Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24559.t1 | XP_003589006.1 | 99.2 | 655 | 3 | 1 | 1 | 655 | 102 | 754 | 0.00E+00 | 1156 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24559.t1 | Q9LI74 | 33.4 | 859 | 329 | 14 | 28 | 649 | 130 | 982 | 1.3e-90 | 335.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24559.t1 | G7IB73 | 99.2 | 655 | 3 | 1 | 1 | 655 | 102 | 754 | 0.0e+00 | 1156.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051614 | MS.gene24559 | 0.902053 | 1.44E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24559.t1 | MTR_1g016290 | 99.084 | 655 | 4 | 1 | 1 | 655 | 102 | 754 | 0.0 | 1328 |
| MS.gene24559.t1 | MTR_5g053270 | 62.835 | 261 | 97 | 0 | 386 | 646 | 716 | 976 | 6.56e-112 | 360 |
| MS.gene24559.t1 | MTR_5g053270 | 37.288 | 236 | 85 | 6 | 27 | 199 | 126 | 361 | 1.06e-28 | 122 |
| MS.gene24559.t1 | MTR_4g087780 | 62.313 | 268 | 95 | 3 | 384 | 649 | 345 | 608 | 2.34e-110 | 346 |
| MS.gene24559.t1 | MTR_1g093850 | 62.214 | 262 | 98 | 1 | 386 | 647 | 711 | 971 | 9.96e-110 | 354 |
| MS.gene24559.t1 | MTR_1g093850 | 33.468 | 248 | 90 | 5 | 27 | 199 | 133 | 380 | 2.30e-25 | 112 |
| MS.gene24559.t1 | MTR_4g124070 | 50.545 | 275 | 136 | 0 | 372 | 646 | 280 | 554 | 2.68e-89 | 289 |
| MS.gene24559.t1 | MTR_4g124070 | 50.545 | 275 | 136 | 0 | 372 | 646 | 279 | 553 | 2.75e-89 | 289 |
| MS.gene24559.t1 | MTR_5g071840 | 49.057 | 265 | 130 | 4 | 386 | 649 | 160 | 420 | 5.83e-83 | 268 |
| MS.gene24559.t1 | MTR_5g071817 | 48.980 | 245 | 120 | 4 | 386 | 629 | 160 | 400 | 6.17e-75 | 246 |
| MS.gene24559.t1 | MTR_7g101060 | 72.308 | 65 | 12 | 2 | 54 | 113 | 61 | 124 | 8.03e-16 | 75.9 |
| MS.gene24559.t1 | MTR_0170s0030 | 41.053 | 95 | 51 | 1 | 105 | 199 | 220 | 309 | 6.62e-12 | 68.9 |
| MS.gene24559.t1 | MTR_2g100630 | 32.558 | 172 | 85 | 6 | 45 | 199 | 204 | 361 | 3.45e-11 | 66.6 |
| MS.gene24559.t1 | MTR_8g014900 | 38.144 | 97 | 57 | 1 | 103 | 199 | 278 | 371 | 4.16e-11 | 66.6 |
| MS.gene24559.t1 | MTR_2g100630 | 32.558 | 172 | 85 | 6 | 45 | 199 | 163 | 320 | 4.71e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24559.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 577 | 841 | 1.73e-109 | 350 |
| MS.gene24559.t1 | AT3G25690 | 49.573 | 117 | 55 | 1 | 83 | 199 | 111 | 223 | 1.91e-25 | 112 |
| MS.gene24559.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 3.19e-108 | 350 |
| MS.gene24559.t1 | AT3G25690 | 33.984 | 256 | 100 | 5 | 28 | 214 | 130 | 385 | 6.24e-26 | 114 |
| MS.gene24559.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 3.19e-108 | 350 |
| MS.gene24559.t1 | AT3G25690 | 33.984 | 256 | 100 | 5 | 28 | 214 | 130 | 385 | 6.24e-26 | 114 |
| MS.gene24559.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 3.19e-108 | 350 |
| MS.gene24559.t1 | AT3G25690 | 33.984 | 256 | 100 | 5 | 28 | 214 | 130 | 385 | 6.24e-26 | 114 |
| MS.gene24559.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 3.19e-108 | 350 |
| MS.gene24559.t1 | AT3G25690 | 33.984 | 256 | 100 | 5 | 28 | 214 | 130 | 385 | 6.24e-26 | 114 |
| MS.gene24559.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 720 | 984 | 3.71e-108 | 350 |
| MS.gene24559.t1 | AT3G25690 | 34.468 | 235 | 91 | 4 | 28 | 199 | 132 | 366 | 6.88e-26 | 114 |
| MS.gene24559.t1 | AT4G18570 | 60.806 | 273 | 98 | 4 | 383 | 649 | 350 | 619 | 6.85e-104 | 330 |
| MS.gene24559.t1 | AT1G48280 | 52.256 | 266 | 127 | 0 | 381 | 646 | 274 | 539 | 9.24e-91 | 293 |
| MS.gene24559.t1 | AT4G18570 | 59.709 | 206 | 76 | 3 | 383 | 582 | 350 | 554 | 1.84e-73 | 248 |
| MS.gene24559.t1 | AT1G07120 | 46.097 | 269 | 132 | 4 | 386 | 650 | 128 | 387 | 1.57e-72 | 239 |
| MS.gene24559.t1 | AT1G07120 | 45.771 | 201 | 100 | 3 | 386 | 582 | 128 | 323 | 9.67e-49 | 174 |
Find 127 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCCTCGGCTTTAAATT+TGG | 0.233447 | 1.2:+6223067 | None:intergenic |
| GGTGGTGGCGGAGGTGGAGG+TGG | 0.259596 | 1.2:+6222417 | None:intergenic |
