AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23161

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23161.t1 MTR_7g051650 88.991 327 36 0 9 335 208 534 0.0 617
MS.gene23161.t1 MTR_7g051650 88.991 327 36 0 9 335 212 538 0.0 617
MS.gene23161.t1 MTR_7g056747 85.015 327 34 1 9 335 92 403 0.0 577
MS.gene23161.t1 MTR_7g051510 77.778 324 71 1 9 332 212 534 0.0 531
MS.gene23161.t1 MTR_7g051610 77.778 324 71 1 9 332 212 534 0.0 527
MS.gene23161.t1 MTR_7g033860 64.486 321 113 1 10 330 193 512 2.17e-152 438
MS.gene23161.t1 MTR_0108s0030 59.502 321 111 1 10 330 148 449 2.88e-142 410
MS.gene23161.t1 MTR_4g066210 42.121 330 179 3 11 329 189 517 1.71e-82 259
MS.gene23161.t1 MTR_4g066340 41.692 331 179 4 11 329 109 437 2.60e-82 256
MS.gene23161.t1 MTR_4g066240 41.515 330 181 3 11 329 182 510 1.02e-81 257
MS.gene23161.t1 MTR_4g066630 41.071 336 186 3 9 333 183 517 3.89e-81 256
MS.gene23161.t1 MTR_6g078330 39.701 335 190 3 6 329 74 407 3.78e-80 250
MS.gene23161.t1 MTR_4g066240 41.390 331 181 4 11 329 182 511 4.69e-80 253
MS.gene23161.t1 MTR_6g078330 39.701 335 190 3 6 329 74 407 5.06e-80 250
MS.gene23161.t1 MTR_6g078330 39.701 335 190 3 6 329 178 511 5.79e-79 250
MS.gene23161.t1 MTR_6g078380 40.179 336 188 4 6 329 177 511 1.18e-78 249
MS.gene23161.t1 MTR_6g078450 39.701 335 190 4 6 329 177 510 1.33e-78 249
MS.gene23161.t1 MTR_2g098520 39.697 330 187 3 11 329 180 508 3.95e-78 248
MS.gene23161.t1 MTR_4g066580 40.361 332 186 3 9 329 183 513 5.50e-78 248
MS.gene23161.t1 MTR_2g098790 38.485 330 191 3 11 329 184 512 1.08e-77 247
MS.gene23161.t1 MTR_4g066590 39.940 333 188 3 9 330 177 508 3.03e-77 246
MS.gene23161.t1 MTR_2g098540 39.879 331 185 4 11 329 133 461 5.74e-77 243
MS.gene23161.t1 MTR_3g028720 39.759 332 188 3 9 329 182 512 7.83e-77 245
MS.gene23161.t1 MTR_2g098540 39.879 331 185 4 11 329 177 505 1.12e-76 244
MS.gene23161.t1 MTR_4g083000 36.982 338 191 5 9 329 75 407 3.35e-74 234
MS.gene23161.t1 MTR_4g066640 40.244 328 186 5 11 329 185 511 4.78e-74 237
MS.gene23161.t1 MTR_4g083000 36.982 338 191 5 9 329 169 501 3.18e-73 235
MS.gene23161.t1 MTR_3g026280 36.842 323 195 3 14 329 171 491 5.86e-71 229
MS.gene23161.t1 MTR_5g044000 36.716 335 197 5 9 329 187 520 5.87e-71 229
MS.gene23161.t1 MTR_5g071520 39.412 340 183 5 11 329 185 522 5.94e-70 227
MS.gene23161.t1 MTR_4g023000 36.585 328 198 5 9 329 168 492 3.33e-68 221
MS.gene23161.t1 MTR_4g066280 37.117 326 177 5 11 329 187 491 1.11e-67 220
MS.gene23161.t1 MTR_4g066330 37.576 330 180 4 6 329 182 491 1.26e-67 220
MS.gene23161.t1 MTR_3g026400 36.905 336 196 4 6 329 145 476 1.32e-67 219
MS.gene23161.t1 MTR_3g026400 36.905 336 196 4 6 329 176 507 2.43e-67 220
MS.gene23161.t1 MTR_4g081530 36.842 342 195 7 9 333 165 502 3.40e-67 219
MS.gene23161.t1 MTR_2g022760 35.905 337 200 6 7 330 74 407 1.69e-66 215
MS.gene23161.t1 MTR_0110s0040 37.537 341 195 6 2 330 177 511 6.01e-66 216
MS.gene23161.t1 MTR_2g043200 40.606 330 163 10 11 329 210 517 7.24e-66 216
MS.gene23161.t1 MTR_4g131810 35.549 346 201 5 2 330 164 504 1.24e-65 216
MS.gene23161.t1 MTR_2g022760 35.905 337 200 6 7 330 177 510 1.69e-65 215
MS.gene23161.t1 MTR_7g068900 37.195 328 194 6 9 329 96 418 1.84e-65 214
MS.gene23161.t1 MTR_3g026620 38.973 331 190 4 9 329 180 508 4.36e-65 214
MS.gene23161.t1 MTR_0110s0030 37.092 337 202 5 2 330 177 511 5.28e-65 214
MS.gene23161.t1 MTR_3g033790 35.474 327 197 6 9 329 161 479 1.39e-64 212
MS.gene23161.t1 MTR_4g015420 37.389 337 170 10 11 329 210 523 3.65e-64 212
MS.gene23161.t1 MTR_4g015460 36.950 341 175 10 6 329 182 499 4.65e-64 211
MS.gene23161.t1 MTR_7g068910 35.758 330 195 6 9 329 182 503 6.00e-64 211
MS.gene23161.t1 MTR_7g068910 35.758 330 195 6 9 329 172 493 7.09e-64 211
MS.gene23161.t1 MTR_2g079580 37.353 340 186 9 8 329 173 503 5.58e-63 209
MS.gene23161.t1 MTR_4g131800 34.218 339 201 5 7 329 656 988 1.95e-62 214
MS.gene23161.t1 MTR_3g033810 34.862 327 200 6 9 329 163 482 4.73e-61 203
MS.gene23161.t1 MTR_4g066630 40.647 278 153 3 9 275 183 459 1.06e-60 201
MS.gene23161.t1 MTR_5g068740 36.795 337 183 9 9 329 166 488 2.02e-60 202
MS.gene23161.t1 MTR_2g079550 36.176 340 190 9 8 329 171 501 2.16e-60 202
MS.gene23161.t1 MTR_2g022710 33.628 339 203 6 8 330 75 407 2.36e-60 199
MS.gene23161.t1 MTR_2g022710 33.628 339 203 6 8 330 176 508 1.43e-59 199
MS.gene23161.t1 MTR_3g028720 39.568 278 156 3 9 275 182 458 2.97e-59 197
MS.gene23161.t1 MTR_4g016920 35.103 339 198 8 9 334 75 404 5.60e-59 196
MS.gene23161.t1 MTR_4g066240 42.324 241 132 2 11 245 182 421 1.30e-58 195
MS.gene23161.t1 MTR_1g088610 36.795 337 182 10 9 329 166 487 3.47e-58 198
MS.gene23161.t1 MTR_1g088610 37.838 111 67 2 220 329 503 612 5.43e-14 73.2
MS.gene23161.t1 MTR_4g016920 35.312 337 200 7 9 334 168 497 4.96e-58 196
MS.gene23161.t1 MTR_4g066630 42.387 243 133 2 9 245 183 424 5.66e-58 194
MS.gene23161.t1 MTR_6g078450 38.790 281 160 4 6 275 177 456 6.38e-58 194
MS.gene23161.t1 MTR_4g066580 41.700 247 137 2 9 249 183 428 1.47e-56 189
