Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23279.t1 | XP_003606943.1 | 96.4 | 528 | 19 | 0 | 1 | 528 | 1 | 528 | 2.90E-297 | 1030.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23279.t1 | Q00081 | 77.8 | 469 | 104 | 0 | 60 | 528 | 2 | 470 | 3.8e-221 | 768.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23279.t1 | G7JHD0 | 96.4 | 528 | 19 | 0 | 1 | 528 | 1 | 528 | 2.1e-297 | 1030.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057304 | MS.gene23279 | 0.996289 | 1.17E-225 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23279.t1 | MTR_4g070430 | 96.402 | 528 | 19 | 0 | 1 | 528 | 1 | 528 | 0.0 | 1055 |
| MS.gene23279.t1 | MTR_4g070430 | 96.211 | 475 | 18 | 0 | 1 | 475 | 1 | 475 | 0.0 | 951 |
| MS.gene23279.t1 | MTR_3g116860 | 79.924 | 528 | 96 | 2 | 1 | 528 | 1 | 518 | 0.0 | 860 |
| MS.gene23279.t1 | MTR_3g112070 | 69.048 | 504 | 145 | 4 | 29 | 528 | 34 | 530 | 0.0 | 710 |
| MS.gene23279.t1 | MTR_4g131760 | 64.655 | 464 | 160 | 2 | 66 | 528 | 61 | 521 | 0.0 | 654 |
| MS.gene23279.t1 | MTR_7g111020 | 67.038 | 449 | 147 | 1 | 81 | 528 | 80 | 528 | 0.0 | 643 |
| MS.gene23279.t1 | MTR_7g111020 | 67.424 | 396 | 128 | 1 | 134 | 528 | 1 | 396 | 0.0 | 568 |
| MS.gene23279.t1 | MTR_3g082150 | 53.066 | 424 | 191 | 5 | 108 | 528 | 96 | 514 | 1.79e-163 | 474 |
| MS.gene23279.t1 | MTR_5g097010 | 52.594 | 424 | 193 | 5 | 108 | 528 | 97 | 515 | 6.26e-162 | 470 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23279.t1 | AT4G39210 | 70.833 | 528 | 146 | 3 | 2 | 528 | 1 | 521 | 0.0 | 783 |
| MS.gene23279.t1 | AT4G39210 | 70.833 | 528 | 146 | 3 | 2 | 528 | 1 | 521 | 0.0 | 783 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene23279.t1 | AT1G27680 | 67.793 | 503 | 158 | 2 | 23 | 524 | 15 | 514 | 0.0 | 715 |
| MS.gene23279.t1 | AT5G19220 | 61.856 | 485 | 184 | 1 | 44 | 528 | 39 | 522 | 0.0 | 652 |
| MS.gene23279.t1 | AT5G48300 | 53.538 | 424 | 189 | 5 | 108 | 528 | 102 | 520 | 3.41e-164 | 476 |
| MS.gene23279.t1 | AT1G05610 | 40.950 | 442 | 236 | 10 | 94 | 528 | 53 | 476 | 1.84e-109 | 335 |
| MS.gene23279.t1 | AT1G05610 | 40.674 | 445 | 239 | 10 | 94 | 528 | 53 | 482 | 3.26e-109 | 334 |
Find 117 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGCTCGCACCTATTT+TGG | 0.081433 | 4.3:+35043924 | MS.gene23279:CDS |
| CAAATTTGCTATATGGTTAT+TGG | 0.165827 | 4.3:-35042958 | None:intergenic |
| ATTCTCAATGTTAGTGTTCT+TGG | 0.168119 | 4.3:-35044296 | None:intergenic |
| GTGTCAACTTCAGACCTTTC+AGG | 0.205906 | 4.3:+35043581 | MS.gene23279:intron |
| GTTGATGCCATTTCCAAAAT+AGG | 0.213388 | 4.3:-35043937 | None:intergenic |
| GTCTTCTTGTGTGAACTTTA+AGG | 0.214379 | 4.3:+35042935 | MS.gene23279:CDS |
| CTTTCCTCAAATTTGCTATA+TGG | 0.245307 | 4.3:-35042965 | None:intergenic |
| GTCACCATATATTGCATCTA+TGG | 0.271084 | 4.3:+35045118 | MS.gene23279:CDS |
| GGCCTTCTTAACCCTCTCTT+TGG | 0.286759 | 4.3:-35043090 | None:intergenic |
| AAATGTTGCTTCCATTGTAT+TGG | 0.295734 | 4.3:+35043638 | MS.gene23279:CDS |
| TGCTAGCTCAGAAGCAATTT+CGG | 0.314259 | 4.3:-35046107 | None:intergenic |
| AGCAGGTGTAGCAGCTCTTT+TGG | 0.314559 | 4.3:-35043694 | None:intergenic |
| AATGTTGCTTCCATTGTATT+GGG | 0.317534 | 4.3:+35043639 | MS.gene23279:CDS |
| GAACGTTCACGTTTGGATTA+CGG | 0.324212 | 4.3:+35045789 | MS.gene23279:CDS |
| TTCAGTCGTGCATCGGATTA+CGG | 0.329466 | 4.3:+35044639 | MS.gene23279:intron |
| TGTCAAACCAAGATGCATTA+AGG | 0.343976 | 4.3:+35045096 | MS.gene23279:CDS |
| CTCAGAAGCAATTTCGGATT+CGG | 0.345496 | 4.3:-35046101 | None:intergenic |
| TTTGTTGGTGGTAAGAATCT+TGG | 0.351797 | 4.3:-35045589 | None:intergenic |
| CTGTTACTTCCAATCCCAAT+AGG | 0.370914 | 4.3:-35046142 | None:intergenic |
| GCACAGGGAAAGGTTCCTAT+TGG | 0.371034 | 4.3:+35046127 | MS.gene23279:CDS |
| GAATCTTGGAGATGTGAAAA+TGG | 0.376696 | 4.3:-35045575 | None:intergenic |
| CTGCATTTATCAATCTTTGT+TGG | 0.377402 | 4.3:-35045604 | None:intergenic |
| TACCTGTTGGTGGGTGCTAT+AGG | 0.383651 | 4.3:+35043811 | MS.gene23279:CDS |
| TGTGGGTGAACGTTCACGTT+TGG | 0.391042 | 4.3:+35045782 | MS.gene23279:CDS |
| TTTGGAAATGGCATCAACTT+TGG | 0.391193 | 4.3:+35043942 | MS.gene23279:CDS |
| ACTCCCATAGATGCAATATA+TGG | 0.392783 | 4.3:-35045122 | None:intergenic |
| GATTTCAGATCCAAAGTCAT+TGG | 0.397964 | 4.3:-35045201 | None:intergenic |
| CGGATGTAAAATCCATCTTC+TGG | 0.403798 | 4.3:-35046513 | None:intergenic |
| AGCAGACACAACACCAGGTT+TGG | 0.410213 | 4.3:-35043111 | None:intergenic |
| CATTGAGAATGTAATAATCT+TGG | 0.411542 | 4.3:+35044309 | MS.gene23279:CDS |
| ACTCAAACGCCAGGAGAAGC+TGG | 0.413697 | 4.3:+35044211 | MS.gene23279:CDS |
| ATTGTATTGGGAGGAGGTCC+TGG | 0.415190 | 4.3:+35043651 | MS.gene23279:CDS |
| CACAGGGAAAGGTTCCTATT+GGG | 0.422057 | 4.3:+35046128 | MS.gene23279:CDS |