| TACTTGTAGGCTTTCTTCTA+TGG | 0.262191 | 1.2:-6224442 | MS.gene24559:CDS |
| TGATATTGCTCTAAAGAAAA+TGG | 0.268432 | 1.2:-6221521 | MS.gene24559:CDS |
| ATGCTTGATAATGGAATTAT+TGG | 0.278942 | 1.2:-6221315 | MS.gene24559:CDS |
| AAAACTAGGATCAGTTAAAT+TGG | 0.291605 | 1.2:-6220942 | MS.gene24559:CDS |
| GGTGGCGGAGGTGGAGGTGG+AGG | 0.292796 | 1.2:+6222420 | None:intergenic |
| AAATGATCACTACTAGTTAT+TGG | 0.298597 | 1.2:+6222777 | None:intergenic |
| AGATCCTGCAATGGATTATA+TGG | 0.310246 | 1.2:-6220861 | MS.gene24559:CDS |
| TGAGCTGAGAAGGTTGAATA+AGG | 0.327504 | 1.2:-6224490 | MS.gene24559:CDS |
| GGAGGTGGTGGCGGAGGTGG+AGG | 0.334995 | 1.2:+6222414 | None:intergenic |
| AAGCTTGTTACAAGAGTCTA+AGG | 0.336420 | 1.2:-6224718 | MS.gene24559:CDS |
| CGAATTCACCCATCTCAAAT+AGG | 0.339553 | 1.2:+6222962 | None:intergenic |
| GAAGGTCTTGGAGGTGGATT+AGG | 0.341697 | 1.2:+6222501 | None:intergenic |
| GGCGGAGGTGGAGGTGGAGG+AGG | 0.342439 | 1.2:+6222423 | None:intergenic |
| AAATTGGATTGAATCGATTT+CGG | 0.346302 | 1.2:-6222715 | MS.gene24559:CDS |
| AATGTGTCAGCTTTCTTCTC+TGG | 0.352626 | 1.2:+6221628 | None:intergenic |
| TATTTGTTAATGCAGTTTGC+AGG | 0.371953 | 1.2:-6219526 | MS.gene24559:intron |
| AGCAATATCACAAGGTAGCC+TGG | 0.385664 | 1.2:+6221534 | None:intergenic |
| AGAAGAAGACATTCAATTAG+TGG | 0.386625 | 1.2:-6222681 | MS.gene24559:CDS |
| ACATTAAGAGAAGCAGCATT+TGG | 0.387362 | 1.2:-6221610 | MS.gene24559:CDS |
| GTAGAATGGATGCTTGATAA+TGG | 0.387727 | 1.2:-6221324 | MS.gene24559:CDS |
| AACTGATTTGTTCACGGAGT+TGG | 0.390136 | 1.2:-6224751 | MS.gene24559:CDS |
| GGGTGATTTATCATGTTCTC+AGG | 0.396815 | 1.2:-6224814 | MS.gene24559:CDS |
| CTGGCCAATCAAAATGCTTA+AGG | 0.400178 | 1.2:+6221647 | None:intergenic |
| ATAGGAGGTGGTGGCGGAGG+TGG | 0.400819 | 1.2:+6222411 | None:intergenic |
| ATTTGTTCAACAATGTGCTT+TGG | 0.404142 | 1.2:-6222544 | MS.gene24559:CDS |
| AACCTTCTACTTGTTTGCTC+AGG | 0.411065 | 1.2:+6223021 | None:intergenic |
| GAAATAGAACATGAAGGTCT+TGG | 0.415313 | 1.2:+6222489 | None:intergenic |
| AGAAACAATGCATGCATTTG+AGG | 0.415984 | 1.2:-6219491 | MS.gene24559:CDS |
| AAATGGCTTATCCGAGCAAT+TGG | 0.418046 | 1.2:-6224595 | MS.gene24559:CDS |
| TCATGAAGAGAGATTCTAGA+AGG | 0.427451 | 1.2:-6222317 | MS.gene24559:CDS |
| TAGTGCAAATAGCTTCAATT+TGG | 0.431295 | 1.2:-6222820 | MS.gene24559:CDS |
| AACAATGTGCTTTGGAGAAG+AGG | 0.433159 | 1.2:-6222536 | MS.gene24559:CDS |
| CTACGAACATCTGCAACATC+TGG | 0.434869 | 1.2:+6222264 | None:intergenic |
| CCTCTAGATGCAAAACTCAT+AGG | 0.434889 | 1.2:+6222393 | None:intergenic |
| GATGTTCGTAGCAGCATGAT+TGG | 0.434922 | 1.2:-6222252 | MS.gene24559:CDS |
| TGACTTTGTTTGAACTTCAA+TGG | 0.436133 | 1.2:+6220895 | None:intergenic |
| ATCTTCAACTGATTTGTTCA+CGG | 0.437733 | 1.2:-6224757 | MS.gene24559:CDS |
| AAGCCGAGGCATCACTGCTC+AGG | 0.449351 | 1.2:-6223058 | MS.gene24559:CDS |
| CTCATAGGAGGTGGTGGCGG+AGG | 0.453395 | 1.2:+6222408 | None:intergenic |
| AGTTTCAAATTCCTGTAGAA+TGG | 0.456163 | 1.2:-6221338 | MS.gene24559:CDS |
| AGAAAAGGAACCTTACTTGT+AGG | 0.459753 | 1.2:-6224455 | MS.gene24559:CDS |
| ATTTGCTTTCAGAATCCATC+AGG | 0.459997 | 1.2:-6220822 | MS.gene24559:intron |
| AGGAGTTGCATATGCAGAAA+AGG | 0.464909 | 1.2:-6224470 | MS.gene24559:CDS |
| TAGCCTGGGATCATCCTTGT+AGG | 0.469351 | 1.2:+6221549 | None:intergenic |
| GGAAAGACAAGAGGAAGATA+AGG | 0.473310 | 1.2:-6224547 | MS.gene24559:CDS |
| TAGAAGAAAGCCTACAAGTA+AGG | 0.477948 | 1.2:+6224445 | None:intergenic |
| TGAAAGCAAATCTCACTCCT+TGG | 0.483345 | 1.2:+6220834 | None:intergenic |
| CTGCTACTCACAACAGATTG+AGG | 0.487231 | 1.2:+6222879 | None:intergenic |
| AGAACCATATAATCCATTGC+AGG | 0.490578 | 1.2:+6220857 | None:intergenic |
| TTCTAATAGCTCAGAGGAAG+AGG | 0.492413 | 1.2:-6222658 | MS.gene24559:CDS |
| CTTTGGAGAAGAGGGCGTTA+AGG | 0.492627 | 1.2:-6222527 | MS.gene24559:CDS |
| AAAAGAAATCGAAAAGGAAT+CGG | 0.496014 | 1.2:-6222580 | MS.gene24559:CDS |
