Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23107.t1 | XP_003626259.1 | 97 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 2.80E-234 | 820.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23107.t1 | Q3E6S8 | 61.9 | 425 | 143 | 6 | 8 | 425 | 14 | 426 | 1.2e-140 | 501.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23107.t1 | A2Q336 | 97.0 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 2.1e-234 | 820.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050896 | MS.gene23107 | 0.984999 | 3.20E-162 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23107 | MS.gene004101 | PPI |
| MS.gene23107 | MS.gene036453 | PPI |
| MS.gene67376 | MS.gene23107 | PPI |
| MS.gene23107 | MS.gene021049 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23107.t1 | MTR_7g113170 | 96.963 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 0.0 | 838 |
| MS.gene23107.t1 | MTR_7g113170 | 96.936 | 359 | 11 | 0 | 1 | 359 | 6 | 364 | 0.0 | 705 |
| MS.gene23107.t1 | MTR_6g007030 | 30.293 | 307 | 170 | 10 | 123 | 408 | 128 | 411 | 5.44e-32 | 126 |
| MS.gene23107.t1 | MTR_6g011810 | 28.571 | 308 | 182 | 10 | 142 | 425 | 165 | 458 | 2.90e-30 | 122 |
| MS.gene23107.t1 | MTR_2g019140 | 35.519 | 183 | 108 | 5 | 142 | 315 | 133 | 314 | 2.58e-22 | 97.4 |
| MS.gene23107.t1 | MTR_5g464730 | 29.740 | 269 | 145 | 7 | 173 | 411 | 93 | 347 | 1.40e-20 | 93.2 |
| MS.gene23107.t1 | MTR_5g064160 | 27.143 | 280 | 159 | 7 | 162 | 410 | 137 | 402 | 2.49e-19 | 90.1 |
| MS.gene23107.t1 | MTR_5g064160 | 27.046 | 281 | 160 | 7 | 162 | 411 | 102 | 368 | 2.55e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23107.t1 | AT5G27660 | 62.824 | 425 | 145 | 5 | 8 | 425 | 14 | 432 | 0.0 | 525 |
| MS.gene23107.t1 | AT5G27660 | 61.882 | 425 | 143 | 6 | 8 | 425 | 9 | 421 | 1.12e-180 | 510 |
| MS.gene23107.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 123 | 424 | 135 | 439 | 1.34e-33 | 131 |
| MS.gene23107.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 123 | 424 | 135 | 439 | 1.34e-33 | 131 |
| MS.gene23107.t1 | AT5G39830 | 29.545 | 308 | 179 | 10 | 142 | 425 | 155 | 448 | 2.52e-31 | 125 |
| MS.gene23107.t1 | AT5G39830 | 28.525 | 305 | 172 | 10 | 142 | 425 | 155 | 434 | 7.82e-27 | 112 |
| MS.gene23107.t1 | AT4G18370 | 36.458 | 192 | 110 | 6 | 142 | 323 | 131 | 320 | 1.85e-21 | 95.1 |
Find 127 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTCCCTAATGTCAATA+AGG | 0.269170 | 7.1:-3162840 | MS.gene23107:CDS |
| TGTATGGCACAGGGAAATTC+TGG | 0.299439 | 7.1:-3163365 | MS.gene23107:intron |
| TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | 7.1:-3165438 | MS.gene23107:CDS |
| ATTGGCTTTGTAGATTTCTA+TGG | 0.309418 | 7.1:-3165221 | MS.gene23107:intron |
| TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | 7.1:-3163345 | MS.gene23107:CDS |
| CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | 7.1:-3163789 | MS.gene23107:CDS |
| TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | 7.1:-3163540 | MS.gene23107:CDS |
| TGCGACTTTAACTGTGATTC+CGG | 0.336668 | 7.1:-3161492 | MS.gene23107:CDS |
| AGAATGCCCTTATTGACATT+AGG | 0.346180 | 7.1:+3162833 | None:intergenic |
| GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | 7.1:-3161981 | MS.gene23107:CDS |
| GAATGCCCTTATTGACATTA+GGG | 0.359755 | 7.1:+3162834 | None:intergenic |
| AAGCCATCTAAGGATACTTT+TGG | 0.364970 | 7.1:-3165386 | MS.gene23107:CDS |
| GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | 7.1:-3163539 | MS.gene23107:CDS |
| GACATGTCTAAGGAAACTTC+TGG | 0.371904 | 7.1:-3165428 | MS.gene23107:CDS |
| ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | 7.1:+3163502 | None:intergenic |
| TGATGAATCAAAGCCATCTA+AGG | 0.379781 | 7.1:-3165396 | MS.gene23107:CDS |
| AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | 7.1:-3163530 | MS.gene23107:CDS |
| GATGTTGTCATTGAATTTGA+TGG | 0.389841 | 7.1:-3161945 | MS.gene23107:CDS |
| AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | 7.1:-3165450 | MS.gene23107:CDS |
| TTGAACACAAACCTTCCCTT+TGG | 0.396372 | 7.1:+3165091 | None:intergenic |
| AAATGATGGTGGACAAAGTT+GGG | 0.397529 | 7.1:-3161556 | MS.gene23107:CDS |
| TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | 7.1:-3163788 | MS.gene23107:CDS |
| CAAAGCTTGGTTCTTCAACT+AGG | 0.415056 | 7.1:-3163807 | MS.gene23107:CDS |
| CCAAGCTTTGCTTCCGGAAG+TGG | 0.420101 | 7.1:+3163820 | None:intergenic |
| AAATTCTGAAACCCCACTTC+CGG | 0.423531 | 7.1:-3163833 | MS.gene23107:CDS |
| CAAGATGGAAGGACATTTGA+GGG | 0.423591 | 7.1:-3163904 | MS.gene23107:CDS |
| CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | 7.1:-3163795 | MS.gene23107:CDS |
| CGGAACCCAGCACGATCACC+AGG | 0.431496 | 7.1:+3161975 | None:intergenic |
| TGCCATTGCAAGATATATCA+TGG | 0.437451 | 7.1:-3165661 | MS.gene23107:CDS |
| CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | 7.1:+3165383 | None:intergenic |
| TCATTCCCTAATGTCAATAA+GGG | 0.444524 | 7.1:-3162839 | MS.gene23107:CDS |
| GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | 7.1:-3161468 | None:intergenic |
| AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | 7.1:+3161463 | None:intergenic |
| GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | 7.1:-3161980 | MS.gene23107:CDS |
| ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | 7.1:+3165971 | None:intergenic |
| ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | 7.1:-3165427 | MS.gene23107:CDS |
| GAAGAACCAAGCTTTGCTTC+CGG | 0.472595 | 7.1:+3163814 | None:intergenic |
| GTGGACGTAACAAATCAAAC+GGG | 0.472824 | 7.1:+3165624 | None:intergenic |
| TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | 7.1:-3165197 | MS.gene23107:CDS |
| GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | 7.1:-3161570 | MS.gene23107:intron |
| TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | 7.1:-3161993 | MS.gene23107:CDS |
| AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | 7.1:-3163291 | MS.gene23107:CDS |
| TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | 7.1:+3165437 | None:intergenic |
| ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | 7.1:-3163233 | MS.gene23107:CDS |
| TGTGGACGTAACAAATCAAA+CGG | 0.478244 | 7.1:+3165623 | None:intergenic |
| GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | 7.1:-3163290 | MS.gene23107:CDS |
| GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | 7.1:+3165443 | None:intergenic |
| TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | 7.1:+3161917 | None:intergenic |
| CAAGCTTTGCTTCCGGAAGT+GGG | 0.491393 | 7.1:+3163821 | None:intergenic |
| AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | 7.1:-3166026 | MS.gene23107:CDS |
| GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | 7.1:-3161969 | MS.gene23107:CDS |
| GCAAGATGGAAGGACATTTG+AGG | 0.500220 | 7.1:-3163905 | MS.gene23107:CDS |
| ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | 7.1:-3163919 | MS.gene23107:CDS |
| CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | 7.1:-3163776 | MS.gene23107:CDS |
| ATCGAAATATTAACAACAGC+AGG | 0.506520 | 7.1:+3165326 | None:intergenic |
| CCACTTCCGGAAGCAAAGCT+TGG | 0.510741 | 7.1:-3163820 | MS.gene23107:CDS |
| AAGGACATTTGAGGGGAAAG+TGG | 0.512120 | 7.1:-3163896 | MS.gene23107:CDS |
| AGAGTGATACGGCCATGGCT+TGG | 0.514213 | 7.1:-3162920 | MS.gene23107:CDS |
| GGAACAATCATTAACAAAGA+TGG | 0.515974 | 7.1:-3165170 | MS.gene23107:CDS |
| ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | 7.1:-3163296 | MS.gene23107:CDS |
| TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | 7.1:-3163794 | MS.gene23107:CDS |
| AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | 7.1:-3166027 | MS.gene23107:CDS |
| GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | 7.1:-3165350 | MS.gene23107:CDS |
| GAAATGATGGTGGACAAAGT+TGG | 0.526009 | 7.1:-3161557 | MS.gene23107:CDS |
| ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | 7.1:+3161918 | None:intergenic |
| GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | 7.1:-3165106 | MS.gene23107:CDS |
| CATGAAAATCAACGACAACA+TGG | 0.539853 | 7.1:+3165129 | None:intergenic |
| TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | 7.1:-3163796 | MS.gene23107:CDS |
| TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | 7.1:-3162925 | MS.gene23107:intron |
| ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | 7.1:-3165191 | MS.gene23107:CDS |
| CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | 7.1:-3163729 | MS.gene23107:intron |
| CATGGCTATTACCCAATCCC+CGG | 0.547015 | 7.1:+3163777 | None:intergenic |
| AAGGGAATGCGGACAACCCA+TGG | 0.551296 | 7.1:+3163759 | None:intergenic |
| GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | 7.1:-3165107 | MS.gene23107:CDS |
| TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | 7.1:-3162822 | MS.gene23107:intron |
| TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | 7.1:-3166035 | MS.gene23107:CDS |
| GGGCCACTTGTCAATATGGA+TGG | 0.558327 | 7.1:-3163341 | MS.gene23107:CDS |
| CTTCAGAATACTGTCACTGC+TGG | 0.562372 | 7.1:-3163739 | MS.gene23107:CDS |
| TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | 7.1:-3163232 | MS.gene23107:intron |
| ACACACAGAGTCGATTGGTA+CGG | 0.565045 | 7.1:+3163262 | None:intergenic |
| AGATATATCATGGTTGACAT+TGG | 0.565755 | 7.1:-3165651 | MS.gene23107:CDS |
| AACCATGATATATCTTGCAA+TGG | 0.566757 | 7.1:+3165659 | None:intergenic |
| GATATATCTTGCAATGGCAA+AGG | 0.570631 | 7.1:+3165665 | None:intergenic |
| CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | 7.1:+3163740 | None:intergenic |
| TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | 7.1:-3165691 | MS.gene23107:CDS |
| AATATGGATGGAGAAATTGT+TGG | 0.576439 | 7.1:-3163329 | MS.gene23107:CDS |
| TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | 7.1:+3163503 | None:intergenic |
| AACGATACCCACAGCTCCAA+CGG | 0.578717 | 7.1:+3166019 | None:intergenic |
| GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | 7.1:-3166011 | MS.gene23107:CDS |
| AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | 7.1:+3161473 | None:intergenic |
| AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | 7.1:-3163915 | MS.gene23107:CDS |
| GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | 7.1:-3163775 | MS.gene23107:CDS |
| ATGAAAATCAACGACAACAT+GGG | 0.587711 | 7.1:+3165130 | None:intergenic |
| AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | 7.1:-3165102 | MS.gene23107:intron |
| ATGGCTATTACCCAATCCCC+GGG | 0.595774 | 7.1:+3163778 | None:intergenic |
| TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | 7.1:-3163295 | MS.gene23107:CDS |
| GAACCCAGCACGATCACCAG+GGG | 0.600193 | 7.1:+3161977 | None:intergenic |
| GCACGATCACCAGGGGACCC+AGG | 0.601429 | 7.1:+3161984 | None:intergenic |
| ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | 7.1:+3165964 | None:intergenic |
| TCTCCATCCATATTGACAAG+TGG | 0.603386 | 7.1:+3163338 | None:intergenic |
| CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | 7.1:-3161543 | MS.gene23107:CDS |
| AACAGATTGTGCAATTAATG+TGG | 0.605597 | 7.1:-3163486 | MS.gene23107:intron |
| CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | 7.1:-3165426 | MS.gene23107:CDS |
| TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | 7.1:-3161934 | MS.gene23107:CDS |
| TGGTCGAAAGACGACAAATG+TGG | 0.613228 | 7.1:+3165605 | None:intergenic |
| AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | 7.1:-3161922 | MS.gene23107:CDS |
| AAGCTTTGCTTCCGGAAGTG+GGG | 0.621714 | 7.1:+3163822 | None:intergenic |
| TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | 7.1:-3165599 | MS.gene23107:intron |
| AATTCAATGACAACATCACC+AGG | 0.627515 | 7.1:+3161951 | None:intergenic |
| AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | 7.1:+3162908 | None:intergenic |
| AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | 7.1:+3163741 | None:intergenic |
| GTTAATATTTCGATTCCACA+AGG | 0.645580 | 7.1:-3165317 | MS.gene23107:intron |
| AGAAAGAGGACAAACCATGT+TGG | 0.646314 | 7.1:+3165585 | None:intergenic |
| GGAACCCAGCACGATCACCA+GGG | 0.647337 | 7.1:+3161976 | None:intergenic |
| GACTTTAACTGTGATTCCGG+AGG | 0.651382 | 7.1:-3161489 | MS.gene23107:CDS |
| ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | 7.1:+3163748 | None:intergenic |
| ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | 7.1:-3163362 | MS.gene23107:intron |
| CAATGACAACATCACCAGGA+CGG | 0.663393 | 7.1:+3161955 | None:intergenic |
| GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | 7.1:-3161919 | MS.gene23107:intron |
| GCAGGTTATTGAAATGATGG+TGG | 0.673889 | 7.1:-3161567 | MS.gene23107:intron |
| AGTGAACATCATGAAAGTGT+TGG | 0.676552 | 7.1:-3163306 | MS.gene23107:CDS |
| ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | 7.1:+3165444 | None:intergenic |
| TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | 7.1:-3163361 | MS.gene23107:intron |
| AAGATGGAAGGACATTTGAG+GGG | 0.693003 | 7.1:-3163903 | MS.gene23107:CDS |
| AATGATGGTGGACAAAGTTG+GGG | 0.709009 | 7.1:-3161555 | MS.gene23107:CDS |
| ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | 7.1:-3165425 | MS.gene23107:CDS |
| TGGACGTAACAAATCAAACG+GGG | 0.745894 | 7.1:+3165625 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAGTAAAAGAAAAT+AGG | + | chr7.1:3163863-3163882 | None:intergenic | 10.0% |
| !!! | TTTTTTTATAACAATAACAA+CGG | - | chr7.1:3165263-3165282 | MS.gene23107:intron | 10.0% |
| !! | AAGATAAAATAAAATGATCT+GGG | - | chr7.1:3165690-3165709 | MS.gene23107:CDS | 15.0% |
| !! | TAAGATAAAATAAAATGATC+TGG | - | chr7.1:3165689-3165708 | MS.gene23107:CDS | 15.0% |
| !! | TAATCTTGAAATAAAGTTAA+TGG | - | chr7.1:3161604-3161623 | MS.gene23107:intron | 15.0% |
| !!! | TATTTTCAGAATAATTTTCT+AGG | + | chr7.1:3165032-3165051 | None:intergenic | 15.0% |
| !! | AAAATTACACAAAACATAAG+CGG | + | chr7.1:3165343-3165362 | None:intergenic | 20.0% |
| !! | AAGAAATATATCTTGAATTG+TGG | + | chr7.1:3162975-3162994 | None:intergenic | 20.0% |
| !! | AATAATCAATTCATCTAACA+TGG | - | chr7.1:3161796-3161815 | MS.gene23107:intron | 20.0% |
| !! | AGATAAAATAAAATGATCTG+GGG | - | chr7.1:3165691-3165710 | MS.gene23107:CDS | 20.0% |
| !! | CAAACTTATACTAATCTTTA+GGG | - | chr7.1:3165759-3165778 | MS.gene23107:intron | 20.0% |
| !! | GATCATAATATATCCATAAA+AGG | + | chr7.1:3164476-3164495 | None:intergenic | 20.0% |
| !! | TATTGATATTCTTATGTTGT+AGG | - | chr7.1:3163356-3163375 | MS.gene23107:CDS | 20.0% |
| !! | TGTTAAATCTAACATTGAAA+TGG | + | chr7.1:3163889-3163908 | None:intergenic | 20.0% |
| !!! | AAATTTAAACGTTTTTGACT+AGG | - | chr7.1:3165507-3165526 | MS.gene23107:intron | 20.0% |
| !!! | AGTAAACTTTTTTTCTTTTC+AGG | - | chr7.1:3164576-3164595 | MS.gene23107:intron | 20.0% |
| !!! | ATTTAGAACTGAAAATTTGT+AGG | - | chr7.1:3162022-3162041 | MS.gene23107:intron | 20.0% |
| !!! | CTGATTTTTTAAATGTCTTT+TGG | - | chr7.1:3163913-3163932 | MS.gene23107:CDS | 20.0% |
| !!! | TTCATGTATTGTATGATTTT+TGG | - | chr7.1:3163945-3163964 | MS.gene23107:intron | 20.0% |
| !!! | TTTAGAACTGAAAATTTGTA+GGG | - | chr7.1:3162023-3162042 | MS.gene23107:intron | 20.0% |
| ! | AAAGAAAATAGGTTAAAACC+AGG | + | chr7.1:3163852-3163871 | None:intergenic | 25.0% |
| ! | AATTCAATTGTTAGAGTGAT+AGG | + | chr7.1:3163093-3163112 | None:intergenic | 25.0% |
| ! | AGGATGTTAAGAAAGATAAA+GGG | + | chr7.1:3163191-3163210 | None:intergenic | 25.0% |
| ! | ATATCAATAACCAATTGTTC+TGG | + | chr7.1:3163345-3163364 | None:intergenic | 25.0% |
| ! | ATTACAAATCAAAGAGAAGA+TGG | - | chr7.1:3165151-3165170 | MS.gene23107:CDS | 25.0% |
