Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24525.t1 | XP_013465933.1 | 94.9 | 198 | 9 | 1 | 1 | 198 | 50 | 246 | 3.40E-93 | 351.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24525.t1 | P46604 | 55.9 | 202 | 73 | 5 | 11 | 203 | 51 | 245 | 2.1e-43 | 177.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24525.t1 | A0A072VD79 | 94.9 | 198 | 9 | 1 | 1 | 198 | 50 | 246 | 2.4e-93 | 351.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene24525.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051649 | MS.gene24525 | 0.813484 | 2.50E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24525.t1 | MTR_1g017090 | 94.170 | 223 | 11 | 2 | 1 | 222 | 50 | 271 | 7.23e-150 | 418 |
| MS.gene24525.t1 | MTR_4g097600 | 72.308 | 130 | 32 | 2 | 69 | 196 | 112 | 239 | 4.61e-61 | 192 |
| MS.gene24525.t1 | MTR_5g014890 | 63.871 | 155 | 44 | 4 | 75 | 223 | 115 | 263 | 3.71e-60 | 190 |
| MS.gene24525.t1 | MTR_1g054285 | 70.079 | 127 | 36 | 1 | 70 | 196 | 142 | 266 | 1.20e-58 | 187 |
| MS.gene24525.t1 | MTR_7g093430 | 69.919 | 123 | 35 | 1 | 75 | 197 | 153 | 273 | 3.44e-57 | 183 |
| MS.gene24525.t1 | MTR_5g013010 | 51.892 | 185 | 75 | 5 | 40 | 222 | 96 | 268 | 2.35e-54 | 176 |
| MS.gene24525.t1 | MTR_4g100550 | 52.778 | 180 | 68 | 5 | 40 | 218 | 85 | 248 | 1.49e-53 | 173 |
| MS.gene24525.t1 | MTR_3g103590 | 51.064 | 235 | 95 | 8 | 2 | 222 | 61 | 289 | 1.52e-53 | 174 |
| MS.gene24525.t1 | MTR_2g061030 | 71.552 | 116 | 31 | 1 | 81 | 196 | 199 | 312 | 3.07e-53 | 174 |
| MS.gene24525.t1 | MTR_8g006705 | 69.565 | 115 | 32 | 2 | 81 | 194 | 145 | 257 | 1.42e-50 | 166 |
| MS.gene24525.t1 | MTR_4g084750 | 47.674 | 172 | 67 | 5 | 36 | 194 | 20 | 181 | 1.81e-42 | 142 |
| MS.gene24525.t1 | MTR_2g038625 | 49.032 | 155 | 75 | 3 | 46 | 200 | 49 | 199 | 1.74e-37 | 130 |
| MS.gene24525.t1 | MTR_2g038580 | 49.032 | 155 | 75 | 3 | 46 | 200 | 49 | 199 | 1.74e-37 | 130 |
| MS.gene24525.t1 | MTR_4g126900 | 59.292 | 113 | 44 | 2 | 84 | 194 | 90 | 202 | 5.39e-35 | 124 |
| MS.gene24525.t1 | MTR_5g013010 | 57.609 | 92 | 35 | 2 | 43 | 133 | 99 | 187 | 2.72e-23 | 93.6 |
| MS.gene24525.t1 | MTR_6g007647 | 51.648 | 91 | 44 | 0 | 79 | 169 | 30 | 120 | 1.27e-21 | 90.1 |
| MS.gene24525.t1 | MTR_6g007647 | 51.648 | 91 | 44 | 0 | 79 | 169 | 64 | 154 | 1.70e-21 | 90.5 |