| GGATTACGGTGTTGAGCTCC+AGG | 0.426885 | 4.3:+35045803 | MS.gene23279:CDS |
| AATCATTCCTGCATCTGTTA+AGG | 0.427773 | 4.3:+35045220 | MS.gene23279:CDS |
| GCAATTTACATGGGTATTTG+AGG | 0.429868 | 4.3:+35044270 | MS.gene23279:CDS |
| AGCCTATAGCACCCACCAAC+AGG | 0.430792 | 4.3:-35043813 | None:intergenic |
| AAATGATGCCGTTGAGACTA+AGG | 0.434380 | 4.3:+35043145 | MS.gene23279:CDS |
| AAGCAATTTCGGATTCGGTT+TGG | 0.438840 | 4.3:-35046096 | None:intergenic |
| TCCTTGGATGATTAATCAGT+TGG | 0.439153 | 4.3:+35043052 | MS.gene23279:CDS |
| ATGGTGACCTTAATGCATCT+TGG | 0.439664 | 4.3:-35045103 | None:intergenic |
| TTTACAGGACACTGTAATGA+TGG | 0.445727 | 4.3:+35046060 | MS.gene23279:intron |
| GGAAAGGTTCCTATTGGGAT+TGG | 0.456229 | 4.3:+35046133 | MS.gene23279:CDS |
| ATTGACAAGAATGCCAGGAT+TGG | 0.456643 | 4.3:+35046309 | MS.gene23279:CDS |
| CTGTTGATACAGTTGCTCAT+TGG | 0.456942 | 4.3:-35043846 | None:intergenic |
| GCTTCCATTGTATTGGGAGG+AGG | 0.457513 | 4.3:+35043645 | MS.gene23279:CDS |
| AGATCCAAAGTCATTGGATG+TGG | 0.463757 | 4.3:-35045195 | None:intergenic |
| CAACAAAGATTGATAAATGC+AGG | 0.467155 | 4.3:+35045605 | MS.gene23279:CDS |
| TTGCATTCCTTAACAGATGC+AGG | 0.468552 | 4.3:-35045227 | None:intergenic |
| TTGACAAGAATGCCAGGATT+GGG | 0.469631 | 4.3:+35046310 | MS.gene23279:CDS |
| GATTTAAGATCAGCACCCTT+AGG | 0.470111 | 4.3:-35044711 | None:intergenic |
| TTGGAAGTAACAGCAAAATC+AGG | 0.473432 | 4.3:+35046152 | MS.gene23279:CDS |
| ATCAGGAATCACAATTGTAA+TGG | 0.475871 | 4.3:+35046536 | MS.gene23279:CDS |
| CATTTATCAATCTTTGTTGG+TGG | 0.476162 | 4.3:-35045601 | None:intergenic |
| GGGTGCTGATCTTAAATCAA+TGG | 0.482192 | 4.3:+35044716 | MS.gene23279:CDS |
| AACCAAAGAGAGGGTTAAGA+AGG | 0.486759 | 4.3:+35043088 | MS.gene23279:CDS |
| GTTGTACACTACATTCTCTA+AGG | 0.489282 | 4.3:-35045752 | None:intergenic |
| TATCCCACATCCAATGACTT+TGG | 0.491448 | 4.3:+35045191 | MS.gene23279:CDS |
| ATGCTGTGAGGCAATTTACA+TGG | 0.492795 | 4.3:+35044260 | MS.gene23279:CDS |
| ATAACCATATAGCAAATTTG+AGG | 0.496126 | 4.3:+35042961 | MS.gene23279:CDS |
| GGGGTGTGAATTATAGTCCT+TGG | 0.503061 | 4.3:+35043036 | MS.gene23279:CDS |
| GATGTGAAAATGGGTGTCTT+GGG | 0.504166 | 4.3:-35045565 | None:intergenic |
| AGATGTGAAAATGGGTGTCT+TGG | 0.510373 | 4.3:-35045566 | None:intergenic |
| CATGTGCTGCTGTTGGTGAC+AGG | 0.513782 | 4.3:+35044501 | MS.gene23279:CDS |
| GATGACATCTTTCCCAATCC+TGG | 0.514030 | 4.3:-35046322 | None:intergenic |
| CCTTGGATGATTAATCAGTT+GGG | 0.517935 | 4.3:+35043053 | MS.gene23279:CDS |
| AATCTTGGAGATGTGAAAAT+GGG | 0.520261 | 4.3:-35045574 | None:intergenic |
| TTTCTTGGTGAGAGAATCAA+AGG | 0.520401 | 4.3:+35043014 | MS.gene23279:CDS |
| TTGGCGGCTACTCAAACGCC+AGG | 0.530303 | 4.3:+35044202 | MS.gene23279:CDS |
| GAAGCAGATAGACCAGAAGA+TGG | 0.532366 | 4.3:+35046501 | MS.gene23279:CDS |
| AATTGCTTCTGAGCTAGCAC+AGG | 0.540855 | 4.3:+35046111 | MS.gene23279:CDS |
| TCACCATATATTGCATCTAT+GGG | 0.541411 | 4.3:+35045119 | MS.gene23279:CDS |
| AATGGCATCAACTTTGGAGA+TGG | 0.542455 | 4.3:+35043948 | MS.gene23279:CDS |
| GGACTACATGGACCTTGTGC+AGG | 0.543873 | 4.3:+35044354 | MS.gene23279:CDS |
| TACTCAAGCTTCTAAAATGG+AGG | 0.545196 | 4.3:+35045168 | MS.gene23279:CDS |
| GGATCATAAAATTTGAACAA+TGG | 0.546619 | 4.3:-35045544 | None:intergenic |
| TCTATACAGAATGGACTACA+TGG | 0.550347 | 4.3:+35044342 | MS.gene23279:CDS |
| GGAGACTATTGGGAAGACAT+TGG | 0.550910 | 4.3:+35045375 | MS.gene23279:CDS |
| CTCAAACGCCAGGAGAAGCT+GGG | 0.551829 | 4.3:+35044212 | MS.gene23279:CDS |
| GTATAATTGACAAGAATGCC+AGG | 0.558591 | 4.3:+35046304 | MS.gene23279:CDS |
| TTCTGAGCTAGCACAGGGAA+AGG | 0.561514 | 4.3:+35046117 | MS.gene23279:CDS |
| CATAAATGATGGAACCTGAA+AGG | 0.567480 | 4.3:-35043595 | None:intergenic |
| AATGGAGAAAGCGACAATAG+AGG | 0.575600 | 4.3:+35046554 | MS.gene23279:CDS |
| AGGGTTAAGAAGGCCAAACC+TGG | 0.576523 | 4.3:+35043098 | MS.gene23279:CDS |
| TTACAGGACACTGTAATGAT+GGG | 0.576561 | 4.3:+35046061 | MS.gene23279:intron |
| CCCAACTGATTAATCATCCA+AGG | 0.580151 | 4.3:-35043053 | None:intergenic |
| TTACAATTGTGATTCCTGAT+CGG | 0.588358 | 4.3:-35046533 | None:intergenic |
| GAGAATGTAATAATCTTGGC+TGG | 0.593829 | 4.3:+35044313 | MS.gene23279:CDS |
| AGTGTACAACACTCCATTGT+GGG | 0.594262 | 4.3:+35045765 | MS.gene23279:CDS |
| CAACTTTGGAGATGGATATG+TGG | 0.599466 | 4.3:+35043956 | MS.gene23279:CDS |
| ACAGTATCATGTGCTGCTGT+TGG | 0.599712 | 4.3:+35044494 | MS.gene23279:CDS |
| TAATATGGCTCTTACTGAAG+AGG | 0.599834 | 4.3:+35045422 | MS.gene23279:CDS |
| ACGTGAACGTTCACCCACAA+TGG | 0.600506 | 4.3:-35045778 | None:intergenic |
| AACAAAGATTGATAAATGCA+GGG | 0.604087 | 4.3:+35045606 | MS.gene23279:CDS |
| TCAGCTTACCTTAGTCTCAA+CGG | 0.607553 | 4.3:-35043153 | None:intergenic |