MS.gene23161.t1 MTR_3g028720 41.564 243 135 2 9 245 182 423 1.77e-56 189
MS.gene23161.t1 MTR_4g067040 40.260 231 131 2 9 233 178 407 6.45e-51 174
MS.gene23161.t1 MTR_4g067040 42.718 206 111 2 9 208 178 382 1.22e-48 167
MS.gene23161.t1 MTR_1g088630 34.808 339 162 12 9 329 134 431 1.33e-47 167
MS.gene23161.t1 MTR_6g078330 41.414 198 110 1 6 197 178 375 1.95e-47 164
MS.gene23161.t1 MTR_4g066630 44.022 184 97 1 9 186 183 366 4.42e-47 163
MS.gene23161.t1 MTR_2g079580 38.645 251 133 7 8 245 173 415 1.01e-45 160
MS.gene23161.t1 MTR_3g028720 40.291 206 116 2 9 208 182 386 1.10e-44 157
MS.gene23161.t1 MTR_4g066640 41.584 202 113 4 11 208 185 385 8.94e-44 155
MS.gene23161.t1 MTR_0110s0040 42.021 188 103 3 2 184 177 363 3.08e-42 151
MS.gene23161.t1 MTR_4g016920 39.888 178 97 3 9 178 75 250 2.75e-41 146
MS.gene23161.t1 MTR_2g022710 32.042 284 172 5 8 275 176 454 3.14e-41 150
MS.gene23161.t1 MTR_2g022710 32.042 284 172 5 8 275 176 454 4.15e-41 149
MS.gene23161.t1 MTR_3g026400 39.785 186 103 2 6 184 176 359 6.49e-40 144
MS.gene23161.t1 MTR_2g022710 33.333 249 150 4 8 245 176 419 2.25e-38 141
MS.gene23161.t1 MTR_2g022710 32.479 234 142 4 8 230 176 404 2.02e-33 127
MS.gene23161.t1 MTR_2g022710 36.571 175 106 1 8 177 176 350 1.78e-31 122
MS.gene23161.t1 MTR_1g088630 33.186 226 100 7 9 221 166 353 1.08e-25 105
MS.gene23161.t1 MTR_8g038650 43.137 102 58 0 85 186 57 158 7.55e-25 99.0
MS.gene23161.t1 MTR_4g122980 27.245 323 158 11 7 317 263 520 8.55e-18 84.7
MS.gene23161.t1 MTR_1g088630 34.921 126 71 3 9 125 166 289 2.27e-17 81.6
MS.gene23161.t1 MTR_0110s0020 40.659 91 49 2 2 87 177 267 4.19e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23161.t1 AT3G60130 40.673 327 184 5 11 329 124 448 3.79e-74 236
MS.gene23161.t1 AT3G60130 40.673 327 184 5 11 329 176 500 1.86e-73 236
MS.gene23161.t1 AT2G44480 37.910 335 197 4 9 333 77 410 1.07e-72 231
MS.gene23161.t1 AT3G60130 40.367 327 174 6 11 329 124 437 2.09e-72 231
MS.gene23161.t1 AT2G44480 37.952 332 195 4 9 330 179 509 1.12e-71 231
MS.gene23161.t1 AT2G44450 36.503 326 198 3 11 329 26 349 2.37e-71 226
MS.gene23161.t1 AT3G60140 36.716 335 193 5 11 329 171 502 2.48e-71 232
MS.gene23161.t1 AT2G44480 37.952 332 195 4 9 330 210 540 2.65e-71 231
MS.gene23161.t1 AT1G26560 37.389 337 188 6 11 329 175 506 6.01e-71 229
MS.gene23161.t1 AT1G51470 38.973 331 183 8 11 330 188 510 1.32e-69 226
MS.gene23161.t1 AT2G44450 36.503 326 198 3 11 329 177 500 1.42e-69 225
MS.gene23161.t1 AT5G44640 35.976 328 200 4 11 330 177 502 3.15e-68 222
MS.gene23161.t1 AT1G47600 37.273 330 189 6 11 330 188 509 8.24e-68 221
MS.gene23161.t1 AT2G44470 36.336 333 199 4 11 330 174 506 9.08e-68 223
MS.gene23161.t1 AT2G44490 37.685 337 194 5 11 332 160 495 1.07e-67 222
MS.gene23161.t1 AT3G60120 36.747 332 196 6 11 329 159 489 2.10e-67 221
MS.gene23161.t1 AT5G54570 35.928 334 197 6 11 329 77 408 3.15e-67 218
MS.gene23161.t1 AT1G47600 37.462 331 188 7 11 330 188 510 4.15e-67 219
MS.gene23161.t1 AT2G44460 38.024 334 193 5 11 331 28 360 8.26e-67 216
MS.gene23161.t1 AT5G54570 35.928 334 197 6 11 329 174 505 2.44e-66 218
MS.gene23161.t1 AT4G27830 37.725 334 179 7 11 329 77 396 4.87e-66 214
MS.gene23161.t1 AT5G42260 36.223 323 196 4 11 325 177 497 1.22e-65 215
MS.gene23161.t1 AT5G36890 36.061 330 198 6 10 332 159 482 1.85e-65 214
MS.gene23161.t1 AT2G44460 38.024 334 193 5 11 331 174 506 1.97e-65 216
MS.gene23161.t1 AT5G36890 36.061 330 198 6 10 332 159 482 2.42e-65 214
MS.gene23161.t1 AT4G27830 37.725 334 179 7 11 329 165 484 3.45e-65 214
MS.gene23161.t1 AT5G24550 36.036 333 199 5 11 329 177 509 9.70e-64 211
MS.gene23161.t1 AT1G61810 34.731 334 205 5 8 329 75 407 1.93e-63 207
MS.gene23161.t1 AT2G44480 37.755 294 176 3 45 333 15 306 2.53e-63 204
MS.gene23161.t1 AT3G18080 36.716 335 191 7 9 329 180 507 2.58e-63 209
MS.gene23161.t1 AT3G62750 37.188 320 192 6 11 329 77 388 5.01e-63 206
MS.gene23161.t1 AT3G62750 37.188 320 192 6 11 329 77 388 5.01e-63 206
MS.gene23161.t1 AT1G61810 34.731 334 205 5 8 329 175 507 1.25e-62 207
MS.gene23161.t1 AT1G61820 33.724 341 205 6 5 329 30 365 1.58e-62 204
MS.gene23161.t1 AT1G45191 35.061 328 196 6 9 329 166 483 2.03e-62 207
MS.gene23161.t1 AT4G21760 35.312 337 193 7 8 329 195 521 2.43e-62 207
MS.gene23161.t1 AT2G25630 34.862 327 186 5 11 329 176 483 2.72e-62 206
MS.gene23161.t1 AT3G18070 34.132 334 211 3 8 333 91 423 4.33e-62 204
MS.gene23161.t1 AT3G62750 36.646 322 191 6 11 329 162 473 4.75e-62 206
MS.gene23161.t1 AT3G09260 36.716 335 198 5 9 330 178 511 5.78e-62 206
MS.gene23161.t1 AT5G25980 36.254 331 197 6 11 329 194 522 6.33e-62 206
MS.gene23161.t1 AT3G62750 36.646 322 191 6 11 329 188 499 6.36e-62 206
MS.gene23161.t1 AT3G62740 34.985 323 199 5 11 329 163 478 6.68e-62 205
MS.gene23161.t1 AT3G03640 36.716 335 194 6 11 329 180 512 9.26e-62 206
MS.gene23161.t1 AT3G18070 34.132 334 211 3 8 333 168 500 2.43e-61 204
MS.gene23161.t1 AT3G18070 34.769 325 203 3 17 333 171 494 3.65e-61 203
MS.gene23161.t1 AT1G61820 33.724 341 205 6 5 329 169 504 4.16e-61 204