| ! | CATAATGAAGAATAATCTCA+CGG | + | chr7.1:3165883-3165902 | None:intergenic | 25.0% |
| ! | CATCTAAAGATCGATTAATT+GGG | + | chr7.1:3164729-3164748 | None:intergenic | 25.0% |
| ! | CCAAACTTATACTAATCTTT+AGG | - | chr7.1:3165758-3165777 | MS.gene23107:intron | 25.0% |
| ! | CCTAAAGATTAGTATAAGTT+TGG | + | chr7.1:3165761-3165780 | None:intergenic | 25.0% |
| ! | GTCAATCAAAATTGTTTATG+CGG | + | chr7.1:3164498-3164517 | None:intergenic | 25.0% |
| ! | TATTAAAAGTGAATGTGGAA+AGG | + | chr7.1:3163125-3163144 | None:intergenic | 25.0% |
| ! | TGGTATATACTAACTAGTTA+TGG | + | chr7.1:3162955-3162974 | None:intergenic | 25.0% |
| ! | TTCAGATTGTCACATATAAA+CGG | + | chr7.1:3164397-3164416 | None:intergenic | 25.0% |
| ! | TTTGATCTATCAATAAGATG+AGG | + | chr7.1:3165057-3165076 | None:intergenic | 25.0% |
| !! | ATACTTGTTACTATCATACT+TGG | - | chr7.1:3164974-3164993 | MS.gene23107:intron | 25.0% |
| !! | CTTACAATTTTCACCTTTTA+TGG | - | chr7.1:3164460-3164479 | MS.gene23107:intron | 25.0% |
| !! | TTGAGTCTTAAATGATTTTC+AGG | + | chr7.1:3163465-3163484 | None:intergenic | 25.0% |
| !! | TTGATTGACATACTTTTATG+TGG | - | chr7.1:3164509-3164528 | MS.gene23107:intron | 25.0% |
| !!! | CCACATTCACTTTTAATAAT+GGG | - | chr7.1:3163127-3163146 | MS.gene23107:intron | 25.0% |
| !!! | TCCACATTCACTTTTAATAA+TGG | - | chr7.1:3163126-3163145 | MS.gene23107:intron | 25.0% |
| AACAGATTGTGCAATTAATG+TGG | - | chr7.1:3164033-3164052 | MS.gene23107:intron | 30.0% | |
| AACCATGATATATCTTGCAA+TGG | + | chr7.1:3161863-3161882 | None:intergenic | 30.0% | |
| AACGATTCATTCAGATGAAA+AGG | + | chr7.1:3162236-3162255 | None:intergenic | 30.0% | |
| AAGTGAACACAAAAACAAAG+AGG | - | chr7.1:3165075-3165094 | MS.gene23107:intron | 30.0% | |
| AATATGGATGGAGAAATTGT+TGG | - | chr7.1:3164190-3164209 | MS.gene23107:intron | 30.0% | |
| AATATTGACGATGCATACAA+AGG | - | chr7.1:3161760-3161779 | MS.gene23107:intron | 30.0% | |
| AATGTTGTCTAATCAGAAAG+AGG | + | chr7.1:3165299-3165318 | None:intergenic | 30.0% | |
| ACTTGTAATGAGCTTATGTA+TGG | + | chr7.1:3163246-3163265 | None:intergenic | 30.0% | |
| AGATATATCATGGTTGACAT+TGG | - | chr7.1:3161868-3161887 | MS.gene23107:intron | 30.0% | |
| AGATTTAGTTAATTGCTCAC+TGG | + | chr7.1:3161569-3161588 | None:intergenic | 30.0% | |
| ATAAACTACCCAAGTAGATA+TGG | - | chr7.1:3164082-3164101 | MS.gene23107:intron | 30.0% | |
| ATATAACTGTAGCTTGATAC+TGG | + | chr7.1:3162604-3162623 | None:intergenic | 30.0% | |
| ATATTGAGAACCAATTGATC+CGG | + | chr7.1:3163403-3163422 | None:intergenic | 30.0% | |
| ATCCATATTCCATATCTACT+TGG | + | chr7.1:3164094-3164113 | None:intergenic | 30.0% | |
| ATCGAAATATTAACAACAGC+AGG | + | chr7.1:3162196-3162215 | None:intergenic | 30.0% | |
| ATCTGTTTGTAAATACTCTC+TGG | + | chr7.1:3164020-3164039 | None:intergenic | 30.0% | |
| ATGAAAATCAACGACAACAT+GGG | + | chr7.1:3162392-3162411 | None:intergenic | 30.0% | |
| ATGATAGTTTATCATGCTGT+AGG | - | chr7.1:3163270-3163289 | MS.gene23107:CDS | 30.0% | |
| ATTAATTGGGAACATACCAT+TGG | + | chr7.1:3164716-3164735 | None:intergenic | 30.0% | |
| CAAGATTAGAGAGAAAATTG+TGG | + | chr7.1:3163158-3163177 | None:intergenic | 30.0% | |
| CATAGATGTAAAATTGTTGC+AGG | - | chr7.1:3165934-3165953 | MS.gene23107:intron | 30.0% | |
| CCCATTATTAAAAGTGAATG+TGG | + | chr7.1:3163130-3163149 | None:intergenic | 30.0% | |
| CGTAACTATCACAATTAGAA+TGG | + | chr7.1:3165229-3165248 | None:intergenic | 30.0% | |
| CTACATGAGTTAGAATAAGA+CGG | - | chr7.1:3162927-3162946 | MS.gene23107:intron | 30.0% | |
| CTAGGATTCTCACTTTAATA+GGG | + | chr7.1:3165014-3165033 | None:intergenic | 30.0% | |
| CTTGTAATGAGCTTATGTAT+GGG | + | chr7.1:3163245-3163264 | None:intergenic | 30.0% | |
| GAAAGAAAGTTCAACTGTTA+GGG | + | chr7.1:3163052-3163071 | None:intergenic | 30.0% | |
| GAAATAATGTGTTTGTCACA+AGG | - | chr7.1:3165484-3165503 | MS.gene23107:intron | 30.0% | |
| GAGGATGTTAAGAAAGATAA+AGG | + | chr7.1:3163192-3163211 | None:intergenic | 30.0% | |
| GATGTATTTGTGCAAAACTA+AGG | + | chr7.1:3162860-3162879 | None:intergenic | 30.0% | |
| GATGTTGTCATTGAATTTGA+TGG | - | chr7.1:3165574-3165593 | MS.gene23107:intron | 30.0% | |
| GCATCTAAAGATCGATTAAT+TGG | + | chr7.1:3164730-3164749 | None:intergenic | 30.0% | |
| GGAACAATCATTAACAAAGA+TGG | - | chr7.1:3162349-3162368 | MS.gene23107:intron | 30.0% | |
| GTAGATATGGAATATGGATT+TGG | - | chr7.1:3164095-3164114 | MS.gene23107:intron | 30.0% | |
| GTTAATATTTCGATTCCACA+AGG | - | chr7.1:3162202-3162221 | MS.gene23107:intron | 30.0% | |
| GTTACTATCATACTTGGATA+GGG | - | chr7.1:3164980-3164999 | MS.gene23107:intron | 30.0% | |
| TAAAAGTTCAAACCAGAAAG+AGG | + | chr7.1:3161951-3161970 | None:intergenic | 30.0% | |
| TCATTCCCTAATGTCAATAA+GGG | - | chr7.1:3164680-3164699 | MS.gene23107:intron | 30.0% | |
| TCCAAGCAGAAAGTTTAATT+AGG | - | chr7.1:3164431-3164450 | MS.gene23107:intron | 30.0% | |
| TCCATATTCCATATCTACTT+GGG | + | chr7.1:3164093-3164112 | None:intergenic | 30.0% | |
| TCTAACATGGCTTCAAATTT+AGG | - | chr7.1:3161809-3161828 | MS.gene23107:intron | 30.0% | |
| TCTGTTTGTAAATACTCTCT+GGG | + | chr7.1:3164019-3164038 | None:intergenic | 30.0% | |