| MS.gene24525.t1 | MTR_7g010020 | 42.991 | 107 | 54 | 1 | 81 | 180 | 79 | 185 | 1.08e-18 | 82.4 |
| MS.gene24525.t1 | MTR_7g103340 | 41.346 | 104 | 61 | 0 | 66 | 169 | 47 | 150 | 1.16e-18 | 81.6 |
| MS.gene24525.t1 | MTR_1g061660 | 45.263 | 95 | 52 | 0 | 76 | 170 | 53 | 147 | 2.25e-18 | 80.9 |
| MS.gene24525.t1 | MTR_8g089895 | 44.628 | 121 | 56 | 3 | 56 | 169 | 32 | 148 | 5.14e-18 | 81.3 |
| MS.gene24525.t1 | MTR_3g080100 | 46.078 | 102 | 46 | 2 | 77 | 169 | 13 | 114 | 6.15e-18 | 79.3 |
| MS.gene24525.t1 | MTR_3g080100 | 46.078 | 102 | 46 | 2 | 77 | 169 | 52 | 153 | 9.38e-18 | 79.7 |
| MS.gene24525.t1 | MTR_5g039000 | 43.434 | 99 | 54 | 1 | 73 | 169 | 66 | 164 | 1.01e-17 | 80.1 |
| MS.gene24525.t1 | MTR_8g468210 | 40.678 | 118 | 59 | 2 | 54 | 169 | 56 | 164 | 3.14e-17 | 78.6 |
| MS.gene24525.t1 | MTR_3g086790 | 47.368 | 95 | 43 | 1 | 82 | 169 | 60 | 154 | 3.72e-17 | 79.0 |
| MS.gene24525.t1 | MTR_8g469430 | 46.875 | 96 | 44 | 1 | 80 | 168 | 87 | 182 | 8.25e-17 | 77.8 |
| MS.gene24525.t1 | MTR_4g107650 | 48.864 | 88 | 45 | 0 | 82 | 169 | 95 | 182 | 1.70e-16 | 77.4 |
| MS.gene24525.t1 | MTR_6g011610 | 47.872 | 94 | 42 | 1 | 82 | 168 | 96 | 189 | 2.43e-16 | 76.3 |
| MS.gene24525.t1 | MTR_6g011610 | 47.872 | 94 | 42 | 1 | 82 | 168 | 77 | 170 | 3.91e-16 | 75.5 |
| MS.gene24525.t1 | MTR_5g038280 | 45.263 | 95 | 45 | 1 | 82 | 169 | 87 | 181 | 1.64e-15 | 74.3 |
| MS.gene24525.t1 | MTR_5g019650 | 45.882 | 85 | 46 | 0 | 82 | 166 | 53 | 137 | 1.56e-11 | 62.0 |
| MS.gene24525.t1 | MTR_3g092150 | 41.935 | 93 | 47 | 1 | 85 | 170 | 41 | 133 | 1.58e-11 | 62.4 |
| MS.gene24525.t1 | MTR_5g029320 | 34.375 | 128 | 72 | 2 | 41 | 167 | 61 | 177 | 2.16e-11 | 63.2 |
| MS.gene24525.t1 | MTR_5g019680 | 49.296 | 71 | 36 | 0 | 82 | 152 | 53 | 123 | 5.40e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24525.t1 | AT5G06710 | 56.425 | 179 | 63 | 5 | 40 | 209 | 140 | 312 | 9.45e-60 | 191 |
| MS.gene24525.t1 | AT4G37790 | 73.984 | 123 | 29 | 2 | 75 | 196 | 118 | 238 | 2.17e-59 | 188 |
| MS.gene24525.t1 | AT2G22800 | 72.358 | 123 | 31 | 2 | 75 | 196 | 105 | 225 | 1.92e-56 | 181 |
| MS.gene24525.t1 | AT4G16780 | 59.589 | 146 | 48 | 4 | 75 | 218 | 121 | 257 | 1.33e-52 | 171 |
| MS.gene24525.t1 | AT3G60390 | 66.667 | 123 | 40 | 1 | 72 | 194 | 152 | 273 | 6.57e-52 | 170 |
| MS.gene24525.t1 | AT5G47370 | 46.544 | 217 | 91 | 7 | 16 | 221 | 54 | 256 | 3.14e-50 | 165 |