MS.gene23161.t1 AT1G45191 34.030 335 196 6 9 329 166 489 4.44e-61 203
MS.gene23161.t1 AT4G27820 37.612 335 179 8 11 329 77 397 5.53e-61 201
MS.gene23161.t1 AT4G27820 37.612 335 179 8 11 329 77 397 5.53e-61 201
MS.gene23161.t1 AT1G02850 34.756 328 200 6 9 329 165 485 8.61e-61 202
MS.gene23161.t1 AT1G66280 37.719 342 188 8 6 329 176 510 1.69e-60 202
MS.gene23161.t1 AT1G45191 33.529 340 196 6 9 329 166 494 2.67e-60 201
MS.gene23161.t1 AT1G45191 33.529 340 196 6 9 329 178 506 3.23e-60 201
MS.gene23161.t1 AT4G22100 36.061 330 196 7 9 329 159 482 3.99e-60 201
MS.gene23161.t1 AT4G27820 37.612 335 179 8 11 329 162 482 4.67e-60 201
MS.gene23161.t1 AT1G66270 36.550 342 196 6 5 330 175 511 1.88e-59 199
MS.gene23161.t1 AT1G66270 36.550 342 196 6 5 330 173 509 2.03e-59 199
MS.gene23161.t1 AT4G21760 34.328 335 189 8 8 329 195 511 5.97e-59 198
MS.gene23161.t1 AT1G61810 34.579 321 197 5 8 316 175 494 1.91e-58 197
MS.gene23161.t1 AT5G24540 36.336 333 198 5 11 329 177 509 4.13e-58 196
MS.gene23161.t1 AT3G21370 36.257 342 187 9 11 329 178 511 6.48e-58 195
MS.gene23161.t1 AT5G28510 35.000 340 202 6 9 330 182 520 9.67e-58 195
MS.gene23161.t1 AT5G26000 34.421 337 200 7 11 331 182 513 1.84e-57 194
MS.gene23161.t1 AT1G02850 32.479 351 200 7 9 329 165 508 1.02e-56 192
MS.gene23161.t1 AT1G60090 35.015 337 198 9 9 334 161 487 1.04e-56 192
MS.gene23161.t1 AT1G75940 35.411 353 181 9 9 329 180 517 7.07e-56 190
MS.gene23161.t1 AT1G02850 32.386 352 200 8 9 329 165 509 4.10e-55 188
MS.gene23161.t1 AT3G18070 33.441 311 198 3 31 333 2 311 5.63e-55 182
MS.gene23161.t1 AT1G60090 33.623 345 199 8 9 334 161 494 6.20e-55 187
MS.gene23161.t1 AT1G52400 35.693 339 191 8 11 329 184 515 2.88e-54 186
MS.gene23161.t1 AT1G52400 35.693 339 191 8 11 329 184 515 2.88e-54 186
MS.gene23161.t1 AT5G48375 35.974 303 144 7 11 308 168 425 2.42e-52 179
MS.gene23161.t1 AT2G32860 31.563 339 205 8 11 329 240 571 2.96e-51 179
MS.gene23161.t1 AT5G16580 35.714 280 171 5 10 286 26 299 8.13e-51 171
MS.gene23161.t1 AT2G32860 32.335 334 208 7 11 329 240 570 1.11e-50 178
MS.gene23161.t1 AT1G02850 32.317 328 181 7 9 329 165 458 1.92e-50 174
MS.gene23161.t1 AT5G54570 35.484 279 164 5 11 275 174 450 8.98e-50 172
MS.gene23161.t1 AT3G62740 35.075 268 164 4 11 275 163 423 5.89e-49 169
MS.gene23161.t1 AT3G60140 35.950 242 148 2 11 245 171 412 7.32e-49 170
MS.gene23161.t1 AT5G25980 35.636 275 165 4 11 275 194 466 6.27e-48 167
MS.gene23161.t1 AT5G25980 35.636 275 165 4 11 275 194 466 6.27e-48 167
MS.gene23161.t1 AT2G44470 35.018 277 168 3 11 275 174 450 1.63e-47 166
MS.gene23161.t1 AT3G62750 36.296 270 160 5 11 278 188 447 4.56e-47 165
MS.gene23161.t1 AT3G18070 34.836 244 154 1 8 246 91 334 1.09e-44 156
MS.gene23161.t1 AT5G26000 34.191 272 160 5 11 268 182 448 6.84e-43 154
MS.gene23161.t1 AT1G61810 33.878 245 155 3 8 245 175 419 1.38e-40 147
MS.gene23161.t1 AT5G24540 35.612 278 166 4 11 275 177 454 3.17e-40 147
MS.gene23161.t1 AT1G45191 36.224 196 120 2 9 199 166 361 4.19e-39 143
MS.gene23161.t1 AT1G45191 36.181 199 121 3 9 202 166 363 4.26e-39 143
MS.gene23161.t1 AT3G62750 40.000 170 99 2 11 180 162 328 5.78e-39 142
MS.gene23161.t1 AT3G62750 40.000 170 99 2 11 180 162 328 5.78e-39 142
MS.gene23161.t1 AT1G02850 31.579 266 147 5 9 245 165 424 1.23e-38 142
MS.gene23161.t1 AT1G60270 41.667 168 89 2 11 171 77 242 1.84e-38 138
MS.gene23161.t1 AT3G62750 40.000 170 99 2 11 180 188 354 3.45e-38 141
MS.gene23161.t1 AT1G60270 38.298 188 107 2 11 191 164 349 1.59e-37 138
MS.gene23161.t1 AT3G18070 33.937 221 141 1 31 246 2 222 2.67e-37 134
MS.gene23161.t1 AT1G52400 34.507 284 160 7 11 275 184 460 3.08e-37 139
MS.gene23161.t1 AT3G18070 37.931 174 103 1 8 176 168 341 1.73e-36 135
MS.gene23161.t1 AT2G44470 36.413 184 110 2 11 187 174 357 6.68e-34 129
MS.gene23161.t1 AT2G44480 39.157 166 95 3 9 169 210 374 2.81e-33 127
MS.gene23161.t1 AT1G51490 35.795 176 100 6 11 180 162 330 1.84e-23 100
MS.gene23161.t1 AT1G61810 34.677 124 76 1 8 126 175 298 1.79e-18 85.1
MS.gene23161.t1 AT3G06510 26.000 350 194 12 3 329 236 543 1.39e-17 84.3
MS.gene23161.t1 AT3G06510 25.740 338 176 11 3 329 236 509 1.18e-16 81.3

Find 62 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTAATCTTGGTTCTATT+TGG 0.177781 7.2:-50827974 None:intergenic
AATATGTCTTACCTGGAATT+TGG 0.183048 7.2:-50827295 None:intergenic
TTTCTCATTTGTTGTGAATT+CGG 0.243291 7.2:-50827882 None:intergenic
TGTTCGTCTTTCAATGGATT+TGG 0.245425 7.2:-50828620 None:intergenic
AGAATCTACATCACTGAAAA+TGG 0.258729 7.2:+50828472 MS.gene23161:CDS
GCAGTTCAAGAGGGAGAAAT+TGG 0.283757 7.2:+50827546 MS.gene23161:CDS
AATAATTTGTAGGACCAATA+TGG 0.300027 7.2:+50828379 MS.gene23161:intron
AAAGGAAGTACAGACTTTAT+TGG 0.307324 7.2:+50827914 MS.gene23161:CDS
TTCTCATTTGTTGTGAATTC+GGG 0.312449 7.2:-50827881 None:intergenic
GTTCGTCTTTCAATGGATTT+GGG 0.327576 7.2:-50828619 None:intergenic
AACTTACTTAATTGCTGCTT+TGG 0.329115 7.2:-50828678 None:intergenic
GTATACATAGCTTGGAGTTC+CGG 0.331648 7.2:-50827147 None:intergenic
TACTGACAAACACAGCTAAA+TGG 0.340167 7.2:+50829747 MS.gene23161:CDS