| AATCTCTCTTCATGAGTGAA+TGG | 0.496096 | 1.2:+6222325 | None:intergenic |
| TATTTCTTAGGTGGATGAAA+GGG | 0.500018 | 1.2:-6221674 | MS.gene24559:intron |
| TGTAAATTCATTGATTAGAG+AGG | 0.500507 | 1.2:-6221951 | MS.gene24559:CDS |
| GACCTGAGCAAACAAGTAGA+AGG | 0.501020 | 1.2:-6223023 | MS.gene24559:CDS |
| GCACATTGTTGAACAAATAA+CGG | 0.506477 | 1.2:+6222549 | None:intergenic |
| TTATCAAGCATCCATTCTAC+AGG | 0.515341 | 1.2:+6221327 | None:intergenic |
| TTATTTCTTAGGTGGATGAA+AGG | 0.515856 | 1.2:-6221675 | MS.gene24559:intron |
| GAACATGAAGGTCTTGGAGG+TGG | 0.528351 | 1.2:+6222495 | None:intergenic |
| AAAGAATACATGCTCAACAT+TGG | 0.529178 | 1.2:-6222922 | MS.gene24559:CDS |
| TGTTGAACAAATAACGGCAT+TGG | 0.533882 | 1.2:+6222555 | None:intergenic |
| AGGAGCTAGCCTATTTGAGA+TGG | 0.537341 | 1.2:-6222971 | MS.gene24559:CDS |
| TGCTACTCACAACAGATTGA+GGG | 0.539890 | 1.2:+6222880 | None:intergenic |
| ATCAGAAGTTTCCTCCTACA+AGG | 0.542789 | 1.2:-6221563 | MS.gene24559:CDS |
| TTGAAGTTGTTGAGCTGAGA+AGG | 0.543563 | 1.2:-6224500 | MS.gene24559:CDS |
| CAATCTGTTGTGAGTAGCAG+TGG | 0.547314 | 1.2:-6222876 | MS.gene24559:CDS |
| AGCTAAGTTGAATGCTGAGT+TGG | 0.547558 | 1.2:-6224688 | MS.gene24559:CDS |
| TTGCTAGAAATAGAACATGA+AGG | 0.550243 | 1.2:+6222483 | None:intergenic |
| AAGTGGCTCGATGATGAACT+TGG | 0.556144 | 1.2:-6221881 | MS.gene24559:CDS |
| ATAGAACATGAAGGTCTTGG+AGG | 0.559160 | 1.2:+6222492 | None:intergenic |
| GCAAAACTCATAGGAGGTGG+TGG | 0.559650 | 1.2:+6222402 | None:intergenic |
| ACAAACGAGCAGATTAAATG+AGG | 0.560071 | 1.2:-6222997 | MS.gene24559:CDS |
| TCCCTGTAGAATGGAACGTA+CGG | 0.561761 | 1.2:-6221409 | MS.gene24559:intron |
| TTGTTAATGCAGTTTGCAGG+AGG | 0.565222 | 1.2:-6219523 | MS.gene24559:intron |
| TGTTAATGCAGTTTGCAGGA+GGG | 0.566443 | 1.2:-6219522 | MS.gene24559:intron |
| TCTAGAAGGGATTCTTCAAG+TGG | 0.568375 | 1.2:-6222303 | MS.gene24559:CDS |
| GCAATATCACAAGGTAGCCT+GGG | 0.568968 | 1.2:+6221535 | None:intergenic |
| ATGTTTAAAAGAAATCGAAA+AGG | 0.569919 | 1.2:-6222586 | MS.gene24559:CDS |
| ACAATGTGCTTTGGAGAAGA+GGG | 0.575048 | 1.2:-6222535 | MS.gene24559:CDS |
| TTTATACGCTTCTCCGCACG+AGG | 0.576497 | 1.2:-6221386 | MS.gene24559:CDS |
| TTGGATTGAATCGATTTCGG+AGG | 0.576920 | 1.2:-6222712 | MS.gene24559:CDS |
| ATTGAGTAGGAGCTGTGGAT+TGG | 0.577398 | 1.2:-6224568 | MS.gene24559:CDS |
| GTGTAGGAAGAATCAGAGTG+AGG | 0.578394 | 1.2:-6224661 | MS.gene24559:CDS |
| GAGCAGATTAAATGAGGTGG+AGG | 0.582062 | 1.2:-6222991 | MS.gene24559:CDS |
| TGAGCATGTATTCTTTAACT+CGG | 0.587390 | 1.2:+6222929 | None:intergenic |
| CATGAAGAGAGATTCTAGAA+GGG | 0.589895 | 1.2:-6222316 | MS.gene24559:CDS |
| ACTCAATGCAACCAATTGCT+CGG | 0.590814 | 1.2:+6224584 | None:intergenic |
| AAACTCATAGGAGGTGGTGG+CGG | 0.590815 | 1.2:+6222405 | None:intergenic |
| AAGCCTGAGCAGTGATGCCT+CGG | 0.597575 | 1.2:+6223055 | None:intergenic |
| AAAACGAGCACCACAAGTGG+TGG | 0.598795 | 1.2:-6222355 | MS.gene24559:CDS |
| TTCACTGATGAGAAATTGCA+AGG | 0.600289 | 1.2:-6221361 | MS.gene24559:CDS |
| AGAAGGGATTCTTCAAGTGG+AGG | 0.600617 | 1.2:-6222300 | MS.gene24559:CDS |
| GATGCAAAACTCATAGGAGG+TGG | 0.600680 | 1.2:+6222399 | None:intergenic |
| TTGTTCTGAAAACTCTTCTG+AGG | 0.601816 | 1.2:-6224406 | MS.gene24559:intron |
| ATCTAGAGGTAACACGGCGA+TGG | 0.603006 | 1.2:-6222379 | MS.gene24559:CDS |
| AACGAGCAGATTAAATGAGG+TGG | 0.603393 | 1.2:-6222994 | MS.gene24559:CDS |
| GGAGCTAGCCTATTTGAGAT+GGG | 0.605177 | 1.2:-6222970 | MS.gene24559:CDS |
| CCTCCTACAAGGATGATCCC+AGG | 0.607350 | 1.2:-6221552 | MS.gene24559:CDS |
| TGTTGCCAAATTTAAAGCCG+AGG | 0.609728 | 1.2:-6223072 | MS.gene24559:CDS |
| ATGCTGAGTTGGTTGAGTGT+AGG | 0.613954 | 1.2:-6224677 | MS.gene24559:CDS |
| CCTGGGATCATCCTTGTAGG+AGG | 0.614989 | 1.2:+6221552 | None:intergenic |
| TGGATTGAATCGATTTCGGA+GGG | 0.615092 | 1.2:-6222711 | MS.gene24559:CDS |
| ATGTAGTGGCATTTGTGAAG+TGG | 0.615146 | 1.2:-6221898 | MS.gene24559:CDS |
