Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23843.t1 | XP_003629056.1 | 98.4 | 257 | 4 | 0 | 5 | 261 | 327 | 583 | 1.20E-131 | 479.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23843.t1 | P29057 | 89.5 | 257 | 27 | 0 | 5 | 261 | 319 | 575 | 2.0e-122 | 439.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23843.t1 | A9YVC5 | 98.4 | 257 | 4 | 0 | 5 | 261 | 327 | 583 | 8.9e-132 | 479.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene23843 | 0.800799 | 1.22E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23843.t1 | MTR_8g072640 | 98.444 | 257 | 4 | 0 | 5 | 261 | 327 | 583 | 0.0 | 515 |
| MS.gene23843.t1 | MTR_5g091050 | 91.829 | 257 | 21 | 0 | 5 | 261 | 289 | 545 | 2.78e-172 | 486 |
| MS.gene23843.t1 | MTR_5g026430 | 91.051 | 257 | 23 | 0 | 5 | 261 | 286 | 542 | 1.11e-171 | 485 |
| MS.gene23843.t1 | MTR_5g026500 | 91.051 | 257 | 23 | 0 | 5 | 261 | 294 | 550 | 2.50e-171 | 484 |
| MS.gene23843.t1 | MTR_5g026450 | 90.661 | 257 | 24 | 0 | 5 | 261 | 286 | 542 | 4.30e-171 | 483 |
| MS.gene23843.t1 | MTR_5g026460 | 90.661 | 257 | 24 | 0 | 5 | 261 | 286 | 542 | 4.30e-171 | 483 |
| MS.gene23843.t1 | MTR_5g026480 | 90.661 | 257 | 24 | 0 | 5 | 261 | 286 | 542 | 4.30e-171 | 483 |
| MS.gene23843.t1 | MTR_5g024880 | 91.051 | 257 | 23 | 0 | 5 | 261 | 311 | 567 | 2.73e-170 | 482 |
| MS.gene23843.t1 | MTR_5g087550 | 86.770 | 257 | 34 | 0 | 5 | 261 | 309 | 565 | 1.88e-154 | 442 |
| MS.gene23843.t1 | MTR_5g024880 | 92.135 | 178 | 14 | 0 | 5 | 182 | 311 | 488 | 3.70e-117 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23843.t1 | AT1G76490 | 88.538 | 253 | 29 | 0 | 5 | 257 | 380 | 632 | 5.96e-160 | 459 |
| MS.gene23843.t1 | AT2G17370 | 84.127 | 252 | 38 | 1 | 5 | 256 | 305 | 554 | 7.21e-151 | 432 |
Find 78 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGCTCACGAAACGATTT+TGG | 0.210048 | 8.4:-31447247 | None:intergenic |
| TCAGCCCTTGCTGGTGCTCT+TGG | 0.329249 | 8.4:+31446549 | MS.gene23843:CDS |
| AGAAAGCGGCAGCTGTAAAC+TGG | 0.347224 | 8.4:+31446403 | MS.gene23843:CDS |
| TCTTAATTTACTTGGTGTTA+AGG | 0.349199 | 8.4:+31447068 | MS.gene23843:CDS |
| AGCATTCAGCCTACAATTGC+TGG | 0.351295 | 8.4:+31446102 | MS.gene23843:CDS |
| CTTAATTTACTTGGTGTTAA+GGG | 0.362558 | 8.4:+31447069 | MS.gene23843:CDS |
| CTATTGGCCACCATTGTTGC+CGG | 0.367634 | 8.4:+31447126 | MS.gene23843:CDS |
| AAATTCTTGCCAGCAATTGT+AGG | 0.370194 | 8.4:-31446111 | None:intergenic |
| CCCTTGCTGGTGCTCTTGGT+GGG | 0.400026 | 8.4:+31446553 | MS.gene23843:CDS |
| AACATGCTTAAGAACCTAAC+TGG | 0.404216 | 8.4:+31446525 | MS.gene23843:CDS |