| GTTGCTTCCATTGTATTGGG+AGG | 0.607715 | 4.3:+35043642 | MS.gene23279:CDS |
| TAAGTTTGAGAACCAAAGAG+AGG | 0.613319 | 4.3:+35043078 | MS.gene23279:CDS |
| TGGTGATCATCTATACAGAA+TGG | 0.614075 | 4.3:+35044333 | MS.gene23279:CDS |
| TTCTTGGTGAGAGAATCAAA+GGG | 0.614967 | 4.3:+35043015 | MS.gene23279:CDS |
| AGGACCTCCTCCCAATACAA+TGG | 0.628390 | 4.3:-35043649 | None:intergenic |
| GATCCAAAGTCATTGGATGT+GGG | 0.628997 | 4.3:-35045194 | None:intergenic |
| AGAACAGCAGACACAACACC+AGG | 0.631071 | 4.3:-35043116 | None:intergenic |
| TGCTGTGAGGCAATTTACAT+GGG | 0.632280 | 4.3:+35044261 | MS.gene23279:CDS |
| AAGTTTGAGAACCAAAGAGA+GGG | 0.633814 | 4.3:+35043079 | MS.gene23279:CDS |
| CTTTGGAGATGGATATGTGG+AGG | 0.648283 | 4.3:+35043959 | MS.gene23279:CDS |
| ATCGGATTACGGATTAGTCA+AGG | 0.648959 | 4.3:+35044650 | MS.gene23279:CDS |
| AATAGGTGCGAGCAATGTGA+CGG | 0.649705 | 4.3:-35043920 | None:intergenic |
| TTAGTCAAGGTAGATAGCAG+AGG | 0.651808 | 4.3:+35044663 | MS.gene23279:CDS |
| GTGGATGCAATAATCTCGCA+TGG | 0.664341 | 4.3:+35045723 | MS.gene23279:CDS |
| TAGTGTACAACACTCCATTG+TGG | 0.667376 | 4.3:+35045764 | MS.gene23279:CDS |
| ATTGCTTCTGAGCTAGCACA+GGG | 0.674782 | 4.3:+35046112 | MS.gene23279:CDS |
| AAATTGGTTTCAAGGAACAG+CGG | 0.676116 | 4.3:+35044237 | MS.gene23279:CDS |
| CTTGGTGAGAGAATCAAAGG+GGG | 0.681586 | 4.3:+35043017 | MS.gene23279:CDS |
| AAGGAACAGCGGATGCTGTG+AGG | 0.682609 | 4.3:+35044248 | MS.gene23279:CDS |
| AATCATTGAATACCTGCACA+AGG | 0.693249 | 4.3:-35044366 | None:intergenic |
| ATGAGCAACTGTATCAACAG+TGG | 0.701758 | 4.3:+35043849 | MS.gene23279:CDS |
| TCTTGGTGAGAGAATCAAAG+GGG | 0.719796 | 4.3:+35043016 | MS.gene23279:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTATGATCAAATT+AGG | - | chr4.3:35045004-35045023 | None:intergenic | 10.0% |
| !! | ATAAAAAAGGAAAAATTTAA+AGG | - | chr4.3:35044544-35044563 | None:intergenic | 10.0% |
| !! | CAAAAAAACATATATAAAAA+AGG | - | chr4.3:35044557-35044576 | None:intergenic | 10.0% |
| !!! | AAAATTTTGTTTTAAATGTT+AGG | - | chr4.3:35046043-35046062 | None:intergenic | 10.0% |
| !! | AAAAGAAATATAAGGTAAAA+GGG | - | chr4.3:35046376-35046395 | None:intergenic | 15.0% |
| !! | TAAAAGAAATATAAGGTAAA+AGG | - | chr4.3:35046377-35046396 | None:intergenic | 15.0% |
| !! | TCAAATGTAAAAGAAATATA+AGG | - | chr4.3:35046384-35046403 | None:intergenic | 15.0% |
| !!! | AAAAAATATTTTAACGCTTA+TGG | + | chr4.3:35043462-35043481 | MS.gene23279:intron | 15.0% |
| !!! | AATATTTTTCATCATGATAA+TGG | + | chr4.3:35042990-35043009 | MS.gene23279:CDS | 15.0% |
| !!! | CATAATATATTTATCTTTTC+TGG | + | chr4.3:35045012-35045031 | MS.gene23279:intron | 15.0% |
| !!! | CATTTAAAACAAAATTTTAC+AGG | + | chr4.3:35046045-35046064 | MS.gene23279:intron | 15.0% |
| !! | AAAAAAAATGCCTGAAAAAA+AGG | - | chr4.3:35045354-35045373 | None:intergenic | 20.0% |
| !! | AAAGAAATATAAGGTAAAAG+GGG | - | chr4.3:35046375-35046394 | None:intergenic | 20.0% |
| !! | AAATTTAGCTACATAATATC+AGG | - | chr4.3:35043518-35043537 | None:intergenic | 20.0% |
| !! | TACCAAAAAAAAACTTAAGA+GGG | + | chr4.3:35044930-35044949 | MS.gene23279:intron | 20.0% |
| !! | TTAACGAAATGTATTTGAAA+GGG | + | chr4.3:35044868-35044887 | MS.gene23279:intron | 20.0% |
| !! | TTACCAAAAAAAAACTTAAG+AGG | + | chr4.3:35044929-35044948 | MS.gene23279:intron | 20.0% |
| !! | TTGAACTTTCATAAATGTAT+AGG | - | chr4.3:35044747-35044766 | None:intergenic | 20.0% |
| !! | TTTAACGAAATGTATTTGAA+AGG | + | chr4.3:35044867-35044886 | MS.gene23279:intron | 20.0% |
| !! | TTTCATTATGTAATGTTACA+TGG | + | chr4.3:35043768-35043787 | MS.gene23279:intron | 20.0% |
| !!! | AATAATGTTAGTTTCATGAT+AGG | - | chr4.3:35045503-35045522 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTTTTTTGGTAAC+AGG | - | chr4.3:35044928-35044947 | None:intergenic | 20.0% |
| !!! | TTTTTTCAGGCATTTTTTTT+CGG | + | chr4.3:35045354-35045373 | MS.gene23279:intron | 20.0% |
| ! | AAAACAGTCTAACACTTTAA+AGG | - | chr4.3:35045281-35045300 | None:intergenic | 25.0% |
| ! | AAAACTTAAGAGGGTTATTA+TGG | + | chr4.3:35044939-35044958 | MS.gene23279:intron | 25.0% |
| ! | AAATGTATTTGAAAGGGTAA+CGG | + | chr4.3:35044874-35044893 | MS.gene23279:intron | 25.0% |
| ! | AACAAAGATTGATAAATGCA+GGG | + | chr4.3:35045606-35045625 | MS.gene23279:CDS | 25.0% |
| ! | AGAAAACACTGAAAATGAAA+TGG | - | chr4.3:35044423-35044442 | None:intergenic | 25.0% |
| ! | ATAACCATATAGCAAATTTG+AGG | + | chr4.3:35042961-35042980 | MS.gene23279:CDS | 25.0% |
| ! | ATCTTCATTACGTGAAAAAA+CGG | - | chr4.3:35044830-35044849 | None:intergenic | 25.0% |
| ! | ATGAATGTTCAATATTCTAC+AGG | - | chr4.3:35046247-35046266 | None:intergenic | 25.0% |
| ! | ATTAGGCAAAATACATTATG+CGG | - | chr4.3:35044987-35045006 | None:intergenic | 25.0% |