| TGAGAACATAGATGATGTAG+TGG | 0.615178 | 1.2:-6221912 | MS.gene24559:CDS |
| TGATAATGGAATTATTGGCA+AGG | 0.615864 | 1.2:-6221310 | MS.gene24559:intron |
| CTGTGGATTGGAAAGACAAG+AGG | 0.617229 | 1.2:-6224556 | MS.gene24559:CDS |
| GAAGATTGTCTCCTATGTGT+TGG | 0.627862 | 1.2:+6224774 | None:intergenic |
| ATGGATTATATGGTTCTCCA+AGG | 0.628322 | 1.2:-6220851 | MS.gene24559:CDS |
| TTCTTTAGAGCAATATCACA+AGG | 0.634972 | 1.2:+6221526 | None:intergenic |
| AGACAAGAGGAAGATAAGGA+TGG | 0.637436 | 1.2:-6224543 | MS.gene24559:CDS |
| CTAGATGCAAAACTCATAGG+AGG | 0.640933 | 1.2:+6222396 | None:intergenic |
| CTATGTGTTGGAAAAGCATG+TGG | 0.644463 | 1.2:+6224786 | None:intergenic |
| TGGTACAGTTCCACCACTTG+TGG | 0.647569 | 1.2:+6222345 | None:intergenic |
| GTTGCATTGAGTAGGAGCTG+TGG | 0.648976 | 1.2:-6224573 | MS.gene24559:CDS |
| AGCAATTGGTTGCATTGAGT+AGG | 0.652247 | 1.2:-6224581 | MS.gene24559:CDS |
| GGTAAAACGAGCACCACAAG+TGG | 0.656149 | 1.2:-6222358 | MS.gene24559:CDS |
| ATTTGACAAAGATCCTGCAA+TGG | 0.660224 | 1.2:-6220870 | MS.gene24559:CDS |
| TCATCAGTGAATCCCTCGTG+CGG | 0.664925 | 1.2:+6221373 | None:intergenic |
| GATTAGAGAGGTGAACGATG+CGG | 0.673417 | 1.2:-6221939 | MS.gene24559:CDS |
| AAGGCAGATATTGAAACACA+AGG | 0.674344 | 1.2:-6221980 | MS.gene24559:CDS |
| AGTTCTTTCTCTGATCAATG+TGG | 0.677630 | 1.2:-6222843 | MS.gene24559:CDS |
| CAGCAAGTAAATGTGACGAA+CGG | 0.689590 | 1.2:+6222217 | None:intergenic |
| TTATACGCTTCTCCGCACGA+GGG | 0.706325 | 1.2:-6221385 | MS.gene24559:CDS |
| TAGTGGTTCTAATAGCTCAG+AGG | 0.707483 | 1.2:-6222664 | MS.gene24559:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATAAATAAAGATG+GGG | + | chr1.2:6223889-6223908 | None:intergenic | 10.0% |
| !! | TCAAAAAAAATATGAAAAAA+GGG | - | chr1.2:6220923-6220942 | MS.gene24559:CDS | 10.0% |
| !! | TTCAAAAAAAATATGAAAAA+AGG | - | chr1.2:6220922-6220941 | MS.gene24559:CDS | 10.0% |
| !!! | AGTTAAATTATTTTTGTATA+TGG | - | chr1.2:6220095-6220114 | MS.gene24559:intron | 10.0% |
| !! | AGAAATAGATATTAATATTC+AGG | + | chr1.2:6222256-6222275 | None:intergenic | 15.0% |
| !! | ATATCAAGATTTGAAAAAAT+TGG | - | chr1.2:6222682-6222701 | MS.gene24559:CDS | 15.0% |
| !! | ATTATATTTATATTGGTGAA+TGG | - | chr1.2:6222188-6222207 | MS.gene24559:intron | 15.0% |
| !! | ATTCACCAATATAAATATAA+TGG | + | chr1.2:6222189-6222208 | None:intergenic | 15.0% |
| !! | CAAGAAAATAAAAAGAATTA+AGG | + | chr1.2:6224118-6224137 | None:intergenic | 15.0% |
| !! | TTATGAAAATAAGCTTAAAA+AGG | - | chr1.2:6220158-6220177 | MS.gene24559:intron | 15.0% |
| !!! | AAGAAACATATTTTTGTTAT+TGG | + | chr1.2:6223103-6223122 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTAGATAAAACT+AGG | - | chr1.2:6223313-6223332 | MS.gene24559:intron | 15.0% |
| !!! | ATTTTAGTTTATTTTGATGA+CGG | - | chr1.2:6224418-6224437 | MS.gene24559:CDS | 15.0% |
| !!! | TAACAAAAATATGTTTCTTT+TGG | - | chr1.2:6223104-6223123 | MS.gene24559:intron | 15.0% |
| !!! | TGTTATTTATTGATCTATTA+AGG | - | chr1.2:6223171-6223190 | MS.gene24559:intron | 15.0% |
| !!! | TTGTGTATATATTATTTCTT+AGG | - | chr1.2:6222583-6222602 | MS.gene24559:CDS | 15.0% |
| !! | AAATTCGACATGAAAAATTA+TGG | + | chr1.2:6222117-6222136 | None:intergenic | 20.0% |
| !! | AATTATGGCATTTAATAAGT+TGG | + | chr1.2:6222102-6222121 | None:intergenic | 20.0% |
| !! | ATAATCTAAATATAGTCACA+AGG | + | chr1.2:6224027-6224046 | None:intergenic | 20.0% |
| !! | ATAGTATCATTGACAAAAAT+TGG | - | chr1.2:6221538-6221557 | MS.gene24559:CDS | 20.0% |
| !! | ATGTTTAAAAGAAATCGAAA+AGG | - | chr1.2:6221683-6221702 | MS.gene24559:intron | 20.0% |
| !! | ATTTCTTAACATACAGATAA+AGG | - | chr1.2:6222270-6222289 | MS.gene24559:CDS | 20.0% |
| !! | GCTTATTTAAATTTACCTAT+TGG | + | chr1.2:6220497-6220516 | None:intergenic | 20.0% |
| !! | GTATATGTAAATTAGAATAG+AGG | - | chr1.2:6220599-6220618 | MS.gene24559:intron | 20.0% |
| !! | TATTAGTATTCAAGATATCA+TGG | + | chr1.2:6222217-6222236 | None:intergenic | 20.0% |