| ATTCGATTCCGTTGCAGTAC+TGG | 0.409002 | 8.4:+31446138 | MS.gene23843:CDS |
| TACAGCTGCCGCTTTCTTGT+CGG | 0.410250 | 8.4:-31446397 | None:intergenic |
| GCCCTTGCTGGTGCTCTTGG+TGG | 0.414829 | 8.4:+31446552 | MS.gene23843:CDS |
| CTAACTGGATCAGCCCTTGC+TGG | 0.430519 | 8.4:+31446540 | MS.gene23843:CDS |
| AAGGTCCTTGCCATCATTCA+CGG | 0.439029 | 8.4:-31446679 | None:intergenic |
| ATGGATGTCATTGGAATCTC+AGG | 0.445773 | 8.4:+31446237 | MS.gene23843:CDS |
| TCAGCTTGTCTTAATTTACT+TGG | 0.448427 | 8.4:+31447060 | MS.gene23843:CDS |
| GCAGCTGTAAACTGGATTGA+AGG | 0.457544 | 8.4:+31446411 | MS.gene23843:CDS |
| CAGCAAGGGCTGATCCAGTT+AGG | 0.457590 | 8.4:-31446539 | None:intergenic |
| CTCATGTCTGCAATTGCAGC+TGG | 0.470089 | 8.4:+31447174 | MS.gene23843:CDS |
| ACAATTTAATGGGTTTGTGC+AGG | 0.474671 | 8.4:+31446055 | None:intergenic |
| ATTCCAATGACATCCATGTC+AGG | 0.476477 | 8.4:-31446231 | None:intergenic |
| CTCGCCCGCAAGTACTGAAC+CGG | 0.478826 | 8.4:-31447145 | None:intergenic |
| CACTAATTTCTGTACCTCAA+TGG | 0.486090 | 8.4:-31446724 | None:intergenic |
| TCAGGTTGGTACTGTGGGAG+GGG | 0.488097 | 8.4:+31447017 | MS.gene23843:intron |
| ATAATTCAGGTTGGTACTGT+GGG | 0.489921 | 8.4:+31447012 | MS.gene23843:intron |
| TTCCCTGACATGGATGTCAT+TGG | 0.494706 | 8.4:+31446228 | MS.gene23843:CDS |
| TGCACCTGGAGATTCTGTGC+TGG | 0.497072 | 8.4:-31447094 | None:intergenic |
| AGGTGCAAATGCTAGGCTAT+TGG | 0.497308 | 8.4:+31447110 | MS.gene23843:CDS |
| ATCATTCACGGGTTCCATCA+TGG | 0.517111 | 8.4:-31446667 | None:intergenic |
| TGTCACCATGCCTTCCATTG+AGG | 0.519547 | 8.4:+31446710 | MS.gene23843:CDS |
| GGTGTGTGAGGCTGTTATTA+AGG | 0.520587 | 8.4:+31446449 | MS.gene23843:CDS |
| GAACTCTCAACATTCTGAGC+AGG | 0.528481 | 8.4:-31446633 | None:intergenic |
| TGCAGTACTGGTGATGCCAT+GGG | 0.530758 | 8.4:+31446150 | MS.gene23843:CDS |
| AATCTCCAGGTGCAAATGCT+AGG | 0.530949 | 8.4:+31447103 | MS.gene23843:CDS |
| TGTCTACATAGCCACTGGTC+AGG | 0.531826 | 8.4:+31446608 | MS.gene23843:CDS |
| GAAGACTAGTGTGGAGGCAC+TGG | 0.533947 | 8.4:+31446494 | MS.gene23843:CDS |
| GGCGCCAGCACAGAATCTCC+AGG | 0.540230 | 8.4:+31447090 | MS.gene23843:CDS |
| TGAAATACAACAGATCTAGC+AGG | 0.545624 | 8.4:+31447217 | MS.gene23843:CDS |
| TTCAGGTTGGTACTGTGGGA+GGG | 0.548296 | 8.4:+31447016 | MS.gene23843:intron |
| AGGTCCTTGCCATCATTCAC+GGG | 0.549056 | 8.4:-31446678 | None:intergenic |
| TTGCAGTACTGGTGATGCCA+TGG | 0.550722 | 8.4:+31446149 | MS.gene23843:CDS |
| TCAGAGTGACTTCCCTGACA+TGG | 0.551867 | 8.4:+31446218 | MS.gene23843:CDS |
| TGTTGCCGGTTCAGTACTTG+CGG | 0.552683 | 8.4:+31447140 | MS.gene23843:CDS |