| ! | CATTGAGAATGTAATAATCT+TGG | + | chr4.3:35044309-35044328 | MS.gene23279:CDS | 25.0% |
| ! | CTTCAAAATCCTTTATATTG+CGG | + | chr4.3:35043303-35043322 | MS.gene23279:intron | 25.0% |
| ! | GGATCATAAAATTTGAACAA+TGG | - | chr4.3:35045547-35045566 | None:intergenic | 25.0% |
| ! | TATAAAGTAGCTTTCACATT+AGG | - | chr4.3:35044080-35044099 | None:intergenic | 25.0% |
| ! | TGATTCTTATGTTCTTATTG+TGG | + | chr4.3:35043559-35043578 | MS.gene23279:intron | 25.0% |
| !! | AAATCAAACACAATAGGTTT+TGG | + | chr4.3:35044183-35044202 | MS.gene23279:intron | 25.0% |
| !! | ATCATTTTACGATGCTAATA+TGG | + | chr4.3:35045407-35045426 | MS.gene23279:CDS | 25.0% |
| !! | GCTTTTATTCTCATAAATGA+TGG | - | chr4.3:35043609-35043628 | None:intergenic | 25.0% |
| !! | TGGTATTGTTTACATTTTTC+AGG | + | chr4.3:35043788-35043807 | MS.gene23279:intron | 25.0% |
| !! | TTTTCATAATTACTCCTTTG+TGG | + | chr4.3:35045297-35045316 | MS.gene23279:intron | 25.0% |
| !!! | AACCCTCTTAAGTTTTTTTT+TGG | - | chr4.3:35044935-35044954 | None:intergenic | 25.0% |
| !!! | ATTCAAATGCTTTGTTTGTA+GGG | + | chr4.3:35046471-35046490 | MS.gene23279:intron | 25.0% |
| !!! | ATTTTTTTTCGGAGACTATT+GGG | + | chr4.3:35045365-35045384 | MS.gene23279:CDS | 25.0% |
| !!! | CAAATTTGCTATATGGTTAT+TGG | - | chr4.3:35042961-35042980 | None:intergenic | 25.0% |
| !!! | TATAAAGGATTTTGAAGTCT+CGG | - | chr4.3:35043300-35043319 | None:intergenic | 25.0% |
| !!! | TTTTACTCAAGCTTCTAAAA+TGG | + | chr4.3:35045165-35045184 | MS.gene23279:CDS | 25.0% |
| AAAACCACCAACTAACAAAA+TGG | - | chr4.3:35046409-35046428 | None:intergenic | 30.0% | |
| AAATTATGGCCGCAATATAA+AGG | - | chr4.3:35043315-35043334 | None:intergenic | 30.0% | |
| AATATCAGGAACAAAGTCTT+CGG | - | chr4.3:35043504-35043523 | None:intergenic | 30.0% | |
| AATCTTGGAGATGTGAAAAT+GGG | - | chr4.3:35045577-35045596 | None:intergenic | 30.0% | |
| AGAAATTATGGTAGTTTACC+TGG | - | chr4.3:35045824-35045843 | None:intergenic | 30.0% | |
| ATCAGGAATCACAATTGTAA+TGG | + | chr4.3:35046536-35046555 | MS.gene23279:CDS | 30.0% | |
| ATCTTAATTCAAAACCACGA+CGG | - | chr4.3:35043194-35043213 | None:intergenic | 30.0% | |
| ATTCTCAATGTTAGTGTTCT+TGG | - | chr4.3:35044299-35044318 | None:intergenic | 30.0% | |
| CAACAAAGATTGATAAATGC+AGG | + | chr4.3:35045605-35045624 | MS.gene23279:CDS | 30.0% | |
| CATTTATCAATCTTTGTTGG+TGG | - | chr4.3:35045604-35045623 | None:intergenic | 30.0% | |
| CGAAATCAATAATGTCATGA+TGG | + | chr4.3:35044129-35044148 | MS.gene23279:intron | 30.0% | |
| CTGCATTTATCAATCTTTGT+TGG | - | chr4.3:35045607-35045626 | None:intergenic | 30.0% | |
| GCAATTAATGATTGACATTG+TGG | + | chr4.3:35045890-35045909 | MS.gene23279:intron | 30.0% | |
| GGTAAACTACCATAATTTCT+TGG | + | chr4.3:35045824-35045843 | MS.gene23279:intron | 30.0% | |
| GTTCAATATTCTACAGGTTA+TGG | - | chr4.3:35046241-35046260 | None:intergenic | 30.0% | |
| TCACCATATATTGCATCTAT+GGG | + | chr4.3:35045119-35045138 | MS.gene23279:CDS | 30.0% | |
| TCAGCTATAGTGGTAAAAAA+TGG | - | chr4.3:35043370-35043389 | None:intergenic | 30.0% | |
| TTACAATTGTGATTCCTGAT+CGG | - | chr4.3:35046536-35046555 | None:intergenic | 30.0% | |
| TTGATTTCGTTTCAAAACGT+TGG | - | chr4.3:35044118-35044137 | None:intergenic | 30.0% | |
| TTTGTATTGCGGAAAAATCT+TGG | + | chr4.3:35043239-35043258 | MS.gene23279:intron | 30.0% | |
| ! | AAATGTTGCTTCCATTGTAT+TGG | + | chr4.3:35043638-35043657 | MS.gene23279:CDS | 30.0% |
| ! | AATGTTGCTTCCATTGTATT+GGG | + | chr4.3:35043639-35043658 | MS.gene23279:CDS | 30.0% |
| ! | ACCTATTGTGTTTGATTTCA+CGG | - | chr4.3:35044181-35044200 | None:intergenic | 30.0% |
| ! | ATAGTGGAATTTCTCTTACT+TGG | - | chr4.3:35045256-35045275 | None:intergenic | 30.0% |
| ! | ATGTTAGTTTCATGATAGGA+AGG | - | chr4.3:35045499-35045518 | None:intergenic | 30.0% |
| ! | CAATTTTCGGAAAAACCTAA+GGG | + | chr4.3:35044696-35044715 | MS.gene23279:CDS | 30.0% |
| ! | CTACAAACAAAGCATTTGAA+TGG | - | chr4.3:35046472-35046491 | None:intergenic | 30.0% |
| ! | TAACACTTTAAAGGAGATAG+TGG | - | chr4.3:35045272-35045291 | None:intergenic | 30.0% |
| ! | TGTTAGTTTCATGATAGGAA+GGG | - | chr4.3:35045498-35045517 | None:intergenic | 30.0% |
| ! | TTATATTGCGGCCATAATTT+TGG | + | chr4.3:35043315-35043334 | MS.gene23279:intron | 30.0% |
| ! | TTTGAGTCCATTTTGTTAGT+TGG | + | chr4.3:35046399-35046418 | MS.gene23279:intron | 30.0% |
| ! | TTTTTCCGCAATACAAAAGT+TGG | - | chr4.3:35043236-35043255 | None:intergenic | 30.0% |
| !! | CATTCAAATGCTTTGTTTGT+AGG | + | chr4.3:35046470-35046489 | MS.gene23279:intron | 30.0% |
| !! | CTTTCCTCAAATTTGCTATA+TGG | - | chr4.3:35042968-35042987 | None:intergenic | 30.0% |
| !! | TTACTTGTTGTCTTTGTTGA+AGG | + | chr4.3:35046277-35046296 | MS.gene23279:intron | 30.0% |