| !! | TGAAGCCATTATATTTATAT+TGG | - | chr1.2:6222181-6222200 | MS.gene24559:intron | 20.0% |
| !! | TTATTGGATGAAAAAACAAT+TGG | + | chr1.2:6223087-6223106 | None:intergenic | 20.0% |
| !!! | AATTTTGAATGATCGATTTT+TGG | - | chr1.2:6224355-6224374 | MS.gene24559:intron | 20.0% |
| !!! | ACACAATTTTTTTTTCTCAT+GGG | - | chr1.2:6219924-6219943 | MS.gene24559:intron | 20.0% |
| !!! | TATACAACTTGTTTTAACAT+TGG | - | chr1.2:6223283-6223302 | MS.gene24559:intron | 20.0% |
| !!! | TGTAGGAGTATTTTTTTTTA+AGG | + | chr1.2:6220878-6220897 | None:intergenic | 20.0% |
| !!! | TGTATATATTATTTCTTAGG+TGG | - | chr1.2:6222586-6222605 | MS.gene24559:CDS | 20.0% |
| !!! | TTTAATAAGTTGGATACATA+AGG | + | chr1.2:6222092-6222111 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTTACTGGAAAG+TGG | - | chr1.2:6223905-6223924 | MS.gene24559:intron | 20.0% |
| ! | AAAACTAGGATCAGTTAAAT+TGG | - | chr1.2:6223327-6223346 | MS.gene24559:intron | 25.0% |
| ! | AAAAGAAATCGAAAAGGAAT+CGG | - | chr1.2:6221689-6221708 | MS.gene24559:intron | 25.0% |
| ! | AAATGATCACTACTAGTTAT+TGG | + | chr1.2:6221495-6221514 | None:intergenic | 25.0% |
| ! | ACACTTGTAATACTTGATTT+GGG | - | chr1.2:6220630-6220649 | MS.gene24559:intron | 25.0% |
| ! | ACTTATTTCAACTTACTGTT+TGG | - | chr1.2:6220960-6220979 | MS.gene24559:intron | 25.0% |
| ! | AGATACTGAAGTATATTATG+TGG | + | chr1.2:6223479-6223498 | None:intergenic | 25.0% |
| ! | ATAAGCTATAAGCTATATCA+GGG | - | chr1.2:6220132-6220151 | MS.gene24559:intron | 25.0% |
| ! | ATACACTAACCTAAGTTAAA+TGG | + | chr1.2:6221053-6221072 | None:intergenic | 25.0% |
| ! | ATATATAAATAAAGATGGGG+TGG | + | chr1.2:6223886-6223905 | None:intergenic | 25.0% |
| ! | ATCTGATATTGCTTCTTTAT+AGG | - | chr1.2:6223257-6223276 | MS.gene24559:intron | 25.0% |
| ! | CACATATTATAATTCTGTGA+TGG | + | chr1.2:6222500-6222519 | None:intergenic | 25.0% |
| ! | GATACTGAAGTATATTATGT+GGG | + | chr1.2:6223478-6223497 | None:intergenic | 25.0% |
| ! | GCAGATCTACATTATATTAT+AGG | - | chr1.2:6223687-6223706 | MS.gene24559:intron | 25.0% |
| ! | TACACTTGTAATACTTGATT+TGG | - | chr1.2:6220629-6220648 | MS.gene24559:intron | 25.0% |
| ! | TATAAGCTATAAGCTATATC+AGG | - | chr1.2:6220131-6220150 | MS.gene24559:intron | 25.0% |
| ! | TATGTAAATTAGAATAGAGG+AGG | - | chr1.2:6220602-6220621 | MS.gene24559:intron | 25.0% |
| ! | TGGAATAGAAGATATGAATA+GGG | - | chr1.2:6219956-6219975 | MS.gene24559:intron | 25.0% |
| ! | TGGTCATAATATTCACAATT+AGG | + | chr1.2:6224507-6224526 | None:intergenic | 25.0% |
| ! | TGTTAGAGAGTTTATGAAAA+CGG | + | chr1.2:6220205-6220224 | None:intergenic | 25.0% |
| ! | TTCTAATTTACATATACACC+TGG | + | chr1.2:6220596-6220615 | None:intergenic | 25.0% |
| ! | TTGGAATAGAAGATATGAAT+AGG | - | chr1.2:6219955-6219974 | MS.gene24559:intron | 25.0% |
| ! | TTGTTAGAAGAAGAGAAAAA+TGG | - | chr1.2:6219657-6219676 | MS.gene24559:intron | 25.0% |
| ! | TTGTTTGGATAAACAACTTA+GGG | - | chr1.2:6219981-6220000 | MS.gene24559:intron | 25.0% |
| ! | TTTGTTTGGATAAACAACTT+AGG | - | chr1.2:6219980-6219999 | MS.gene24559:intron | 25.0% |
| !! | AAATTGGATTGAATCGATTT+CGG | - | chr1.2:6221554-6221573 | MS.gene24559:CDS | 25.0% |
| !! | ATAGGACATGTTTATTTCTT+AGG | + | chr1.2:6223651-6223670 | None:intergenic | 25.0% |
| !! | ATCATAAAAGCACAATATGA+AGG | + | chr1.2:6221161-6221180 | None:intergenic | 25.0% |
| !! | GGCTAAAAAGTATATGAAAA+GGG | - | chr1.2:6223348-6223367 | MS.gene24559:intron | 25.0% |
| !! | GTTTTTCTTATCAACTCTTT+AGG | + | chr1.2:6223146-6223165 | None:intergenic | 25.0% |
| !! | TGGCTAAAAAGTATATGAAA+AGG | - | chr1.2:6223347-6223366 | MS.gene24559:intron | 25.0% |
| !! | TGTAAATTCATTGATTAGAG+AGG | - | chr1.2:6222318-6222337 | MS.gene24559:CDS | 25.0% |
| !!! | ATGCTTGATAATGGAATTAT+TGG | - | chr1.2:6222954-6222973 | MS.gene24559:CDS | 25.0% |
| !!! | ATTAGGTTCAGTTTTAGTTT+TGG | + | chr1.2:6224490-6224509 | None:intergenic | 25.0% |