| MS.gene24525.t1 | AT2G44910 | 68.376 | 117 | 34 | 2 | 81 | 196 | 162 | 276 | 8.50e-50 | 165 |
| MS.gene24525.t1 | AT4G17460 | 64.407 | 118 | 41 | 1 | 81 | 198 | 134 | 250 | 8.49e-47 | 156 |
| MS.gene24525.t1 | AT2G01430 | 46.584 | 161 | 73 | 5 | 45 | 196 | 93 | 249 | 1.33e-39 | 137 |
| MS.gene24525.t1 | AT1G70920 | 46.667 | 150 | 67 | 2 | 57 | 204 | 14 | 152 | 1.41e-35 | 124 |
| MS.gene24525.t1 | AT1G70920 | 46.667 | 150 | 67 | 2 | 57 | 204 | 44 | 182 | 1.42e-35 | 125 |
| MS.gene24525.t1 | AT5G06710 | 54.369 | 103 | 37 | 3 | 40 | 133 | 140 | 241 | 1.83e-24 | 98.2 |
| MS.gene24525.t1 | AT2G01430 | 46.465 | 99 | 44 | 3 | 44 | 133 | 92 | 190 | 1.16e-20 | 86.7 |
| MS.gene24525.t1 | AT3G01470 | 46.316 | 95 | 44 | 1 | 80 | 167 | 66 | 160 | 3.33e-18 | 81.3 |
| MS.gene24525.t1 | AT1G69780 | 44.444 | 99 | 53 | 1 | 73 | 169 | 74 | 172 | 4.78e-17 | 78.6 |
| MS.gene24525.t1 | AT1G26960 | 46.316 | 95 | 49 | 1 | 77 | 169 | 64 | 158 | 7.69e-17 | 77.4 |
| MS.gene24525.t1 | AT5G15150 | 38.462 | 143 | 75 | 3 | 73 | 204 | 102 | 242 | 2.17e-16 | 77.0 |
| MS.gene24525.t1 | AT2G22430 | 37.956 | 137 | 72 | 3 | 46 | 172 | 23 | 156 | 2.30e-16 | 76.6 |
| MS.gene24525.t1 | AT4G40060 | 42.857 | 105 | 56 | 1 | 72 | 172 | 49 | 153 | 6.32e-16 | 75.5 |
| MS.gene24525.t1 | AT5G65310 | 43.434 | 99 | 49 | 1 | 82 | 173 | 72 | 170 | 1.43e-15 | 74.7 |
| MS.gene24525.t1 | AT5G65310 | 43.434 | 99 | 49 | 1 | 82 | 173 | 54 | 152 | 1.52e-15 | 74.3 |
| MS.gene24525.t1 | AT1G27045 | 50.000 | 88 | 44 | 0 | 82 | 169 | 68 | 155 | 1.79e-15 | 73.2 |
| MS.gene24525.t1 | AT1G27045 | 50.000 | 88 | 44 | 0 | 82 | 169 | 68 | 155 | 2.69e-15 | 73.2 |
| MS.gene24525.t1 | AT1G27045 | 50.000 | 88 | 44 | 0 | 82 | 169 | 25 | 112 | 3.08e-15 | 71.6 |
| MS.gene24525.t1 | AT1G27045 | 50.000 | 88 | 44 | 0 | 82 | 169 | 25 | 112 | 3.08e-15 | 71.6 |
| MS.gene24525.t1 | AT1G27045 | 57.576 | 66 | 28 | 0 | 82 | 147 | 17 | 82 | 3.30e-15 | 71.2 |
| MS.gene24525.t1 | AT3G01220 | 41.667 | 108 | 52 | 2 | 73 | 169 | 74 | 181 | 1.26e-14 | 71.6 |
| MS.gene24525.t1 | AT2G36610 | 41.176 | 102 | 52 | 1 | 77 | 170 | 66 | 167 | 1.69e-14 | 69.7 |
| MS.gene24525.t1 | AT5G03790 | 40.449 | 89 | 53 | 0 | 82 | 170 | 77 | 165 | 7.82e-14 | 68.6 |
| MS.gene24525.t1 | AT5G03790 | 36.207 | 116 | 68 | 2 | 82 | 191 | 77 | 192 | 7.08e-13 | 65.5 |
