Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057304.t1 | XP_003606943.1 | 96.4 | 528 | 19 | 0 | 1 | 528 | 1 | 528 | 2.90E-297 | 1030.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057304.t1 | Q00081 | 77.8 | 469 | 104 | 0 | 60 | 528 | 2 | 470 | 3.8e-221 | 768.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057304.t1 | G7JHD0 | 96.4 | 528 | 19 | 0 | 1 | 528 | 1 | 528 | 2.1e-297 | 1030.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057304 | MS.gene064837 | 0.882978 | 6.62E-71 | -1.69E-46 |
| MS.gene057304 | MS.gene23279 | 0.996289 | 1.17E-225 | -1.69E-46 |
| MS.gene057304 | MS.gene52770 | 0.88163 | 2.05E-70 | -1.69E-46 |
| MS.gene057304 | MS.gene69326 | 0.858144 | 1.01E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057304.t1 | MTR_4g070430 | 96.402 | 528 | 19 | 0 | 1 | 528 | 1 | 528 | 0.0 | 1055 |
| MS.gene057304.t1 | MTR_4g070430 | 96.211 | 475 | 18 | 0 | 1 | 475 | 1 | 475 | 0.0 | 951 |
| MS.gene057304.t1 | MTR_3g116860 | 79.924 | 528 | 96 | 2 | 1 | 528 | 1 | 518 | 0.0 | 860 |
| MS.gene057304.t1 | MTR_3g112070 | 69.048 | 504 | 145 | 4 | 29 | 528 | 34 | 530 | 0.0 | 710 |
| MS.gene057304.t1 | MTR_4g131760 | 64.655 | 464 | 160 | 2 | 66 | 528 | 61 | 521 | 0.0 | 654 |
| MS.gene057304.t1 | MTR_7g111020 | 67.038 | 449 | 147 | 1 | 81 | 528 | 80 | 528 | 0.0 | 643 |
| MS.gene057304.t1 | MTR_7g111020 | 67.424 | 396 | 128 | 1 | 134 | 528 | 1 | 396 | 0.0 | 568 |
| MS.gene057304.t1 | MTR_3g082150 | 53.066 | 424 | 191 | 5 | 108 | 528 | 96 | 514 | 1.79e-163 | 474 |
| MS.gene057304.t1 | MTR_5g097010 | 52.594 | 424 | 193 | 5 | 108 | 528 | 97 | 515 | 6.26e-162 | 470 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057304.t1 | AT4G39210 | 70.833 | 528 | 146 | 3 | 2 | 528 | 1 | 521 | 0.0 | 783 |
| MS.gene057304.t1 | AT4G39210 | 70.833 | 528 | 146 | 3 | 2 | 528 | 1 | 521 | 0.0 | 783 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT2G21590 | 72.222 | 504 | 134 | 2 | 26 | 528 | 25 | 523 | 0.0 | 741 |
| MS.gene057304.t1 | AT1G27680 | 67.793 | 503 | 158 | 2 | 23 | 524 | 15 | 514 | 0.0 | 715 |
| MS.gene057304.t1 | AT5G19220 | 61.856 | 485 | 184 | 1 | 44 | 528 | 39 | 522 | 0.0 | 652 |
| MS.gene057304.t1 | AT5G48300 | 53.538 | 424 | 189 | 5 | 108 | 528 | 102 | 520 | 3.41e-164 | 476 |
| MS.gene057304.t1 | AT1G05610 | 40.950 | 442 | 236 | 10 | 94 | 528 | 53 | 476 | 1.84e-109 | 335 |
| MS.gene057304.t1 | AT1G05610 | 40.674 | 445 | 239 | 10 | 94 | 528 | 53 | 482 | 3.26e-109 | 334 |
Find 117 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGCTCGCACCTATTT+TGG | 0.081433 | 4.2:+36553715 | MS.gene057304:CDS |
| CAAATTTGCTATATGGTTAT+TGG | 0.165827 | 4.2:-36552749 | None:intergenic |
| ATTCTCAATGTTAGTGTTCT+TGG | 0.168119 | 4.2:-36554087 | None:intergenic |
| GTGTCAACTTCAGACCTTTC+AGG | 0.205906 | 4.2:+36553372 | MS.gene057304:intron |
| GTTGATGCCATTTCCAAAAT+AGG | 0.213388 | 4.2:-36553728 | None:intergenic |
| GTCTTCTTGTGTGAACTTTA+AGG | 0.214379 | 4.2:+36552726 | MS.gene057304:CDS |
| CTTTCCTCAAATTTGCTATA+TGG | 0.245307 | 4.2:-36552756 | None:intergenic |
| GTCACCATATATTGCATCTA+TGG | 0.271084 | 4.2:+36554909 | MS.gene057304:CDS |
| GGCCTTCTTAACCCTCTCTT+TGG | 0.286759 | 4.2:-36552881 | None:intergenic |
| AAATGTTGCTTCCATTGTAT+TGG | 0.295734 | 4.2:+36553429 | MS.gene057304:CDS |
| TGCTAGCTCAGAAGCAATTT+CGG | 0.314259 | 4.2:-36555898 | None:intergenic |
| AGCAGGTGTAGCAGCTCTTT+TGG | 0.314559 | 4.2:-36553485 | None:intergenic |
| AATGTTGCTTCCATTGTATT+GGG | 0.317534 | 4.2:+36553430 | MS.gene057304:CDS |
| GAACGTTCACGTTTGGATTA+CGG | 0.324212 | 4.2:+36555580 | MS.gene057304:CDS |
| TTCAGTCGTGCATCGGATTA+CGG | 0.329466 | 4.2:+36554430 | MS.gene057304:intron |
| TGTCAAACCAAGATGCATTA+AGG | 0.343976 | 4.2:+36554887 | MS.gene057304:CDS |
| CTCAGAAGCAATTTCGGATT+CGG | 0.345496 | 4.2:-36555892 | None:intergenic |
| TTTGTTGGTGGTAAGAATCT+TGG | 0.351797 | 4.2:-36555380 | None:intergenic |
| CTGTTACTTCCAATCCCAAT+AGG | 0.370914 | 4.2:-36555933 | None:intergenic |
| GCACAGGGAAAGGTTCCTAT+TGG | 0.371034 | 4.2:+36555918 | MS.gene057304:CDS |
| GAATCTTGGAGATGTGAAAA+TGG | 0.376696 | 4.2:-36555366 | None:intergenic |
| CTGCATTTATCAATCTTTGT+TGG | 0.377402 | 4.2:-36555395 | None:intergenic |
| TACCTGTTGGTGGGTGCTAT+AGG | 0.383651 | 4.2:+36553602 | MS.gene057304:CDS |
| TGTGGGTGAACGTTCACGTT+TGG | 0.391042 | 4.2:+36555573 | MS.gene057304:CDS |
| TTTGGAAATGGCATCAACTT+TGG | 0.391193 | 4.2:+36553733 | MS.gene057304:CDS |
| ACTCCCATAGATGCAATATA+TGG | 0.392783 | 4.2:-36554913 | None:intergenic |
| GATTTCAGATCCAAAGTCAT+TGG | 0.397964 | 4.2:-36554992 | None:intergenic |
| CGGATGTAAAATCCATCTTC+TGG | 0.403798 | 4.2:-36556304 | None:intergenic |
| AGCAGACACAACACCAGGTT+TGG | 0.410213 | 4.2:-36552902 | None:intergenic |
| CATTGAGAATGTAATAATCT+TGG | 0.411542 | 4.2:+36554100 | MS.gene057304:CDS |