| !!! | CCTTCTATATTTTAGTTTCA+GGG | + | chr1.2:6224078-6224097 | None:intergenic | 25.0% |
| !!! | GACACAATTTTTTTTTCTCA+TGG | - | chr1.2:6219923-6219942 | MS.gene24559:intron | 25.0% |
| !!! | GGTTGATTCAATTTTTGTAT+GGG | - | chr1.2:6219901-6219920 | MS.gene24559:intron | 25.0% |
| !!! | TGATATTGCTCTAAAGAAAA+TGG | - | chr1.2:6222748-6222767 | MS.gene24559:CDS | 25.0% |
| !!! | TGGTTGATTCAATTTTTGTA+TGG | - | chr1.2:6219900-6219919 | MS.gene24559:intron | 25.0% |
| !!! | TTATAATTCTGTGATGGATA+AGG | + | chr1.2:6222494-6222513 | None:intergenic | 25.0% |
| AAAGAATACATGCTCAACAT+TGG | - | chr1.2:6221347-6221366 | MS.gene24559:CDS | 30.0% | |
| AAAGGCTTGTAAAATGTACA+TGG | + | chr1.2:6220432-6220451 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr1.2:6220007-6220026 | None:intergenic | 30.0% | |
| AATAGAAAATAGCATCAGCT+AGG | + | chr1.2:6223946-6223965 | None:intergenic | 30.0% | |
| ACCAAAATATTGCATTCACA+TGG | - | chr1.2:6222150-6222169 | MS.gene24559:intron | 30.0% | |
| AGAAGAAGACATTCAATTAG+TGG | - | chr1.2:6221588-6221607 | MS.gene24559:CDS | 30.0% | |
| AGCTTATGATGAGTCAAAAA+AGG | - | chr1.2:6224312-6224331 | MS.gene24559:intron | 30.0% | |
| AGTTTCAAATTCCTGTAGAA+TGG | - | chr1.2:6222931-6222950 | MS.gene24559:CDS | 30.0% | |
| ATAGAAAATAGCATCAGCTA+GGG | + | chr1.2:6223945-6223964 | None:intergenic | 30.0% | |
| ATGAATAACTGTAAGCTTGT+AGG | + | chr1.2:6220895-6220914 | None:intergenic | 30.0% | |
| ATTCAGGATGTTCATGAAAT+AGG | + | chr1.2:6222240-6222259 | None:intergenic | 30.0% | |
| ATTGGCAAGGTATACTATAA+TGG | - | chr1.2:6222972-6222991 | MS.gene24559:CDS | 30.0% | |
| ATTTGTTCAACAATGTGCTT+TGG | - | chr1.2:6221725-6221744 | MS.gene24559:intron | 30.0% | |
| CCCTGAAACTAAAATATAGA+AGG | - | chr1.2:6224075-6224094 | MS.gene24559:intron | 30.0% | |
| GCACATTGTTGAACAAATAA+CGG | + | chr1.2:6221723-6221742 | None:intergenic | 30.0% | |
| GGAGGAAATACAAAGAATTA+AGG | + | chr1.2:6224057-6224076 | None:intergenic | 30.0% | |
| TACAAGCTTACAGTTATTCA+TGG | - | chr1.2:6220894-6220913 | MS.gene24559:CDS | 30.0% | |
| TAGTGCAAATAGCTTCAATT+TGG | - | chr1.2:6221449-6221468 | MS.gene24559:intron | 30.0% | |
| TATGCACAAAGATACTTACA+AGG | + | chr1.2:6222417-6222436 | None:intergenic | 30.0% | |
| TATTTCTTAGGTGGATGAAA+GGG | - | chr1.2:6222595-6222614 | MS.gene24559:CDS | 30.0% | |
| TGAGCATGTATTCTTTAACT+CGG | + | chr1.2:6221343-6221362 | None:intergenic | 30.0% | |
| TGATACAGTAAGTCTTTACA+TGG | + | chr1.2:6222462-6222481 | None:intergenic | 30.0% | |
| TGATCTATTAAGGATTATGC+TGG | - | chr1.2:6223181-6223200 | MS.gene24559:intron | 30.0% | |
| TGATTCTTCTTGATGCAATT+TGG | + | chr1.2:6224550-6224569 | None:intergenic | 30.0% | |
| TTAGTAACAAAGACAGATTC+AGG | + | chr1.2:6224694-6224713 | None:intergenic | 30.0% | |
| TTGCTAGAAATAGAACATGA+AGG | + | chr1.2:6221789-6221808 | None:intergenic | 30.0% | |
| TTTGGTTAGAAAAGAATCAG+TGG | + | chr1.2:6224472-6224491 | None:intergenic | 30.0% | |
| ! | ACCTGTGAGATTATTAGTTT+CGG | + | chr1.2:6220467-6220486 | None:intergenic | 30.0% |
| ! | CTGAGGTAATTTTTGCAATT+TGG | - | chr1.2:6219880-6219899 | MS.gene24559:intron | 30.0% |
| ! | CTTGCAAATTCTTTCTAGTA+GGG | - | chr1.2:6224231-6224250 | MS.gene24559:intron | 30.0% |
| ! | GAAGAAACATCGATTAACAA+TGG | + | chr1.2:6223528-6223547 | None:intergenic | 30.0% |
| ! | GATTCAGGAATTTTATGTTG+TGG | + | chr1.2:6224679-6224698 | None:intergenic | 30.0% |
| ! | TATTTGTTAATGCAGTTTGC+AGG | - | chr1.2:6224743-6224762 | MS.gene24559:CDS | 30.0% |
| ! | TCTTGCAAATTCTTTCTAGT+AGG | - | chr1.2:6224230-6224249 | MS.gene24559:intron | 30.0% |
| ! | TGACTTTGTTTGAACTTCAA+TGG | + | chr1.2:6223377-6223396 | None:intergenic | 30.0% |
| ! | TGTTTATTTCTTAGGCTGTT+CGG | + | chr1.2:6223643-6223662 | None:intergenic | 30.0% |
| ! | TTATTTCTTAGGTGGATGAA+AGG | - | chr1.2:6222594-6222613 | MS.gene24559:CDS | 30.0% |
| !! | ATCTTCAACTGATTTGTTCA+CGG | - | chr1.2:6219512-6219531 | MS.gene24559:CDS | 30.0% |