| MS.gene24525.t1 | AT2G46680 | 42.353 | 85 | 49 | 0 | 85 | 169 | 35 | 119 | 7.33e-13 | 66.2 |
| MS.gene24525.t1 | AT2G46680 | 42.353 | 85 | 49 | 0 | 85 | 169 | 35 | 119 | 8.60e-13 | 66.2 |
| MS.gene24525.t1 | AT2G18550 | 37.864 | 103 | 63 | 1 | 66 | 168 | 46 | 147 | 1.26e-11 | 62.4 |
| MS.gene24525.t1 | AT4G36740 | 39.080 | 87 | 53 | 0 | 82 | 168 | 56 | 142 | 5.07e-11 | 60.5 |
| MS.gene24525.t1 | AT4G36740 | 39.080 | 87 | 53 | 0 | 82 | 168 | 55 | 141 | 5.42e-11 | 60.5 |
Find 0 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAATTAAATTCTA+AGG | - | 8582:17308-17327 | MS.gene24525:intergenic | 10.0% |
| !! | AAACAAAGAAGTAAAATATA+TGG | - | 8582:17719-17738 | MS.gene24525:intergenic | 15.0% |
| !! | AAGTTTATAAAAATTGTTTC+AGG | - | 8582:17213-17232 | MS.gene24525:intergenic | 15.0% |
| !!! | ACAATTTTTATAAACTTGTA+CGG | + | 8582:17216-17235 | MS.gene24525:intron | 15.0% |
| !!! | ATTTTATTAGAATTAGATCT+TGG | + | 8582:17003-17022 | MS.gene24525:intron | 15.0% |
| !! | AAATTTGTAATACATTGGAT+TGG | - | 8582:17351-17370 | MS.gene24525:intergenic | 20.0% |
| !! | AGTTTCAAAATTTATTCTCT+TGG | + | 8582:17084-17103 | MS.gene24525:intron | 20.0% |
| !! | ATATAATTTCACAAAATCTG+AGG | - | 8582:18015-18034 | MS.gene24525:intergenic | 20.0% |
| !! | ATGAGAATATTGATGAATTA+AGG | - | 8582:16732-16751 | MS.gene24525:intergenic | 20.0% |
| !! | CTACAAAATTTGTAATACAT+TGG | - | 8582:17356-17375 | MS.gene24525:intergenic | 20.0% |
| !! | TTTCAGGAAATTATTTATTC+TGG | - | 8582:17197-17216 | MS.gene24525:intergenic | 20.0% |
| !!! | ACTTCTTTGTTTTTTTTTAC+TGG | + | 8582:17727-17746 | MS.gene24525:intron | 20.0% |
| !!! | CATTTTTTTAGAAATGTTTC+TGG | + | 8582:17265-17284 | MS.gene24525:intron | 20.0% |
| !!! | GAAACATTTCTAAAAAAATG+AGG | - | 8582:17265-17284 | MS.gene24525:intergenic | 20.0% |
| !!! | TCATTTCCATAAAAACTTTT+TGG | + | 8582:18325-18344 | MS.gene24525:CDS | 20.0% |
| ! | ACAAAAAATGTTAACAGCTA+GGG | + | 8582:17921-17940 | MS.gene24525:intron | 25.0% |
| ! | AGACGTTTAAAAAGTTTAGA+AGG | - | 8582:17962-17981 | MS.gene24525:intergenic | 25.0% |
| ! | ATATATATTGTTAGAGCGAA+AGG | + | 8582:17830-17849 | MS.gene24525:intron | 25.0% |
| ! | ATATTGATGAATTAAGGTAC+CGG | - | 8582:16726-16745 | MS.gene24525:intergenic | 25.0% |
| ! | CATCAATATTCTCATATCTT+TGG | + | 8582:16737-16756 | MS.gene24525:intron | 25.0% |