CAATGGATATTCTAAACATA+TGG 0.345398 7.2:+50829685 MS.gene23161:CDS
AAGGAAGTACAGACTTTATT+GGG 0.346048 7.2:+50827915 MS.gene23161:CDS
ATTGTCAATAGGATTAATCT+TGG 0.383120 7.2:-50827984 None:intergenic
AAAGACTAACAGATTTCAAA+TGG 0.396482 7.2:+50827634 MS.gene23161:CDS
TATACTTACATGGGAAATCT+AGG 0.397296 7.2:+50827165 MS.gene23161:CDS
ATCCTGAGGCTTGGAACTAT+AGG 0.402618 7.2:-50827598 None:intergenic
AAGGCATCAAAATTGTCAAT+AGG 0.422397 7.2:-50827995 None:intergenic
GTTATACAAGTCCAAATTCC+AGG 0.422977 7.2:+50827284 MS.gene23161:CDS
CCAAGCTATGTATACTTACA+TGG 0.423888 7.2:+50827155 MS.gene23161:CDS
GTTCGATGTTCGTCTTTCAA+TGG 0.424862 7.2:-50828626 None:intergenic
AAGACATTATATAATCCTTC+GGG 0.425230 7.2:-50828418 None:intergenic
CAAGACATTATATAATCCTT+CGG 0.426983 7.2:-50828419 None:intergenic
TCCTGAGGCTTGGAACTATA+GGG 0.430918 7.2:-50827597 None:intergenic
AGACATAGTTACAACCATAT+TGG 0.442280 7.2:-50828393 None:intergenic
ATGGTGATCGAGTGAAATAT+TGG 0.443015 7.2:+50827109 MS.gene23161:CDS
AAAGTATTTGACACTTGATT+CGG 0.448246 7.2:+50829775 MS.gene23161:CDS
GATCACCATATGTTTCGAAT+AGG 0.457073 7.2:-50827095 None:intergenic
AATGGATATTCTAAACATAT+GGG 0.466396 7.2:+50829686 MS.gene23161:CDS
AAGACTAACAGATTTCAAAT+GGG 0.467207 7.2:+50827635 MS.gene23161:CDS
CCATGTAAGTATACATAGCT+TGG 0.472018 7.2:-50827155 None:intergenic
TAGTTCCAAGCCTCAGGATG+TGG 0.490504 7.2:+50827602 MS.gene23161:CDS
GAGCTCCTATTCGAAACATA+TGG 0.495479 7.2:+50827090 MS.gene23161:CDS
TCCCTATAGTTCCAAGCCTC+AGG 0.497302 7.2:+50827596 MS.gene23161:CDS
AAATCTAGGTTCTTATTCTA+CGG 0.500597 7.2:+50827179 MS.gene23161:CDS
AGTGACGGCGTAAACGTTCG+TGG 0.513350 7.2:+50829623 MS.gene23161:intron
GGATTTGGGATTTCGTAAGA+AGG 0.520252 7.2:-50828605 None:intergenic
AGCATCCACATCCTGAGGCT+TGG 0.530262 7.2:-50827607 None:intergenic
AATGAGAAAGAAATGTTGAA+AGG 0.546175 7.2:+50827896 MS.gene23161:CDS
TTTACCTTCTGTAACAGCTA+AGG 0.548702 7.2:-50828014 None:intergenic
AAAATAATGAGAAAACTAGT+GGG 0.552473 7.2:+50827848 MS.gene23161:CDS
TAACTTTGAAACTGTAGCAT+GGG 0.556412 7.2:-50827265 None:intergenic
GGATAATCCCCGTTGAACAA+TGG 0.565796 7.2:-50827824 None:intergenic
GATGCCTTAGCTGTTACAGA+AGG 0.566721 7.2:+50828010 MS.gene23161:CDS
TTGGACTACATTCAATGAGC+CGG 0.573984 7.2:+50827128 MS.gene23161:CDS
TAACAGATTTCAAATGGGGA+TGG 0.588010 7.2:+50827640 MS.gene23161:CDS
TTTGGTAGCATTTATATGTG+CGG 0.604159 7.2:-50828660 None:intergenic
ATAACTTTGAAACTGTAGCA+TGG 0.607588 7.2:-50827266 None:intergenic
TGAGCAGCATCCACATCCTG+AGG 0.615247 7.2:-50827612 None:intergenic
CAAGCTATGTATACTTACAT+GGG 0.618444 7.2:+50827156 MS.gene23161:CDS
TTGACATAGGCAGTTCAAGA+GGG 0.626479 7.2:+50827537 MS.gene23161:intron
TCTAGGTTCTTATTCTACGG+AGG 0.635634 7.2:+50827182 MS.gene23161:CDS
AGACTAACAGATTTCAAATG+GGG 0.641684 7.2:+50827636 MS.gene23161:CDS
ATGGATATTCTAAACATATG+GGG 0.647267 7.2:+50829687 MS.gene23161:CDS
TGTAACTATGTCTACCCCGA+AGG 0.653655 7.2:+50828403 MS.gene23161:CDS
TGTTGGAGCAGAGTAATACC+AGG 0.658908 7.2:+50825533 MS.gene23161:CDS
TTTGACATAGGCAGTTCAAG+AGG 0.664429 7.2:+50827536 MS.gene23161:intron
AAATAATGAGAAAACTAGTG+GGG 0.686151 7.2:+50827849 MS.gene23161:CDS
TTTAGAGCCATTGTTCAACG+GGG 0.731687 7.2:+50827817 MS.gene23161:CDS
AGACATTATATAATCCTTCG+GGG 0.774274 7.2:-50828417 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATGTAATATCAAA+AGG + chr7.2:50829472-50829491 MS.gene23161:intron 10.0%
!! ATATATCGTATATAATTATA+TGG + chr7.2:50826362-50826381 MS.gene23161:intron 10.0%
!!! ATAAAGAATGATATTTTTTA+GGG + chr7.2:50828288-50828307 MS.gene23161:intron 10.0%
!!! CAATTATTTTAAAAATAGAA+TGG - chr7.2:50828058-50828077 None:intergenic 10.0%
!!! CATTCTATTTTTAAAATAAT+TGG + chr7.2:50828056-50828075 MS.gene23161:intron 10.0%
!!! TATAAAGAATGATATTTTTT+AGG + chr7.2:50828287-50828306 MS.gene23161:intron 10.0%
!!! TATCTAATTTTTATTTTCTA+AGG + chr7.2:50828735-50828754 MS.gene23161:intron 10.0%
!!! TTATGTTAAAATCAAATTTT+AGG + chr7.2:50827046-50827065 MS.gene23161:intron 10.0%
!! AACAAAAATTACAAATCTTA+AGG - chr7.2:50829451-50829470 None:intergenic 15.0%
!! AATTTAATTCATAGAGTTTA+TGG - chr7.2:50828125-50828144 None:intergenic 15.0%
!! ACAAAAATTACAAATCTTAA+GGG - chr7.2:50829450-50829469 None:intergenic 15.0%
!! ATTATTATATATTGCAAGAA+AGG - chr7.2:50826593-50826612 None:intergenic 15.0%
!! CTAATTATTGCAATAAATAT+TGG - chr7.2:50826751-50826770 None:intergenic 15.0%
!! TATATTTCTTTACATAAAGA+TGG + chr7.2:50825789-50825808 MS.gene23161:intron 15.0%
!! TTAAAATAATTGGTATACAA+AGG + chr7.2:50828066-50828085 MS.gene23161:intron 15.0%
!!! AATTATTAACTAGATTTTCT+CGG + chr7.2:50828842-50828861 MS.gene23161:intron 15.0%
!!! AATTTTTTTTCTCTTCATTA+GGG - chr7.2:50825761-50825780 None:intergenic 15.0%
!!! ATCAAAAAGTTTTTAAGTTA+AGG + chr7.2:50826240-50826259 MS.gene23161:intron 15.0%
!!! TAAAGAATGATATTTTTTAG+GGG + chr7.2:50828289-50828308 MS.gene23161:intron 15.0%
!!! TAATTTTTTTTCTCTTCATT+AGG - chr7.2:50825762-50825781 None:intergenic 15.0%
!!! TATTCCTTAAACTTATTTTT+AGG - chr7.2:50826306-50826325 None:intergenic 15.0%