| TTCTCACTGTATTACCATGA+TGG | 0.554608 | 8.4:+31446653 | MS.gene23843:CDS |
| TCTGCTGTCTACATAGCCAC+TGG | 0.555493 | 8.4:+31446603 | MS.gene23843:CDS |
| ATTCAGGTTGGTACTGTGGG+AGG | 0.563884 | 8.4:+31447015 | MS.gene23843:intron |
| AATAATTCAGGTTGGTACTG+TGG | 0.566379 | 8.4:+31447011 | MS.gene23843:intron |
| TGACACCATGTTCATCCCCA+TGG | 0.567983 | 8.4:-31446166 | None:intergenic |
| CAGGTTGGTACTGTGGGAGG+GGG | 0.569796 | 8.4:+31447018 | MS.gene23843:intron |
| ATGATGGAACCCGTGAATGA+TGG | 0.569819 | 8.4:+31446669 | MS.gene23843:CDS |
| CCCACCAAGAGCACCAGCAA+GGG | 0.572086 | 8.4:-31446553 | None:intergenic |
| CAGCTGTAAACTGGATTGAA+GGG | 0.573658 | 8.4:+31446412 | MS.gene23843:CDS |
| CTGTACCTCAATGGAAGGCA+TGG | 0.573863 | 8.4:-31446715 | None:intergenic |
| GTTGCCGGTTCAGTACTTGC+GGG | 0.581507 | 8.4:+31447141 | MS.gene23843:CDS |
| AATTTCTGTACCTCAATGGA+AGG | 0.582480 | 8.4:-31446720 | None:intergenic |
| GGCTGTTATTAAGGAAGAGG+TGG | 0.590912 | 8.4:+31446458 | MS.gene23843:CDS |
| AAGTACTGAACCGGCAACAA+TGG | 0.594121 | 8.4:-31447136 | None:intergenic |
| GAAAGTGTTGAAGACTAGTG+TGG | 0.595958 | 8.4:+31446485 | MS.gene23843:CDS |
| TGAGGCTGTTATTAAGGAAG+AGG | 0.596038 | 8.4:+31446455 | MS.gene23843:CDS |
| GGGATGAACATGGTGTCAAA+AGG | 0.598387 | 8.4:+31446171 | MS.gene23843:CDS |
| TACTGAACCGGCAACAATGG+TGG | 0.608927 | 8.4:-31447133 | None:intergenic |
| AGTCACTCTGAAGAAAATCA+AGG | 0.609778 | 8.4:-31446206 | None:intergenic |
| AATAGCCTAGCATTTGCACC+TGG | 0.614511 | 8.4:-31447108 | None:intergenic |
| GTAAACTGGATTGAAGGGCG+TGG | 0.616240 | 8.4:+31446417 | MS.gene23843:CDS |
| TGATGCCATGGGGATGAACA+TGG | 0.618362 | 8.4:+31446161 | MS.gene23843:CDS |
| TTCCAATGACATCCATGTCA+GGG | 0.618523 | 8.4:-31446230 | None:intergenic |
| TTTCTGTTCCGACAAGAAAG+CGG | 0.619756 | 8.4:+31446389 | MS.gene23843:CDS |
| GCATGGTGACAGAAATGTGA+AGG | 0.628287 | 8.4:-31446698 | None:intergenic |
| GAAATACAACAGATCTAGCA+GGG | 0.634441 | 8.4:+31447218 | MS.gene23843:CDS |
| ACCCACCAAGAGCACCAGCA+AGG | 0.640374 | 8.4:-31446554 | None:intergenic |
| TGGCATCACCAGTACTGCAA+CGG | 0.640383 | 8.4:-31446146 | None:intergenic |
| TGGTAAGTCTGTGGTGTGTG+AGG | 0.646294 | 8.4:+31446437 | MS.gene23843:CDS |
| GGAACCCGTGAATGATGGCA+AGG | 0.672840 | 8.4:+31446674 | MS.gene23843:CDS |
| TGAAGGGCGTGGTAAGTCTG+TGG | 0.674377 | 8.4:+31446428 | MS.gene23843:CDS |
| CTGAGCAGGATCCTGACCAG+TGG | 0.691176 | 8.4:-31446619 | None:intergenic |
| AGTGTTGAAGACTAGTGTGG+AGG | 0.700194 | 8.4:+31446488 | MS.gene23843:CDS |