| !! | AAAACAACAATCAGAAGTTT+TGG | + | 8582:16668-16687 | MS.gene24525:CDS | 25.0% |
| !! | AATATCAAAACAAAAGTACG+TGG | - | 8582:16792-16811 | MS.gene24525:intergenic | 25.0% |
| !! | ATAGGAAATGTTGATAAAGA+TGG | + | 8582:16618-16637 | MS.gene24525:CDS | 25.0% |
| AAAAGTTTAGAAGGAGGTTT+AGG | - | 8582:17953-17972 | MS.gene24524:intergenic | 30.0% | |
| AAAGTTTAGAAGGAGGTTTA+GGG | - | 8582:17952-17971 | MS.gene24524:intergenic | 30.0% | |
| ACAACATTCAACATCAAAGA+CGG | + | 8582:16461-16480 | MS.gene24525:CDS | 30.0% | |
| ACATTTCCTATCCTTGTAAT+TGG | - | 8582:16609-16628 | MS.gene24525:intergenic | 30.0% | |
| ATCATCATGACAATTGCTAA+TGG | - | 8582:17597-17616 | MS.gene24525:intergenic | 30.0% | |
| CACAAAAAATGTTAACAGCT+AGG | + | 8582:17920-17939 | MS.gene24525:intron | 30.0% | |
| CGTTTAAAAAGTTTAGAAGG+AGG | - | 8582:17959-17978 | MS.gene24525:intergenic | 30.0% | |
| GCTGGAATCTTCATATAAAA+GGG | - | 8582:18206-18225 | MS.gene24525:intergenic | 30.0% | |
| GGTAAAATCTTGATATTCCT+AGG | + | 8582:17146-17165 | MS.gene24525:intron | 30.0% | |
| TATGAAGCAAACTCAATCTA+AGG | - | 8582:17065-17084 | MS.gene24525:intergenic | 30.0% | |
| TGCTGGAATCTTCATATAAA+AGG | - | 8582:18207-18226 | MS.gene24525:intergenic | 30.0% | |
| TTAGAATTAGATCTTGGTCT+TGG | + | 8582:17009-17028 | MS.gene24525:intron | 30.0% | |
| TTCACAAAATCTGAGGAATA+AGG | - | 8582:18008-18027 | MS.gene24525:intergenic | 30.0% | |
| ! | AAAACAAAAGTACGTGGTAT+AGG | - | 8582:16786-16805 | MS.gene24525:intergenic | 30.0% |
| ! | ATTTGAGGTAGAGATAGAAA+AGG | + | 8582:16581-16600 | MS.gene24525:CDS | 30.0% |
| ! | ATTTTACCAAACACTTTGGT+GGG | - | 8582:17134-17153 | MS.gene24525:intergenic | 30.0% |
| ! | CAAGATTTTACCAAACACTT+TGG | - | 8582:17138-17157 | MS.gene24525:intergenic | 30.0% |
| ! | TCTCTTGGATTACATTTTCT+AGG | + | 8582:17099-17118 | MS.gene24525:intron | 30.0% |
| AAGGTAAAGTATGCGATCAA+AGG | - | 8582:17989-18008 | MS.gene24525:intergenic | 35.0% | |
| AGGTAAAGTATGCGATCAAA+GGG | - | 8582:17988-18007 | MS.gene24525:intergenic | 35.0% | |
| CAGAACAAAGCTGAAACAAA+CGG | + | 8582:18070-18089 | MS.gene24525:intron | 35.0% | |
| CGATACTATCTTAAAACGCA+CGG | - | 8582:17528-17547 | MS.gene24525:intergenic | 35.0% | |
| CTTGATATTCCTAGGAAAGT+TGG | + | 8582:17154-17173 | MS.gene24525:intron | 35.0% | |
| CTTGCAGAAGTAAATTGAGT+AGG | - | 8582:16507-16526 | MS.gene24525:intergenic | 35.0% | |