!!! TCAAAAAGTTTTTAAGTTAA+GGG + chr7.2:50826241-50826260 MS.gene23161:intron 15.0%
!!! TTTTATTTCTAAAAATTAGC+AGG + chr7.2:50825705-50825724 MS.gene23161:intron 15.0%
!! AAAAATAATGAGAAAACTAG+TGG + chr7.2:50827847-50827866 MS.gene23161:CDS 20.0%
!! AAAACACTAGATCTATAATT+TGG + chr7.2:50826105-50826124 MS.gene23161:intron 20.0%
!! AAAATAATGAGAAAACTAGT+GGG + chr7.2:50827848-50827867 MS.gene23161:CDS 20.0%
!! AAACACTAGATCTATAATTT+GGG + chr7.2:50826106-50826125 MS.gene23161:intron 20.0%
!! AAAGAGTAACTTATTAATTC+AGG + chr7.2:50825606-50825625 MS.gene23161:intron 20.0%
!! AAGAGTAACTTATTAATTCA+GGG + chr7.2:50825607-50825626 MS.gene23161:intron 20.0%
!! AATGGATATTCTAAACATAT+GGG + chr7.2:50829686-50829705 MS.gene23161:CDS 20.0%
!! ATAATTATATGGATATTCAG+AGG + chr7.2:50826373-50826392 MS.gene23161:intron 20.0%
!! ATGTAAAAACAATGATGATT+AGG - chr7.2:50829393-50829412 None:intergenic 20.0%
!! GAAACCTAAAAATAAGTTTA+AGG + chr7.2:50826299-50826318 MS.gene23161:intron 20.0%
!! TATAAAACACAAAATATGAG+TGG - chr7.2:50827692-50827711 None:intergenic 20.0%
!! TGAATTAATAAGTTACTCTT+TGG - chr7.2:50825607-50825626 None:intergenic 20.0%
!! TGTAAAAACAATGATGATTA+GGG - chr7.2:50829235-50829254 None:intergenic 20.0%
!! TTCCATTAAATATTTGACAT+AGG + chr7.2:50827524-50827543 MS.gene23161:intron 20.0%
!!! AAAGAATGATATTTTTTAGG+GGG + chr7.2:50828290-50828309 MS.gene23161:intron 20.0%
!!! AAATTTTAGGAAACATTTCA+AGG + chr7.2:50827059-50827078 MS.gene23161:intron 20.0%
!!! ACTAGTTTTCTCATTATTTT+TGG - chr7.2:50827848-50827867 None:intergenic 20.0%
!!! ATTATTGCTATTACGTTAAT+CGG - chr7.2:50827411-50827430 None:intergenic 20.0%
!!! ATTTTTGTGAGACTAATTTA+AGG - chr7.2:50826995-50827014 None:intergenic 20.0%
!!! CATATCAAATTTTTATCTTG+CGG + chr7.2:50827771-50827790 MS.gene23161:intron 20.0%
!!! CTTTATTTTCTTTAATCTAC+TGG + chr7.2:50825845-50825864 MS.gene23161:intron 20.0%
!!! GTTCACTTTTAATAATTTGT+AGG + chr7.2:50828369-50828388 MS.gene23161:intron 20.0%
!!! TTTAAGGTTGAATCAATTTA+TGG - chr7.2:50826979-50826998 None:intergenic 20.0%
! AAAATTGCATGTTACATGTA+TGG + chr7.2:50827321-50827340 MS.gene23161:intron 25.0%
! AAAGACTAACAGATTTCAAA+TGG + chr7.2:50827634-50827653 MS.gene23161:CDS 25.0%
! AAATAATGAGAAAACTAGTG+GGG + chr7.2:50827849-50827868 MS.gene23161:CDS 25.0%
! AAATCTAGGTTCTTATTCTA+CGG + chr7.2:50827179-50827198 MS.gene23161:CDS 25.0%
! AACACTAGATCTATAATTTG+GGG + chr7.2:50826107-50826126 MS.gene23161:intron 25.0%
! AAGACATTATATAATCCTTC+GGG - chr7.2:50828421-50828440 None:intergenic 25.0%
! AAGACTAACAGATTTCAAAT+GGG + chr7.2:50827635-50827654 MS.gene23161:CDS 25.0%
! AATGAGAAAGAAATGTTGAA+AGG + chr7.2:50827896-50827915 MS.gene23161:CDS 25.0%
! AGTAGTTGTACAACAAATTT+AGG - chr7.2:50825982-50826001 None:intergenic 25.0%
! ATATAAAGAGTTGTACCAAA+TGG + chr7.2:50826398-50826417 MS.gene23161:intron 25.0%
! ATGGATATTCTAAACATATG+GGG + chr7.2:50829687-50829706 MS.gene23161:CDS 25.0%
! ATTCAAGTGAATTTACACAA+TGG - chr7.2:50826931-50826950 None:intergenic 25.0%
! ATTGTCAATAGGATTAATCT+TGG - chr7.2:50827987-50828006 None:intergenic 25.0%
! CAAGACATTATATAATCCTT+CGG - chr7.2:50828422-50828441 None:intergenic 25.0%
! CAATGGATATTCTAAACATA+TGG + chr7.2:50829685-50829704 MS.gene23161:CDS 25.0%
! CACCTAATAAGCATAAATAT+AGG + chr7.2:50826160-50826179 MS.gene23161:intron 25.0%
! CCAAATATAACATTCAATGT+TGG + chr7.2:50825947-50825966 MS.gene23161:intron 25.0%
! CCAACATTGAATGTTATATT+TGG - chr7.2:50825950-50825969 None:intergenic 25.0%
! GTCCTATATTTATGCTTATT+AGG - chr7.2:50826165-50826184 None:intergenic 25.0%
! GTGTAAAAACAATGATGATT+AGG - chr7.2:50829236-50829255 None:intergenic 25.0%
! TACATAAACTCAAATCAGAA+GGG + chr7.2:50828923-50828942 MS.gene23161:intron 25.0%
! TATCACTTTCCTTTCTATTT+AGG + chr7.2:50826044-50826063 MS.gene23161:intron 25.0%
! TATTGTATTGTTCACTTTGA+AGG + chr7.2:50829416-50829435 MS.gene23161:intron 25.0%
! TCGTTAAACTATATTTCACA+TGG + chr7.2:50826545-50826564 MS.gene23161:intron 25.0%
! TCTAAAAATTAGCAGGTTTA+TGG + chr7.2:50825712-50825731 MS.gene23161:intron 25.0%
! TGCCTATGTCAAATATTTAA+TGG - chr7.2:50827529-50827548 None:intergenic 25.0%
! TTAGTCAAACAAAATGCTAA+CGG + chr7.2:50826204-50826223 MS.gene23161:intron 25.0%
!! AAAGTATTTGACACTTGATT+CGG + chr7.2:50829775-50829794 MS.gene23161:CDS 25.0%
!! AATAATTTGTAGGACCAATA+TGG + chr7.2:50828379-50828398 MS.gene23161:intron 25.0%
!! ATTTGAGTTTATGTACAACT+TGG - chr7.2:50828918-50828937 None:intergenic 25.0%
!! TTATTGCTATTACGTTAATC+GGG - chr7.2:50827410-50827429 None:intergenic 25.0%
!! TTTGTTTATACCTCCTTTTA+AGG - chr7.2:50826663-50826682 None:intergenic 25.0%
!! TTTTCAAAATATGTCTTACC+TGG - chr7.2:50827305-50827324 None:intergenic 25.0%
!!! ACTTATTTTTAGGTTTCACT+TGG - chr7.2:50826296-50826315 None:intergenic 25.0%
!!! AGTACATTCATTAGTTTTTG+TGG + chr7.2:50825638-50825657 MS.gene23161:intron 25.0%
!!! GAGTTTTTTTTTTGTTGAAG+AGG - chr7.2:50826452-50826471 None:intergenic 25.0%
!!! TGTTTTTACATTGATAGTGA+CGG + chr7.2:50829608-50829627 MS.gene23161:intron 25.0%
!!! TTTCTCATTTGTTGTGAATT+CGG - chr7.2:50827885-50827904 None:intergenic 25.0%