| !!! | ACAATGGAAGCAACATTTTT+TGG | - | chr4.3:35043636-35043655 | None:intergenic | 30.0% |
| !!! | CAATGGAAGCAACATTTTTT+GGG | - | chr4.3:35043635-35043654 | None:intergenic | 30.0% |
| !!! | CATCATGATAATGGTTTTCT+TGG | + | chr4.3:35042999-35043018 | MS.gene23279:CDS | 30.0% |
| !!! | CATTTTTTTTCGGAGACTAT+TGG | + | chr4.3:35045364-35045383 | MS.gene23279:CDS | 30.0% |
| !!! | GTTTGTTTTGCCTTTTTTTC+AGG | + | chr4.3:35045341-35045360 | MS.gene23279:intron | 30.0% |
| !!! | TGGTTTTGAATTAAGATCGT+AGG | + | chr4.3:35043197-35043216 | MS.gene23279:intron | 30.0% |
| AAGTTTGAGAACCAAAGAGA+GGG | + | chr4.3:35043079-35043098 | MS.gene23279:CDS | 35.0% | |
| AATCATTCCTGCATCTGTTA+AGG | + | chr4.3:35045220-35045239 | MS.gene23279:CDS | 35.0% | |
| AATCATTGAATACCTGCACA+AGG | - | chr4.3:35044369-35044388 | None:intergenic | 35.0% | |
| ACCGTGAAATCAAACACAAT+AGG | + | chr4.3:35044177-35044196 | MS.gene23279:intron | 35.0% | |
| ACTCCCATAGATGCAATATA+TGG | - | chr4.3:35045125-35045144 | None:intergenic | 35.0% | |
| ATATCAGGAACAAAGTCTTC+GGG | - | chr4.3:35043503-35043522 | None:intergenic | 35.0% | |
| ATTGTCTTGGTTGACTAAAC+AGG | + | chr4.3:35043728-35043747 | MS.gene23279:intron | 35.0% | |
| CCTTGGATGATTAATCAGTT+GGG | + | chr4.3:35043053-35043072 | MS.gene23279:CDS | 35.0% | |
| CTGTGAGTAAATCATTGTCT+TGG | + | chr4.3:35043715-35043734 | MS.gene23279:intron | 35.0% | |
| GAATCTTGGAGATGTGAAAA+TGG | - | chr4.3:35045578-35045597 | None:intergenic | 35.0% | |
| GAGAATGTAATAATCTTGGC+TGG | + | chr4.3:35044313-35044332 | MS.gene23279:CDS | 35.0% | |
| GATTTCAGATCCAAAGTCAT+TGG | - | chr4.3:35045204-35045223 | None:intergenic | 35.0% | |
| GCAATTTACATGGGTATTTG+AGG | + | chr4.3:35044270-35044289 | MS.gene23279:CDS | 35.0% | |
| GGTACAGTGAAATAACTCAA+AGG | + | chr4.3:35044960-35044979 | MS.gene23279:intron | 35.0% | |
| GTATAATTGACAAGAATGCC+AGG | + | chr4.3:35046304-35046323 | MS.gene23279:CDS | 35.0% | |
| GTCACCATATATTGCATCTA+TGG | + | chr4.3:35045118-35045137 | MS.gene23279:CDS | 35.0% | |
| GTCTTCTTGTGTGAACTTTA+AGG | + | chr4.3:35042935-35042954 | MS.gene23279:CDS | 35.0% | |
| GTTGTACACTACATTCTCTA+AGG | - | chr4.3:35045755-35045774 | None:intergenic | 35.0% | |
| GTTTGACAATCCAAAAAGAG+AGG | - | chr4.3:35045084-35045103 | None:intergenic | 35.0% | |
| TAAGTTTGAGAACCAAAGAG+AGG | + | chr4.3:35043078-35043097 | MS.gene23279:CDS | 35.0% | |
| TAATATGGCTCTTACTGAAG+AGG | + | chr4.3:35045422-35045441 | MS.gene23279:CDS | 35.0% | |
| TACAAAGAGCAACTCAAACA+TGG | - | chr4.3:35045699-35045718 | None:intergenic | 35.0% | |
| TCAGAAACACATGACTATAG+AGG | - | chr4.3:35045038-35045057 | None:intergenic | 35.0% | |
| TCATAATTACTCCTTTGTGG+AGG | + | chr4.3:35045300-35045319 | MS.gene23279:intron | 35.0% | |
| TCCTTGGATGATTAATCAGT+TGG | + | chr4.3:35043052-35043071 | MS.gene23279:CDS | 35.0% | |
| TGGTGATCATCTATACAGAA+TGG | + | chr4.3:35044333-35044352 | MS.gene23279:CDS | 35.0% | |
| TGTCAAACCAAGATGCATTA+AGG | + | chr4.3:35045096-35045115 | MS.gene23279:CDS | 35.0% | |
| TTACAGGACACTGTAATGAT+GGG | + | chr4.3:35046061-35046080 | MS.gene23279:intron | 35.0% | |
| TTCTTGGTGAGAGAATCAAA+GGG | + | chr4.3:35043015-35043034 | MS.gene23279:CDS | 35.0% | |
| TTGGAAGTAACAGCAAAATC+AGG | + | chr4.3:35046152-35046171 | MS.gene23279:CDS | 35.0% | |
| TTGTATTGTTACCTCCACAA+AGG | - | chr4.3:35045314-35045333 | None:intergenic | 35.0% | |
| TTTACAGGACACTGTAATGA+TGG | + | chr4.3:35046060-35046079 | MS.gene23279:intron | 35.0% | |
| TTTCTTGGTGAGAGAATCAA+AGG | + | chr4.3:35043014-35043033 | MS.gene23279:CDS | 35.0% | |
| TTTGGAAATGGCATCAACTT+TGG | + | chr4.3:35043942-35043961 | MS.gene23279:CDS | 35.0% | |
| ! | AAATTGGTTTCAAGGAACAG+CGG | + | chr4.3:35044237-35044256 | MS.gene23279:CDS | 35.0% |
| ! | ATATGTGGAGGTATGTATCA+AGG | + | chr4.3:35043971-35043990 | MS.gene23279:intron | 35.0% |
| ! | CATAAATGATGGAACCTGAA+AGG | - | chr4.3:35043598-35043617 | None:intergenic | 35.0% |
| ! | CCAATTTTCGGAAAAACCTA+AGG | + | chr4.3:35044695-35044714 | MS.gene23279:CDS | 35.0% |
| ! | CCTTAGGTTTTTCCGAAAAT+TGG | - | chr4.3:35044698-35044717 | None:intergenic | 35.0% |
| ! | CTCTTTTGGTAAGAGGAAAA+AGG | - | chr4.3:35043683-35043702 | None:intergenic | 35.0% |
| ! | GTTGATGCCATTTCCAAAAT+AGG | - | chr4.3:35043940-35043959 | None:intergenic | 35.0% |
| ! | TTTTACCACTATAGCTGATG+TGG | + | chr4.3:35043372-35043391 | MS.gene23279:intron | 35.0% |
| !! | TACTCAAGCTTCTAAAATGG+AGG | + | chr4.3:35045168-35045187 | MS.gene23279:CDS | 35.0% |
| !! | TCAAACACAATAGGTTTTGG+CGG | + | chr4.3:35044186-35044205 | MS.gene23279:intron | 35.0% |
| !! | TCTATACAGAATGGACTACA+TGG | + | chr4.3:35044342-35044361 | MS.gene23279:CDS | 35.0% |
| !! | TTTGTTGGTGGTAAGAATCT+TGG | - | chr4.3:35045592-35045611 | None:intergenic | 35.0% |