| ACTCAAACGCCAGGAGAAGC+TGG | 0.413697 | 4.2:+36554002 | MS.gene057304:CDS |
| ATTGTATTGGGAGGAGGTCC+TGG | 0.415190 | 4.2:+36553442 | MS.gene057304:CDS |
| CACAGGGAAAGGTTCCTATT+GGG | 0.422057 | 4.2:+36555919 | MS.gene057304:CDS |
| GGATTACGGTGTTGAGCTCC+AGG | 0.426885 | 4.2:+36555594 | MS.gene057304:CDS |
| AATCATTCCTGCATCTGTTA+AGG | 0.427773 | 4.2:+36555011 | MS.gene057304:CDS |
| GCAATTTACATGGGTATTTG+AGG | 0.429868 | 4.2:+36554061 | MS.gene057304:CDS |
| AGCCTATAGCACCCACCAAC+AGG | 0.430792 | 4.2:-36553604 | None:intergenic |
| AAATGATGCCGTTGAGACTA+AGG | 0.434380 | 4.2:+36552936 | MS.gene057304:CDS |
| AAGCAATTTCGGATTCGGTT+TGG | 0.438840 | 4.2:-36555887 | None:intergenic |
| TCCTTGGATGATTAATCAGT+TGG | 0.439153 | 4.2:+36552843 | MS.gene057304:CDS |
| ATGGTGACCTTAATGCATCT+TGG | 0.439664 | 4.2:-36554894 | None:intergenic |
| TTTACAGGACACTGTAATGA+TGG | 0.445727 | 4.2:+36555851 | MS.gene057304:intron |
| GGAAAGGTTCCTATTGGGAT+TGG | 0.456229 | 4.2:+36555924 | MS.gene057304:CDS |
| ATTGACAAGAATGCCAGGAT+TGG | 0.456643 | 4.2:+36556100 | MS.gene057304:CDS |
| CTGTTGATACAGTTGCTCAT+TGG | 0.456942 | 4.2:-36553637 | None:intergenic |
| GCTTCCATTGTATTGGGAGG+AGG | 0.457513 | 4.2:+36553436 | MS.gene057304:CDS |
| AGATCCAAAGTCATTGGATG+TGG | 0.463757 | 4.2:-36554986 | None:intergenic |
| CAACAAAGATTGATAAATGC+AGG | 0.467155 | 4.2:+36555396 | MS.gene057304:CDS |
| TTGCATTCCTTAACAGATGC+AGG | 0.468552 | 4.2:-36555018 | None:intergenic |
| TTGACAAGAATGCCAGGATT+GGG | 0.469631 | 4.2:+36556101 | MS.gene057304:CDS |
| GATTTAAGATCAGCACCCTT+AGG | 0.470111 | 4.2:-36554502 | None:intergenic |
| TTGGAAGTAACAGCAAAATC+AGG | 0.473432 | 4.2:+36555943 | MS.gene057304:CDS |
| ATCAGGAATCACAATTGTAA+TGG | 0.475871 | 4.2:+36556327 | MS.gene057304:CDS |
| CATTTATCAATCTTTGTTGG+TGG | 0.476162 | 4.2:-36555392 | None:intergenic |
| GGGTGCTGATCTTAAATCAA+TGG | 0.482192 | 4.2:+36554507 | MS.gene057304:CDS |
| AACCAAAGAGAGGGTTAAGA+AGG | 0.486759 | 4.2:+36552879 | MS.gene057304:CDS |
| GTTGTACACTACATTCTCTA+AGG | 0.489282 | 4.2:-36555543 | None:intergenic |
| TATCCCACATCCAATGACTT+TGG | 0.491448 | 4.2:+36554982 | MS.gene057304:CDS |
| ATGCTGTGAGGCAATTTACA+TGG | 0.492795 | 4.2:+36554051 | MS.gene057304:CDS |
| ATAACCATATAGCAAATTTG+AGG | 0.496126 | 4.2:+36552752 | MS.gene057304:CDS |
| GGGGTGTGAATTATAGTCCT+TGG | 0.503061 | 4.2:+36552827 | MS.gene057304:CDS |
| GATGTGAAAATGGGTGTCTT+GGG | 0.504166 | 4.2:-36555356 | None:intergenic |
| AGATGTGAAAATGGGTGTCT+TGG | 0.510373 | 4.2:-36555357 | None:intergenic |
| CATGTGCTGCTGTTGGTGAC+AGG | 0.513782 | 4.2:+36554292 | MS.gene057304:CDS |
| GATGACATCTTTCCCAATCC+TGG | 0.514030 | 4.2:-36556113 | None:intergenic |
| CCTTGGATGATTAATCAGTT+GGG | 0.517935 | 4.2:+36552844 | MS.gene057304:CDS |
| AATCTTGGAGATGTGAAAAT+GGG | 0.520261 | 4.2:-36555365 | None:intergenic |
| TTTCTTGGTGAGAGAATCAA+AGG | 0.520401 | 4.2:+36552805 | MS.gene057304:CDS |
| TTGGCGGCTACTCAAACGCC+AGG | 0.530303 | 4.2:+36553993 | MS.gene057304:CDS |
| GAAGCAGATAGACCAGAAGA+TGG | 0.532366 | 4.2:+36556292 | MS.gene057304:CDS |
| AATTGCTTCTGAGCTAGCAC+AGG | 0.540855 | 4.2:+36555902 | MS.gene057304:CDS |
| TCACCATATATTGCATCTAT+GGG | 0.541411 | 4.2:+36554910 | MS.gene057304:CDS |
| AATGGCATCAACTTTGGAGA+TGG | 0.542455 | 4.2:+36553739 | MS.gene057304:CDS |
| GGACTACATGGACCTTGTGC+AGG | 0.543873 | 4.2:+36554145 | MS.gene057304:CDS |
| TACTCAAGCTTCTAAAATGG+AGG | 0.545196 | 4.2:+36554959 | MS.gene057304:CDS |
| GGATCATAAAATTTGAACAA+TGG | 0.546619 | 4.2:-36555335 | None:intergenic |
| TCTATACAGAATGGACTACA+TGG | 0.550347 | 4.2:+36554133 | MS.gene057304:CDS |
| GGAGACTATTGGGAAGACAT+TGG | 0.550910 | 4.2:+36555166 | MS.gene057304:CDS |
| CTCAAACGCCAGGAGAAGCT+GGG | 0.551829 | 4.2:+36554003 | MS.gene057304:CDS |
| GTATAATTGACAAGAATGCC+AGG | 0.558591 | 4.2:+36556095 | MS.gene057304:CDS |
| TTCTGAGCTAGCACAGGGAA+AGG | 0.561514 | 4.2:+36555908 | MS.gene057304:CDS |
| CATAAATGATGGAACCTGAA+AGG | 0.567480 | 4.2:-36553386 | None:intergenic |
| AATGGAGAAAGCGACAATAG+AGG | 0.575600 | 4.2:+36556345 | MS.gene057304:CDS |
| AGGGTTAAGAAGGCCAAACC+TGG | 0.576523 | 4.2:+36552889 | MS.gene057304:CDS |
| TTACAGGACACTGTAATGAT+GGG | 0.576561 | 4.2:+36555852 | MS.gene057304:intron |
| CCCAACTGATTAATCATCCA+AGG | 0.580151 | 4.2:-36552844 | None:intergenic |
| TTACAATTGTGATTCCTGAT+CGG | 0.588358 | 4.2:-36556324 | None:intergenic |
| GAGAATGTAATAATCTTGGC+TGG | 0.593829 | 4.2:+36554104 | MS.gene057304:CDS |
| AGTGTACAACACTCCATTGT+GGG | 0.594262 | 4.2:+36555556 | MS.gene057304:CDS |
| CAACTTTGGAGATGGATATG+TGG | 0.599466 | 4.2:+36553747 | MS.gene057304:CDS |
| ACAGTATCATGTGCTGCTGT+TGG | 0.599712 | 4.2:+36554285 | MS.gene057304:CDS |
| TAATATGGCTCTTACTGAAG+AGG | 0.599834 | 4.2:+36555213 | MS.gene057304:CDS |