| GCAGTACTGGTGATGCCATG+GGG | 0.721193 | 8.4:+31446151 | MS.gene23843:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTTTATTTAATTCCAAA+GGG | - | chr8.4:31446752-31446771 | None:intergenic | 15.0% |
| !! | TTATGTTTATTTAATTCCAA+AGG | - | chr8.4:31446753-31446772 | None:intergenic | 15.0% |
| !!! | TAGATTTTGTTTAATAATTC+AGG | + | chr8.4:31446999-31447018 | MS.gene23843:intron | 15.0% |
| !! | ATATTTATAAGCAAGTTTAG+GGG | + | chr8.4:31446917-31446936 | MS.gene23843:intron | 20.0% |
| !! | CATATTTATAAGCAAGTTTA+GGG | + | chr8.4:31446916-31446935 | MS.gene23843:intron | 20.0% |
| !! | TATTAAACAAAATCTAGCTA+AGG | - | chr8.4:31446995-31447014 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAATAATTCAGGT+TGG | + | chr8.4:31447003-31447022 | MS.gene23843:intron | 20.0% |
| ! | GCATATTTATAAGCAAGTTT+AGG | + | chr8.4:31446915-31446934 | MS.gene23843:intron | 25.0% |
| ! | TAGCTAAGGATACAATAAAA+TGG | - | chr8.4:31446981-31447000 | None:intergenic | 25.0% |
| !! | TTTTCTACTACATGTATGTT+TGG | - | chr8.4:31446824-31446843 | None:intergenic | 25.0% |
| !!! | CTTAATTTACTTGGTGTTAA+GGG | + | chr8.4:31447069-31447088 | MS.gene23843:CDS | 25.0% |
| !!! | TCTTAATTTACTTGGTGTTA+AGG | + | chr8.4:31447068-31447087 | MS.gene23843:CDS | 25.0% |
| AATTCAACCATAACAAGGAA+CGG | - | chr8.4:31446315-31446334 | None:intergenic | 30.0% | |
| CTTTCAATTCAACCATAACA+AGG | - | chr8.4:31446320-31446339 | None:intergenic | 30.0% | |
| TCAGCTTGTCTTAATTTACT+TGG | + | chr8.4:31447060-31447079 | MS.gene23843:CDS | 30.0% | |
| TTGAAAAAGAAAACCATGCT+CGG | - | chr8.4:31446879-31446898 | None:intergenic | 30.0% | |
| ! | AATGTTTTCATGCACACTAT+TGG | + | chr8.4:31446348-31446367 | MS.gene23843:intron | 30.0% |
| AAATTCTTGCCAGCAATTGT+AGG | - | chr8.4:31446114-31446133 | None:intergenic | 35.0% | |
| AACATGCTTAAGAACCTAAC+TGG | + | chr8.4:31446525-31446544 | MS.gene23843:CDS | 35.0% | |
| AATTTCTGTACCTCAATGGA+AGG | - | chr8.4:31446723-31446742 | None:intergenic | 35.0% | |
| CACTAATTTCTGTACCTCAA+TGG | - | chr8.4:31446727-31446746 | None:intergenic | 35.0% | |
| CATTGAGGTACAGAAATTAG+TGG | + | chr8.4:31446725-31446744 | MS.gene23843:intron | 35.0% | |
| GAAATACAACAGATCTAGCA+GGG | + | chr8.4:31447218-31447237 | MS.gene23843:CDS | 35.0% | |
| TGAAATACAACAGATCTAGC+AGG | + | chr8.4:31447217-31447236 | MS.gene23843:CDS | 35.0% | |
| TTAGGGGAGCTAAATTGAAA+GGG | + | chr8.4:31446933-31446952 | MS.gene23843:intron | 35.0% | |
| TTCTCACTGTATTACCATGA+TGG | + | chr8.4:31446653-31446672 | MS.gene23843:CDS | 35.0% | |
| TTTAGGGGAGCTAAATTGAA+AGG | + | chr8.4:31446932-31446951 | MS.gene23843:intron | 35.0% | |