| !! | TGATAATGGAATTATTGGCA+AGG | - | chr1.2:6222959-6222978 | MS.gene24559:CDS | 30.0% |
| !! | TTCTTTAGAGCAATATCACA+AGG | + | chr1.2:6222746-6222765 | None:intergenic | 30.0% |
| !!! | AGTCGCAGTTTAGTTTTTTT+TGG | - | chr1.2:6224601-6224620 | MS.gene24559:CDS | 30.0% |
| !!! | ATTGAGTTGATTCTTTTCAC+TGG | - | chr1.2:6223828-6223847 | MS.gene24559:intron | 30.0% |
| !!! | CAGTTTAGTTTTTTTTGGTG+CGG | - | chr1.2:6224606-6224625 | MS.gene24559:CDS | 30.0% |
| !!! | GCCTTCTATATTTTAGTTTC+AGG | + | chr1.2:6224079-6224098 | None:intergenic | 30.0% |
| !!! | TCTATATTTTAGTTTCAGGG+AGG | + | chr1.2:6224075-6224094 | None:intergenic | 30.0% |
| !!! | TTTTTGAAGTTCCTAGAAGA+CGG | + | chr1.2:6223225-6223244 | None:intergenic | 30.0% |
| !!! | TTTTTTTTCTCATGGGTTGT+TGG | - | chr1.2:6219931-6219950 | MS.gene24559:intron | 30.0% |
| AAGGCAGATATTGAAACACA+AGG | - | chr1.2:6222289-6222308 | MS.gene24559:CDS | 35.0% | |
| AATCTCTCTTCATGAGTGAA+TGG | + | chr1.2:6221947-6221966 | None:intergenic | 35.0% | |
| ACAAACGAGCAGATTAAATG+AGG | - | chr1.2:6221272-6221291 | MS.gene24559:intron | 35.0% | |
| ACATTAAGAGAAGCAGCATT+TGG | - | chr1.2:6222659-6222678 | MS.gene24559:CDS | 35.0% | |
| ACCTACGATTGTTCATGAAT+CGG | - | chr1.2:6223720-6223739 | MS.gene24559:intron | 35.0% | |
| AGAAAAGGAACCTTACTTGT+AGG | - | chr1.2:6219814-6219833 | MS.gene24559:intron | 35.0% | |
| AGAAACAATGCATGCATTTG+AGG | - | chr1.2:6224778-6224797 | MS.gene24559:CDS | 35.0% | |
| AGAACCATATAATCCATTGC+AGG | + | chr1.2:6223415-6223434 | None:intergenic | 35.0% | |
| AGTTCTTTCTCTGATCAATG+TGG | - | chr1.2:6221426-6221445 | MS.gene24559:intron | 35.0% | |
| ATAAACCAATATAGCGCAGA+GGG | + | chr1.2:6223979-6223998 | None:intergenic | 35.0% | |
| ATAAGTGTGCACTTGATCAA+GGG | + | chr1.2:6220287-6220306 | None:intergenic | 35.0% | |
| ATATAATGTAGATCTGCCCT+TGG | + | chr1.2:6223684-6223703 | None:intergenic | 35.0% | |
| ATTATGTGGGAAATACCTGA+TGG | + | chr1.2:6223465-6223484 | None:intergenic | 35.0% | |
| ATTTGACAAAGATCCTGCAA+TGG | - | chr1.2:6223399-6223418 | MS.gene24559:intron | 35.0% | |
| ATTTGCAGCTTATAGCACAA+GGG | - | chr1.2:6220024-6220043 | MS.gene24559:intron | 35.0% | |
| ATTTGCTTTCAGAATCCATC+AGG | - | chr1.2:6223447-6223466 | MS.gene24559:intron | 35.0% | |
| GAAATAGAACATGAAGGTCT+TGG | + | chr1.2:6221783-6221802 | None:intergenic | 35.0% | |
| GGCTTATTTGAGCTTATCTA+CGG | + | chr1.2:6220246-6220265 | None:intergenic | 35.0% | |
| GTAGAATGGATGCTTGATAA+TGG | - | chr1.2:6222945-6222964 | MS.gene24559:CDS | 35.0% | |
| GTTCATGGTTCAGTTAAAGT+AGG | - | chr1.2:6223788-6223807 | MS.gene24559:intron | 35.0% | |
| TACTTGTAGGCTTTCTTCTA+TGG | - | chr1.2:6219827-6219846 | MS.gene24559:intron | 35.0% | |
| TAGAAGAAAGCCTACAAGTA+AGG | + | chr1.2:6219827-6219846 | None:intergenic | 35.0% | |
| TATAAATAAAGATGGGGTGG+CGG | + | chr1.2:6223883-6223902 | None:intergenic | 35.0% | |
| TATAAGTGTGCACTTGATCA+AGG | + | chr1.2:6220288-6220307 | None:intergenic | 35.0% | |
| TATTTGCAGCTTATAGCACA+AGG | - | chr1.2:6220023-6220042 | MS.gene24559:intron | 35.0% | |
| TCATGAAGAGAGATTCTAGA+AGG | - | chr1.2:6221952-6221971 | MS.gene24559:CDS | 35.0% | |
| TCCGAAACTAATAATCTCAC+AGG | - | chr1.2:6220463-6220482 | MS.gene24559:intron | 35.0% | |
| TGAGAACATAGATGATGTAG+TGG | - | chr1.2:6222357-6222376 | MS.gene24559:CDS | 35.0% | |
| TGTTGAACAAATAACGGCAT+TGG | + | chr1.2:6221717-6221736 | None:intergenic | 35.0% | |
| TGTTGTTGCAAACAATTTCC+AGG | - | chr1.2:6220575-6220594 | MS.gene24559:intron | 35.0% | |
| TTATCAAGCATCCATTCTAC+AGG | + | chr1.2:6222945-6222964 | None:intergenic | 35.0% | |
| TTCACTGATGAGAAATTGCA+AGG | - | chr1.2:6222908-6222927 | MS.gene24559:CDS | 35.0% | |
| ! | AGCTAGAAGTTGATCAAAAC+TGG | + | chr1.2:6220817-6220836 | None:intergenic | 35.0% |
| ! | AGGAATTTTATGTTGTGGCT+AGG | + | chr1.2:6224674-6224693 | None:intergenic | 35.0% |