| ACGTGAACGTTCACCCACAA+TGG | 0.600506 | 4.2:-36555569 | None:intergenic |
| AACAAAGATTGATAAATGCA+GGG | 0.604087 | 4.2:+36555397 | MS.gene057304:CDS |
| TCAGCTTACCTTAGTCTCAA+CGG | 0.607553 | 4.2:-36552944 | None:intergenic |
| GTTGCTTCCATTGTATTGGG+AGG | 0.607715 | 4.2:+36553433 | MS.gene057304:CDS |
| TAAGTTTGAGAACCAAAGAG+AGG | 0.613319 | 4.2:+36552869 | MS.gene057304:CDS |
| TGGTGATCATCTATACAGAA+TGG | 0.614075 | 4.2:+36554124 | MS.gene057304:CDS |
| TTCTTGGTGAGAGAATCAAA+GGG | 0.614967 | 4.2:+36552806 | MS.gene057304:CDS |
| AGGACCTCCTCCCAATACAA+TGG | 0.628390 | 4.2:-36553440 | None:intergenic |
| GATCCAAAGTCATTGGATGT+GGG | 0.628997 | 4.2:-36554985 | None:intergenic |
| AGAACAGCAGACACAACACC+AGG | 0.631071 | 4.2:-36552907 | None:intergenic |
| TGCTGTGAGGCAATTTACAT+GGG | 0.632280 | 4.2:+36554052 | MS.gene057304:CDS |
| AAGTTTGAGAACCAAAGAGA+GGG | 0.633814 | 4.2:+36552870 | MS.gene057304:CDS |
| CTTTGGAGATGGATATGTGG+AGG | 0.648283 | 4.2:+36553750 | MS.gene057304:CDS |
| ATCGGATTACGGATTAGTCA+AGG | 0.648959 | 4.2:+36554441 | MS.gene057304:CDS |
| AATAGGTGCGAGCAATGTGA+CGG | 0.649705 | 4.2:-36553711 | None:intergenic |
| TTAGTCAAGGTAGATAGCAG+AGG | 0.651808 | 4.2:+36554454 | MS.gene057304:CDS |
| GTGGATGCAATAATCTCGCA+TGG | 0.664341 | 4.2:+36555514 | MS.gene057304:CDS |
| TAGTGTACAACACTCCATTG+TGG | 0.667376 | 4.2:+36555555 | MS.gene057304:CDS |
| ATTGCTTCTGAGCTAGCACA+GGG | 0.674782 | 4.2:+36555903 | MS.gene057304:CDS |
| AAATTGGTTTCAAGGAACAG+CGG | 0.676116 | 4.2:+36554028 | MS.gene057304:CDS |
| CTTGGTGAGAGAATCAAAGG+GGG | 0.681586 | 4.2:+36552808 | MS.gene057304:CDS |
| AAGGAACAGCGGATGCTGTG+AGG | 0.682609 | 4.2:+36554039 | MS.gene057304:CDS |
| AATCATTGAATACCTGCACA+AGG | 0.693249 | 4.2:-36554157 | None:intergenic |
| ATGAGCAACTGTATCAACAG+TGG | 0.701758 | 4.2:+36553640 | MS.gene057304:CDS |
| TCTTGGTGAGAGAATCAAAG+GGG | 0.719796 | 4.2:+36552807 | MS.gene057304:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTATGATCAAATT+AGG | - | chr4.2:36554795-36554814 | None:intergenic | 10.0% |
| !! | ATAAAAAAGGAAAAATTTAA+AGG | - | chr4.2:36554335-36554354 | None:intergenic | 10.0% |
| !! | CAAAAAAACATATATAAAAA+AGG | - | chr4.2:36554348-36554367 | None:intergenic | 10.0% |
| !!! | AAAATTTTGTTTTAAATGTT+AGG | - | chr4.2:36555834-36555853 | None:intergenic | 10.0% |
| !! | AAAAGAAATATAAGGTAAAA+GGG | - | chr4.2:36556167-36556186 | None:intergenic | 15.0% |
| !! | TAAAAGAAATATAAGGTAAA+AGG | - | chr4.2:36556168-36556187 | None:intergenic | 15.0% |
| !! | TCAAATGTAAAAGAAATATA+AGG | - | chr4.2:36556175-36556194 | None:intergenic | 15.0% |
| !!! | AAAAAATATTTTAACGCTTA+TGG | + | chr4.2:36553253-36553272 | MS.gene057304:intron | 15.0% |
| !!! | AATATTTTTCATCATGATAA+TGG | + | chr4.2:36552781-36552800 | MS.gene057304:CDS | 15.0% |
| !!! | CATAATATATTTATCTTTTC+TGG | + | chr4.2:36554803-36554822 | MS.gene057304:intron | 15.0% |
| !!! | CATTTAAAACAAAATTTTAC+AGG | + | chr4.2:36555836-36555855 | MS.gene057304:intron | 15.0% |
| !! | AAAAAAAATGCCTGAAAAAA+AGG | - | chr4.2:36555145-36555164 | None:intergenic | 20.0% |
| !! | AAAGAAATATAAGGTAAAAG+GGG | - | chr4.2:36556166-36556185 | None:intergenic | 20.0% |
| !! | AAATTTAGCTACATAATATC+AGG | - | chr4.2:36553309-36553328 | None:intergenic | 20.0% |
| !! | TACCAAAAAAAAACTTAAGA+GGG | + | chr4.2:36554721-36554740 | MS.gene057304:intron | 20.0% |
| !! | TTAACGAAATGTATTTGAAA+GGG | + | chr4.2:36554659-36554678 | MS.gene057304:intron | 20.0% |
| !! | TTACCAAAAAAAAACTTAAG+AGG | + | chr4.2:36554720-36554739 | MS.gene057304:intron | 20.0% |
| !! | TTGAACTTTCATAAATGTAT+AGG | - | chr4.2:36554538-36554557 | None:intergenic | 20.0% |
| !! | TTTAACGAAATGTATTTGAA+AGG | + | chr4.2:36554658-36554677 | MS.gene057304:intron | 20.0% |
| !! | TTTCATTATGTAATGTTACA+TGG | + | chr4.2:36553559-36553578 | MS.gene057304:intron | 20.0% |
| !!! | AATAATGTTAGTTTCATGAT+AGG | - | chr4.2:36555294-36555313 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTTTTTTGGTAAC+AGG | - | chr4.2:36554719-36554738 | None:intergenic | 20.0% |
| !!! | TTTTTTCAGGCATTTTTTTT+CGG | + | chr4.2:36555145-36555164 | MS.gene057304:intron | 20.0% |
| ! | AAAACAGTCTAACACTTTAA+AGG | - | chr4.2:36555072-36555091 | None:intergenic | 25.0% |
| ! | AAAACTTAAGAGGGTTATTA+TGG | + | chr4.2:36554730-36554749 | MS.gene057304:intron | 25.0% |
| ! | AAATGTATTTGAAAGGGTAA+CGG | + | chr4.2:36554665-36554684 | MS.gene057304:intron | 25.0% |
| ! | AACAAAGATTGATAAATGCA+GGG | + | chr4.2:36555397-36555416 | MS.gene057304:CDS | 25.0% |
| ! | AGAAAACACTGAAAATGAAA+TGG | - | chr4.2:36554214-36554233 | None:intergenic | 25.0% |
| ! | ATAACCATATAGCAAATTTG+AGG | + | chr4.2:36552752-36552771 | MS.gene057304:CDS | 25.0% |
| ! | ATCTTCATTACGTGAAAAAA+CGG | - | chr4.2:36554621-36554640 | None:intergenic | 25.0% |