| ! | AGAGCATTCTACTCTTAATC+CGG | + | 8582:16704-16723 | MS.gene24525:CDS | 35.0% |
| ! | ATATTCCTAGGAAAGTTGGT+AGG | + | 8582:17158-17177 | MS.gene24525:intron | 35.0% |
| ! | ATTATTCCCACCAAAGTGTT+TGG | + | 8582:17125-17144 | MS.gene24525:intron | 35.0% |
| ! | GATTTTACCAAACACTTTGG+TGG | - | 8582:17135-17154 | MS.gene24525:intergenic | 35.0% |
| ! | TAGAGGTGTGGTTTCAAAAT+CGG | + | 8582:17481-17500 | MS.gene24525:CDS | 35.0% |
| ! | TCTAAGGTGTGTTTGTTTCA+AGG | - | 8582:17292-17311 | MS.gene24525:intergenic | 35.0% |
| !! | ACAACAATCAGAAGTTTTGG+AGG | + | 8582:16671-16690 | MS.gene24525:CDS | 35.0% |
| !! | TAGAAAAGGTGCCAATTACA+AGG | + | 8582:16595-16614 | MS.gene24525:CDS | 35.0% |
| AAGCAATGTTGTTGAGGGTA+AGG | - | 8582:18288-18307 | MS.gene24525:intergenic | 40.0% | |
| AGCAAATAAGCTGAATCTGC+AGG | + | 8582:17449-17468 | MS.gene24525:CDS | 40.0% | |
| AGGAGAAAACTTAGATGGCA+CGG | + | 8582:17850-17869 | MS.gene24525:intron | 40.0% | |
| ATTTGTGGTGGCAACAACAA+TGG | + | 8582:18260-18279 | MS.gene24525:CDS | 40.0% | |
| CCAGTAAGCAATGTTGTTGA+GGG | - | 8582:18293-18312 | MS.gene24525:intergenic | 40.0% | |
| GCGAAAGGAGAAAACTTAGA+TGG | + | 8582:17845-17864 | MS.gene24525:intron | 40.0% | |
| GCTTACATTAGGACCATCAA+AGG | + | 8582:16410-16429 | MS.gene24525:CDS | 40.0% | |
| GGAGAACAAGAAGTTGCAAA+AGG | + | 8582:18139-18158 | MS.gene24525:CDS | 40.0% | |
| TATTCTCTACGTGCGCAATA+TGG | - | 8582:17887-17906 | MS.gene24525:intergenic | 40.0% | |
| TCTTCACTCTCTTCCTTTGA+TGG | - | 8582:16426-16445 | MS.gene24525:intergenic | 40.0% | |
| TGAGCCTAAGTTTCTTCCTT+GGG | - | 8582:16647-16666 | MS.gene24525:intergenic | 40.0% | |
| TTGATAAAGATGGTAGCCCA+AGG | + | 8582:16628-16647 | MS.gene24525:CDS | 40.0% | |
| TTTCAAATTCCACCAGCATC+AGG | + | 8582:16541-16560 | MS.gene24525:CDS | 40.0% | |
| ! | AAGGTGCCAATTACAAGGAT+AGG | + | 8582:16600-16619 | MS.gene24525:CDS | 40.0% |
| ! | CACGCACAGTATTTTTCTCA+TGG | + | 8582:16905-16924 | MS.gene24525:intron | 40.0% |
| ! | TGGTCTTGGTTGATTGTGTT+TGG | + | 8582:17023-17042 | MS.gene24525:intron | 40.0% |
| AAATTCCACCAGCATCAGGA+AGG | + | 8582:16545-16564 | MS.gene24525:CDS | 45.0% | |
| ACACACCTACCAACTTTCCT+AGG | - | 8582:17166-17185 | MS.gene24525:intergenic | 45.0% | |
| CACAAATTGTCTCGCACGAA+GGG | - | 8582:18247-18266 | MS.gene24525:intergenic | 45.0% | |