| !!! | AGAACCAAGGTTTTAAACTG+AGG | + | chr4.3:35045860-35045879 | MS.gene23279:intron | 35.0% |
| !!! | TACATTTTTCAGGTACCTGT+TGG | + | chr4.3:35043798-35043817 | MS.gene23279:intron | 35.0% |
| AAATGATGCCGTTGAGACTA+AGG | + | chr4.3:35043145-35043164 | MS.gene23279:CDS | 40.0% | |
| AACCAAAGAGAGGGTTAAGA+AGG | + | chr4.3:35043088-35043107 | MS.gene23279:CDS | 40.0% | |
| AATGGAGAAAGCGACAATAG+AGG | + | chr4.3:35046554-35046573 | MS.gene23279:CDS | 40.0% | |
| AGATCCAAAGTCATTGGATG+TGG | - | chr4.3:35045198-35045217 | None:intergenic | 40.0% | |
| AGATGTGAAAATGGGTGTCT+TGG | - | chr4.3:35045569-35045588 | None:intergenic | 40.0% | |
| AGTGTACAACACTCCATTGT+GGG | + | chr4.3:35045765-35045784 | MS.gene23279:CDS | 40.0% | |
| AGTTCATTCTCTTGCCTCTT+GGG | + | chr4.3:35044774-35044793 | MS.gene23279:intron | 40.0% | |
| AGTTCTCGGCCAAGAAATTA+TGG | - | chr4.3:35045836-35045855 | None:intergenic | 40.0% | |
| ATGAGCAACTGTATCAACAG+TGG | + | chr4.3:35043849-35043868 | MS.gene23279:CDS | 40.0% | |
| ATGCTGTGAGGCAATTTACA+TGG | + | chr4.3:35044260-35044279 | MS.gene23279:CDS | 40.0% | |
| ATGGTGACCTTAATGCATCT+TGG | - | chr4.3:35045106-35045125 | None:intergenic | 40.0% | |
| ATTGACAAGAATGCCAGGAT+TGG | + | chr4.3:35046309-35046328 | MS.gene23279:CDS | 40.0% | |
| CATGAACAAAGATGTGAGCA+TGG | + | chr4.3:35046347-35046366 | MS.gene23279:intron | 40.0% | |
| CCCAACTGATTAATCATCCA+AGG | - | chr4.3:35043056-35043075 | None:intergenic | 40.0% | |
| CGGATGTAAAATCCATCTTC+TGG | - | chr4.3:35046516-35046535 | None:intergenic | 40.0% | |
| CTCAGAAGCAATTTCGGATT+CGG | - | chr4.3:35046104-35046123 | None:intergenic | 40.0% | |
| CTGTTGATACAGTTGCTCAT+TGG | - | chr4.3:35043849-35043868 | None:intergenic | 40.0% | |
| GAACGTTCACGTTTGGATTA+CGG | + | chr4.3:35045789-35045808 | MS.gene23279:CDS | 40.0% | |
| GACAATGATTTACTCACAGC+AGG | - | chr4.3:35043714-35043733 | None:intergenic | 40.0% | |
| GACTAAACAGGCATCAGTTA+TGG | + | chr4.3:35043740-35043759 | MS.gene23279:intron | 40.0% | |
| GAGTTGCTCTTTGTAGATTG+TGG | + | chr4.3:35045704-35045723 | MS.gene23279:intron | 40.0% | |
| GATCCAAAGTCATTGGATGT+GGG | - | chr4.3:35045197-35045216 | None:intergenic | 40.0% | |
| GATGTGAAAATGGGTGTCTT+GGG | - | chr4.3:35045568-35045587 | None:intergenic | 40.0% | |
| GTGGTAAAAAATGGATCCCA+TGG | - | chr4.3:35043361-35043380 | None:intergenic | 40.0% | |
| GTGGTCCACAACCAAAATTA+TGG | - | chr4.3:35043329-35043348 | None:intergenic | 40.0% | |
| TAGTGTACAACACTCCATTG+TGG | + | chr4.3:35045764-35045783 | MS.gene23279:CDS | 40.0% | |
| TAGTTCATTCTCTTGCCTCT+TGG | + | chr4.3:35044773-35044792 | MS.gene23279:intron | 40.0% | |
| TATCCCACATCCAATGACTT+TGG | + | chr4.3:35045191-35045210 | MS.gene23279:CDS | 40.0% | |
| TCAAATCAAACCCTAAGGCT+TGG | + | chr4.3:35045990-35046009 | MS.gene23279:intron | 40.0% | |
| TCAGCTTACCTTAGTCTCAA+CGG | - | chr4.3:35043156-35043175 | None:intergenic | 40.0% | |
| TCTTGGTGAGAGAATCAAAG+GGG | + | chr4.3:35043016-35043035 | MS.gene23279:CDS | 40.0% | |
| TGCTAGCTCAGAAGCAATTT+CGG | - | chr4.3:35046110-35046129 | None:intergenic | 40.0% | |
| TGCTGTGAGGCAATTTACAT+GGG | + | chr4.3:35044261-35044280 | MS.gene23279:CDS | 40.0% | |
| TTAGTCAAGGTAGATAGCAG+AGG | + | chr4.3:35044663-35044682 | MS.gene23279:CDS | 40.0% | |
| TTGACAAGAATGCCAGGATT+GGG | + | chr4.3:35046310-35046329 | MS.gene23279:CDS | 40.0% | |
| TTGCATTCCTTAACAGATGC+AGG | - | chr4.3:35045230-35045249 | None:intergenic | 40.0% | |
| ! | AAGCAATTTCGGATTCGGTT+TGG | - | chr4.3:35046099-35046118 | None:intergenic | 40.0% |
| ! | AATGGCATCAACTTTGGAGA+TGG | + | chr4.3:35043948-35043967 | MS.gene23279:CDS | 40.0% |
| ! | AGGTCGCATCATCCAATTTT+CGG | + | chr4.3:35044683-35044702 | MS.gene23279:CDS | 40.0% |
| ! | CAACTTTGGAGATGGATATG+TGG | + | chr4.3:35043956-35043975 | MS.gene23279:CDS | 40.0% |
| ! | CAAGCAGATACCTCTCTTTT+TGG | + | chr4.3:35045071-35045090 | MS.gene23279:CDS | 40.0% |
| ! | CAAGGTTTTTGATGTCTCAG+CGG | - | chr4.3:35045960-35045979 | None:intergenic | 40.0% |
| ! | CACTGCCAACTTTTGTATTG+CGG | + | chr4.3:35043228-35043247 | MS.gene23279:intron | 40.0% |
| ! | CTGTTACTTCCAATCCCAAT+AGG | - | chr4.3:35046145-35046164 | None:intergenic | 40.0% |
| ! | GAGTCCATTTTGTTAGTTGG+TGG | + | chr4.3:35046402-35046421 | MS.gene23279:intron | 40.0% |
| ! | GATTTAAGATCAGCACCCTT+AGG | - | chr4.3:35044714-35044733 | None:intergenic | 40.0% |
| ! | GCTACCTCAGTTTAAAACCT+TGG | - | chr4.3:35045867-35045886 | None:intergenic | 40.0% |
| ! | GCTGGGAAAAATTGGTTTCA+AGG | + | chr4.3:35044229-35044248 | MS.gene23279:CDS | 40.0% |
| ! | GGACCACAGTTTAAAACCAT+GGG | + | chr4.3:35043342-35043361 | MS.gene23279:intron | 40.0% |
| ! | TGGACCACAGTTTAAAACCA+TGG | + | chr4.3:35043341-35043360 | MS.gene23279:intron | 40.0% |