| ! | ATGAATGTTCAATATTCTAC+AGG | - | chr4.2:36556038-36556057 | None:intergenic | 25.0% |
| ! | ATTAGGCAAAATACATTATG+CGG | - | chr4.2:36554778-36554797 | None:intergenic | 25.0% |
| ! | CATTGAGAATGTAATAATCT+TGG | + | chr4.2:36554100-36554119 | MS.gene057304:CDS | 25.0% |
| ! | CTTCAAAATCCTTTATATTG+CGG | + | chr4.2:36553094-36553113 | MS.gene057304:intron | 25.0% |
| ! | GGATCATAAAATTTGAACAA+TGG | - | chr4.2:36555338-36555357 | None:intergenic | 25.0% |
| ! | TATAAAGTAGCTTTCACATT+AGG | - | chr4.2:36553871-36553890 | None:intergenic | 25.0% |
| ! | TGATTCTTATGTTCTTATTG+TGG | + | chr4.2:36553350-36553369 | MS.gene057304:intron | 25.0% |
| !! | AAATCAAACACAATAGGTTT+TGG | + | chr4.2:36553974-36553993 | MS.gene057304:intron | 25.0% |
| !! | ATCATTTTACGATGCTAATA+TGG | + | chr4.2:36555198-36555217 | MS.gene057304:CDS | 25.0% |
| !! | GCTTTTATTCTCATAAATGA+TGG | - | chr4.2:36553400-36553419 | None:intergenic | 25.0% |
| !! | TGGTATTGTTTACATTTTTC+AGG | + | chr4.2:36553579-36553598 | MS.gene057304:intron | 25.0% |
| !! | TTTTCATAATTACTCCTTTG+TGG | + | chr4.2:36555088-36555107 | MS.gene057304:intron | 25.0% |
| !!! | AACCCTCTTAAGTTTTTTTT+TGG | - | chr4.2:36554726-36554745 | None:intergenic | 25.0% |
| !!! | ATTCAAATGCTTTGTTTGTA+GGG | + | chr4.2:36556262-36556281 | MS.gene057304:intron | 25.0% |
| !!! | ATTTTTTTTCGGAGACTATT+GGG | + | chr4.2:36555156-36555175 | MS.gene057304:CDS | 25.0% |
| !!! | CAAATTTGCTATATGGTTAT+TGG | - | chr4.2:36552752-36552771 | None:intergenic | 25.0% |
| !!! | TATAAAGGATTTTGAAGTCT+CGG | - | chr4.2:36553091-36553110 | None:intergenic | 25.0% |
| !!! | TTTTACTCAAGCTTCTAAAA+TGG | + | chr4.2:36554956-36554975 | MS.gene057304:CDS | 25.0% |
| AAAACCACCAACTAACAAAA+TGG | - | chr4.2:36556200-36556219 | None:intergenic | 30.0% | |
| AAATTATGGCCGCAATATAA+AGG | - | chr4.2:36553106-36553125 | None:intergenic | 30.0% | |
| AATATCAGGAACAAAGTCTT+CGG | - | chr4.2:36553295-36553314 | None:intergenic | 30.0% | |
| AATCTTGGAGATGTGAAAAT+GGG | - | chr4.2:36555368-36555387 | None:intergenic | 30.0% | |
| AGAAATTATGGTAGTTTACC+TGG | - | chr4.2:36555615-36555634 | None:intergenic | 30.0% | |
| ATCAGGAATCACAATTGTAA+TGG | + | chr4.2:36556327-36556346 | MS.gene057304:CDS | 30.0% | |
| ATCTTAATTCAAAACCACGA+CGG | - | chr4.2:36552985-36553004 | None:intergenic | 30.0% | |
| ATTCTCAATGTTAGTGTTCT+TGG | - | chr4.2:36554090-36554109 | None:intergenic | 30.0% | |
| CAACAAAGATTGATAAATGC+AGG | + | chr4.2:36555396-36555415 | MS.gene057304:CDS | 30.0% | |
| CATTTATCAATCTTTGTTGG+TGG | - | chr4.2:36555395-36555414 | None:intergenic | 30.0% | |
| CGAAATCAATAATGTCATGA+TGG | + | chr4.2:36553920-36553939 | MS.gene057304:intron | 30.0% | |
| CTGCATTTATCAATCTTTGT+TGG | - | chr4.2:36555398-36555417 | None:intergenic | 30.0% | |
| GCAATTAATGATTGACATTG+TGG | + | chr4.2:36555681-36555700 | MS.gene057304:intron | 30.0% | |
| GGTAAACTACCATAATTTCT+TGG | + | chr4.2:36555615-36555634 | MS.gene057304:intron | 30.0% | |
| GTTCAATATTCTACAGGTTA+TGG | - | chr4.2:36556032-36556051 | None:intergenic | 30.0% | |
| TCACCATATATTGCATCTAT+GGG | + | chr4.2:36554910-36554929 | MS.gene057304:CDS | 30.0% | |
| TCAGCTATAGTGGTAAAAAA+TGG | - | chr4.2:36553161-36553180 | None:intergenic | 30.0% | |
| TTACAATTGTGATTCCTGAT+CGG | - | chr4.2:36556327-36556346 | None:intergenic | 30.0% | |
| TTGATTTCGTTTCAAAACGT+TGG | - | chr4.2:36553909-36553928 | None:intergenic | 30.0% | |
| TTTGTATTGCGGAAAAATCT+TGG | + | chr4.2:36553030-36553049 | MS.gene057304:intron | 30.0% | |
| ! | AAATGTTGCTTCCATTGTAT+TGG | + | chr4.2:36553429-36553448 | MS.gene057304:CDS | 30.0% |
| ! | AATGTTGCTTCCATTGTATT+GGG | + | chr4.2:36553430-36553449 | MS.gene057304:CDS | 30.0% |
| ! | ACCTATTGTGTTTGATTTCA+CGG | - | chr4.2:36553972-36553991 | None:intergenic | 30.0% |
| ! | ATAGTGGAATTTCTCTTACT+TGG | - | chr4.2:36555047-36555066 | None:intergenic | 30.0% |
| ! | ATGTTAGTTTCATGATAGGA+AGG | - | chr4.2:36555290-36555309 | None:intergenic | 30.0% |
| ! | CAATTTTCGGAAAAACCTAA+GGG | + | chr4.2:36554487-36554506 | MS.gene057304:CDS | 30.0% |
| ! | CTACAAACAAAGCATTTGAA+TGG | - | chr4.2:36556263-36556282 | None:intergenic | 30.0% |
| ! | TAACACTTTAAAGGAGATAG+TGG | - | chr4.2:36555063-36555082 | None:intergenic | 30.0% |
| ! | TGTTAGTTTCATGATAGGAA+GGG | - | chr4.2:36555289-36555308 | None:intergenic | 30.0% |
| ! | TTATATTGCGGCCATAATTT+TGG | + | chr4.2:36553106-36553125 | MS.gene057304:intron | 30.0% |
| ! | TTTGAGTCCATTTTGTTAGT+TGG | + | chr4.2:36556190-36556209 | MS.gene057304:intron | 30.0% |
| ! | TTTTTCCGCAATACAAAAGT+TGG | - | chr4.2:36553027-36553046 | None:intergenic | 30.0% |
| !! | CATTCAAATGCTTTGTTTGT+AGG | + | chr4.2:36556261-36556280 | MS.gene057304:intron | 30.0% |
| !! | CTTTCCTCAAATTTGCTATA+TGG | - | chr4.2:36552759-36552778 | None:intergenic | 30.0% |
