Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050896.t1 | XP_003626259.1 | 97 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 2.80E-234 | 820.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050896.t1 | Q3E6S8 | 61.9 | 425 | 143 | 6 | 8 | 425 | 14 | 426 | 1.2e-140 | 501.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050896.t1 | A2Q336 | 97.0 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 2.1e-234 | 820.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050896 | MS.gene23107 | 0.984999 | 3.20E-162 | -1.69E-46 |
| MS.gene050896 | MS.gene78603 | 0.900946 | 4.40E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050896 | MS.gene021049 | PPI |
| MS.gene050896 | MS.gene67376 | PPI |
| MS.gene050896 | MS.gene004101 | PPI |
| MS.gene050896 | MS.gene036453 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050896.t1 | MTR_7g113170 | 96.963 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 0.0 | 838 |
| MS.gene050896.t1 | MTR_7g113170 | 96.936 | 359 | 11 | 0 | 1 | 359 | 6 | 364 | 0.0 | 705 |
| MS.gene050896.t1 | MTR_6g007030 | 30.293 | 307 | 170 | 10 | 123 | 408 | 128 | 411 | 5.44e-32 | 126 |
| MS.gene050896.t1 | MTR_6g011810 | 28.571 | 308 | 182 | 10 | 142 | 425 | 165 | 458 | 2.90e-30 | 122 |
| MS.gene050896.t1 | MTR_2g019140 | 35.519 | 183 | 108 | 5 | 142 | 315 | 133 | 314 | 2.58e-22 | 97.4 |
| MS.gene050896.t1 | MTR_5g464730 | 29.740 | 269 | 145 | 7 | 173 | 411 | 93 | 347 | 1.40e-20 | 93.2 |
| MS.gene050896.t1 | MTR_5g064160 | 27.143 | 280 | 159 | 7 | 162 | 410 | 137 | 402 | 2.49e-19 | 90.1 |
| MS.gene050896.t1 | MTR_5g064160 | 27.046 | 281 | 160 | 7 | 162 | 411 | 102 | 368 | 2.55e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050896.t1 | AT5G27660 | 62.824 | 425 | 145 | 5 | 8 | 425 | 14 | 432 | 0.0 | 525 |
| MS.gene050896.t1 | AT5G27660 | 61.882 | 425 | 143 | 6 | 8 | 425 | 9 | 421 | 1.12e-180 | 510 |
| MS.gene050896.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 123 | 424 | 135 | 439 | 1.34e-33 | 131 |
| MS.gene050896.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 123 | 424 | 135 | 439 | 1.34e-33 | 131 |
| MS.gene050896.t1 | AT5G39830 | 29.545 | 308 | 179 | 10 | 142 | 425 | 155 | 448 | 2.52e-31 | 125 |
| MS.gene050896.t1 | AT5G39830 | 28.525 | 305 | 172 | 10 | 142 | 425 | 155 | 434 | 7.82e-27 | 112 |
| MS.gene050896.t1 | AT4G18370 | 36.458 | 192 | 110 | 6 | 142 | 323 | 131 | 320 | 1.85e-21 | 95.1 |
Find 127 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTCCCTAATGTCAATA+AGG | 0.269170 | 7.1:-3148637 | MS.gene050896:CDS |
| TGTATGGCACAGGGAAATTC+TGG | 0.299439 | 7.1:-3149162 | MS.gene050896:intron |
| TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | 7.1:-3151235 | MS.gene050896:CDS |
| ATTGGCTTTGTAGATTTCTA+TGG | 0.309418 | 7.1:-3151018 | MS.gene050896:intron |
| TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | 7.1:-3149142 | MS.gene050896:CDS |
| CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | 7.1:-3149586 | MS.gene050896:CDS |
| TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | 7.1:-3149337 | MS.gene050896:CDS |
| TGCGACTTTAACTGTGATTC+CGG | 0.336668 | 7.1:-3147289 | MS.gene050896:CDS |
| AGAATGCCCTTATTGACATT+AGG | 0.346180 | 7.1:+3148630 | None:intergenic |
| GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | 7.1:-3147778 | MS.gene050896:CDS |
| GAATGCCCTTATTGACATTA+GGG | 0.359755 | 7.1:+3148631 | None:intergenic |
| AAGCCATCTAAGGATACTTT+TGG | 0.364970 | 7.1:-3151183 | MS.gene050896:CDS |
| GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | 7.1:-3149336 | MS.gene050896:CDS |
| GACATGTCTAAGGAAACTTC+TGG | 0.371904 | 7.1:-3151225 | MS.gene050896:CDS |
| ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | 7.1:+3149299 | None:intergenic |
| TGATGAATCAAAGCCATCTA+AGG | 0.379781 | 7.1:-3151193 | MS.gene050896:CDS |
| AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | 7.1:-3149327 | MS.gene050896:CDS |
| GATGTTGTCATTGAATTTGA+TGG | 0.389841 | 7.1:-3147742 | MS.gene050896:CDS |
| AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | 7.1:-3151247 | MS.gene050896:CDS |
| TTGAACACAAACCTTCCCTT+TGG | 0.396372 | 7.1:+3150888 | None:intergenic |
| AAATGATGGTGGACAAAGTT+GGG | 0.397529 | 7.1:-3147353 | MS.gene050896:CDS |
| TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | 7.1:-3149585 | MS.gene050896:CDS |
| CAAAGCTTGGTTCTTCAACT+AGG | 0.415056 | 7.1:-3149604 | MS.gene050896:CDS |
| CCAAGCTTTGCTTCCGGAAG+TGG | 0.420101 | 7.1:+3149617 | None:intergenic |
| AAATTCTGAAACCCCACTTC+CGG | 0.423531 | 7.1:-3149630 | MS.gene050896:CDS |
| CAAGATGGAAGGACATTTGA+GGG | 0.423591 | 7.1:-3149701 | MS.gene050896:CDS |
| CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | 7.1:-3149592 | MS.gene050896:CDS |
| CGGAACCCAGCACGATCACC+AGG | 0.431496 | 7.1:+3147772 | None:intergenic |
| TGCCATTGCAAGATATATCA+TGG | 0.437451 | 7.1:-3151461 | MS.gene050896:CDS |
| CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | 7.1:+3151180 | None:intergenic |
| TCATTCCCTAATGTCAATAA+GGG | 0.444524 | 7.1:-3148636 | MS.gene050896:CDS |
| GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | 7.1:-3147265 | None:intergenic |
| AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | 7.1:+3147260 | None:intergenic |
| GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | 7.1:-3147777 | MS.gene050896:CDS |
| ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | 7.1:+3151771 | None:intergenic |
| ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | 7.1:-3151224 | MS.gene050896:CDS |
| GAAGAACCAAGCTTTGCTTC+CGG | 0.472595 | 7.1:+3149611 | None:intergenic |
| GTGGACGTAACAAATCAAAC+GGG | 0.472824 | 7.1:+3151424 | None:intergenic |
| TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | 7.1:-3150994 | MS.gene050896:CDS |
| GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | 7.1:-3147367 | MS.gene050896:intron |
| TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | 7.1:-3147790 | MS.gene050896:CDS |
| AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | 7.1:-3149088 | MS.gene050896:CDS |
| TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | 7.1:+3151234 | None:intergenic |
| ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | 7.1:-3149030 | MS.gene050896:CDS |
| TGTGGACGTAACAAATCAAA+CGG | 0.478244 | 7.1:+3151423 | None:intergenic |
| GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | 7.1:-3149087 | MS.gene050896:CDS |
| GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | 7.1:+3151240 | None:intergenic |
| TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | 7.1:+3147714 | None:intergenic |
| CAAGCTTTGCTTCCGGAAGT+GGG | 0.491393 | 7.1:+3149618 | None:intergenic |
| AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | 7.1:-3151826 | MS.gene050896:CDS |
| GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | 7.1:-3147766 | MS.gene050896:CDS |
| GCAAGATGGAAGGACATTTG+AGG | 0.500220 | 7.1:-3149702 | MS.gene050896:CDS |
| ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | 7.1:-3149716 | MS.gene050896:CDS |
| CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | 7.1:-3149573 | MS.gene050896:CDS |
| ATCGAAATATTAACAACAGC+AGG | 0.506520 | 7.1:+3151123 | None:intergenic |
| CCACTTCCGGAAGCAAAGCT+TGG | 0.510741 | 7.1:-3149617 | MS.gene050896:CDS |
| AAGGACATTTGAGGGGAAAG+TGG | 0.512120 | 7.1:-3149693 | MS.gene050896:CDS |
| AGAGTGATACGGCCATGGCT+TGG | 0.514213 | 7.1:-3148717 | MS.gene050896:CDS |
| GGAACAATCATTAACAAAGA+TGG | 0.515974 | 7.1:-3150967 | MS.gene050896:CDS |
| ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | 7.1:-3149093 | MS.gene050896:CDS |
| TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | 7.1:-3149591 | MS.gene050896:CDS |
| AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | 7.1:-3151827 | MS.gene050896:CDS |
| GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | 7.1:-3151147 | MS.gene050896:CDS |
| GAAATGATGGTGGACAAAGT+TGG | 0.526009 | 7.1:-3147354 | MS.gene050896:CDS |
| ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | 7.1:+3147715 | None:intergenic |
| GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | 7.1:-3150903 | MS.gene050896:CDS |
| CATGAAAATCAACGACAACA+TGG | 0.539853 | 7.1:+3150926 | None:intergenic |
| TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | 7.1:-3149593 | MS.gene050896:CDS |
| TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | 7.1:-3148722 | MS.gene050896:intron |
| ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | 7.1:-3150988 | MS.gene050896:CDS |
| CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | 7.1:-3149526 | MS.gene050896:intron |
| CATGGCTATTACCCAATCCC+CGG | 0.547015 | 7.1:+3149574 | None:intergenic |
| AAGGGAATGCGGACAACCCA+TGG | 0.551296 | 7.1:+3149556 | None:intergenic |
| GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | 7.1:-3150904 | MS.gene050896:CDS |
| TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | 7.1:-3148619 | MS.gene050896:intron |
| TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | 7.1:-3151835 | MS.gene050896:CDS |
| GGGCCACTTGTCAATATGGA+TGG | 0.558327 | 7.1:-3149138 | MS.gene050896:CDS |
| CTTCAGAATACTGTCACTGC+TGG | 0.562372 | 7.1:-3149536 | MS.gene050896:CDS |
| TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | 7.1:-3149029 | MS.gene050896:intron |
| ACACACAGAGTCGATTGGTA+CGG | 0.565045 | 7.1:+3149059 | None:intergenic |
| AGATATATCATGGTTGACAT+TGG | 0.565755 | 7.1:-3151451 | MS.gene050896:CDS |
| AACCATGATATATCTTGCAA+TGG | 0.566757 | 7.1:+3151459 | None:intergenic |
| GATATATCTTGCAATGGCAA+AGG | 0.570631 | 7.1:+3151465 | None:intergenic |
| CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | 7.1:+3149537 | None:intergenic |
| TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | 7.1:-3151491 | MS.gene050896:CDS |
| AATATGGATGGAGAAATTGT+TGG | 0.576439 | 7.1:-3149126 | MS.gene050896:CDS |
| TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | 7.1:+3149300 | None:intergenic |
| AACGATACCCACAGCTCCAA+CGG | 0.578717 | 7.1:+3151819 | None:intergenic |
| GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | 7.1:-3151811 | MS.gene050896:CDS |
| AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | 7.1:+3147270 | None:intergenic |
| AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | 7.1:-3149712 | MS.gene050896:CDS |
| GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | 7.1:-3149572 | MS.gene050896:CDS |