!!! TTTTCCACATCTTTAGAATT+TGG + chr7.2:50828704-50828723 MS.gene23161:intron 25.0%
AATATGTCTTACCTGGAATT+TGG - chr7.2:50827298-50827317 None:intergenic 30.0%
AATTTATAGGACACACAAGA+TGG - chr7.2:50828954-50828973 None:intergenic 30.0%
AGAACTAGACCTAAATAGAA+AGG - chr7.2:50826056-50826075 None:intergenic 30.0%
AGAATCTACATCACTGAAAA+TGG + chr7.2:50828472-50828491 MS.gene23161:CDS 30.0%
AGACATAGTTACAACCATAT+TGG - chr7.2:50828396-50828415 None:intergenic 30.0%
AGACATTATATAATCCTTCG+GGG - chr7.2:50828420-50828439 None:intergenic 30.0%
AGACTAACAGATTTCAAATG+GGG + chr7.2:50827636-50827655 MS.gene23161:CDS 30.0%
ATTCACAACAACATGACTAA+AGG + chr7.2:50827374-50827393 MS.gene23161:intron 30.0%
CAAGCTATGTATACTTACAT+GGG + chr7.2:50827156-50827175 MS.gene23161:CDS 30.0%
CACAAAATATGAGTGGTTTA+TGG - chr7.2:50827685-50827704 None:intergenic 30.0%
CATTAAAGATCAGTTTCTTG+TGG - chr7.2:50829582-50829601 None:intergenic 30.0%
CTTTACATAAAGATGGTTGA+TGG + chr7.2:50825796-50825815 MS.gene23161:intron 30.0%
GGAGAATATTCATTGCTAAA+CGG + chr7.2:50828981-50829000 MS.gene23161:intron 30.0%
GTACATAAACTCAAATCAGA+AGG + chr7.2:50828922-50828941 MS.gene23161:intron 30.0%
TATACTTACATGGGAAATCT+AGG + chr7.2:50827165-50827184 MS.gene23161:CDS 30.0%
TATTGTATTGTTCACCTTGA+AGG + chr7.2:50829259-50829278 MS.gene23161:intron 30.0%
TGTATAGATGGAACCTTAAA+AGG + chr7.2:50826647-50826666 MS.gene23161:intron 30.0%
TGTGTGTCCTATAAATTCTT+TGG + chr7.2:50828957-50828976 MS.gene23161:intron 30.0%
TTCAATACCTGCACATTTAA+AGG - chr7.2:50826835-50826854 None:intergenic 30.0%
TTCACAACAACATGACTAAA+GGG + chr7.2:50827375-50827394 MS.gene23161:intron 30.0%
TTCTTTGTCTTTCTTAGAGT+AGG + chr7.2:50825913-50825932 MS.gene23161:intron 30.0%
TTTAATCTACTGGTATGTCT+TGG + chr7.2:50825855-50825874 MS.gene23161:intron 30.0%
! AAAGGAAGTACAGACTTTAT+TGG + chr7.2:50827914-50827933 MS.gene23161:CDS 30.0%
! AAAGGAGGTATAAACAAAGA+AGG + chr7.2:50826665-50826684 MS.gene23161:intron 30.0%
! AACTTACTTAATTGCTGCTT+TGG - chr7.2:50828681-50828700 None:intergenic 30.0%
! AAGGAAGTACAGACTTTATT+GGG + chr7.2:50827915-50827934 MS.gene23161:CDS 30.0%
! AAGGCATCAAAATTGTCAAT+AGG - chr7.2:50827998-50828017 None:intergenic 30.0%
! ACTACATTTTCATAGTAGTG+TGG + chr7.2:50825999-50826018 MS.gene23161:intron 30.0%
! ATATTTTGTTGAAGAGCTAG+TGG - chr7.2:50826888-50826907 None:intergenic 30.0%
! CTACATTTTCATAGTAGTGT+GGG + chr7.2:50826000-50826019 MS.gene23161:intron 30.0%
! CTAGCTCTTCAACAAAATAT+TGG + chr7.2:50826888-50826907 MS.gene23161:intron 30.0%
! CTTTCCAAATTCTAAAGATG+TGG - chr7.2:50828711-50828730 None:intergenic 30.0%
! GTTAGTTCAAAAGTTTTACC+TGG - chr7.2:50825554-50825573 None:intergenic 30.0%
! GTTTATGGTGTCAATTTCAA+TGG - chr7.2:50828110-50828129 None:intergenic 30.0%
! TATTGCTATTACGTTAATCG+GGG - chr7.2:50827409-50827428 None:intergenic 30.0%
! TTTGGTAGCATTTATATGTG+CGG - chr7.2:50828663-50828682 None:intergenic 30.0%
! TTTTCAGTGATGTAGATTCT+TGG - chr7.2:50828472-50828491 None:intergenic 30.0%
!! ATAACTTTGAAACTGTAGCA+TGG - chr7.2:50827269-50827288 None:intergenic 30.0%
!! GATACGTTTGATTTTGACAA+TGG + chr7.2:50829668-50829687 MS.gene23161:CDS 30.0%
!! GGATTAATCTTGGTTCTATT+TGG - chr7.2:50827977-50827996 None:intergenic 30.0%
!! TAACTTTGAAACTGTAGCAT+GGG - chr7.2:50827268-50827287 None:intergenic 30.0%
!! TTCTCATTTGTTGTGAATTC+GGG - chr7.2:50827884-50827903 None:intergenic 30.0%
!!! CATTATTGCAGTTTTGAATG+TGG + chr7.2:50828218-50828237 MS.gene23161:intron 30.0%
!!! CATTCATTAGTTTTTGTGGA+CGG + chr7.2:50825642-50825661 MS.gene23161:intron 30.0%
AACTTGGACATATTTACCGA+TGG - chr7.2:50828902-50828921 None:intergenic 35.0%
AAGTGCAGGATATTCACAAA+AGG - chr7.2:50826858-50826877 None:intergenic 35.0%
AATGTGGAAGGAAAAACTCT+TGG + chr7.2:50828234-50828253 MS.gene23161:CDS 35.0%
ACATGATCCTTTAAATGTGC+AGG + chr7.2:50826825-50826844 MS.gene23161:intron 35.0%
ATAGATGGAACCTTAAAAGG+AGG + chr7.2:50826650-50826669 MS.gene23161:intron 35.0%
ATCAACGAGTTACTCAACAA+TGG + chr7.2:50826710-50826729 MS.gene23161:intron 35.0%
ATGGTGATCGAGTGAAATAT+TGG + chr7.2:50827109-50827128 MS.gene23161:CDS 35.0%
ATGTGATTAGAGTGACCATT+TGG - chr7.2:50826416-50826435 None:intergenic 35.0%
CAAACAAAATGCTAACGGAA+AGG + chr7.2:50826209-50826228 MS.gene23161:intron 35.0%
CCAAGCTATGTATACTTACA+TGG + chr7.2:50827155-50827174 MS.gene23161:CDS 35.0%
CCATGTAAGTATACATAGCT+TGG - chr7.2:50827158-50827177 None:intergenic 35.0%
GAATATTCATTGCTAAACGG+CGG + chr7.2:50828984-50829003 MS.gene23161:intron 35.0%
GATCACCATATGTTTCGAAT+AGG - chr7.2:50827098-50827117 None:intergenic 35.0%
GCTCTTCAACAAAATATTGG+CGG + chr7.2:50826891-50826910 MS.gene23161:intron 35.0%
GTGGAAACTTGATACATACA+TGG + chr7.2:50829006-50829025 MS.gene23161:intron 35.0%
GTGTCCTATAAATTCTTTGG+CGG + chr7.2:50828960-50828979 MS.gene23161:intron 35.0%
GTTATACAAGTCCAAATTCC+AGG + chr7.2:50827284-50827303 MS.gene23161:CDS 35.0%
TAACAGATTTCAAATGGGGA+TGG + chr7.2:50827640-50827659 MS.gene23161:CDS 35.0%
TAAGGTTCCATCTATACAAG+TGG - chr7.2:50826645-50826664 None:intergenic 35.0%
TACTGACAAACACAGCTAAA+TGG + chr7.2:50829747-50829766 MS.gene23161:CDS 35.0%