| ! | AGTCACTCTGAAGAAAATCA+AGG | - | chr8.4:31446209-31446228 | None:intergenic | 35.0% |
| ! | TTTCATGCACACTATTGGTT+TGG | + | chr8.4:31446353-31446372 | MS.gene23843:intron | 35.0% |
| !! | AATAATTCAGGTTGGTACTG+TGG | + | chr8.4:31447011-31447030 | MS.gene23843:intron | 35.0% |
| !! | ATAATTCAGGTTGGTACTGT+GGG | + | chr8.4:31447012-31447031 | MS.gene23843:intron | 35.0% |
| ACAGAAATTAGTGGTCCCTT+TGG | + | chr8.4:31446734-31446753 | MS.gene23843:intron | 40.0% | |
| ATGGATGTCATTGGAATCTC+AGG | + | chr8.4:31446237-31446256 | MS.gene23843:CDS | 40.0% | |
| ATTCCAATGACATCCATGTC+AGG | - | chr8.4:31446234-31446253 | None:intergenic | 40.0% | |
| CAGCTGTAAACTGGATTGAA+GGG | + | chr8.4:31446412-31446431 | MS.gene23843:CDS | 40.0% | |
| TGAGGCTGTTATTAAGGAAG+AGG | + | chr8.4:31446455-31446474 | MS.gene23843:CDS | 40.0% | |
| TTCCAATGACATCCATGTCA+GGG | - | chr8.4:31446233-31446252 | None:intergenic | 40.0% | |
| TTTCTGTTCCGACAAGAAAG+CGG | + | chr8.4:31446389-31446408 | MS.gene23843:CDS | 40.0% | |
| !! | ACTATTGGTTTGGTTATGGC+AGG | + | chr8.4:31446363-31446382 | MS.gene23843:intron | 40.0% |
| !! | AGGAACGGTTCTAGGATTAA+TGG | - | chr8.4:31446300-31446319 | None:intergenic | 40.0% |
| !! | GAAAGTGTTGAAGACTAGTG+TGG | + | chr8.4:31446485-31446504 | MS.gene23843:CDS | 40.0% |
| !! | GCACACTATTGGTTTGGTTA+TGG | + | chr8.4:31446359-31446378 | MS.gene23843:intron | 40.0% |
| AAGGTCCTTGCCATCATTCA+CGG | - | chr8.4:31446682-31446701 | None:intergenic | 45.0% | |
| AATAGCCTAGCATTTGCACC+TGG | - | chr8.4:31447111-31447130 | None:intergenic | 45.0% | |
| AATCTCCAGGTGCAAATGCT+AGG | + | chr8.4:31447103-31447122 | MS.gene23843:CDS | 45.0% | |
| AGAAAACCATGCTCGGTAGT+TGG | - | chr8.4:31446872-31446891 | None:intergenic | 45.0% | |
| AGCATTCAGCCTACAATTGC+TGG | + | chr8.4:31446102-31446121 | MS.gene23843:CDS | 45.0% | |
| AGGTGCAAATGCTAGGCTAT+TGG | + | chr8.4:31447110-31447129 | MS.gene23843:CDS | 45.0% | |
| ATCATTCACGGGTTCCATCA+TGG | - | chr8.4:31446670-31446689 | None:intergenic | 45.0% | |
| ATTCGATTCCGTTGCAGTAC+TGG | + | chr8.4:31446138-31446157 | MS.gene23843:CDS | 45.0% | |
| CCATAACAAGGAACGGTTCT+AGG | - | chr8.4:31446308-31446327 | None:intergenic | 45.0% | |
| CCTAGAACCGTTCCTTGTTA+TGG | + | chr8.4:31446305-31446324 | MS.gene23843:intron | 45.0% | |
| GAACTCTCAACATTCTGAGC+AGG | - | chr8.4:31446636-31446655 | None:intergenic | 45.0% | |
| GCAGCTGTAAACTGGATTGA+AGG | + | chr8.4:31446411-31446430 | MS.gene23843:CDS | 45.0% | |
| GCATGGTGACAGAAATGTGA+AGG | - | chr8.4:31446701-31446720 | None:intergenic | 45.0% | |