| ATGAAAATCAACGACAACAT+GGG | 0.587711 | 7.1:+3150927 | None:intergenic |
| AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | 7.1:-3150899 | MS.gene050896:intron |
| ATGGCTATTACCCAATCCCC+GGG | 0.595774 | 7.1:+3149575 | None:intergenic |
| TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | 7.1:-3149092 | MS.gene050896:CDS |
| GAACCCAGCACGATCACCAG+GGG | 0.600193 | 7.1:+3147774 | None:intergenic |
| GCACGATCACCAGGGGACCC+AGG | 0.601429 | 7.1:+3147781 | None:intergenic |
| ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | 7.1:+3151764 | None:intergenic |
| TCTCCATCCATATTGACAAG+TGG | 0.603386 | 7.1:+3149135 | None:intergenic |
| CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | 7.1:-3147340 | MS.gene050896:CDS |
| AACAGATTGTGCAATTAATG+TGG | 0.605597 | 7.1:-3149283 | MS.gene050896:intron |
| CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | 7.1:-3151223 | MS.gene050896:CDS |
| TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | 7.1:-3147731 | MS.gene050896:CDS |
| TGGTCGAAAGACGACAAATG+TGG | 0.613228 | 7.1:+3151405 | None:intergenic |
| AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | 7.1:-3147719 | MS.gene050896:CDS |
| AAGCTTTGCTTCCGGAAGTG+GGG | 0.621714 | 7.1:+3149619 | None:intergenic |
| TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | 7.1:-3151399 | MS.gene050896:intron |
| AATTCAATGACAACATCACC+AGG | 0.627515 | 7.1:+3147748 | None:intergenic |
| AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | 7.1:+3148705 | None:intergenic |
| AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | 7.1:+3149538 | None:intergenic |
| GTTAATATTTCGATTCCACA+AGG | 0.645580 | 7.1:-3151114 | MS.gene050896:intron |
| AGAAAGAGGACAAACCATGT+TGG | 0.646314 | 7.1:+3151385 | None:intergenic |
| GGAACCCAGCACGATCACCA+GGG | 0.647337 | 7.1:+3147773 | None:intergenic |
| GACTTTAACTGTGATTCCGG+AGG | 0.651382 | 7.1:-3147286 | MS.gene050896:CDS |
| ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | 7.1:+3149545 | None:intergenic |
| ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | 7.1:-3149159 | MS.gene050896:intron |
| CAATGACAACATCACCAGGA+CGG | 0.663393 | 7.1:+3147752 | None:intergenic |
| GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | 7.1:-3147716 | MS.gene050896:intron |
| GCAGGTTATTGAAATGATGG+TGG | 0.673889 | 7.1:-3147364 | MS.gene050896:intron |
| AGTGAACATCATGAAAGTGT+TGG | 0.676552 | 7.1:-3149103 | MS.gene050896:CDS |
| ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | 7.1:+3151241 | None:intergenic |
| TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | 7.1:-3149158 | MS.gene050896:intron |
| AAGATGGAAGGACATTTGAG+GGG | 0.693003 | 7.1:-3149700 | MS.gene050896:CDS |
| AATGATGGTGGACAAAGTTG+GGG | 0.709009 | 7.1:-3147352 | MS.gene050896:CDS |
| ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | 7.1:-3151222 | MS.gene050896:CDS |
| TGGACGTAACAAATCAAACG+GGG | 0.745894 | 7.1:+3151425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAGTAAAAGAAAAT+AGG | + | chr7.1:3149663-3149682 | None:intergenic | 10.0% |
| !!! | TTTTTTTATAACAATAACAA+CGG | - | chr7.1:3151063-3151082 | MS.gene050896:intron | 10.0% |
| !! | AAGATAAAATAAAATGATCT+GGG | - | chr7.1:3151490-3151509 | MS.gene050896:CDS | 15.0% |
| !! | TAAGATAAAATAAAATGATC+TGG | - | chr7.1:3151489-3151508 | MS.gene050896:CDS | 15.0% |
| !! | TAATCTTGAAATAAAGTTAA+TGG | - | chr7.1:3147401-3147420 | MS.gene050896:intron | 15.0% |
| !!! | TATTTTCAGAATAATTTTCT+AGG | + | chr7.1:3150832-3150851 | None:intergenic | 15.0% |
| !! | AAAATTACACAAAACATAAG+CGG | + | chr7.1:3151143-3151162 | None:intergenic | 20.0% |
| !! | AAGAAATATATCTTGAATTG+TGG | + | chr7.1:3148775-3148794 | None:intergenic | 20.0% |
| !! | AATAATCAATTCATCTAACA+TGG | - | chr7.1:3147593-3147612 | MS.gene050896:intron | 20.0% |
| !! | AGATAAAATAAAATGATCTG+GGG | - | chr7.1:3151491-3151510 | MS.gene050896:CDS | 20.0% |
| !! | CAAACTTATACTAATCTTTA+GGG | - | chr7.1:3151559-3151578 | MS.gene050896:intron | 20.0% |
| !! | GATCATAATATATCCATAAA+AGG | + | chr7.1:3150276-3150295 | None:intergenic | 20.0% |
| !! | TATTGATATTCTTATGTTGT+AGG | - | chr7.1:3149156-3149175 | MS.gene050896:intron | 20.0% |
| !! | TGTTAAATCTAACATTGAAA+TGG | + | chr7.1:3149689-3149708 | None:intergenic | 20.0% |
| !!! | AAATTTAAACGTTTTTGACT+AGG | - | chr7.1:3151307-3151326 | MS.gene050896:intron | 20.0% |
| !!! | AGTAAACTTTTTTTCTTTTC+AGG | - | chr7.1:3150376-3150395 | MS.gene050896:intron | 20.0% |
| !!! | ATTTAGAACTGAAAATTTGT+AGG | - | chr7.1:3147822-3147841 | MS.gene050896:intron | 20.0% |
| !!! | CTGATTTTTTAAATGTCTTT+TGG | - | chr7.1:3149713-3149732 | MS.gene050896:CDS | 20.0% |
| !!! | TTCATGTATTGTATGATTTT+TGG | - | chr7.1:3149745-3149764 | MS.gene050896:intron | 20.0% |
| !!! | TTTAGAACTGAAAATTTGTA+GGG | - | chr7.1:3147823-3147842 | MS.gene050896:intron | 20.0% |
| ! | AAAGAAAATAGGTTAAAACC+AGG | + | chr7.1:3149652-3149671 | None:intergenic | 25.0% |
| ! | AATTCAATTGTTAGAGTGAT+AGG | + | chr7.1:3148893-3148912 | None:intergenic | 25.0% |
| ! | AGGATGTTAAGAAAGATAAA+GGG | + | chr7.1:3148991-3149010 | None:intergenic | 25.0% |
| ! | ATATCAATAACCAATTGTTC+TGG | + | chr7.1:3149145-3149164 | None:intergenic | 25.0% |