TCAACAACCACTTGTATAGA+TGG + chr7.2:50826635-50826654 MS.gene23161:intron 35.0%
TCTACATCACTGAAAATGGT+TGG + chr7.2:50828476-50828495 MS.gene23161:intron 35.0%
TTCTCCGCCAAAGAATTTAT+AGG - chr7.2:50828967-50828986 None:intergenic 35.0%
TTTACCTTCTGTAACAGCTA+AGG - chr7.2:50828017-50828036 None:intergenic 35.0%
! ATTTTCATAGTAGTGTGGGA+TGG + chr7.2:50826004-50826023 MS.gene23161:intron 35.0%
! GTTCGTCTTTCAATGGATTT+GGG - chr7.2:50828622-50828641 None:intergenic 35.0%
! TGTTCGTCTTTCAATGGATT+TGG - chr7.2:50828623-50828642 None:intergenic 35.0%
!! AGGTCTAGTTCTATAGCATA+GGG + chr7.2:50826064-50826083 MS.gene23161:intron 35.0%
!! TAGGTCTAGTTCTATAGCAT+AGG + chr7.2:50826063-50826082 MS.gene23161:intron 35.0%
!! TTCGACTGCATTTTAACCAT+CGG + chr7.2:50828883-50828902 MS.gene23161:intron 35.0%
!!! ATTGCAGTTTTGAATGTGGA+AGG + chr7.2:50828222-50828241 MS.gene23161:intron 35.0%
!!! GTTTTAGAGCCATTGTTCAA+CGG + chr7.2:50827815-50827834 MS.gene23161:CDS 35.0%
!!! TTTTAGAGCCATTGTTCAAC+GGG + chr7.2:50827816-50827835 MS.gene23161:CDS 35.0%
ATGTCTTGGAACAACAGTCT+TGG + chr7.2:50825869-50825888 MS.gene23161:intron 40.0%
GAAGGAATTCCTACAAAGAG+AGG - chr7.2:50828590-50828609 None:intergenic 40.0%
GAGCTCCTATTCGAAACATA+TGG + chr7.2:50827090-50827109 MS.gene23161:CDS 40.0%
GTATACATAGCTTGGAGTTC+CGG - chr7.2:50827150-50827169 None:intergenic 40.0%
GTTCGATGTTCGTCTTTCAA+TGG - chr7.2:50828629-50828648 None:intergenic 40.0%
TAAAGGATGCAACTCCTTCA+AGG - chr7.2:50829276-50829295 None:intergenic 40.0%
TCTAGGTTCTTATTCTACGG+AGG + chr7.2:50827182-50827201 MS.gene23161:CDS 40.0%
TTGACATAGGCAGTTCAAGA+GGG + chr7.2:50827537-50827556 MS.gene23161:intron 40.0%
TTGGACTACATTCAATGAGC+CGG + chr7.2:50827128-50827147 MS.gene23161:CDS 40.0%
TTGTGACATCCTCTCTTTGT+AGG + chr7.2:50828578-50828597 MS.gene23161:intron 40.0%
TTTGACATAGGCAGTTCAAG+AGG + chr7.2:50827536-50827555 MS.gene23161:intron 40.0%
! ACGTTCGTGGATATTTTGCA+TGG + chr7.2:50829636-50829655 MS.gene23161:CDS 40.0%
! CGTTCGTGGATATTTTGCAT+GGG + chr7.2:50829637-50829656 MS.gene23161:CDS 40.0%
! GGATTTGGGATTTCGTAAGA+AGG - chr7.2:50828608-50828627 None:intergenic 40.0%
! TTTAGAGCCATTGTTCAACG+GGG + chr7.2:50827817-50827836 MS.gene23161:CDS 40.0%
!! AATGGCTCTAAAACCCTGAA+AGG - chr7.2:50827809-50827828 None:intergenic 40.0%
ATCCTGAGGCTTGGAACTAT+AGG - chr7.2:50827601-50827620 None:intergenic 45.0%
GATGCCTTAGCTGTTACAGA+AGG + chr7.2:50828010-50828029 MS.gene23161:CDS 45.0%
GCAGTTCAAGAGGGAGAAAT+TGG + chr7.2:50827546-50827565 MS.gene23161:CDS 45.0%
GGATAATCCCCGTTGAACAA+TGG - chr7.2:50827827-50827846 None:intergenic 45.0%
TATTCATTGCTAAACGGCGG+TGG + chr7.2:50828987-50829006 MS.gene23161:intron 45.0%
TCCTGAGGCTTGGAACTATA+GGG - chr7.2:50827600-50827619 None:intergenic 45.0%
TGTAACTATGTCTACCCCGA+AGG + chr7.2:50828403-50828422 MS.gene23161:CDS 45.0%
TGTTGGAGCAGAGTAATACC+AGG + chr7.2:50825533-50825552 MS.gene23161:CDS 45.0%
! CTAGTGGATAGTCAAAGTGC+AGG - chr7.2:50826872-50826891 None:intergenic 45.0%
! GCGTTTGATTTCGCCTTTCA+GGG + chr7.2:50827793-50827812 MS.gene23161:intron 45.0%
!! ACTAAAATTATAAATATTAA+AGG - chr7.2:50829293-50829312 None:intergenic 5.0%
!!! AACTTAATTATATTTTTTTT+AGG + chr7.2:50828315-50828334 MS.gene23161:intron 5.0%
!!! ATTTATATATATATTTTCTT+TGG + chr7.2:50827736-50827755 MS.gene23161:intron 5.0%
TAGTTCCAAGCCTCAGGATG+TGG + chr7.2:50827602-50827621 MS.gene23161:CDS 50.0%
TCCCTATAGTTCCAAGCCTC+AGG + chr7.2:50827596-50827615 MS.gene23161:CDS 50.0%
! GGCGTTTGATTTCGCCTTTC+AGG + chr7.2:50827792-50827811 MS.gene23161:intron 50.0%
AGCATCCACATCCTGAGGCT+TGG - chr7.2:50827610-50827629 None:intergenic 55.0%
AGTGACGGCGTAAACGTTCG+TGG + chr7.2:50829623-50829642 MS.gene23161:intron 55.0%
TGAGCAGCATCCACATCCTG+AGG - chr7.2:50827615-50827634 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 50825532 50829805 50825532 ID=MS.gene23161
chr7.2 mRNA 50825532 50829805 50825532 ID=MS.gene23161.t1;Parent=MS.gene23161
chr7.2 exon 50825532 50825554 50825532 ID=MS.gene23161.t1.exon1;Parent=MS.gene23161.t1
chr7.2 CDS 50825532 50825554 50825532 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50827068 50827305 50827068 ID=MS.gene23161.t1.exon2;Parent=MS.gene23161.t1
chr7.2 CDS 50827068 50827305 50827068 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50827546 50827661 50827546 ID=MS.gene23161.t1.exon3;Parent=MS.gene23161.t1
chr7.2 CDS 50827546 50827661 50827546 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50827814 50828031 50827814 ID=MS.gene23161.t1.exon4;Parent=MS.gene23161.t1
chr7.2 CDS 50827814 50828031 50827814 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50828229 50828263 50828229 ID=MS.gene23161.t1.exon5;Parent=MS.gene23161.t1
chr7.2 CDS 50828229 50828263 50828229 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50828391 50828493 50828391 ID=MS.gene23161.t1.exon6;Parent=MS.gene23161.t1
chr7.2 CDS 50828391 50828493 50828391 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50828600 50828693 50828600 ID=MS.gene23161.t1.exon7;Parent=MS.gene23161.t1