| TGAAAGAAAGTTCAACTGTT+AGG | + | chr7.1:3163053-3163072 | None:intergenic | 30.0% | |
| TGGTTAATACTTGAGTAGTT+AGG | - | chr7.1:3164529-3164548 | MS.gene23107:intron | 30.0% | |
| TGTTACTATCATACTTGGAT+AGG | - | chr7.1:3164979-3164998 | MS.gene23107:intron | 30.0% | |
| TTCAAAGTTGTTTGCAAAGT+TGG | - | chr7.1:3164832-3164851 | MS.gene23107:intron | 30.0% | |
| TTCAAGACAGTGTACATATT+TGG | + | chr7.1:3162470-3162489 | None:intergenic | 30.0% | |
| TTCATTCCCTAATGTCAATA+AGG | - | chr7.1:3164679-3164698 | MS.gene23107:intron | 30.0% | |
| ! | ATAGAGCATTTCAAGAAAAG+TGG | - | chr7.1:3164286-3164305 | MS.gene23107:intron | 30.0% |
| ! | TAGAGCATTTCAAGAAAAGT+GGG | - | chr7.1:3164287-3164306 | MS.gene23107:intron | 30.0% |
| ! | TATTATGATAGTGAAGCCAT+GGG | - | chr7.1:3164935-3164954 | MS.gene23107:intron | 30.0% |
| ! | TCTAGGATTCTCACTTTAAT+AGG | + | chr7.1:3165015-3165034 | None:intergenic | 30.0% |
| ! | TTAATGGCATGCTTTTCAAT+TGG | - | chr7.1:3161620-3161639 | MS.gene23107:intron | 30.0% |
| ! | TTATTATGATAGTGAAGCCA+TGG | - | chr7.1:3164934-3164953 | MS.gene23107:intron | 30.0% |
| ! | TTTTCAGAATCTAGATTCAC+AGG | - | chr7.1:3164762-3164781 | MS.gene23107:intron | 30.0% |
| !! | ATTGGCTTTGTAGATTTCTA+TGG | - | chr7.1:3162298-3162317 | MS.gene23107:intron | 30.0% |
| !! | ATTTCTATGGTTTTGCTACA+GGG | - | chr7.1:3162311-3162330 | MS.gene23107:intron | 30.0% |
| !! | CTTTTAACTACAACCTTCAT+GGG | + | chr7.1:3165992-3166011 | None:intergenic | 30.0% |
| !! | TCTTTTAACTACAACCTTCA+TGG | + | chr7.1:3165993-3166012 | None:intergenic | 30.0% |
| !!! | TCGATTTTTTTTACTGTCTG+TGG | + | chr7.1:3165860-3165879 | None:intergenic | 30.0% |
| AAAAGTGAATGTGGAAAGGA+AGG | + | chr7.1:3163121-3163140 | None:intergenic | 35.0% | |
| AAGAAAAGTGGGTATGTTTC+TGG | - | chr7.1:3164298-3164317 | MS.gene23107:intron | 35.0% | |
| AATTCAATGACAACATCACC+AGG | + | chr7.1:3165571-3165590 | None:intergenic | 35.0% | |
| ACATGTCTAAGGAAACTTCT+GGG | - | chr7.1:3162092-3162111 | MS.gene23107:intron | 35.0% | |
| ACCCAAGTAGATATGGAATA+TGG | - | chr7.1:3164089-3164108 | MS.gene23107:intron | 35.0% | |
| ACTGGAATTAGTGTGGTTAT+CGG | + | chr7.1:3161551-3161570 | None:intergenic | 35.0% | |
| ACTGTAACAACCAAACCTTT+AGG | - | chr7.1:3162895-3162914 | MS.gene23107:CDS | 35.0% | |
| AGAATGCCCTTATTGACATT+AGG | + | chr7.1:3164689-3164708 | None:intergenic | 35.0% | |
| AGTTCAACTGTTAGGGTAAA+AGG | + | chr7.1:3163045-3163064 | None:intergenic | 35.0% | |
| AGTTCTCTGTGATGTAAATG+TGG | - | chr7.1:3162521-3162540 | MS.gene23107:intron | 35.0% | |
| ATAGTAGCTCATTTAGCTGT+AGG | - | chr7.1:3163299-3163318 | MS.gene23107:CDS | 35.0% | |
| ATCTACTTGGGTAGTTTATG+CGG | + | chr7.1:3164081-3164100 | None:intergenic | 35.0% | |
| CACATACATCTAAACATGCA+TGG | + | chr7.1:3161998-3162017 | None:intergenic | 35.0% | |
| CATGAAAATCAACGACAACA+TGG | + | chr7.1:3162393-3162412 | None:intergenic | 35.0% | |
| CTAATCAGAAAGAGGAGTAA+GGG | + | chr7.1:3165291-3165310 | None:intergenic | 35.0% | |
| CTTTGTATGACTCAAAGCTA+GGG | - | chr7.1:3162680-3162699 | MS.gene23107:intron | 35.0% | |
| GAAAAGGTAGAAAAACCTTG+TGG | + | chr7.1:3162220-3162239 | None:intergenic | 35.0% | |
| GAAGGTTTGTGTTCAAGAAA+GGG | - | chr7.1:3162435-3162454 | MS.gene23107:intron | 35.0% | |
| GAATGCCCTTATTGACATTA+GGG | + | chr7.1:3164688-3164707 | None:intergenic | 35.0% | |
| GAGCAACACAATGCATATTA+TGG | + | chr7.1:3165437-3165456 | None:intergenic | 35.0% | |
| GATATATCTTGCAATGGCAA+AGG | + | chr7.1:3161857-3161876 | None:intergenic | 35.0% | |
| GATCCATTCCCAACAAAATA+GGG | - | chr7.1:3162761-3162780 | MS.gene23107:intron | 35.0% | |
| GCCTAATTAAACTTTCTGCT+TGG | + | chr7.1:3164435-3164454 | None:intergenic | 35.0% | |
| GCTAAATGAGCTACTATACA+AGG | + | chr7.1:3163296-3163315 | None:intergenic | 35.0% | |
| GTACTTTCTGAGTCATGATT+TGG | - | chr7.1:3162729-3162748 | MS.gene23107:intron | 35.0% | |
| GTTGCAGGTTATTGAAATGA+TGG | - | chr7.1:3165949-3165968 | MS.gene23107:intron | 35.0% | |
| TAATCAGAAAGAGGAGTAAG+GGG | + | chr7.1:3165290-3165309 | None:intergenic | 35.0% | |
| TACACAAAACATAAGCGGAA+TGG | + | chr7.1:3165338-3165357 | None:intergenic | 35.0% | |
| TCTAATCAGAAAGAGGAGTA+AGG | + | chr7.1:3165292-3165311 | None:intergenic | 35.0% | |
| TGATCCATTCCCAACAAAAT+AGG | - | chr7.1:3162760-3162779 | MS.gene23107:intron | 35.0% | |
| TGATGAATCAAAGCCATCTA+AGG | - | chr7.1:3162123-3162142 | MS.gene23107:intron | 35.0% | |
| TGCCATTGCAAGATATATCA+TGG | - | chr7.1:3161858-3161877 | MS.gene23107:intron | 35.0% | |
| TGTGGACGTAACAAATCAAA+CGG | + | chr7.1:3161899-3161918 | None:intergenic | 35.0% | |
| TTGAGATTATGCTGATGGTT+TGG | - | chr7.1:3162272-3162291 | MS.gene23107:intron | 35.0% | |
| TTGCATGTTATCTGCTTGTA+TGG | - | chr7.1:3164138-3164157 | MS.gene23107:intron | 35.0% | |
| ! | AAGCAATGCCCTATTTTGTT+GGG | + | chr7.1:3162772-3162791 | None:intergenic | 35.0% |
| ! | AAGCCATCTAAGGATACTTT+TGG | - | chr7.1:3162133-3162152 | MS.gene23107:intron | 35.0% |
| ! | AGTGAACATCATGAAAGTGT+TGG | - | chr7.1:3164213-3164232 | MS.gene23107:intron | 35.0% |
| ! | ATGCAAACGAAACATGCTTT+TGG | + | chr7.1:3162571-3162590 | None:intergenic | 35.0% |
| ! | ATGTGGTAGAAGAGTACAAT+TGG | - | chr7.1:3162538-3162557 | MS.gene23107:intron | 35.0% |