| ! | ATTACAAATCAAAGAGAAGA+TGG | - | chr7.1:3150951-3150970 | MS.gene050896:CDS | 25.0% |
| ! | CATAATGAAGAATAATCTCA+CGG | + | chr7.1:3151683-3151702 | None:intergenic | 25.0% |
| ! | CATCTAAAGATCGATTAATT+GGG | + | chr7.1:3150529-3150548 | None:intergenic | 25.0% |
| ! | CCAAACTTATACTAATCTTT+AGG | - | chr7.1:3151558-3151577 | MS.gene050896:intron | 25.0% |
| ! | CCTAAAGATTAGTATAAGTT+TGG | + | chr7.1:3151561-3151580 | None:intergenic | 25.0% |
| ! | GTCAATCAAAATTGTTTATG+CGG | + | chr7.1:3150298-3150317 | None:intergenic | 25.0% |
| ! | TATTAAAAGTGAATGTGGAA+AGG | + | chr7.1:3148925-3148944 | None:intergenic | 25.0% |
| ! | TGGTATATACTAACTAGTTA+TGG | + | chr7.1:3148755-3148774 | None:intergenic | 25.0% |
| ! | TTCAGATTGTCACATATAAA+CGG | + | chr7.1:3150197-3150216 | None:intergenic | 25.0% |
| ! | TTTGATCTATCAATAAGATG+AGG | + | chr7.1:3150857-3150876 | None:intergenic | 25.0% |
| !! | ATACTTGTTACTATCATACT+TGG | - | chr7.1:3150774-3150793 | MS.gene050896:intron | 25.0% |
| !! | CTTACAATTTTCACCTTTTA+TGG | - | chr7.1:3150260-3150279 | MS.gene050896:intron | 25.0% |
| !! | TTGAGTCTTAAATGATTTTC+AGG | + | chr7.1:3149265-3149284 | None:intergenic | 25.0% |
| !! | TTGATTGACATACTTTTATG+TGG | - | chr7.1:3150309-3150328 | MS.gene050896:intron | 25.0% |
| !!! | CCACATTCACTTTTAATAAT+GGG | - | chr7.1:3148927-3148946 | MS.gene050896:intron | 25.0% |
| !!! | TCCACATTCACTTTTAATAA+TGG | - | chr7.1:3148926-3148945 | MS.gene050896:intron | 25.0% |
| AACAGATTGTGCAATTAATG+TGG | - | chr7.1:3149833-3149852 | MS.gene050896:intron | 30.0% | |
| AACCATGATATATCTTGCAA+TGG | + | chr7.1:3147660-3147679 | None:intergenic | 30.0% | |
| AACGATTCATTCAGATGAAA+AGG | + | chr7.1:3148036-3148055 | None:intergenic | 30.0% | |
| AAGTGAACACAAAAACAAAG+AGG | - | chr7.1:3150875-3150894 | MS.gene050896:intron | 30.0% | |
| AATATGGATGGAGAAATTGT+TGG | - | chr7.1:3149990-3150009 | MS.gene050896:intron | 30.0% | |
| AATATTGACGATGCATACAA+AGG | - | chr7.1:3147557-3147576 | MS.gene050896:intron | 30.0% | |
| AATGTTGTCTAATCAGAAAG+AGG | + | chr7.1:3151099-3151118 | None:intergenic | 30.0% | |
| ACTTGTAATGAGCTTATGTA+TGG | + | chr7.1:3149046-3149065 | None:intergenic | 30.0% | |
| AGATATATCATGGTTGACAT+TGG | - | chr7.1:3147665-3147684 | MS.gene050896:intron | 30.0% | |
| AGATTTAGTTAATTGCTCAC+TGG | + | chr7.1:3147366-3147385 | None:intergenic | 30.0% | |
| ATAAACTACCCAAGTAGATA+TGG | - | chr7.1:3149882-3149901 | MS.gene050896:intron | 30.0% | |
| ATATAACTGTAGCTTGATAC+TGG | + | chr7.1:3148404-3148423 | None:intergenic | 30.0% | |
| ATATTGAGAACCAATTGATC+CGG | + | chr7.1:3149203-3149222 | None:intergenic | 30.0% | |
| ATCCATATTCCATATCTACT+TGG | + | chr7.1:3149894-3149913 | None:intergenic | 30.0% | |
| ATCGAAATATTAACAACAGC+AGG | + | chr7.1:3147996-3148015 | None:intergenic | 30.0% | |
| ATCTGTTTGTAAATACTCTC+TGG | + | chr7.1:3149820-3149839 | None:intergenic | 30.0% | |
| ATGAAAATCAACGACAACAT+GGG | + | chr7.1:3148192-3148211 | None:intergenic | 30.0% | |
| ATGATAGTTTATCATGCTGT+AGG | - | chr7.1:3149070-3149089 | MS.gene050896:CDS | 30.0% | |
| ATTAATTGGGAACATACCAT+TGG | + | chr7.1:3150516-3150535 | None:intergenic | 30.0% | |
| CAAGATTAGAGAGAAAATTG+TGG | + | chr7.1:3148958-3148977 | None:intergenic | 30.0% | |
| CATAGATGTAAAATTGTTGC+AGG | - | chr7.1:3151734-3151753 | MS.gene050896:intron | 30.0% | |
| CCCATTATTAAAAGTGAATG+TGG | + | chr7.1:3148930-3148949 | None:intergenic | 30.0% | |
| CGTAACTATCACAATTAGAA+TGG | + | chr7.1:3151029-3151048 | None:intergenic | 30.0% | |
| CTACATGAGTTAGAATAAGA+CGG | - | chr7.1:3148727-3148746 | MS.gene050896:intron | 30.0% | |
| CTAGGATTCTCACTTTAATA+GGG | + | chr7.1:3150814-3150833 | None:intergenic | 30.0% | |
| CTTGTAATGAGCTTATGTAT+GGG | + | chr7.1:3149045-3149064 | None:intergenic | 30.0% | |
| GAAAGAAAGTTCAACTGTTA+GGG | + | chr7.1:3148852-3148871 | None:intergenic | 30.0% | |
| GAAATAATGTGTTTGTCACA+AGG | - | chr7.1:3151284-3151303 | MS.gene050896:intron | 30.0% | |
| GAGGATGTTAAGAAAGATAA+AGG | + | chr7.1:3148992-3149011 | None:intergenic | 30.0% | |
| GATGTATTTGTGCAAAACTA+AGG | + | chr7.1:3148660-3148679 | None:intergenic | 30.0% | |
| GATGTTGTCATTGAATTTGA+TGG | - | chr7.1:3151374-3151393 | MS.gene050896:intron | 30.0% | |
| GCATCTAAAGATCGATTAAT+TGG | + | chr7.1:3150530-3150549 | None:intergenic | 30.0% | |
| GGAACAATCATTAACAAAGA+TGG | - | chr7.1:3148149-3148168 | MS.gene050896:intron | 30.0% | |
| GTAGATATGGAATATGGATT+TGG | - | chr7.1:3149895-3149914 | MS.gene050896:intron | 30.0% | |
| GTTAATATTTCGATTCCACA+AGG | - | chr7.1:3148002-3148021 | MS.gene050896:intron | 30.0% | |
| GTTACTATCATACTTGGATA+GGG | - | chr7.1:3150780-3150799 | MS.gene050896:intron | 30.0% | |
| TAAAAGTTCAAACCAGAAAG+AGG | + | chr7.1:3147748-3147767 | None:intergenic | 30.0% | |
| TCATTCCCTAATGTCAATAA+GGG | - | chr7.1:3150480-3150499 | MS.gene050896:intron | 30.0% | |
| TCCAAGCAGAAAGTTTAATT+AGG | - | chr7.1:3150231-3150250 | MS.gene050896:intron | 30.0% | |
| TCCATATTCCATATCTACTT+GGG | + | chr7.1:3149893-3149912 | None:intergenic | 30.0% | |
| TCTAACATGGCTTCAAATTT+AGG | - | chr7.1:3147606-3147625 | MS.gene050896:intron | 30.0% | |
| TCTGTTTGTAAATACTCTCT+GGG | + | chr7.1:3149819-3149838 | None:intergenic | 30.0% | |