| !! | AGTTTTCTAGCCAAGCCTTA+GGG | - | chr4.3:35046003-35046022 | None:intergenic | 40.0% |
| !! | ATCGGATTACGGATTAGTCA+AGG | + | chr4.3:35044650-35044669 | MS.gene23279:CDS | 40.0% |
| !! | CCTTGGTTCTATAGAGTTCT+CGG | - | chr4.3:35045850-35045869 | None:intergenic | 40.0% |
| !! | GATGGATTTTACATCCGATC+AGG | + | chr4.3:35046519-35046538 | MS.gene23279:CDS | 40.0% |
| !! | GGGTGCTGATCTTAAATCAA+TGG | + | chr4.3:35044716-35044735 | MS.gene23279:CDS | 40.0% |
| !! | TAGTTTTCTAGCCAAGCCTT+AGG | - | chr4.3:35046004-35046023 | None:intergenic | 40.0% |
| !!! | ATTTTTCAGGTACCTGTTGG+TGG | + | chr4.3:35043801-35043820 | MS.gene23279:intron | 40.0% |
| !!! | CGCGAACGTTTTAAGACTTA+AGG | + | chr4.3:35044897-35044916 | MS.gene23279:intron | 40.0% |
| !!! | GATCCCATGGTTTTAAACTG+TGG | - | chr4.3:35043348-35043367 | None:intergenic | 40.0% |
| !!! | TTTTTCAGGTACCTGTTGGT+GGG | + | chr4.3:35043802-35043821 | MS.gene23279:intron | 40.0% |
| AATAGGTGCGAGCAATGTGA+CGG | - | chr4.3:35043923-35043942 | None:intergenic | 45.0% | |
| AATTGCTTCTGAGCTAGCAC+AGG | + | chr4.3:35046111-35046130 | MS.gene23279:CDS | 45.0% | |
| AGAGGAAAAAGGTGAACACC+AGG | - | chr4.3:35043672-35043691 | None:intergenic | 45.0% | |
| AGGTAAGCTGAATCATGTCG+AGG | + | chr4.3:35043165-35043184 | MS.gene23279:intron | 45.0% | |
| ATGGCTCTTACTGAAGAGGT+AGG | + | chr4.3:35045426-35045445 | MS.gene23279:intron | 45.0% | |
| ATTGCTTCTGAGCTAGCACA+GGG | + | chr4.3:35046112-35046131 | MS.gene23279:CDS | 45.0% | |
| CACAGGGAAAGGTTCCTATT+GGG | + | chr4.3:35046128-35046147 | MS.gene23279:CDS | 45.0% | |
| CACGACTGAAAAACAGGCAA+TGG | - | chr4.3:35044629-35044648 | None:intergenic | 45.0% | |
| CAGGAGAAGCTGGGAAAAAT+TGG | + | chr4.3:35044221-35044240 | MS.gene23279:CDS | 45.0% | |
| CCGAGAACTCTATAGAACCA+AGG | + | chr4.3:35045847-35045866 | MS.gene23279:intron | 45.0% | |
| CGGAAAAATCTTGGAAAGCG+CGG | + | chr4.3:35043248-35043267 | MS.gene23279:intron | 45.0% | |
| CTTGGTGAGAGAATCAAAGG+GGG | + | chr4.3:35043017-35043036 | MS.gene23279:CDS | 45.0% | |
| GAAGCAGATAGACCAGAAGA+TGG | + | chr4.3:35046501-35046520 | MS.gene23279:CDS | 45.0% | |
| GAGATCTAGTGCAGCTAATG+CGG | + | chr4.3:35045919-35045938 | MS.gene23279:intron | 45.0% | |
| GATGACATCTTTCCCAATCC+TGG | - | chr4.3:35046325-35046344 | None:intergenic | 45.0% | |
| GCAGCTCAAATCAAACCCTA+AGG | + | chr4.3:35045985-35046004 | MS.gene23279:intron | 45.0% | |
| GGAAAGGTTCCTATTGGGAT+TGG | + | chr4.3:35046133-35046152 | MS.gene23279:CDS | 45.0% | |
| GGAGACTATTGGGAAGACAT+TGG | + | chr4.3:35045375-35045394 | MS.gene23279:CDS | 45.0% | |
| GGGGTGTGAATTATAGTCCT+TGG | + | chr4.3:35043036-35043055 | MS.gene23279:CDS | 45.0% | |
| GGTAAGCTGAATCATGTCGA+GGG | + | chr4.3:35043166-35043185 | MS.gene23279:intron | 45.0% | |
| GTAAGCTGAATCATGTCGAG+GGG | + | chr4.3:35043167-35043186 | MS.gene23279:intron | 45.0% | |
| GTGGATGCAATAATCTCGCA+TGG | + | chr4.3:35045723-35045742 | MS.gene23279:CDS | 45.0% | |
| GTGTCAACTTCAGACCTTTC+AGG | + | chr4.3:35043581-35043600 | MS.gene23279:intron | 45.0% | |
| GTTGCTTCCATTGTATTGGG+AGG | + | chr4.3:35043642-35043661 | MS.gene23279:CDS | 45.0% | |
| TATGCGAACATGTTCCCAAG+AGG | - | chr4.3:35044791-35044810 | None:intergenic | 45.0% | |
| TCTTGGGAACATGTTCGCAT+AGG | + | chr4.3:35044790-35044809 | MS.gene23279:intron | 45.0% | |
| TGATTTGAGCTGCAACGTCA+AGG | - | chr4.3:35045978-35045997 | None:intergenic | 45.0% | |
| TTCAGTCGTGCATCGGATTA+CGG | + | chr4.3:35044639-35044658 | MS.gene23279:intron | 45.0% | |
| ! | ACAGTATCATGTGCTGCTGT+TGG | + | chr4.3:35044494-35044513 | MS.gene23279:CDS | 45.0% |
| ! | CAATTTTTCCCAGCTTCTCC+TGG | - | chr4.3:35044223-35044242 | None:intergenic | 45.0% |
| ! | CACATTGCTCGCACCTATTT+TGG | + | chr4.3:35043924-35043943 | MS.gene23279:CDS | 45.0% |
| ! | CTTTGGAGATGGATATGTGG+AGG | + | chr4.3:35043959-35043978 | MS.gene23279:CDS | 45.0% |
| ! | GTAGCAGCTCTTTTGGTAAG+AGG | - | chr4.3:35043690-35043709 | None:intergenic | 45.0% |
| !! | CCTGTTTTTCAGTCGTGCAT+CGG | + | chr4.3:35044632-35044651 | MS.gene23279:intron | 45.0% |
| !! | GCTCGCACCTATTTTGGAAA+TGG | + | chr4.3:35043930-35043949 | MS.gene23279:CDS | 45.0% |
| !!! | TGCGGCCATAATTTTGGTTG+TGG | + | chr4.3:35043321-35043340 | MS.gene23279:intron | 45.0% |
| ACGTGAACGTTCACCCACAA+TGG | - | chr4.3:35045781-35045800 | None:intergenic | 50.0% | |
| AGAACAGCAGACACAACACC+AGG | - | chr4.3:35043119-35043138 | None:intergenic | 50.0% | |
| AGCAGACACAACACCAGGTT+TGG | - | chr4.3:35043114-35043133 | None:intergenic | 50.0% | |
| AGGACCTCCTCCCAATACAA+TGG | - | chr4.3:35043652-35043671 | None:intergenic | 50.0% | |
| AGGGTTAAGAAGGCCAAACC+TGG | + | chr4.3:35043098-35043117 | MS.gene23279:CDS | 50.0% | |