| !! | TTACTTGTTGTCTTTGTTGA+AGG | + | chr4.2:36556068-36556087 | MS.gene057304:intron | 30.0% |
| !!! | ACAATGGAAGCAACATTTTT+TGG | - | chr4.2:36553427-36553446 | None:intergenic | 30.0% |
| !!! | CAATGGAAGCAACATTTTTT+GGG | - | chr4.2:36553426-36553445 | None:intergenic | 30.0% |
| !!! | CATCATGATAATGGTTTTCT+TGG | + | chr4.2:36552790-36552809 | MS.gene057304:CDS | 30.0% |
| !!! | CATTTTTTTTCGGAGACTAT+TGG | + | chr4.2:36555155-36555174 | MS.gene057304:CDS | 30.0% |
| !!! | GTTTGTTTTGCCTTTTTTTC+AGG | + | chr4.2:36555132-36555151 | MS.gene057304:intron | 30.0% |
| !!! | TGGTTTTGAATTAAGATCGT+AGG | + | chr4.2:36552988-36553007 | MS.gene057304:intron | 30.0% |
| AAGTTTGAGAACCAAAGAGA+GGG | + | chr4.2:36552870-36552889 | MS.gene057304:CDS | 35.0% | |
| AATCATTCCTGCATCTGTTA+AGG | + | chr4.2:36555011-36555030 | MS.gene057304:CDS | 35.0% | |
| AATCATTGAATACCTGCACA+AGG | - | chr4.2:36554160-36554179 | None:intergenic | 35.0% | |
| ACCGTGAAATCAAACACAAT+AGG | + | chr4.2:36553968-36553987 | MS.gene057304:intron | 35.0% | |
| ACTCCCATAGATGCAATATA+TGG | - | chr4.2:36554916-36554935 | None:intergenic | 35.0% | |
| ATATCAGGAACAAAGTCTTC+GGG | - | chr4.2:36553294-36553313 | None:intergenic | 35.0% | |
| ATTGTCTTGGTTGACTAAAC+AGG | + | chr4.2:36553519-36553538 | MS.gene057304:intron | 35.0% | |
| CCTTGGATGATTAATCAGTT+GGG | + | chr4.2:36552844-36552863 | MS.gene057304:CDS | 35.0% | |
| CTGTGAGTAAATCATTGTCT+TGG | + | chr4.2:36553506-36553525 | MS.gene057304:intron | 35.0% | |
| GAATCTTGGAGATGTGAAAA+TGG | - | chr4.2:36555369-36555388 | None:intergenic | 35.0% | |
| GAGAATGTAATAATCTTGGC+TGG | + | chr4.2:36554104-36554123 | MS.gene057304:CDS | 35.0% | |
| GATTTCAGATCCAAAGTCAT+TGG | - | chr4.2:36554995-36555014 | None:intergenic | 35.0% | |
| GCAATTTACATGGGTATTTG+AGG | + | chr4.2:36554061-36554080 | MS.gene057304:CDS | 35.0% | |
| GGTACAGTGAAATAACTCAA+AGG | + | chr4.2:36554751-36554770 | MS.gene057304:intron | 35.0% | |
| GTATAATTGACAAGAATGCC+AGG | + | chr4.2:36556095-36556114 | MS.gene057304:CDS | 35.0% | |
| GTCACCATATATTGCATCTA+TGG | + | chr4.2:36554909-36554928 | MS.gene057304:CDS | 35.0% | |
| GTCTTCTTGTGTGAACTTTA+AGG | + | chr4.2:36552726-36552745 | MS.gene057304:CDS | 35.0% | |
| GTTGTACACTACATTCTCTA+AGG | - | chr4.2:36555546-36555565 | None:intergenic | 35.0% | |
| GTTTGACAATCCAAAAAGAG+AGG | - | chr4.2:36554875-36554894 | None:intergenic | 35.0% | |
| TAAGTTTGAGAACCAAAGAG+AGG | + | chr4.2:36552869-36552888 | MS.gene057304:CDS | 35.0% | |
| TAATATGGCTCTTACTGAAG+AGG | + | chr4.2:36555213-36555232 | MS.gene057304:CDS | 35.0% | |
| TACAAAGAGCAACTCAAACA+TGG | - | chr4.2:36555490-36555509 | None:intergenic | 35.0% | |
| TCAGAAACACATGACTATAG+AGG | - | chr4.2:36554829-36554848 | None:intergenic | 35.0% | |
| TCATAATTACTCCTTTGTGG+AGG | + | chr4.2:36555091-36555110 | MS.gene057304:intron | 35.0% | |
| TCCTTGGATGATTAATCAGT+TGG | + | chr4.2:36552843-36552862 | MS.gene057304:CDS | 35.0% | |
| TGGTGATCATCTATACAGAA+TGG | + | chr4.2:36554124-36554143 | MS.gene057304:CDS | 35.0% | |
| TGTCAAACCAAGATGCATTA+AGG | + | chr4.2:36554887-36554906 | MS.gene057304:CDS | 35.0% | |
| TTACAGGACACTGTAATGAT+GGG | + | chr4.2:36555852-36555871 | MS.gene057304:intron | 35.0% | |
| TTCTTGGTGAGAGAATCAAA+GGG | + | chr4.2:36552806-36552825 | MS.gene057304:CDS | 35.0% | |
| TTGGAAGTAACAGCAAAATC+AGG | + | chr4.2:36555943-36555962 | MS.gene057304:CDS | 35.0% | |
| TTGTATTGTTACCTCCACAA+AGG | - | chr4.2:36555105-36555124 | None:intergenic | 35.0% | |
| TTTACAGGACACTGTAATGA+TGG | + | chr4.2:36555851-36555870 | MS.gene057304:intron | 35.0% | |
| TTTCTTGGTGAGAGAATCAA+AGG | + | chr4.2:36552805-36552824 | MS.gene057304:CDS | 35.0% | |
| TTTGGAAATGGCATCAACTT+TGG | + | chr4.2:36553733-36553752 | MS.gene057304:CDS | 35.0% | |
| ! | AAATTGGTTTCAAGGAACAG+CGG | + | chr4.2:36554028-36554047 | MS.gene057304:CDS | 35.0% |
| ! | ATATGTGGAGGTATGTATCA+AGG | + | chr4.2:36553762-36553781 | MS.gene057304:intron | 35.0% |
| ! | CATAAATGATGGAACCTGAA+AGG | - | chr4.2:36553389-36553408 | None:intergenic | 35.0% |
| ! | CCAATTTTCGGAAAAACCTA+AGG | + | chr4.2:36554486-36554505 | MS.gene057304:CDS | 35.0% |
| ! | CCTTAGGTTTTTCCGAAAAT+TGG | - | chr4.2:36554489-36554508 | None:intergenic | 35.0% |
| ! | CTCTTTTGGTAAGAGGAAAA+AGG | - | chr4.2:36553474-36553493 | None:intergenic | 35.0% |
| ! | GTTGATGCCATTTCCAAAAT+AGG | - | chr4.2:36553731-36553750 | None:intergenic | 35.0% |
| ! | TTTTACCACTATAGCTGATG+TGG | + | chr4.2:36553163-36553182 | MS.gene057304:intron | 35.0% |
| !! | TACTCAAGCTTCTAAAATGG+AGG | + | chr4.2:36554959-36554978 | MS.gene057304:CDS | 35.0% |
| !! | TCAAACACAATAGGTTTTGG+CGG | + | chr4.2:36553977-36553996 | MS.gene057304:intron | 35.0% |
| !! | TCTATACAGAATGGACTACA+TGG | + | chr4.2:36554133-36554152 | MS.gene057304:CDS | 35.0% |