| ! | ATTGAAGTCACTTTGCAAGA+TGG | - | chr7.1:3163600-3163619 | MS.gene23107:intron | 35.0% |
| ! | ATTTTACACACAGAGTCGAT+TGG | + | chr7.1:3164265-3164284 | None:intergenic | 35.0% |
| ! | TAAGCAATGCCCTATTTTGT+TGG | + | chr7.1:3162773-3162792 | None:intergenic | 35.0% |
| ! | TCGTTTTCATTCAGTTCTGT+AGG | + | chr7.1:3162815-3162834 | None:intergenic | 35.0% |
| ! | TGCAAACGAAACATGCTTTT+GGG | + | chr7.1:3162570-3162589 | None:intergenic | 35.0% |
| !! | AAATGATGGTGGACAAAGTT+GGG | - | chr7.1:3165963-3165982 | MS.gene23107:intron | 35.0% |
| !! | ATCCCAAATCACTGCTTTTA+CGG | + | chr7.1:3163985-3164004 | None:intergenic | 35.0% |
| !! | CTACCAAAAGTATCCTTAGA+TGG | + | chr7.1:3162139-3162158 | None:intergenic | 35.0% |
| !! | GATTTCTATGGTTTTGCTAC+AGG | - | chr7.1:3162310-3162329 | MS.gene23107:intron | 35.0% |
| !! | GTTGATTTTCATGGCACAAA+AGG | - | chr7.1:3162400-3162419 | MS.gene23107:intron | 35.0% |
| !! | TGCTTTCTTTTGCTATGCTT+TGG | - | chr7.1:3164894-3164913 | MS.gene23107:intron | 35.0% |
| !! | TTCTTTTCAGGAGAGTGATA+CGG | - | chr7.1:3164588-3164607 | MS.gene23107:intron | 35.0% |
| !! | TTTTTGACTAGGTAACTCCT+GGG | - | chr7.1:3165518-3165537 | MS.gene23107:intron | 35.0% |
| !!! | CATGTTGTCGTTGATTTTCA+TGG | - | chr7.1:3162391-3162410 | MS.gene23107:intron | 35.0% |
| !!! | CTCTTTTGAGATTATGCTGA+TGG | - | chr7.1:3162267-3162286 | MS.gene23107:intron | 35.0% |
| AAAAGGTTCATCCAAAGGGA+AGG | - | chr7.1:3162417-3162436 | MS.gene23107:intron | 40.0% | |
| AACAACCAAACCTTTAGGTG+AGG | - | chr7.1:3162900-3162919 | MS.gene23107:CDS | 40.0% | |
| AACGACGATTCTGTGAATTC+TGG | - | chr7.1:3162830-3162849 | MS.gene23107:CDS | 40.0% | |
| AAGATGGAAGGACATTTGAG+GGG | - | chr7.1:3163616-3163635 | MS.gene23107:intron | 40.0% | |
| AGAAAGAGGACAAACCATGT+TGG | + | chr7.1:3161937-3161956 | None:intergenic | 40.0% | |
| AGCAGTGACAGTATTCTGAA+GGG | + | chr7.1:3163781-3163800 | None:intergenic | 40.0% | |
| ATCTAAATCCCTGCTAACGT+TGG | - | chr7.1:3162997-3163016 | MS.gene23107:intron | 40.0% | |
| ATGTAGTTGACCTCACCTAA+AGG | + | chr7.1:3162913-3162932 | None:intergenic | 40.0% | |
| ATGTCTAAGGAAACTTCTGG+GGG | - | chr7.1:3162094-3162113 | MS.gene23107:intron | 40.0% | |
| ATTGCTCACTGGAATTAGTG+TGG | + | chr7.1:3161558-3161577 | None:intergenic | 40.0% | |
| CAAGATGGAAGGACATTTGA+GGG | - | chr7.1:3163615-3163634 | MS.gene23107:intron | 40.0% | |
| CACAATGCATATTATGGCAG+AGG | + | chr7.1:3165431-3165450 | None:intergenic | 40.0% | |
| CATGTCTAAGGAAACTTCTG+GGG | - | chr7.1:3162093-3162112 | MS.gene23107:intron | 40.0% | |
| CTGAAAACTCGACAGCAAAA+AGG | + | chr7.1:3163221-3163240 | None:intergenic | 40.0% | |
| GACAGCAAAAAGGCAAAATG+AGG | + | chr7.1:3163211-3163230 | None:intergenic | 40.0% | |
| GACATGTCTAAGGAAACTTC+TGG | - | chr7.1:3162091-3162110 | MS.gene23107:intron | 40.0% | |
| GACCGTAAAAGCAGTGATTT+GGG | - | chr7.1:3163980-3163999 | MS.gene23107:intron | 40.0% | |
| GCACAAAAGGTTCATCCAAA+GGG | - | chr7.1:3162413-3162432 | MS.gene23107:intron | 40.0% | |
| GCAGGTTATTGAAATGATGG+TGG | - | chr7.1:3165952-3165971 | MS.gene23107:intron | 40.0% | |
| GCTTTGTATGACTCAAAGCT+AGG | - | chr7.1:3162679-3162698 | MS.gene23107:intron | 40.0% | |
| GGAAGGTTTGTGTTCAAGAA+AGG | - | chr7.1:3162434-3162453 | MS.gene23107:intron | 40.0% | |
| GGTGCGAAGATAAAACTTTC+TGG | - | chr7.1:3163811-3163830 | MS.gene23107:CDS | 40.0% | |
| GTGGACGTAACAAATCAAAC+GGG | + | chr7.1:3161898-3161917 | None:intergenic | 40.0% | |
| TCTACTTGGGTAGTTTATGC+GGG | + | chr7.1:3164080-3164099 | None:intergenic | 40.0% | |
| TCTCCATCCATATTGACAAG+TGG | + | chr7.1:3164184-3164203 | None:intergenic | 40.0% | |
| TCTGATGTCTTCATTTCACG+AGG | + | chr7.1:3163550-3163569 | None:intergenic | 40.0% | |
| TGACCGTAAAAGCAGTGATT+TGG | - | chr7.1:3163979-3163998 | MS.gene23107:intron | 40.0% | |
| TGCGACTTTAACTGTGATTC+CGG | - | chr7.1:3166027-3166046 | MS.gene23107:CDS | 40.0% | |
| TGGACGTAACAAATCAAACG+GGG | + | chr7.1:3161897-3161916 | None:intergenic | 40.0% | |
| TTATCTGCTTGTATGGCACA+GGG | - | chr7.1:3164145-3164164 | MS.gene23107:intron | 40.0% | |
| TTCACAGGACAGTATCTTCA+TGG | - | chr7.1:3164777-3164796 | MS.gene23107:intron | 40.0% | |
| TTGAACACAAACCTTCCCTT+TGG | + | chr7.1:3162431-3162450 | None:intergenic | 40.0% | |
| TTGTGATAGTTACGTGTAGC+AGG | - | chr7.1:3165235-3165254 | MS.gene23107:intron | 40.0% | |
| ! | AACATGGTTTGTCCTCTTTC+TGG | - | chr7.1:3161936-3161955 | MS.gene23107:CDS | 40.0% |
| ! | AAGTCACTTTGCAAGATGGA+AGG | - | chr7.1:3163604-3163623 | MS.gene23107:intron | 40.0% |
| ! | ACAGTATTCTGAAGGGAATG+CGG | + | chr7.1:3163774-3163793 | None:intergenic | 40.0% |
| ! | AGCAGTGATTTGGGATTTAG+TGG | - | chr7.1:3163989-3164008 | MS.gene23107:intron | 40.0% |
| ! | ATGCCCTATTTTGTTGGGAA+TGG | + | chr7.1:3162767-3162786 | None:intergenic | 40.0% |
| ! | ATGCTGATGGTTTGGAGTAT+TGG | - | chr7.1:3162280-3162299 | MS.gene23107:intron | 40.0% |
| ! | CAAAGCTTGGTTCTTCAACT+AGG | - | chr7.1:3163712-3163731 | MS.gene23107:intron | 40.0% |
| ! | TTTGCTACAGGGAAGAGTAT+TGG | - | chr7.1:3162322-3162341 | MS.gene23107:intron | 40.0% |