| TGAAAGAAAGTTCAACTGTT+AGG | + | chr7.1:3148853-3148872 | None:intergenic | 30.0% | |
| TGGTTAATACTTGAGTAGTT+AGG | - | chr7.1:3150329-3150348 | MS.gene050896:intron | 30.0% | |
| TGTTACTATCATACTTGGAT+AGG | - | chr7.1:3150779-3150798 | MS.gene050896:intron | 30.0% | |
| TTCAAAGTTGTTTGCAAAGT+TGG | - | chr7.1:3150632-3150651 | MS.gene050896:intron | 30.0% | |
| TTCAAGACAGTGTACATATT+TGG | + | chr7.1:3148270-3148289 | None:intergenic | 30.0% | |
| TTCATTCCCTAATGTCAATA+AGG | - | chr7.1:3150479-3150498 | MS.gene050896:intron | 30.0% | |
| ! | ATAGAGCATTTCAAGAAAAG+TGG | - | chr7.1:3150086-3150105 | MS.gene050896:intron | 30.0% |
| ! | TAGAGCATTTCAAGAAAAGT+GGG | - | chr7.1:3150087-3150106 | MS.gene050896:intron | 30.0% |
| ! | TATTATGATAGTGAAGCCAT+GGG | - | chr7.1:3150735-3150754 | MS.gene050896:intron | 30.0% |
| ! | TCTAGGATTCTCACTTTAAT+AGG | + | chr7.1:3150815-3150834 | None:intergenic | 30.0% |
| ! | TTAATGGCATGCTTTTCAAT+TGG | - | chr7.1:3147417-3147436 | MS.gene050896:intron | 30.0% |
| ! | TTATTATGATAGTGAAGCCA+TGG | - | chr7.1:3150734-3150753 | MS.gene050896:intron | 30.0% |
| ! | TTTTCAGAATCTAGATTCAC+AGG | - | chr7.1:3150562-3150581 | MS.gene050896:intron | 30.0% |
| !! | ATTGGCTTTGTAGATTTCTA+TGG | - | chr7.1:3148098-3148117 | MS.gene050896:intron | 30.0% |
| !! | ATTTCTATGGTTTTGCTACA+GGG | - | chr7.1:3148111-3148130 | MS.gene050896:intron | 30.0% |
| !! | CTTTTAACTACAACCTTCAT+GGG | + | chr7.1:3151792-3151811 | None:intergenic | 30.0% |
| !! | TCTTTTAACTACAACCTTCA+TGG | + | chr7.1:3151793-3151812 | None:intergenic | 30.0% |
| !!! | TCGATTTTTTTTACTGTCTG+TGG | + | chr7.1:3151660-3151679 | None:intergenic | 30.0% |
| AAAAGTGAATGTGGAAAGGA+AGG | + | chr7.1:3148921-3148940 | None:intergenic | 35.0% | |
| AAGAAAAGTGGGTATGTTTC+TGG | - | chr7.1:3150098-3150117 | MS.gene050896:intron | 35.0% | |
| AATTCAATGACAACATCACC+AGG | + | chr7.1:3151371-3151390 | None:intergenic | 35.0% | |
| ACATGTCTAAGGAAACTTCT+GGG | - | chr7.1:3147892-3147911 | MS.gene050896:intron | 35.0% | |
| ACCCAAGTAGATATGGAATA+TGG | - | chr7.1:3149889-3149908 | MS.gene050896:intron | 35.0% | |
| ACTGGAATTAGTGTGGTTAT+CGG | + | chr7.1:3147348-3147367 | None:intergenic | 35.0% | |
| ACTGTAACAACCAAACCTTT+AGG | - | chr7.1:3148695-3148714 | MS.gene050896:CDS | 35.0% | |
| AGAATGCCCTTATTGACATT+AGG | + | chr7.1:3150489-3150508 | None:intergenic | 35.0% | |
| AGTTCAACTGTTAGGGTAAA+AGG | + | chr7.1:3148845-3148864 | None:intergenic | 35.0% | |
| AGTTCTCTGTGATGTAAATG+TGG | - | chr7.1:3148321-3148340 | MS.gene050896:intron | 35.0% | |
| ATAGTAGCTCATTTAGCTGT+AGG | - | chr7.1:3149099-3149118 | MS.gene050896:CDS | 35.0% | |
| ATCTACTTGGGTAGTTTATG+CGG | + | chr7.1:3149881-3149900 | None:intergenic | 35.0% | |
| CACATACATCTAAACATGCA+TGG | + | chr7.1:3147798-3147817 | None:intergenic | 35.0% | |
| CATGAAAATCAACGACAACA+TGG | + | chr7.1:3148193-3148212 | None:intergenic | 35.0% | |
| CTAATCAGAAAGAGGAGTAA+GGG | + | chr7.1:3151091-3151110 | None:intergenic | 35.0% | |
| CTTTGTATGACTCAAAGCTA+GGG | - | chr7.1:3148480-3148499 | MS.gene050896:intron | 35.0% | |
| GAAAAGGTAGAAAAACCTTG+TGG | + | chr7.1:3148020-3148039 | None:intergenic | 35.0% | |
| GAAGGTTTGTGTTCAAGAAA+GGG | - | chr7.1:3148235-3148254 | MS.gene050896:intron | 35.0% | |
| GAATGCCCTTATTGACATTA+GGG | + | chr7.1:3150488-3150507 | None:intergenic | 35.0% | |
| GAGCAACACAATGCATATTA+TGG | + | chr7.1:3151237-3151256 | None:intergenic | 35.0% | |
| GATATATCTTGCAATGGCAA+AGG | + | chr7.1:3147654-3147673 | None:intergenic | 35.0% | |
| GATCCATTCCCAACAAAATA+GGG | - | chr7.1:3148561-3148580 | MS.gene050896:intron | 35.0% | |
| GCCTAATTAAACTTTCTGCT+TGG | + | chr7.1:3150235-3150254 | None:intergenic | 35.0% | |
| GCTAAATGAGCTACTATACA+AGG | + | chr7.1:3149096-3149115 | None:intergenic | 35.0% | |
| GTACTTTCTGAGTCATGATT+TGG | - | chr7.1:3148529-3148548 | MS.gene050896:intron | 35.0% | |
| GTTGCAGGTTATTGAAATGA+TGG | - | chr7.1:3151749-3151768 | MS.gene050896:intron | 35.0% | |
| TAATCAGAAAGAGGAGTAAG+GGG | + | chr7.1:3151090-3151109 | None:intergenic | 35.0% | |
| TACACAAAACATAAGCGGAA+TGG | + | chr7.1:3151138-3151157 | None:intergenic | 35.0% | |
| TCTAATCAGAAAGAGGAGTA+AGG | + | chr7.1:3151092-3151111 | None:intergenic | 35.0% | |
| TGATCCATTCCCAACAAAAT+AGG | - | chr7.1:3148560-3148579 | MS.gene050896:intron | 35.0% | |
| TGATGAATCAAAGCCATCTA+AGG | - | chr7.1:3147923-3147942 | MS.gene050896:intron | 35.0% | |
| TGCCATTGCAAGATATATCA+TGG | - | chr7.1:3147655-3147674 | MS.gene050896:intron | 35.0% | |
| TGTGGACGTAACAAATCAAA+CGG | + | chr7.1:3147696-3147715 | None:intergenic | 35.0% | |
| TTGAGATTATGCTGATGGTT+TGG | - | chr7.1:3148072-3148091 | MS.gene050896:intron | 35.0% | |
| TTGCATGTTATCTGCTTGTA+TGG | - | chr7.1:3149938-3149957 | MS.gene050896:intron | 35.0% | |
| ! | AAGCAATGCCCTATTTTGTT+GGG | + | chr7.1:3148572-3148591 | None:intergenic | 35.0% |
| ! | AAGCCATCTAAGGATACTTT+TGG | - | chr7.1:3147933-3147952 | MS.gene050896:intron | 35.0% |
| ! | AGTGAACATCATGAAAGTGT+TGG | - | chr7.1:3150013-3150032 | MS.gene050896:intron | 35.0% |
| ! | ATGCAAACGAAACATGCTTT+TGG | + | chr7.1:3148371-3148390 | None:intergenic | 35.0% |