| !! | TTTGTTGGTGGTAAGAATCT+TGG | - | chr4.2:36555383-36555402 | None:intergenic | 35.0% |
| !!! | AGAACCAAGGTTTTAAACTG+AGG | + | chr4.2:36555651-36555670 | MS.gene057304:intron | 35.0% |
| !!! | TACATTTTTCAGGTACCTGT+TGG | + | chr4.2:36553589-36553608 | MS.gene057304:intron | 35.0% |
| AAATGATGCCGTTGAGACTA+AGG | + | chr4.2:36552936-36552955 | MS.gene057304:CDS | 40.0% | |
| AACCAAAGAGAGGGTTAAGA+AGG | + | chr4.2:36552879-36552898 | MS.gene057304:CDS | 40.0% | |
| AATGGAGAAAGCGACAATAG+AGG | + | chr4.2:36556345-36556364 | MS.gene057304:CDS | 40.0% | |
| AGATCCAAAGTCATTGGATG+TGG | - | chr4.2:36554989-36555008 | None:intergenic | 40.0% | |
| AGATGTGAAAATGGGTGTCT+TGG | - | chr4.2:36555360-36555379 | None:intergenic | 40.0% | |
| AGTGTACAACACTCCATTGT+GGG | + | chr4.2:36555556-36555575 | MS.gene057304:CDS | 40.0% | |
| AGTTCATTCTCTTGCCTCTT+GGG | + | chr4.2:36554565-36554584 | MS.gene057304:intron | 40.0% | |
| AGTTCTCGGCCAAGAAATTA+TGG | - | chr4.2:36555627-36555646 | None:intergenic | 40.0% | |
| ATGAGCAACTGTATCAACAG+TGG | + | chr4.2:36553640-36553659 | MS.gene057304:CDS | 40.0% | |
| ATGCTGTGAGGCAATTTACA+TGG | + | chr4.2:36554051-36554070 | MS.gene057304:CDS | 40.0% | |
| ATGGTGACCTTAATGCATCT+TGG | - | chr4.2:36554897-36554916 | None:intergenic | 40.0% | |
| ATTGACAAGAATGCCAGGAT+TGG | + | chr4.2:36556100-36556119 | MS.gene057304:CDS | 40.0% | |
| CATGAACAAAGATGTGAGCA+TGG | + | chr4.2:36556138-36556157 | MS.gene057304:intron | 40.0% | |
| CCCAACTGATTAATCATCCA+AGG | - | chr4.2:36552847-36552866 | None:intergenic | 40.0% | |
| CGGATGTAAAATCCATCTTC+TGG | - | chr4.2:36556307-36556326 | None:intergenic | 40.0% | |
| CTCAGAAGCAATTTCGGATT+CGG | - | chr4.2:36555895-36555914 | None:intergenic | 40.0% | |
| CTGTTGATACAGTTGCTCAT+TGG | - | chr4.2:36553640-36553659 | None:intergenic | 40.0% | |
| GAACGTTCACGTTTGGATTA+CGG | + | chr4.2:36555580-36555599 | MS.gene057304:CDS | 40.0% | |
| GACAATGATTTACTCACAGC+AGG | - | chr4.2:36553505-36553524 | None:intergenic | 40.0% | |
| GACTAAACAGGCATCAGTTA+TGG | + | chr4.2:36553531-36553550 | MS.gene057304:intron | 40.0% | |
| GAGTTGCTCTTTGTAGATTG+TGG | + | chr4.2:36555495-36555514 | MS.gene057304:intron | 40.0% | |
| GATCCAAAGTCATTGGATGT+GGG | - | chr4.2:36554988-36555007 | None:intergenic | 40.0% | |
| GATGTGAAAATGGGTGTCTT+GGG | - | chr4.2:36555359-36555378 | None:intergenic | 40.0% | |
| GTGGTAAAAAATGGATCCCA+TGG | - | chr4.2:36553152-36553171 | None:intergenic | 40.0% | |
| GTGGTCCACAACCAAAATTA+TGG | - | chr4.2:36553120-36553139 | None:intergenic | 40.0% | |
| TAGTGTACAACACTCCATTG+TGG | + | chr4.2:36555555-36555574 | MS.gene057304:CDS | 40.0% | |
| TAGTTCATTCTCTTGCCTCT+TGG | + | chr4.2:36554564-36554583 | MS.gene057304:intron | 40.0% | |
| TATCCCACATCCAATGACTT+TGG | + | chr4.2:36554982-36555001 | MS.gene057304:CDS | 40.0% | |
| TCAAATCAAACCCTAAGGCT+TGG | + | chr4.2:36555781-36555800 | MS.gene057304:intron | 40.0% | |
| TCAGCTTACCTTAGTCTCAA+CGG | - | chr4.2:36552947-36552966 | None:intergenic | 40.0% | |
| TCTTGGTGAGAGAATCAAAG+GGG | + | chr4.2:36552807-36552826 | MS.gene057304:CDS | 40.0% | |
| TGCTAGCTCAGAAGCAATTT+CGG | - | chr4.2:36555901-36555920 | None:intergenic | 40.0% | |
| TGCTGTGAGGCAATTTACAT+GGG | + | chr4.2:36554052-36554071 | MS.gene057304:CDS | 40.0% | |
| TTAGTCAAGGTAGATAGCAG+AGG | + | chr4.2:36554454-36554473 | MS.gene057304:CDS | 40.0% | |
| TTGACAAGAATGCCAGGATT+GGG | + | chr4.2:36556101-36556120 | MS.gene057304:CDS | 40.0% | |
| TTGCATTCCTTAACAGATGC+AGG | - | chr4.2:36555021-36555040 | None:intergenic | 40.0% | |
| ! | AAGCAATTTCGGATTCGGTT+TGG | - | chr4.2:36555890-36555909 | None:intergenic | 40.0% |
| ! | AATGGCATCAACTTTGGAGA+TGG | + | chr4.2:36553739-36553758 | MS.gene057304:CDS | 40.0% |
| ! | AGGTCGCATCATCCAATTTT+CGG | + | chr4.2:36554474-36554493 | MS.gene057304:CDS | 40.0% |
| ! | CAACTTTGGAGATGGATATG+TGG | + | chr4.2:36553747-36553766 | MS.gene057304:CDS | 40.0% |
| ! | CAAGCAGATACCTCTCTTTT+TGG | + | chr4.2:36554862-36554881 | MS.gene057304:CDS | 40.0% |
| ! | CAAGGTTTTTGATGTCTCAG+CGG | - | chr4.2:36555751-36555770 | None:intergenic | 40.0% |
| ! | CACTGCCAACTTTTGTATTG+CGG | + | chr4.2:36553019-36553038 | MS.gene057304:intron | 40.0% |
| ! | CTGTTACTTCCAATCCCAAT+AGG | - | chr4.2:36555936-36555955 | None:intergenic | 40.0% |
| ! | GAGTCCATTTTGTTAGTTGG+TGG | + | chr4.2:36556193-36556212 | MS.gene057304:intron | 40.0% |
| ! | GATTTAAGATCAGCACCCTT+AGG | - | chr4.2:36554505-36554524 | None:intergenic | 40.0% |
| ! | GCTACCTCAGTTTAAAACCT+TGG | - | chr4.2:36555658-36555677 | None:intergenic | 40.0% |
| ! | GCTGGGAAAAATTGGTTTCA+AGG | + | chr4.2:36554020-36554039 | MS.gene057304:CDS | 40.0% |
| ! | GGACCACAGTTTAAAACCAT+GGG | + | chr4.2:36553133-36553152 | MS.gene057304:intron | 40.0% |