| !! | AAATTCTGAAACCCCACTTC+CGG | - | chr7.1:3163686-3163705 | MS.gene23107:intron | 40.0% |
| !! | AATGATGGTGGACAAAGTTG+GGG | - | chr7.1:3165964-3165983 | MS.gene23107:intron | 40.0% |
| !! | GAAATGATGGTGGACAAAGT+TGG | - | chr7.1:3165962-3165981 | MS.gene23107:intron | 40.0% |
| !! | GTTTTTGACTAGGTAACTCC+TGG | - | chr7.1:3165517-3165536 | MS.gene23107:intron | 40.0% |
| !! | TAAGGGCATTCTTGTACCAA+TGG | - | chr7.1:3164697-3164716 | MS.gene23107:intron | 40.0% |
| !! | TTGTATAGTAGCTTGCTTGC+CGG | - | chr7.1:3163381-3163400 | MS.gene23107:intron | 40.0% |
| AAGCTGAGATTGGATTCCTC+CGG | + | chr7.1:3166049-3166068 | None:intergenic | 45.0% | |
| AAGGACATTTGAGGGGAAAG+TGG | - | chr7.1:3163623-3163642 | MS.gene23107:intron | 45.0% | |
| ACACACAGAGTCGATTGGTA+CGG | + | chr7.1:3164260-3164279 | None:intergenic | 45.0% | |
| ACATGTCCGAAGAAGGAACA+GGG | + | chr7.1:3162078-3162097 | None:intergenic | 45.0% | |
| ACTCAAAGTCCAACGTTAGC+AGG | + | chr7.1:3163009-3163028 | None:intergenic | 45.0% | |
| AGCATTCTTAGTCCAAGCCA+TGG | + | chr7.1:3164614-3164633 | None:intergenic | 45.0% | |
| AGGGTGGCTTAAGATCTGAT+GGG | - | chr7.1:3162699-3162718 | MS.gene23107:intron | 45.0% | |
| AGTGAATGTGGAAAGGAAGG+AGG | + | chr7.1:3163118-3163137 | None:intergenic | 45.0% | |
| AGTTAGCCCTGTTCCTTCTT+CGG | - | chr7.1:3162069-3162088 | MS.gene23107:intron | 45.0% | |
| CAATGACAACATCACCAGGA+CGG | + | chr7.1:3165567-3165586 | None:intergenic | 45.0% | |
| CAGCAGTGACAGTATTCTGA+AGG | + | chr7.1:3163782-3163801 | None:intergenic | 45.0% | |
| CTCAAAGTCCAACGTTAGCA+GGG | + | chr7.1:3163008-3163027 | None:intergenic | 45.0% | |
| CTGTCACTGCTGGTATTGTA+AGG | - | chr7.1:3163790-3163809 | MS.gene23107:CDS | 45.0% | |
| CTTCAGAATACTGTCACTGC+TGG | - | chr7.1:3163780-3163799 | MS.gene23107:CDS | 45.0% | |
| GAAGAACCAAGCTTTGCTTC+CGG | + | chr7.1:3163708-3163727 | None:intergenic | 45.0% | |
| GACTTTAACTGTGATTCCGG+AGG | - | chr7.1:3166030-3166049 | MS.gene23107:CDS | 45.0% | |
| GATCTGGGGAGCAAAACAAT+TGG | - | chr7.1:3165705-3165724 | MS.gene23107:intron | 45.0% | |
| GCAAATGCTGCTGCTAAAGT+TGG | - | chr7.1:3162169-3162188 | MS.gene23107:intron | 45.0% | |
| GCAAGATGGAAGGACATTTG+AGG | - | chr7.1:3163614-3163633 | MS.gene23107:intron | 45.0% | |
| GGCAAGCAAGCTACTATACA+AGG | + | chr7.1:3163382-3163401 | None:intergenic | 45.0% | |
| GGCACAAAAGGTTCATCCAA+AGG | - | chr7.1:3162412-3162431 | MS.gene23107:intron | 45.0% | |
| GTTATCTGCTTGTATGGCAC+AGG | - | chr7.1:3164144-3164163 | MS.gene23107:intron | 45.0% | |
| GTTGACCTCACCTAAAGGTT+TGG | + | chr7.1:3162908-3162927 | None:intergenic | 45.0% | |
| TACCTCCTTCATGCTTTCCA+CGG | + | chr7.1:3165605-3165624 | None:intergenic | 45.0% | |
| TACTGTTCTTGCTTGGTCTG+TGG | - | chr7.1:3162657-3162676 | MS.gene23107:intron | 45.0% | |
| TAGGGTGGCTTAAGATCTGA+TGG | - | chr7.1:3162698-3162717 | MS.gene23107:intron | 45.0% | |
| TCCTTAGACATGTCCGAAGA+AGG | + | chr7.1:3162085-3162104 | None:intergenic | 45.0% | |
| TCCTTCTTCGGACATGTCTA+AGG | - | chr7.1:3162081-3162100 | MS.gene23107:intron | 45.0% | |
| TGAATTTGATGGAAAGCCCG+TGG | - | chr7.1:3165585-3165604 | MS.gene23107:intron | 45.0% | |
| TGGCTGTAAAAGATGTCTCC+TGG | - | chr7.1:3163831-3163850 | MS.gene23107:CDS | 45.0% | |
| TGGGTAGTTTATGCGGGAAA+AGG | + | chr7.1:3164074-3164093 | None:intergenic | 45.0% | |
| TGGTCGAAAGACGACAAATG+TGG | + | chr7.1:3161917-3161936 | None:intergenic | 45.0% | |
| TGTATGACTCAAAGCTAGGG+TGG | - | chr7.1:3162683-3162702 | MS.gene23107:intron | 45.0% | |
| TGTATGGCACAGGGAAATTC+TGG | - | chr7.1:3164154-3164173 | MS.gene23107:intron | 45.0% | |
| TTGTCGTCTTTCGACCAACA+TGG | - | chr7.1:3161920-3161939 | MS.gene23107:CDS | 45.0% | |
| ! | AGCTTGCTTGCCAGAACAAT+TGG | - | chr7.1:3163332-3163351 | MS.gene23107:CDS | 45.0% |
| ! | CATTGTGTTGCTCAAATGCG+AGG | - | chr7.1:3165444-3165463 | MS.gene23107:CDS | 45.0% |
| ! | GAAGTGCTACTGTTCTTGCT+TGG | - | chr7.1:3162650-3162669 | MS.gene23107:intron | 45.0% |
| ! | TATGATAGTGAAGCCATGGG+CGG | - | chr7.1:3164938-3164957 | MS.gene23107:intron | 45.0% |
| !! | ATGAAAGTGTTGGCTGCTGA+TGG | - | chr7.1:3164223-3164242 | MS.gene23107:intron | 45.0% |
| !! | TGAAAGTGTTGGCTGCTGAT+GGG | - | chr7.1:3164224-3164243 | MS.gene23107:intron | 45.0% |
| AACGATACCCACAGCTCCAA+CGG | + | chr7.1:3161503-3161522 | None:intergenic | 50.0% | |
| AAGCTTTGCTTCCGGAAGTG+GGG | + | chr7.1:3163700-3163719 | None:intergenic | 50.0% | |
| ACCTCCTTCATGCTTTCCAC+GGG | + | chr7.1:3165604-3165623 | None:intergenic | 50.0% | |
| ATGGCACAGGGAAATTCTGG+AGG | - | chr7.1:3164157-3164176 | MS.gene23107:intron | 50.0% | |
| ATGGCTATTACCCAATCCCC+GGG | + | chr7.1:3163744-3163763 | None:intergenic | 50.0% | |
| CAAGCTTTGCTTCCGGAAGT+GGG | + | chr7.1:3163701-3163720 | None:intergenic | 50.0% | |
| CATGGCTATTACCCAATCCC+CGG | + | chr7.1:3163745-3163764 | None:intergenic | 50.0% | |
| GACATGTCCGAAGAAGGAAC+AGG | + | chr7.1:3162079-3162098 | None:intergenic | 50.0% | |
| GGGCCACTTGTCAATATGGA+TGG | - | chr7.1:3164178-3164197 | MS.gene23107:intron | 50.0% | |
| GGGGATTGGGTAATAGCCAT+GGG | - | chr7.1:3163744-3163763 | MS.gene23107:CDS | 50.0% | |
| GTAGAAGTTTGAACCGCCCA+TGG | + | chr7.1:3164954-3164973 | None:intergenic | 50.0% | |