| CCCTCAACAACATTGCTTAC+TGG | + | 8582:18290-18309 | MS.gene24525:CDS | 45.0% | |
| GCCAGTAAGCAATGTTGTTG+AGG | - | 8582:18294-18313 | MS.gene24525:intergenic | 45.0% | |
| GTAGCCCAAGGAAGAAACTT+AGG | + | 8582:16640-16659 | MS.gene24525:CDS | 45.0% | |
| GTGAGCCTAAGTTTCTTCCT+TGG | - | 8582:16648-16667 | MS.gene24525:intergenic | 45.0% | |
| GTGTTGCGAATCTCTAACAG+AGG | + | 8582:18118-18137 | MS.gene24525:CDS | 45.0% | |
| AGGCTAGACAAGTAGAGGTG+TGG | + | 8582:17469-17488 | MS.gene24525:CDS | 50.0% | |
| CCACAAATTGTCTCGCACGA+AGG | - | 8582:18248-18267 | MS.gene24525:intergenic | 50.0% | |
| CCTTCGTGCGAGACAATTTG+TGG | + | 8582:18245-18264 | MS.gene24525:CDS | 50.0% | |
| GCACGGAGCAGTAAATTACC+TGG | - | 8582:17511-17530 | MS.gene24525:intergenic | 50.0% | |
| GGAGAGTGGTGAGGAATTTG+AGG | + | 8582:16566-16585 | MS.gene24525:CDS | 50.0% | |
| GGTTTCAAAATCGGAGAGCC+AGG | + | 8582:17490-17509 | MS.gene24525:CDS | 50.0% | |
| TCGTGCGAGACAATTTGTGG+TGG | + | 8582:18248-18267 | MS.gene24525:CDS | 50.0% | |
| TCTGCAGGCTAGACAAGTAG+AGG | + | 8582:17464-17483 | MS.gene24525:CDS | 50.0% | |
| ! | CAGATGGTAAGTGTTGCTGC+TGG | - | 8582:18224-18243 | MS.gene24525:intergenic | 50.0% |
| ACCACTCTCCTTCCTGATGC+TGG | - | 8582:16556-16575 | MS.gene24525:intergenic | 55.0% | |
| ACCAGCATCAGGAAGGAGAG+TGG | + | 8582:16552-16571 | MS.gene24525:CDS | 55.0% | |
| ACTCTCCTTCCTGATGCTGG+TGG | - | 8582:16553-16572 | MS.gene24525:intergenic | 55.0% | |
| CATCAGGAAGGAGAGTGGTG+AGG | + | 8582:16557-16576 | MS.gene24525:CDS | 55.0% | |
| TGTCTCGCACGAAGGGCAGA+TGG | - | 8582:18240-18259 | MS.gene24525:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8582 | gene | 16408 | 18352 | 16408 | ID=MS.gene24525 |
| 8582 | mRNA | 16408 | 18352 | 16408 | ID=MS.gene24525.t1;Parent=MS.gene24525 |
| 8582 | exon | 16408 | 16725 | 16408 | ID=MS.gene24525.t1.exon1;Parent=MS.gene24525.t1 |
| 8582 | CDS | 16408 | 16725 | 16408 | ID=cds.MS.gene24525.t1;Parent=MS.gene24525.t1 |
| 8582 | exon | 17432 | 17511 | 17432 | ID=MS.gene24525.t1.exon2;Parent=MS.gene24525.t1 |
| 8582 | CDS | 17432 | 17511 | 17432 | ID=cds.MS.gene24525.t1;Parent=MS.gene24525.t1 |
| 8582 | exon | 18073 | 18352 | 18073 | ID=MS.gene24525.t1.exon3;Parent=MS.gene24525.t1 |
| 8582 | CDS | 18073 | 18352 | 18073 | ID=cds.MS.gene24525.t1;Parent=MS.gene24525.t1 |
| Gene Sequence |
| Protein sequence |