| ! | TGGACCACAGTTTAAAACCA+TGG | + | chr4.2:36553132-36553151 | MS.gene057304:intron | 40.0% |
| !! | AGTTTTCTAGCCAAGCCTTA+GGG | - | chr4.2:36555794-36555813 | None:intergenic | 40.0% |
| !! | ATCGGATTACGGATTAGTCA+AGG | + | chr4.2:36554441-36554460 | MS.gene057304:CDS | 40.0% |
| !! | CCTTGGTTCTATAGAGTTCT+CGG | - | chr4.2:36555641-36555660 | None:intergenic | 40.0% |
| !! | GATGGATTTTACATCCGATC+AGG | + | chr4.2:36556310-36556329 | MS.gene057304:CDS | 40.0% |
| !! | GGGTGCTGATCTTAAATCAA+TGG | + | chr4.2:36554507-36554526 | MS.gene057304:CDS | 40.0% |
| !! | TAGTTTTCTAGCCAAGCCTT+AGG | - | chr4.2:36555795-36555814 | None:intergenic | 40.0% |
| !!! | ATTTTTCAGGTACCTGTTGG+TGG | + | chr4.2:36553592-36553611 | MS.gene057304:intron | 40.0% |
| !!! | CGCGAACGTTTTAAGACTTA+AGG | + | chr4.2:36554688-36554707 | MS.gene057304:intron | 40.0% |
| !!! | GATCCCATGGTTTTAAACTG+TGG | - | chr4.2:36553139-36553158 | None:intergenic | 40.0% |
| !!! | TTTTTCAGGTACCTGTTGGT+GGG | + | chr4.2:36553593-36553612 | MS.gene057304:intron | 40.0% |
| AATAGGTGCGAGCAATGTGA+CGG | - | chr4.2:36553714-36553733 | None:intergenic | 45.0% | |
| AATTGCTTCTGAGCTAGCAC+AGG | + | chr4.2:36555902-36555921 | MS.gene057304:CDS | 45.0% | |
| AGAGGAAAAAGGTGAACACC+AGG | - | chr4.2:36553463-36553482 | None:intergenic | 45.0% | |
| AGGTAAGCTGAATCATGTCG+AGG | + | chr4.2:36552956-36552975 | MS.gene057304:intron | 45.0% | |
| ATGGCTCTTACTGAAGAGGT+AGG | + | chr4.2:36555217-36555236 | MS.gene057304:intron | 45.0% | |
| ATTGCTTCTGAGCTAGCACA+GGG | + | chr4.2:36555903-36555922 | MS.gene057304:CDS | 45.0% | |
| CACAGGGAAAGGTTCCTATT+GGG | + | chr4.2:36555919-36555938 | MS.gene057304:CDS | 45.0% | |
| CACGACTGAAAAACAGGCAA+TGG | - | chr4.2:36554420-36554439 | None:intergenic | 45.0% | |
| CAGGAGAAGCTGGGAAAAAT+TGG | + | chr4.2:36554012-36554031 | MS.gene057304:CDS | 45.0% | |
| CCGAGAACTCTATAGAACCA+AGG | + | chr4.2:36555638-36555657 | MS.gene057304:intron | 45.0% | |
| CGGAAAAATCTTGGAAAGCG+CGG | + | chr4.2:36553039-36553058 | MS.gene057304:intron | 45.0% | |
| CTTGGTGAGAGAATCAAAGG+GGG | + | chr4.2:36552808-36552827 | MS.gene057304:CDS | 45.0% | |
| GAAGCAGATAGACCAGAAGA+TGG | + | chr4.2:36556292-36556311 | MS.gene057304:CDS | 45.0% | |
| GAGATCTAGTGCAGCTAATG+CGG | + | chr4.2:36555710-36555729 | MS.gene057304:intron | 45.0% | |
| GATGACATCTTTCCCAATCC+TGG | - | chr4.2:36556116-36556135 | None:intergenic | 45.0% | |
| GCAGCTCAAATCAAACCCTA+AGG | + | chr4.2:36555776-36555795 | MS.gene057304:intron | 45.0% | |
| GGAAAGGTTCCTATTGGGAT+TGG | + | chr4.2:36555924-36555943 | MS.gene057304:CDS | 45.0% | |
| GGAGACTATTGGGAAGACAT+TGG | + | chr4.2:36555166-36555185 | MS.gene057304:CDS | 45.0% | |
| GGGGTGTGAATTATAGTCCT+TGG | + | chr4.2:36552827-36552846 | MS.gene057304:CDS | 45.0% | |
| GGTAAGCTGAATCATGTCGA+GGG | + | chr4.2:36552957-36552976 | MS.gene057304:intron | 45.0% | |
| GTAAGCTGAATCATGTCGAG+GGG | + | chr4.2:36552958-36552977 | MS.gene057304:intron | 45.0% | |
| GTGGATGCAATAATCTCGCA+TGG | + | chr4.2:36555514-36555533 | MS.gene057304:CDS | 45.0% | |
| GTGTCAACTTCAGACCTTTC+AGG | + | chr4.2:36553372-36553391 | MS.gene057304:intron | 45.0% | |
| GTTGCTTCCATTGTATTGGG+AGG | + | chr4.2:36553433-36553452 | MS.gene057304:CDS | 45.0% | |
| TATGCGAACATGTTCCCAAG+AGG | - | chr4.2:36554582-36554601 | None:intergenic | 45.0% | |
| TCTTGGGAACATGTTCGCAT+AGG | + | chr4.2:36554581-36554600 | MS.gene057304:intron | 45.0% | |
| TGATTTGAGCTGCAACGTCA+AGG | - | chr4.2:36555769-36555788 | None:intergenic | 45.0% | |
| TTCAGTCGTGCATCGGATTA+CGG | + | chr4.2:36554430-36554449 | MS.gene057304:intron | 45.0% | |
| ! | ACAGTATCATGTGCTGCTGT+TGG | + | chr4.2:36554285-36554304 | MS.gene057304:CDS | 45.0% |
| ! | CAATTTTTCCCAGCTTCTCC+TGG | - | chr4.2:36554014-36554033 | None:intergenic | 45.0% |
| ! | CACATTGCTCGCACCTATTT+TGG | + | chr4.2:36553715-36553734 | MS.gene057304:CDS | 45.0% |
| ! | CTTTGGAGATGGATATGTGG+AGG | + | chr4.2:36553750-36553769 | MS.gene057304:CDS | 45.0% |
| ! | GTAGCAGCTCTTTTGGTAAG+AGG | - | chr4.2:36553481-36553500 | None:intergenic | 45.0% |
| !! | CCTGTTTTTCAGTCGTGCAT+CGG | + | chr4.2:36554423-36554442 | MS.gene057304:intron | 45.0% |
| !! | GCTCGCACCTATTTTGGAAA+TGG | + | chr4.2:36553721-36553740 | MS.gene057304:CDS | 45.0% |
| !!! | TGCGGCCATAATTTTGGTTG+TGG | + | chr4.2:36553112-36553131 | MS.gene057304:intron | 45.0% |
| ACGTGAACGTTCACCCACAA+TGG | - | chr4.2:36555572-36555591 | None:intergenic | 50.0% | |
| AGAACAGCAGACACAACACC+AGG | - | chr4.2:36552910-36552929 | None:intergenic | 50.0% | |
| AGCAGACACAACACCAGGTT+TGG | - | chr4.2:36552905-36552924 | None:intergenic | 50.0% | |
| AGGACCTCCTCCCAATACAA+TGG | - | chr4.2:36553443-36553462 | None:intergenic | 50.0% | |
| AGGGTTAAGAAGGCCAAACC+TGG | + | chr4.2:36552889-36552908 | MS.gene057304:CDS | 50.0% | |