| GGCTGTTATTAAGGAAGAGG+TGG | + | chr8.4:31446458-31446477 | MS.gene23843:CDS | 45.0% | |
| GGTGTGTGAGGCTGTTATTA+AGG | + | chr8.4:31446449-31446468 | MS.gene23843:CDS | 45.0% | |
| TTCCCTGACATGGATGTCAT+TGG | + | chr8.4:31446228-31446247 | MS.gene23843:CDS | 45.0% | |
| ! | AGTGTTGAAGACTAGTGTGG+AGG | + | chr8.4:31446488-31446507 | MS.gene23843:CDS | 45.0% |
| ! | ATGATGGAACCCGTGAATGA+TGG | + | chr8.4:31446669-31446688 | MS.gene23843:CDS | 45.0% |
| ! | GGGATGAACATGGTGTCAAA+AGG | + | chr8.4:31446171-31446190 | MS.gene23843:CDS | 45.0% |
| !! | AAGTACTGAACCGGCAACAA+TGG | - | chr8.4:31447139-31447158 | None:intergenic | 45.0% |
| AGAAAGCGGCAGCTGTAAAC+TGG | + | chr8.4:31446403-31446422 | MS.gene23843:CDS | 50.0% | |
| AGGTCCTTGCCATCATTCAC+GGG | - | chr8.4:31446681-31446700 | None:intergenic | 50.0% | |
| CTACAACCAACTACCGAGCA+TGG | + | chr8.4:31446863-31446882 | MS.gene23843:intron | 50.0% | |
| CTATTGGCCACCATTGTTGC+CGG | + | chr8.4:31447126-31447145 | MS.gene23843:CDS | 50.0% | |
| CTCATGTCTGCAATTGCAGC+TGG | + | chr8.4:31447174-31447193 | MS.gene23843:CDS | 50.0% | |
| CTGTACCTCAATGGAAGGCA+TGG | - | chr8.4:31446718-31446737 | None:intergenic | 50.0% | |
| GTAAACTGGATTGAAGGGCG+TGG | + | chr8.4:31446417-31446436 | MS.gene23843:CDS | 50.0% | |
| TACTGAACCGGCAACAATGG+TGG | - | chr8.4:31447136-31447155 | None:intergenic | 50.0% | |
| TCAGAGTGACTTCCCTGACA+TGG | + | chr8.4:31446218-31446237 | MS.gene23843:CDS | 50.0% | |
| TCTGCTGTCTACATAGCCAC+TGG | + | chr8.4:31446603-31446622 | MS.gene23843:CDS | 50.0% | |
| TGACACCATGTTCATCCCCA+TGG | - | chr8.4:31446169-31446188 | None:intergenic | 50.0% | |
| TGATGCCATGGGGATGAACA+TGG | + | chr8.4:31446161-31446180 | MS.gene23843:CDS | 50.0% | |
| TGGCATCACCAGTACTGCAA+CGG | - | chr8.4:31446149-31446168 | None:intergenic | 50.0% | |
| TGGTAAGTCTGTGGTGTGTG+AGG | + | chr8.4:31446437-31446456 | MS.gene23843:CDS | 50.0% | |
| TGTCACCATGCCTTCCATTG+AGG | + | chr8.4:31446710-31446729 | MS.gene23843:CDS | 50.0% | |
| TGTCTACATAGCCACTGGTC+AGG | + | chr8.4:31446608-31446627 | MS.gene23843:CDS | 50.0% | |
| !! | ATTCAGGTTGGTACTGTGGG+AGG | + | chr8.4:31447015-31447034 | MS.gene23843:intron | 50.0% |
| !! | TACAGCTGCCGCTTTCTTGT+CGG | - | chr8.4:31446400-31446419 | None:intergenic | 50.0% |
| !! | TGCAGTACTGGTGATGCCAT+GGG | + | chr8.4:31446150-31446169 | MS.gene23843:CDS | 50.0% |
| !! | TGTTGCCGGTTCAGTACTTG+CGG | + | chr8.4:31447140-31447159 | MS.gene23843:CDS | 50.0% |
| !! | TTCAGGTTGGTACTGTGGGA+GGG | + | chr8.4:31447016-31447035 | MS.gene23843:intron | 50.0% |