| ATTGTATTGGGAGGAGGTCC+TGG | + | chr4.3:35043651-35043670 | MS.gene23279:CDS | 50.0% | |
| CCGATGCACGACTGAAAAAC+AGG | - | chr4.3:35044635-35044654 | None:intergenic | 50.0% | |
| GCACAGGGAAAGGTTCCTAT+TGG | + | chr4.3:35046127-35046146 | MS.gene23279:CDS | 50.0% | |
| GCTTCCATTGTATTGGGAGG+AGG | + | chr4.3:35043645-35043664 | MS.gene23279:CDS | 50.0% | |
| GGCCTTCTTAACCCTCTCTT+TGG | - | chr4.3:35043093-35043112 | None:intergenic | 50.0% | |
| TGCAGCCACATCAGCTATAG+TGG | - | chr4.3:35043380-35043399 | None:intergenic | 50.0% | |
| TGTGGGTGAACGTTCACGTT+TGG | + | chr4.3:35045782-35045801 | MS.gene23279:CDS | 50.0% | |
| TTCTGAGCTAGCACAGGGAA+AGG | + | chr4.3:35046117-35046136 | MS.gene23279:CDS | 50.0% | |
| ! | AGCAGGTGTAGCAGCTCTTT+TGG | - | chr4.3:35043697-35043716 | None:intergenic | 50.0% |
| ! | TACCTGTTGGTGGGTGCTAT+AGG | + | chr4.3:35043811-35043830 | MS.gene23279:CDS | 50.0% |
| AAGGAACAGCGGATGCTGTG+AGG | + | chr4.3:35044248-35044267 | MS.gene23279:CDS | 55.0% | |
| ACTCAAACGCCAGGAGAAGC+TGG | + | chr4.3:35044211-35044230 | MS.gene23279:CDS | 55.0% | |
| AGCCTATAGCACCCACCAAC+AGG | - | chr4.3:35043816-35043835 | None:intergenic | 55.0% | |
| AGCTGATGTGGCTGCAACTG+CGG | + | chr4.3:35043384-35043403 | MS.gene23279:intron | 55.0% | |
| CTCAAACGCCAGGAGAAGCT+GGG | + | chr4.3:35044212-35044231 | MS.gene23279:CDS | 55.0% | |
| GGACTACATGGACCTTGTGC+AGG | + | chr4.3:35044354-35044373 | MS.gene23279:CDS | 55.0% | |
| ! | GGATTACGGTGTTGAGCTCC+AGG | + | chr4.3:35045803-35045822 | MS.gene23279:CDS | 55.0% |
| !! | CATGTGCTGCTGTTGGTGAC+AGG | + | chr4.3:35044501-35044520 | MS.gene23279:CDS | 55.0% |
| TTGGCGGCTACTCAAACGCC+AGG | + | chr4.3:35044202-35044221 | MS.gene23279:CDS | 60.0% | |
| TCATGTCGAGGGGTCCGTCG+TGG | + | chr4.3:35043177-35043196 | MS.gene23279:intron | 65.0% | |
| TGTGGCTGCAACTGCGGTCG+CGG | + | chr4.3:35043390-35043409 | MS.gene23279:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 35042930 | 35046593 | 35042930 | ID=MS.gene23279 |
| chr4.3 | mRNA | 35042930 | 35046593 | 35042930 | ID=MS.gene23279.t1;Parent=MS.gene23279 |
| chr4.3 | exon | 35042930 | 35043166 | 35042930 | ID=MS.gene23279.t1.exon1;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35042930 | 35043166 | 35042930 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35043594 | 35043716 | 35043594 | ID=MS.gene23279.t1.exon2;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35043594 | 35043716 | 35043594 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35043810 | 35043980 | 35043810 | ID=MS.gene23279.t1.exon3;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35043810 | 35043980 | 35043810 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35044199 | 35044375 | 35044199 | ID=MS.gene23279.t1.exon4;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35044199 | 35044375 | 35044199 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35044467 | 35044522 | 35044467 | ID=MS.gene23279.t1.exon5;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35044467 | 35044522 | 35044467 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35044644 | 35044737 | 35044644 | ID=MS.gene23279.t1.exon6;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35044644 | 35044737 | 35044644 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35045071 | 35045256 | 35045071 | ID=MS.gene23279.t1.exon7;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35045071 | 35045256 | 35045071 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35045363 | 35045443 | 35045363 | ID=MS.gene23279.t1.exon8;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35045363 | 35045443 | 35045363 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35045541 | 35045627 | 35045541 | ID=MS.gene23279.t1.exon9;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35045541 | 35045627 | 35045541 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35045720 | 35045824 | 35045720 | ID=MS.gene23279.t1.exon10;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35045720 | 35045824 | 35045720 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35046067 | 35046173 | 35046067 | ID=MS.gene23279.t1.exon11;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35046067 | 35046173 | 35046067 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35046299 | 35046359 | 35046299 | ID=MS.gene23279.t1.exon12;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35046299 | 35046359 | 35046299 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| chr4.3 | exon | 35046492 | 35046593 | 35046492 | ID=MS.gene23279.t1.exon13;Parent=MS.gene23279.t1 |
| chr4.3 | CDS | 35046492 | 35046593 | 35046492 | ID=cds.MS.gene23279.t1;Parent=MS.gene23279.t1 |
| Gene Sequence |
| Protein sequence |