| TAGGAACGTTCGTACGTGTG+CGG | - | chr7.1:3161828-3161847 | MS.gene23107:intron | 50.0% | |
| TCTTCAACTAGGCTTCGTCC+CGG | - | chr7.1:3163723-3163742 | MS.gene23107:intron | 50.0% | |
| TGGAGGGCCACTTGTCAATA+TGG | - | chr7.1:3164174-3164193 | MS.gene23107:intron | 50.0% | |
| TGGCACAGGGAAATTCTGGA+GGG | - | chr7.1:3164158-3164177 | MS.gene23107:intron | 50.0% | |
| TTGAACAGAAGCTCTGCCGT+TGG | - | chr7.1:3161484-3161503 | MS.gene23107:CDS | 50.0% | |
| ! | AAAGCCCGTGGAAAGCATGA+AGG | - | chr7.1:3165597-3165616 | MS.gene23107:intron | 50.0% |
| ! | AGCTTGCTTGCCGGATCAAT+TGG | - | chr7.1:3163390-3163409 | MS.gene23107:intron | 50.0% |
| !! | ACAGGGAAGAGTATTGGCTC+TGG | - | chr7.1:3162328-3162347 | MS.gene23107:intron | 50.0% |
| AAGGGAATGCGGACAACCCA+TGG | + | chr7.1:3163763-3163782 | None:intergenic | 55.0% | |
| AGAGTGATACGGCCATGGCT+TGG | - | chr7.1:3164599-3164618 | MS.gene23107:intron | 55.0% | |
| CCAAGCTTTGCTTCCGGAAG+TGG | + | chr7.1:3163702-3163721 | None:intergenic | 55.0% | |
| CCACTTCCGGAAGCAAAGCT+TGG | - | chr7.1:3163699-3163718 | MS.gene23107:intron | 55.0% | |
| CGGGGATTGGGTAATAGCCA+TGG | - | chr7.1:3163743-3163762 | MS.gene23107:CDS | 55.0% | |
| CTTCAACTAGGCTTCGTCCC+GGG | - | chr7.1:3163724-3163743 | MS.gene23107:intron | 55.0% | |
| TCAGGAGAGTGATACGGCCA+TGG | - | chr7.1:3164594-3164613 | MS.gene23107:intron | 55.0% | |
| TTCAACTAGGCTTCGTCCCG+GGG | - | chr7.1:3163725-3163744 | MS.gene23107:intron | 55.0% | |
| ! | CAAAGTTGGGGTGCCCATGA+AGG | - | chr7.1:3165976-3165995 | MS.gene23107:CDS | 55.0% |
| ! | GCTGTGGGTATCGTTGCTGT+TGG | - | chr7.1:3161508-3161527 | MS.gene23107:CDS | 55.0% |
| !! | AGTGTTGGCTGCTGATGGGT+TGG | - | chr7.1:3164228-3164247 | MS.gene23107:intron | 55.0% |
| !! | GTGTTGGCTGCTGATGGGTT+GGG | - | chr7.1:3164229-3164248 | MS.gene23107:intron | 55.0% |
| AAGCTCTGCCGTTGGAGCTG+TGG | - | chr7.1:3161492-3161511 | MS.gene23107:CDS | 60.0% | |
| AGCTCTGCCGTTGGAGCTGT+GGG | - | chr7.1:3161493-3161512 | MS.gene23107:CDS | 60.0% | |
| GAACCCAGCACGATCACCAG+GGG | + | chr7.1:3165545-3165564 | None:intergenic | 60.0% | |
| GGAACCCAGCACGATCACCA+GGG | + | chr7.1:3165546-3165565 | None:intergenic | 60.0% | |
| TAGGCTTCGTCCCGGGGATT+GGG | - | chr7.1:3163731-3163750 | MS.gene23107:CDS | 60.0% | |
| TAGGTAACTCCTGGGTCCCC+TGG | - | chr7.1:3165526-3165545 | MS.gene23107:intron | 60.0% | |
| ! | GCCCGTGGAAAGCATGAAGG+AGG | - | chr7.1:3165600-3165619 | MS.gene23107:CDS | 60.0% |
| CGGAACCCAGCACGATCACC+AGG | + | chr7.1:3165547-3165566 | None:intergenic | 65.0% | |
| CTAGGCTTCGTCCCGGGGAT+TGG | - | chr7.1:3163730-3163749 | MS.gene23107:CDS | 65.0% | |
| GATCGTGCTGGGTTCCGTCC+TGG | - | chr7.1:3165550-3165569 | MS.gene23107:intron | 65.0% | |
| GGTCCCCTGGTGATCGTGCT+GGG | - | chr7.1:3165539-3165558 | MS.gene23107:intron | 65.0% | |
| GCACGATCACCAGGGGACCC+AGG | + | chr7.1:3165538-3165557 | None:intergenic | 70.0% | |
| GGGTCCCCTGGTGATCGTGC+TGG | - | chr7.1:3165538-3165557 | MS.gene23107:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3161469 | 3166072 | 3161469 | ID=MS.gene23107 |
| chr7.1 | mRNA | 3161469 | 3166072 | 3161469 | ID=MS.gene23107.t1;Parent=MS.gene23107 |
| chr7.1 | exon | 3165973 | 3166072 | 3165973 | ID=MS.gene23107.t1.exon1;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3165973 | 3166072 | 3165973 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3165600 | 3165710 | 3165600 | ID=MS.gene23107.t1.exon2;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3165600 | 3165710 | 3165600 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3165318 | 3165497 | 3165318 | ID=MS.gene23107.t1.exon3;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3165318 | 3165497 | 3165318 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3165103 | 3165230 | 3165103 | ID=MS.gene23107.t1.exon4;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3165103 | 3165230 | 3165103 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3163730 | 3163941 | 3163730 | ID=MS.gene23107.t1.exon5;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3163730 | 3163941 | 3163730 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3163487 | 3163568 | 3163487 | ID=MS.gene23107.t1.exon6;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3163487 | 3163568 | 3163487 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3163233 | 3163375 | 3163233 | ID=MS.gene23107.t1.exon7;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3163233 | 3163375 | 3163233 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3162823 | 3162943 | 3162823 | ID=MS.gene23107.t1.exon8;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3162823 | 3162943 | 3162823 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3161920 | 3162012 | 3161920 | ID=MS.gene23107.t1.exon9;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3161920 | 3162012 | 3161920 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| chr7.1 | exon | 3161469 | 3161585 | 3161469 | ID=MS.gene23107.t1.exon10;Parent=MS.gene23107.t1 |
| chr7.1 | CDS | 3161469 | 3161585 | 3161469 | ID=cds.MS.gene23107.t1;Parent=MS.gene23107.t1 |
| Gene Sequence |
| Protein sequence |