| ! | ATGTGGTAGAAGAGTACAAT+TGG | - | chr7.1:3148338-3148357 | MS.gene050896:intron | 35.0% |
| ! | ATTGAAGTCACTTTGCAAGA+TGG | - | chr7.1:3149400-3149419 | MS.gene050896:intron | 35.0% |
| ! | ATTTTACACACAGAGTCGAT+TGG | + | chr7.1:3150065-3150084 | None:intergenic | 35.0% |
| ! | TAAGCAATGCCCTATTTTGT+TGG | + | chr7.1:3148573-3148592 | None:intergenic | 35.0% |
| ! | TCGTTTTCATTCAGTTCTGT+AGG | + | chr7.1:3148615-3148634 | None:intergenic | 35.0% |
| ! | TGCAAACGAAACATGCTTTT+GGG | + | chr7.1:3148370-3148389 | None:intergenic | 35.0% |
| !! | AAATGATGGTGGACAAAGTT+GGG | - | chr7.1:3151763-3151782 | MS.gene050896:intron | 35.0% |
| !! | ATCCCAAATCACTGCTTTTA+CGG | + | chr7.1:3149785-3149804 | None:intergenic | 35.0% |
| !! | CTACCAAAAGTATCCTTAGA+TGG | + | chr7.1:3147939-3147958 | None:intergenic | 35.0% |
| !! | GATTTCTATGGTTTTGCTAC+AGG | - | chr7.1:3148110-3148129 | MS.gene050896:intron | 35.0% |
| !! | GTTGATTTTCATGGCACAAA+AGG | - | chr7.1:3148200-3148219 | MS.gene050896:intron | 35.0% |
| !! | TGCTTTCTTTTGCTATGCTT+TGG | - | chr7.1:3150694-3150713 | MS.gene050896:intron | 35.0% |
| !! | TTCTTTTCAGGAGAGTGATA+CGG | - | chr7.1:3150388-3150407 | MS.gene050896:intron | 35.0% |
| !! | TTTTTGACTAGGTAACTCCT+GGG | - | chr7.1:3151318-3151337 | MS.gene050896:intron | 35.0% |
| !!! | CATGTTGTCGTTGATTTTCA+TGG | - | chr7.1:3148191-3148210 | MS.gene050896:intron | 35.0% |
| !!! | CTCTTTTGAGATTATGCTGA+TGG | - | chr7.1:3148067-3148086 | MS.gene050896:intron | 35.0% |
| AAAAGGTTCATCCAAAGGGA+AGG | - | chr7.1:3148217-3148236 | MS.gene050896:intron | 40.0% | |
| AACAACCAAACCTTTAGGTG+AGG | - | chr7.1:3148700-3148719 | MS.gene050896:CDS | 40.0% | |
| AACGACGATTCTGTGAATTC+TGG | - | chr7.1:3148630-3148649 | MS.gene050896:CDS | 40.0% | |
| AAGATGGAAGGACATTTGAG+GGG | - | chr7.1:3149416-3149435 | MS.gene050896:intron | 40.0% | |
| AGAAAGAGGACAAACCATGT+TGG | + | chr7.1:3147734-3147753 | None:intergenic | 40.0% | |
| AGCAGTGACAGTATTCTGAA+GGG | + | chr7.1:3149581-3149600 | None:intergenic | 40.0% | |
| ATCTAAATCCCTGCTAACGT+TGG | - | chr7.1:3148797-3148816 | MS.gene050896:intron | 40.0% | |
| ATGTAGTTGACCTCACCTAA+AGG | + | chr7.1:3148713-3148732 | None:intergenic | 40.0% | |
| ATGTCTAAGGAAACTTCTGG+GGG | - | chr7.1:3147894-3147913 | MS.gene050896:intron | 40.0% | |
| ATTGCTCACTGGAATTAGTG+TGG | + | chr7.1:3147355-3147374 | None:intergenic | 40.0% | |
| CAAGATGGAAGGACATTTGA+GGG | - | chr7.1:3149415-3149434 | MS.gene050896:intron | 40.0% | |
| CACAATGCATATTATGGCAG+AGG | + | chr7.1:3151231-3151250 | None:intergenic | 40.0% | |
| CATGTCTAAGGAAACTTCTG+GGG | - | chr7.1:3147893-3147912 | MS.gene050896:intron | 40.0% | |
| CTGAAAACTCGACAGCAAAA+AGG | + | chr7.1:3149021-3149040 | None:intergenic | 40.0% | |
| GACAGCAAAAAGGCAAAATG+AGG | + | chr7.1:3149011-3149030 | None:intergenic | 40.0% | |
| GACATGTCTAAGGAAACTTC+TGG | - | chr7.1:3147891-3147910 | MS.gene050896:intron | 40.0% | |
| GACCGTAAAAGCAGTGATTT+GGG | - | chr7.1:3149780-3149799 | MS.gene050896:intron | 40.0% | |
| GCACAAAAGGTTCATCCAAA+GGG | - | chr7.1:3148213-3148232 | MS.gene050896:intron | 40.0% | |
| GCAGGTTATTGAAATGATGG+TGG | - | chr7.1:3151752-3151771 | MS.gene050896:intron | 40.0% | |
| GCTTTGTATGACTCAAAGCT+AGG | - | chr7.1:3148479-3148498 | MS.gene050896:intron | 40.0% | |
| GGAAGGTTTGTGTTCAAGAA+AGG | - | chr7.1:3148234-3148253 | MS.gene050896:intron | 40.0% | |
| GGTGCGAAGATAAAACTTTC+TGG | - | chr7.1:3149611-3149630 | MS.gene050896:CDS | 40.0% | |
| GTGGACGTAACAAATCAAAC+GGG | + | chr7.1:3147695-3147714 | None:intergenic | 40.0% | |
| TCTACTTGGGTAGTTTATGC+GGG | + | chr7.1:3149880-3149899 | None:intergenic | 40.0% | |
| TCTCCATCCATATTGACAAG+TGG | + | chr7.1:3149984-3150003 | None:intergenic | 40.0% | |
| TCTGATGTCTTCATTTCACG+AGG | + | chr7.1:3149350-3149369 | None:intergenic | 40.0% | |
| TGACCGTAAAAGCAGTGATT+TGG | - | chr7.1:3149779-3149798 | MS.gene050896:intron | 40.0% | |
| TGCGACTTTAACTGTGATTC+CGG | - | chr7.1:3151827-3151846 | MS.gene050896:CDS | 40.0% | |
| TGGACGTAACAAATCAAACG+GGG | + | chr7.1:3147694-3147713 | None:intergenic | 40.0% | |
| TTATCTGCTTGTATGGCACA+GGG | - | chr7.1:3149945-3149964 | MS.gene050896:intron | 40.0% | |
| TTCACAGGACAGTATCTTCA+TGG | - | chr7.1:3150577-3150596 | MS.gene050896:intron | 40.0% | |
| TTGAACACAAACCTTCCCTT+TGG | + | chr7.1:3148231-3148250 | None:intergenic | 40.0% | |
| TTGTGATAGTTACGTGTAGC+AGG | - | chr7.1:3151035-3151054 | MS.gene050896:intron | 40.0% | |
| ! | AACATGGTTTGTCCTCTTTC+TGG | - | chr7.1:3147733-3147752 | MS.gene050896:CDS | 40.0% |
| ! | AAGTCACTTTGCAAGATGGA+AGG | - | chr7.1:3149404-3149423 | MS.gene050896:intron | 40.0% |
| ! | ACAGTATTCTGAAGGGAATG+CGG | + | chr7.1:3149574-3149593 | None:intergenic | 40.0% |
| ! | AGCAGTGATTTGGGATTTAG+TGG | - | chr7.1:3149789-3149808 | MS.gene050896:intron | 40.0% |
| ! | ATGCCCTATTTTGTTGGGAA+TGG | + | chr7.1:3148567-3148586 | None:intergenic | 40.0% |
| ! | ATGCTGATGGTTTGGAGTAT+TGG | - | chr7.1:3148080-3148099 | MS.gene050896:intron | 40.0% |
| ! | CAAAGCTTGGTTCTTCAACT+AGG | - | chr7.1:3149512-3149531 | MS.gene050896:intron | 40.0% |
| ! | TTTGCTACAGGGAAGAGTAT+TGG | - | chr7.1:3148122-3148141 | MS.gene050896:intron | 40.0% |