chr7.2 CDS 50828600 50828693 50828600 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
chr7.2 exon 50829625 50829805 50829625 ID=MS.gene23161.t1.exon8;Parent=MS.gene23161.t1
chr7.2 CDS 50829625 50829805 50829625 ID=cds.MS.gene23161.t1;Parent=MS.gene23161.t1
Gene Sequence

>MS.gene23161

ATGTTGGAGCAGAGTAATACCAGGTAAAACTTTTGAACTAACAAACTCTAATATAATATCTACTTATAGTATCCAAAGAGTAACTTATTAATTCAGGGAATGCTAGAGTACATTCATTAGTTTTTGTGGACGGAAATCATAGTAAACTGATATTTAGCGATAACTAGATAATGTTTTATTTCTAAAAATTAGCAGGTTTATGGTAGTTATATAAGAACAAGCATTTCCCTAATGAAGAGAAAAAAAATTATGAATAATATATTTCTTTACATAAAGATGGTTGATGGTAGTGTTTATTGCTAAGATTCTTGAACTTTATTTTCTTTAATCTACTGGTATGTCTTGGAACAACAGTCTTGGTATATATGATTGACTATTAGTTTCTTTGTCTTTCTTAGAGTAGGAAGTCATGTGACCAAATATAACATTCAATGTTGGAAAACTTTTCCTAAATTTGTTGTACAACTACTACATTTTCATAGTAGTGTGGGATGGCATATTTTATTTTCAGATATCACTTTCCTTTCTATTTAGGTCTAGTTCTATAGCATAGGGAAGAAATGATAGATGAACAAAACACTAGATCTATAATTTGGGGAAGATTTAAAGACAAAGTTCTAGAGTCATTCACCTAATAAGCATAAATATAGGACATACAAGAAAAAAATTGAGTTAGTCAAACAAAATGCTAACGGAAAGGACTAAAATATCAAAAAGTTTTTAAGTTAAGGGATAAAATGAAACAAAGAATACTTGAGAAACCAAGTGAAACCTAAAAATAAGTTTAAGGAATAAAATTATAATTTATCATTTTTAATGTATAGAATTTTATATATCGTATATAATTATATGGATATTCAGAGGAAATATAAAGAGTTGTACCAAATGGTCACTCTAATCACATCTCACTATGTTGACCTCTTCAACAAAAAAAAAACTCTCACTATGCTGATGTTTGTTTTATCAAATGATATGACATAGAACATGCAACAACTTATATTGTCGATAAATATTCGTTAAACTATATTTCACATGGACAAGCAATGATAATACTATATCCTTTCTTGCAATATATAATAATATACTTATCTTTATATTTATATTCAACAACCACTTGTATAGATGGAACCTTAAAAGGAGGTATAAACAAAGAAGGTATCGACTTCTACAACAATTTGATCAACGAGTTACTCAACAATGGTATGAATAGAAAAATCCAATATTTATTGCAATAATTAGATTCGACAAGAAGTGTGTTTAAAATACATGCAATAATTTTTATTTTCTTGATTTACATGATCCTTTAAATGTGCAGGTATTGAACCTTTTGTGAATATCCTGCACTTTGACTATCCACTAGCTCTTCAACAAAATATTGGCGGCTTCTTAAATCGCTCCATTGTGTAAATTCACTTGAATATAATTTCATCAAAACATTTATTGTCCATAAATTGATTCAACCTTAAATTAGTCTCACAAAAATTATTGAATTTATTCATGCATGCTTATATTGTTTATGTTAAAATCAAATTTTAGGAAACATTTCAAGGATTATAGTGAGCTCCTATTCGAAACATATGGTGATCGAGTGAAATATTGGACTACATTCAATGAGCCGGAACTCCAAGCTATGTATACTTACATGGGAAATCTAGGTTCTTATTCTACGGAGGACTGTGCAACTACTAAAGTTTGTACAGAAATATATACTGCACTTCATAACTTACTCATATCCCATGCTACAGTTTCAAAGTTATACAAGTCCAAATTCCAGGTAAGACATATTTTGAAAATTGCATGTTACATGTATGGTATCAAAAATATATATATATAAAGATTGAGATTCACAACAACATGACTAAAGGGAGTATAATCCCCGATTAACGTAATAGCAATAATAATTTTGACACTAATTTTAATAATTATCAACATTAATCAAACTAGTTTATAAAATAAGTTGAATTTTAGAGAAAAAAATAAAATATTGTCGTTTTCCATTAAATATTTGACATAGGCAGTTCAAGAGGGAGAAATTGGAATTGCTATTTCTACAAAATCATATGTTCCCTATAGTTCCAAGCCTCAGGATGTGGATGCTGCTCAAAGACTAACAGATTTCAAATGGGGATGGTTAGTGCTTTTTAGTTACACCATAAACCACTCATATTTTGTGTTTTATAAGTCGTTCAATCATTTTCTTCTTGATTTATATATATATTTTCTTTGGTTAATAAATTTGCATATCAAATTTTTATCTTGCGGCGTTTGATTTCGCCTTTCAGGGTTTTAGAGCCATTGTTCAACGGGGATTATCCAAAAATAATGAGAAAACTAGTGGGGAAAAGACTACCCGAATTCACAACAAATGAGAAAGAAATGTTGAAAGGAAGTACAGACTTTATTGGGATCAATTACTATTACTCTCTCTTTGTTAGACATGAACCAAATAGAACCAAGATTAATCCTATTGACAATTTTGATGCCTTAGCTGTTACAGAAGGTAAATTTATAATCAAATTAATTCCATTCTATTTTTAAAATAATTGGTATACAAAGGCATCACTATGAAAAAGTACCATTGAAATTGACACCATAAACTCTATGAATTAAATTCTACTTCTTAAATATGTAAGAGAATTACAAAGAATTAAAATAACTAATGTTGACTAATGCATTGTTATTCTTTCATTATTGCAGTTTTGAATGTGGAAGGAAAAACTCTTGGTTACTATGTGAGTAAATAATGATACAAAATTATAAAGAATGATATTTTTTAGGGGGATAACTTAATTATATTTTTTTTAGGAAATAACTTAATTATTATAATTTTATCTTTTGTTCACTTTTAATAATTTGTAGGACCAATATGGTTGTAACTATGTCTACCCCGAAGGATTATATAATGTCTTGCTCTACATTAACAAAGAGTATAAAAATCCAAGAATCTACATCACTGAAAATGGTTGGTTTTCATTTGATCACATTTACATCATCATAACTAAACTATCTATAATTTATGCAATTAAAAGAGATCATTACTTTTTTTTTGTGACATCCTCTCTTTGTAGGAATTCCTTCTTACGAAATCCCAAATCCATTGAAAGACGAACATCGAACTGCTTACATCGCCGCACATATAAATGCTACCAAAGCAGCAATTAAGTAAGTTATTTTTTCCACATCTTTAGAATTTGGAAAGTTAATATCTAATTTTTATTTTCTAAGGTATATTTATTATGTAGTGTGTCTATTGCAAAGATGTATAATATATTATTTATCAACTAATGTAGAGTTAATCAAAAAATTCAAAAATTATTAACTAGATTTTCTCGGTTATTTAAAACGAATATGTTCGACTGCATTTTAACCATCGGTAAATATGTCCAAGTTGTACATAAACTCAAATCAGAAGGGAGAATCCATCTTGTGTGTCCTATAAATTCTTTGGCGGAGAATATTCATTGCTAAACGGCGGTGGAAACTTGATACATACATGGTAACTGAAAAAAAAAATGAAATTATAACAAGTTAAATTAAAGTAGAGTTTAATGACTTCACACAGATAATATAAAACTTTATATGCATTCATTTAATCATCTTATATATATATATATATATATATATATATATATATATATATATATATATATATAGTTTAGAATGCGATATAAGAATCTATAGAGCATAAATTTCAATCTCTCCCTAATCATCATTGTTTTTACACAAATATTGTATTGTTCACCTTGAAGGAGTTGCATCCTTTAATATTTATAATTTTAGTTCAAAAAAATATATATATATATATATATAGTTTAGAATGTGATATAAGAATCATTAGAGCATAAATTTCAATCTCTTCCTAATCATCATTGTTTTTACATAAATATTGTATTGTTCACTTTGAAGGAGTTGCATCCCTTAAGATTTGTAATTTTTGTTCAAAATATATGTAATATCAAAAGGCAACAAATTCAAAGTTATGAAACAATGAAACATTAGTATGATAGGCAGATTATTGTGAAATGACATGCTTTTATAACTTAGTTTCCACAAGAAACTGATCTTTAATGCAATTATGTTTTTACATTGATAGTGACGGCGTAAACGTTCGTGGATATTTTGCATGGGCAGCATTTGATACGTTTGATTTTGACAATGGATATTCTAAACATATGGGGCTTTATCATGTCGATTTTGATGATAGTCTCAAACGTATACTGACAAACACAGCTAAATGGTACAAAAAGTATTTGACACTTGATTCGGTACACTAA
Protein sequence

>MS.gene23161.t1

MLEQSNTRKHFKDYSELLFETYGDRVKYWTTFNEPELQAMYTYMGNLGSYSTEDCATTKVCTEIYTALHNLLISHATVSKLYKSKFQAVQEGEIGIAISTKSYVPYSSKPQDVDAAQRLTDFKWGWVLEPLFNGDYPKIMRKLVGKRLPEFTTNEKEMLKGSTDFIGINYYYSLFVRHEPNRTKINPIDNFDALAVTEVLNVEGKTLGYYDQYGCNYVYPEGLYNVLLYINKEYKNPRIYITENGIPSYEIPNPLKDEHRTAYIAAHINATKAAINDGVNVRGYFAWAAFDTFDFDNGYSKHMGLYHVDFDDSLKRILTNTAKWYKKYLTLDSVH