| ATTGTATTGGGAGGAGGTCC+TGG | + | chr4.2:36553442-36553461 | MS.gene057304:CDS | 50.0% | |
| CCGATGCACGACTGAAAAAC+AGG | - | chr4.2:36554426-36554445 | None:intergenic | 50.0% | |
| GCACAGGGAAAGGTTCCTAT+TGG | + | chr4.2:36555918-36555937 | MS.gene057304:CDS | 50.0% | |
| GCTTCCATTGTATTGGGAGG+AGG | + | chr4.2:36553436-36553455 | MS.gene057304:CDS | 50.0% | |
| GGCCTTCTTAACCCTCTCTT+TGG | - | chr4.2:36552884-36552903 | None:intergenic | 50.0% | |
| TGCAGCCACATCAGCTATAG+TGG | - | chr4.2:36553171-36553190 | None:intergenic | 50.0% | |
| TGTGGGTGAACGTTCACGTT+TGG | + | chr4.2:36555573-36555592 | MS.gene057304:CDS | 50.0% | |
| TTCTGAGCTAGCACAGGGAA+AGG | + | chr4.2:36555908-36555927 | MS.gene057304:CDS | 50.0% | |
| ! | AGCAGGTGTAGCAGCTCTTT+TGG | - | chr4.2:36553488-36553507 | None:intergenic | 50.0% |
| ! | TACCTGTTGGTGGGTGCTAT+AGG | + | chr4.2:36553602-36553621 | MS.gene057304:CDS | 50.0% |
| AAGGAACAGCGGATGCTGTG+AGG | + | chr4.2:36554039-36554058 | MS.gene057304:CDS | 55.0% | |
| ACTCAAACGCCAGGAGAAGC+TGG | + | chr4.2:36554002-36554021 | MS.gene057304:CDS | 55.0% | |
| AGCCTATAGCACCCACCAAC+AGG | - | chr4.2:36553607-36553626 | None:intergenic | 55.0% | |
| AGCTGATGTGGCTGCAACTG+CGG | + | chr4.2:36553175-36553194 | MS.gene057304:intron | 55.0% | |
| CTCAAACGCCAGGAGAAGCT+GGG | + | chr4.2:36554003-36554022 | MS.gene057304:CDS | 55.0% | |
| GGACTACATGGACCTTGTGC+AGG | + | chr4.2:36554145-36554164 | MS.gene057304:CDS | 55.0% | |
| ! | GGATTACGGTGTTGAGCTCC+AGG | + | chr4.2:36555594-36555613 | MS.gene057304:CDS | 55.0% |
| !! | CATGTGCTGCTGTTGGTGAC+AGG | + | chr4.2:36554292-36554311 | MS.gene057304:CDS | 55.0% |
| TTGGCGGCTACTCAAACGCC+AGG | + | chr4.2:36553993-36554012 | MS.gene057304:CDS | 60.0% | |
| TCATGTCGAGGGGTCCGTCG+TGG | + | chr4.2:36552968-36552987 | MS.gene057304:intron | 65.0% | |
| TGTGGCTGCAACTGCGGTCG+CGG | + | chr4.2:36553181-36553200 | MS.gene057304:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 36552721 | 36556384 | 36552721 | ID=MS.gene057304 |
| chr4.2 | mRNA | 36552721 | 36556384 | 36552721 | ID=MS.gene057304.t1;Parent=MS.gene057304 |
| chr4.2 | exon | 36552721 | 36552957 | 36552721 | ID=MS.gene057304.t1.exon1;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36552721 | 36552957 | 36552721 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36553385 | 36553507 | 36553385 | ID=MS.gene057304.t1.exon2;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36553385 | 36553507 | 36553385 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36553601 | 36553771 | 36553601 | ID=MS.gene057304.t1.exon3;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36553601 | 36553771 | 36553601 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36553990 | 36554166 | 36553990 | ID=MS.gene057304.t1.exon4;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36553990 | 36554166 | 36553990 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36554258 | 36554313 | 36554258 | ID=MS.gene057304.t1.exon5;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36554258 | 36554313 | 36554258 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36554435 | 36554528 | 36554435 | ID=MS.gene057304.t1.exon6;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36554435 | 36554528 | 36554435 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36554862 | 36555047 | 36554862 | ID=MS.gene057304.t1.exon7;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36554862 | 36555047 | 36554862 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36555154 | 36555234 | 36555154 | ID=MS.gene057304.t1.exon8;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36555154 | 36555234 | 36555154 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36555332 | 36555418 | 36555332 | ID=MS.gene057304.t1.exon9;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36555332 | 36555418 | 36555332 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36555511 | 36555615 | 36555511 | ID=MS.gene057304.t1.exon10;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36555511 | 36555615 | 36555511 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36555858 | 36555964 | 36555858 | ID=MS.gene057304.t1.exon11;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36555858 | 36555964 | 36555858 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36556090 | 36556150 | 36556090 | ID=MS.gene057304.t1.exon12;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36556090 | 36556150 | 36556090 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| chr4.2 | exon | 36556283 | 36556384 | 36556283 | ID=MS.gene057304.t1.exon13;Parent=MS.gene057304.t1 |
| chr4.2 | CDS | 36556283 | 36556384 | 36556283 | ID=cds.MS.gene057304.t1;Parent=MS.gene057304.t1 |
| Gene Sequence |
| Protein sequence |
