTGGAAG+TGG | + | chr7.2:7037913-7037932 | MS.gene23036:CDS | 50.0% |
| ! | GGAAGTGGTGCTCTTGCTAT+TGG | + | chr7.2:7037928-7037947 | MS.gene23036:CDS | 50.0% |
| ! | GTTTGGGCTGATTTAGGGAC+TGG | + | chr7.2:7037907-7037926 | MS.gene23036:CDS | 50.0% |
| !! | GGTGCTCTTGCTATTGGCAT+TGG | + | chr7.2:7037934-7037953 | MS.gene23036:CDS | 50.0% |
| !!! | GGTAGGGTTTTAGGAGATGG+TGG | + | chr7.2:7037955-7037974 | MS.gene23036:CDS | 50.0% |
| CTGGAGACGTGGCAGTGATT+TGG | + | chr7.2:7038135-7038154 | MS.gene23036:intron | 55.0% | |
| !! | AGATGGAGGCATTGACGGCA+TGG | + | chr7.2:7038821-7038840 | MS.gene23036:CDS | 55.0% |
| CCTGCAACAGCAACAGCCAC+AGG | - | chr7.2:7038006-7038025 | None:intergenic | 60.0% | |
| ! | CCTGTGGCTGTTGCTGTTGC+AGG | + | chr7.2:7038003-7038022 | MS.gene23036:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 7037673 | 7038929 | 7037673 | ID=MS.gene23036 |
| chr7.2 | mRNA | 7037673 | 7038929 | 7037673 | ID=MS.gene23036.t1;Parent=MS.gene23036 |
| chr7.2 | exon | 7037673 | 7038053 | 7037673 | ID=MS.gene23036.t1.exon1;Parent=MS.gene23036.t1 |
| chr7.2 | CDS | 7037673 | 7038053 | 7037673 | ID=cds.MS.gene23036.t1;Parent=MS.gene23036.t1 |
| chr7.2 | exon | 7038666 | 7038929 | 7038666 | ID=MS.gene23036.t1.exon2;Parent=MS.gene23036.t1 |
| chr7.2 | CDS | 7038666 | 7038929 | 7038666 | ID=cds.MS.gene23036.t1;Parent=MS.gene23036.t1 |
| Gene Sequence |
| Protein sequence |