| !! | AAATTCTGAAACCCCACTTC+CGG | - | chr7.1:3149486-3149505 | MS.gene050896:intron | 40.0% |
| !! | AATGATGGTGGACAAAGTTG+GGG | - | chr7.1:3151764-3151783 | MS.gene050896:intron | 40.0% |
| !! | GAAATGATGGTGGACAAAGT+TGG | - | chr7.1:3151762-3151781 | MS.gene050896:intron | 40.0% |
| !! | GTTTTTGACTAGGTAACTCC+TGG | - | chr7.1:3151317-3151336 | MS.gene050896:intron | 40.0% |
| !! | TAAGGGCATTCTTGTACCAA+TGG | - | chr7.1:3150497-3150516 | MS.gene050896:intron | 40.0% |
| !! | TTGTATAGTAGCTTGCTTGC+CGG | - | chr7.1:3149181-3149200 | MS.gene050896:intron | 40.0% |
| AAGCTGAGATTGGATTCCTC+CGG | + | chr7.1:3151849-3151868 | None:intergenic | 45.0% | |
| AAGGACATTTGAGGGGAAAG+TGG | - | chr7.1:3149423-3149442 | MS.gene050896:intron | 45.0% | |
| ACACACAGAGTCGATTGGTA+CGG | + | chr7.1:3150060-3150079 | None:intergenic | 45.0% | |
| ACATGTCCGAAGAAGGAACA+GGG | + | chr7.1:3147878-3147897 | None:intergenic | 45.0% | |
| ACTCAAAGTCCAACGTTAGC+AGG | + | chr7.1:3148809-3148828 | None:intergenic | 45.0% | |
| AGCATTCTTAGTCCAAGCCA+TGG | + | chr7.1:3150414-3150433 | None:intergenic | 45.0% | |
| AGGGTGGCTTAAGATCTGAT+GGG | - | chr7.1:3148499-3148518 | MS.gene050896:intron | 45.0% | |
| AGTGAATGTGGAAAGGAAGG+AGG | + | chr7.1:3148918-3148937 | None:intergenic | 45.0% | |
| AGTTAGCCCTGTTCCTTCTT+CGG | - | chr7.1:3147869-3147888 | MS.gene050896:intron | 45.0% | |
| CAATGACAACATCACCAGGA+CGG | + | chr7.1:3151367-3151386 | None:intergenic | 45.0% | |
| CAGCAGTGACAGTATTCTGA+AGG | + | chr7.1:3149582-3149601 | None:intergenic | 45.0% | |
| CTCAAAGTCCAACGTTAGCA+GGG | + | chr7.1:3148808-3148827 | None:intergenic | 45.0% | |
| CTGTCACTGCTGGTATTGTA+AGG | - | chr7.1:3149590-3149609 | MS.gene050896:CDS | 45.0% | |
| CTTCAGAATACTGTCACTGC+TGG | - | chr7.1:3149580-3149599 | MS.gene050896:CDS | 45.0% | |
| GAAGAACCAAGCTTTGCTTC+CGG | + | chr7.1:3149508-3149527 | None:intergenic | 45.0% | |
| GACTTTAACTGTGATTCCGG+AGG | - | chr7.1:3151830-3151849 | MS.gene050896:CDS | 45.0% | |
| GATCTGGGGAGCAAAACAAT+TGG | - | chr7.1:3151505-3151524 | MS.gene050896:intron | 45.0% | |
| GCAAATGCTGCTGCTAAAGT+TGG | - | chr7.1:3147969-3147988 | MS.gene050896:intron | 45.0% | |
| GCAAGATGGAAGGACATTTG+AGG | - | chr7.1:3149414-3149433 | MS.gene050896:intron | 45.0% | |
| GGAATCCAATCTCAGCTTGT+AGG | - | chr7.1:3151851-3151870 | MS.gene050896:CDS | 45.0% | |
| GGCAAGCAAGCTACTATACA+AGG | + | chr7.1:3149182-3149201 | None:intergenic | 45.0% | |
| GGCACAAAAGGTTCATCCAA+AGG | - | chr7.1:3148212-3148231 | MS.gene050896:intron | 45.0% | |
| GTTATCTGCTTGTATGGCAC+AGG | - | chr7.1:3149944-3149963 | MS.gene050896:intron | 45.0% | |
| GTTGACCTCACCTAAAGGTT+TGG | + | chr7.1:3148708-3148727 | None:intergenic | 45.0% | |
| TACCTCCTTCATGCTTTCCA+CGG | + | chr7.1:3151405-3151424 | None:intergenic | 45.0% | |
| TACTGTTCTTGCTTGGTCTG+TGG | - | chr7.1:3148457-3148476 | MS.gene050896:intron | 45.0% | |
| TAGGGTGGCTTAAGATCTGA+TGG | - | chr7.1:3148498-3148517 | MS.gene050896:intron | 45.0% | |
| TCCTTAGACATGTCCGAAGA+AGG | + | chr7.1:3147885-3147904 | None:intergenic | 45.0% | |
| TCCTTCTTCGGACATGTCTA+AGG | - | chr7.1:3147881-3147900 | MS.gene050896:intron | 45.0% | |
| TGAATTTGATGGAAAGCCCG+TGG | - | chr7.1:3151385-3151404 | MS.gene050896:intron | 45.0% | |
| TGGCTGTAAAAGATGTCTCC+TGG | - | chr7.1:3149631-3149650 | MS.gene050896:CDS | 45.0% | |
| TGGGTAGTTTATGCGGGAAA+AGG | + | chr7.1:3149874-3149893 | None:intergenic | 45.0% | |
| TGGTCGAAAGACGACAAATG+TGG | + | chr7.1:3147714-3147733 | None:intergenic | 45.0% | |
| TGTATGACTCAAAGCTAGGG+TGG | - | chr7.1:3148483-3148502 | MS.gene050896:intron | 45.0% | |
| TGTATGGCACAGGGAAATTC+TGG | - | chr7.1:3149954-3149973 | MS.gene050896:intron | 45.0% | |
| TTGTCGTCTTTCGACCAACA+TGG | - | chr7.1:3147717-3147736 | MS.gene050896:CDS | 45.0% | |
| ! | AGCTTGCTTGCCAGAACAAT+TGG | - | chr7.1:3149132-3149151 | MS.gene050896:CDS | 45.0% |
| ! | GAAGTGCTACTGTTCTTGCT+TGG | - | chr7.1:3148450-3148469 | MS.gene050896:intron | 45.0% |
| ! | TATGATAGTGAAGCCATGGG+CGG | - | chr7.1:3150738-3150757 | MS.gene050896:intron | 45.0% |
| !! | ATGAAAGTGTTGGCTGCTGA+TGG | - | chr7.1:3150023-3150042 | MS.gene050896:intron | 45.0% |
| !! | TGAAAGTGTTGGCTGCTGAT+GGG | - | chr7.1:3150024-3150043 | MS.gene050896:intron | 45.0% |
| AACGATACCCACAGCTCCAA+CGG | + | chr7.1:3147300-3147319 | None:intergenic | 50.0% | |
| AAGCTTTGCTTCCGGAAGTG+GGG | + | chr7.1:3149500-3149519 | None:intergenic | 50.0% | |
| ACCTCCTTCATGCTTTCCAC+GGG | + | chr7.1:3151404-3151423 | None:intergenic | 50.0% | |
| ATGGCACAGGGAAATTCTGG+AGG | - | chr7.1:3149957-3149976 | MS.gene050896:intron | 50.0% | |
| ATGGCTATTACCCAATCCCC+GGG | + | chr7.1:3149544-3149563 | None:intergenic | 50.0% | |
| CAAGCTTTGCTTCCGGAAGT+GGG | + | chr7.1:3149501-3149520 | None:intergenic | 50.0% | |
| CATGGCTATTACCCAATCCC+CGG | + | chr7.1:3149545-3149564 | None:intergenic | 50.0% | |
| GACATGTCCGAAGAAGGAAC+AGG | + | chr7.1:3147879-3147898 | None:intergenic | 50.0% | |
| GGGCCACTTGTCAATATGGA+TGG | - | chr7.1:3149978-3149997 | MS.gene050896:intron | 50.0% | |
| GGGGATTGGGTAATAGCCAT+GGG | - | chr7.1:3149544-3149563 | MS.gene050896:CDS | 50.0% | |
| GTAGAAGTTTGAACCGCCCA+TGG | + | chr7.1:3150754-3150773 | None:intergenic | 50.0% | |