| !! | TTGCAGTACTGGTGATGCCA+TGG | + | chr8.4:31446149-31446168 | MS.gene23843:CDS | 50.0% |
| CAGCAAGGGCTGATCCAGTT+AGG | - | chr8.4:31446542-31446561 | None:intergenic | 55.0% | |
| CTAACTGGATCAGCCCTTGC+TGG | + | chr8.4:31446540-31446559 | MS.gene23843:CDS | 55.0% | |
| GGAACCCGTGAATGATGGCA+AGG | + | chr8.4:31446674-31446693 | MS.gene23843:CDS | 55.0% | |
| TGCACCTGGAGATTCTGTGC+TGG | - | chr8.4:31447097-31447116 | None:intergenic | 55.0% | |
| ! | GAAGACTAGTGTGGAGGCAC+TGG | + | chr8.4:31446494-31446513 | MS.gene23843:CDS | 55.0% |
| ! | TGAAGGGCGTGGTAAGTCTG+TGG | + | chr8.4:31446428-31446447 | MS.gene23843:CDS | 55.0% |
| !! | GCAGTACTGGTGATGCCATG+GGG | + | chr8.4:31446151-31446170 | MS.gene23843:CDS | 55.0% |
| !! | GTTGCCGGTTCAGTACTTGC+GGG | + | chr8.4:31447141-31447160 | MS.gene23843:CDS | 55.0% |
| !! | TCAGGTTGGTACTGTGGGAG+GGG | + | chr8.4:31447017-31447036 | MS.gene23843:intron | 55.0% |
| CCCTTGCTGGTGCTCTTGGT+GGG | + | chr8.4:31446553-31446572 | MS.gene23843:CDS | 60.0% | |
| CTGAGCAGGATCCTGACCAG+TGG | - | chr8.4:31446622-31446641 | None:intergenic | 60.0% | |
| TCAGCCCTTGCTGGTGCTCT+TGG | + | chr8.4:31446549-31446568 | MS.gene23843:CDS | 60.0% | |
| !! | ACCCACCAAGAGCACCAGCA+AGG | - | chr8.4:31446557-31446576 | None:intergenic | 60.0% |
| !! | CAGGTTGGTACTGTGGGAGG+GGG | + | chr8.4:31447018-31447037 | MS.gene23843:intron | 60.0% |
| !! | CCCACCAAGAGCACCAGCAA+GGG | - | chr8.4:31446556-31446575 | None:intergenic | 60.0% |
| !! | CTCGCCCGCAAGTACTGAAC+CGG | - | chr8.4:31447148-31447167 | None:intergenic | 60.0% |
| GCCCTTGCTGGTGCTCTTGG+TGG | + | chr8.4:31446552-31446571 | MS.gene23843:CDS | 65.0% | |
| GGCGCCAGCACAGAATCTCC+AGG | + | chr8.4:31447090-31447109 | MS.gene23843:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 31446063 | 31447263 | 31446063 | ID=MS.gene23843 |
| chr8.4 | mRNA | 31446063 | 31447263 | 31446063 | ID=MS.gene23843.t1;Parent=MS.gene23843 |
| chr8.4 | exon | 31446063 | 31446258 | 31446063 | ID=MS.gene23843.t1.exon1;Parent=MS.gene23843.t1 |
| chr8.4 | CDS | 31446063 | 31446258 | 31446063 | ID=cds.MS.gene23843.t1;Parent=MS.gene23843.t1 |
| chr8.4 | exon | 31446385 | 31446731 | 31446385 | ID=MS.gene23843.t1.exon2;Parent=MS.gene23843.t1 |
| chr8.4 | CDS | 31446385 | 31446731 | 31446385 | ID=cds.MS.gene23843.t1;Parent=MS.gene23843.t1 |
| chr8.4 | exon | 31447021 | 31447263 | 31447021 | ID=MS.gene23843.t1.exon3;Parent=MS.gene23843.t1 |
| chr8.4 | CDS | 31447021 | 31447263 | 31447021 | ID=cds.MS.gene23843.t1;Parent=MS.gene23843.t1 |
| Gene Sequence |
| Protein sequence |