| TAGGAACGTTCGTACGTGTG+CGG | - | chr7.1:3147625-3147644 | MS.gene050896:intron | 50.0% | |
| TCTTCAACTAGGCTTCGTCC+CGG | - | chr7.1:3149523-3149542 | MS.gene050896:intron | 50.0% | |
| TGGAGGGCCACTTGTCAATA+TGG | - | chr7.1:3149974-3149993 | MS.gene050896:intron | 50.0% | |
| TGGCACAGGGAAATTCTGGA+GGG | - | chr7.1:3149958-3149977 | MS.gene050896:intron | 50.0% | |
| TTGAACAGAAGCTCTGCCGT+TGG | - | chr7.1:3147281-3147300 | MS.gene050896:CDS | 50.0% | |
| ! | AAAGCCCGTGGAAAGCATGA+AGG | - | chr7.1:3151397-3151416 | MS.gene050896:intron | 50.0% |
| ! | AGCTTGCTTGCCGGATCAAT+TGG | - | chr7.1:3149190-3149209 | MS.gene050896:intron | 50.0% |
| !! | ACAGGGAAGAGTATTGGCTC+TGG | - | chr7.1:3148128-3148147 | MS.gene050896:intron | 50.0% |
| AAGGGAATGCGGACAACCCA+TGG | + | chr7.1:3149563-3149582 | None:intergenic | 55.0% | |
| AGAGTGATACGGCCATGGCT+TGG | - | chr7.1:3150399-3150418 | MS.gene050896:intron | 55.0% | |
| CCAAGCTTTGCTTCCGGAAG+TGG | + | chr7.1:3149502-3149521 | None:intergenic | 55.0% | |
| CCACTTCCGGAAGCAAAGCT+TGG | - | chr7.1:3149499-3149518 | MS.gene050896:intron | 55.0% | |
| CGGGGATTGGGTAATAGCCA+TGG | - | chr7.1:3149543-3149562 | MS.gene050896:CDS | 55.0% | |
| CTTCAACTAGGCTTCGTCCC+GGG | - | chr7.1:3149524-3149543 | MS.gene050896:intron | 55.0% | |
| TCAGGAGAGTGATACGGCCA+TGG | - | chr7.1:3150394-3150413 | MS.gene050896:intron | 55.0% | |
| TTCAACTAGGCTTCGTCCCG+GGG | - | chr7.1:3149525-3149544 | MS.gene050896:intron | 55.0% | |
| ! | CAAAGTTGGGGTGCCCATGA+AGG | - | chr7.1:3151776-3151795 | MS.gene050896:CDS | 55.0% |
| ! | GCTGTGGGTATCGTTGCTGT+TGG | - | chr7.1:3147305-3147324 | MS.gene050896:CDS | 55.0% |
| !! | AGTGTTGGCTGCTGATGGGT+TGG | - | chr7.1:3150028-3150047 | MS.gene050896:intron | 55.0% |
| !! | GTGTTGGCTGCTGATGGGTT+GGG | - | chr7.1:3150029-3150048 | MS.gene050896:intron | 55.0% |
| AAGCTCTGCCGTTGGAGCTG+TGG | - | chr7.1:3147289-3147308 | MS.gene050896:CDS | 60.0% | |
| AGCTCTGCCGTTGGAGCTGT+GGG | - | chr7.1:3147290-3147309 | MS.gene050896:CDS | 60.0% | |
| GAACCCAGCACGATCACCAG+GGG | + | chr7.1:3151345-3151364 | None:intergenic | 60.0% | |
| GGAACCCAGCACGATCACCA+GGG | + | chr7.1:3151346-3151365 | None:intergenic | 60.0% | |
| TAGGCTTCGTCCCGGGGATT+GGG | - | chr7.1:3149531-3149550 | MS.gene050896:CDS | 60.0% | |
| TAGGTAACTCCTGGGTCCCC+TGG | - | chr7.1:3151326-3151345 | MS.gene050896:intron | 60.0% | |
| ! | GCCCGTGGAAAGCATGAAGG+AGG | - | chr7.1:3151400-3151419 | MS.gene050896:CDS | 60.0% |
| CGGAACCCAGCACGATCACC+AGG | + | chr7.1:3151347-3151366 | None:intergenic | 65.0% | |
| CTAGGCTTCGTCCCGGGGAT+TGG | - | chr7.1:3149530-3149549 | MS.gene050896:CDS | 65.0% | |
| GATCGTGCTGGGTTCCGTCC+TGG | - | chr7.1:3151350-3151369 | MS.gene050896:intron | 65.0% | |
| GGTCCCCTGGTGATCGTGCT+GGG | - | chr7.1:3151339-3151358 | MS.gene050896:intron | 65.0% | |
| GCACGATCACCAGGGGACCC+AGG | + | chr7.1:3151338-3151357 | None:intergenic | 70.0% | |
| GGGTCCCCTGGTGATCGTGC+TGG | - | chr7.1:3151338-3151357 | MS.gene050896:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3147266 | 3151872 | 3147266 | ID=MS.gene050896 |
| chr7.1 | mRNA | 3147266 | 3151872 | 3147266 | ID=MS.gene050896.t1;Parent=MS.gene050896 |
| chr7.1 | exon | 3151773 | 3151872 | 3151773 | ID=MS.gene050896.t1.exon1;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3151773 | 3151872 | 3151773 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3151400 | 3151510 | 3151400 | ID=MS.gene050896.t1.exon2;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3151400 | 3151510 | 3151400 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3151115 | 3151294 | 3151115 | ID=MS.gene050896.t1.exon3;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3151115 | 3151294 | 3151115 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3150900 | 3151027 | 3150900 | ID=MS.gene050896.t1.exon4;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3150900 | 3151027 | 3150900 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3149527 | 3149738 | 3149527 | ID=MS.gene050896.t1.exon5;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3149527 | 3149738 | 3149527 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3149284 | 3149365 | 3149284 | ID=MS.gene050896.t1.exon6;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3149284 | 3149365 | 3149284 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3149030 | 3149172 | 3149030 | ID=MS.gene050896.t1.exon7;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3149030 | 3149172 | 3149030 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3148620 | 3148740 | 3148620 | ID=MS.gene050896.t1.exon8;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3148620 | 3148740 | 3148620 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3147717 | 3147809 | 3147717 | ID=MS.gene050896.t1.exon9;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3147717 | 3147809 | 3147717 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| chr7.1 | exon | 3147266 | 3147382 | 3147266 | ID=MS.gene050896.t1.exon10;Parent=MS.gene050896.t1 |
| chr7.1 | CDS | 3147266 | 3147382 | 3147266 | ID=cds.MS.gene050896.t1;Parent=MS.gene050896.t1 |
| Gene Sequence |
| Protein sequence |