| ! | ATGGATTATATGGTTCTCCA+AGG | - | chr1.2:6223418-6223437 | MS.gene24559:intron | 35.0% |
| ! | CATGAAGAGAGATTCTAGAA+GGG | - | chr1.2:6221953-6221972 | MS.gene24559:CDS | 35.0% |
| ! | GAAACATCGATTAACAATGG+AGG | + | chr1.2:6223525-6223544 | None:intergenic | 35.0% |
| ! | GCCATGTGAATGCAATATTT+TGG | + | chr1.2:6222154-6222173 | None:intergenic | 35.0% |
| ! | GCTAGAAGTTGATCAAAACT+GGG | + | chr1.2:6220816-6220835 | None:intergenic | 35.0% |
| ! | TATTAGTTTCGGAGAGCTTA+TGG | + | chr1.2:6220456-6220475 | None:intergenic | 35.0% |
| ! | TTTTGCATCTAGAGGTAACA+CGG | - | chr1.2:6221884-6221903 | MS.gene24559:CDS | 35.0% |
| !! | AAGCTTGTTACAAGAGTCTA+AGG | - | chr1.2:6219551-6219570 | MS.gene24559:intron | 35.0% |
| !! | AGATCCTGCAATGGATTATA+TGG | - | chr1.2:6223408-6223427 | MS.gene24559:intron | 35.0% |
| !! | CTGTCCTTAAGCATTTTGAT+TGG | - | chr1.2:6222618-6222637 | MS.gene24559:CDS | 35.0% |
| !! | CTTTGTCCATGCTTTTAAGT+TGG | - | chr1.2:6223497-6223516 | MS.gene24559:intron | 35.0% |
| !! | GATATGAATAGGGCTTTGTT+TGG | - | chr1.2:6219966-6219985 | MS.gene24559:intron | 35.0% |
| !! | TCCTATTGAGTATTGACCAA+GGG | - | chr1.2:6223665-6223684 | MS.gene24559:intron | 35.0% |
| !! | TGGCATTGATGAATATGTGA+AGG | - | chr1.2:6222992-6223011 | MS.gene24559:CDS | 35.0% |
| !! | TTGTTCTGAAAACTCTTCTG+AGG | - | chr1.2:6219863-6219882 | MS.gene24559:intron | 35.0% |
| !!! | CTAGTTATTGGCCACTTTTT+CGG | + | chr1.2:6221483-6221502 | None:intergenic | 35.0% |
| !!! | TTAGTTTTTTTTGGTGCGGT+TGG | - | chr1.2:6224610-6224629 | MS.gene24559:CDS | 35.0% |
| AAATGGCTTATCCGAGCAAT+TGG | - | chr1.2:6219674-6219693 | MS.gene24559:intron | 40.0% | |
| AACCTTCTACTTGTTTGCTC+AGG | + | chr1.2:6221251-6221270 | None:intergenic | 40.0% | |
| AACGAGCAGATTAAATGAGG+TGG | - | chr1.2:6221275-6221294 | MS.gene24559:intron | 40.0% | |
| AATGTGTCAGCTTTCTTCTC+TGG | + | chr1.2:6222644-6222663 | None:intergenic | 40.0% | |
| ACCTAAGTTAAATGGCAGTG+TGG | + | chr1.2:6221045-6221064 | None:intergenic | 40.0% | |
| ACTCAATGCAACCAATTGCT+CGG | + | chr1.2:6219688-6219707 | None:intergenic | 40.0% | |
| ACTGAACCATGAACAATCCT+AGG | + | chr1.2:6223782-6223801 | None:intergenic | 40.0% | |
| AGACAAGAGGAAGATAAGGA+TGG | - | chr1.2:6219726-6219745 | MS.gene24559:intron | 40.0% | |
| AGCAATTGGTTGCATTGAGT+AGG | - | chr1.2:6219688-6219707 | MS.gene24559:intron | 40.0% | |
| AGCTAATCCAAACAATTCCG+AGG | - | chr1.2:6220514-6220533 | MS.gene24559:intron | 40.0% | |
| AGGAGTTGCATATGCAGAAA+AGG | - | chr1.2:6219799-6219818 | MS.gene24559:intron | 40.0% | |
| ATAGAACATGAAGGTCTTGG+AGG | + | chr1.2:6221780-6221799 | None:intergenic | 40.0% | |
| ATCAGAAGTTTCCTCCTACA+AGG | - | chr1.2:6222706-6222725 | MS.gene24559:CDS | 40.0% | |
| ATGTAGTGGCATTTGTGAAG+TGG | - | chr1.2:6222371-6222390 | MS.gene24559:CDS | 40.0% | |
| CAGCAAGTAAATGTGACGAA+CGG | + | chr1.2:6222055-6222074 | None:intergenic | 40.0% | |
| CCTCTAGATGCAAAACTCAT+AGG | + | chr1.2:6221879-6221898 | None:intergenic | 40.0% | |
| CGAATTCACCCATCTCAAAT+AGG | + | chr1.2:6221310-6221329 | None:intergenic | 40.0% | |
| CTAGATGCAAAACTCATAGG+AGG | + | chr1.2:6221876-6221895 | None:intergenic | 40.0% | |
| CTGGCCAATCAAAATGCTTA+AGG | + | chr1.2:6222625-6222644 | None:intergenic | 40.0% | |
| GAAGATTGTCTCCTATGTGT+TGG | + | chr1.2:6219498-6219517 | None:intergenic | 40.0% | |
| GAGCCAGACAAAAAAGTTTG+GGG | + | chr1.2:6224447-6224466 | None:intergenic | 40.0% | |
| GATAAACCAATATAGCGCAG+AGG | + | chr1.2:6223980-6223999 | None:intergenic | 40.0% | |
| GGAAAGACAAGAGGAAGATA+AGG | - | chr1.2:6219722-6219741 | MS.gene24559:intron | 40.0% | |
| GGAGCCAGACAAAAAAGTTT+GGG | + | chr1.2:6224448-6224467 | None:intergenic | 40.0% | |
| GGGTGATTTATCATGTTCTC+AGG | - | chr1.2:6219455-6219474 | MS.gene24559:CDS | 40.0% | |
| GGTTAGAAAAGAATCAGTGG+CGG | + | chr1.2:6224469-6224488 | None:intergenic | 40.0% | |
| GTTTGTGTTTCCCTGTAGAA+TGG | - | chr1.2:6222851-6222870 | MS.gene24559:CDS | 40.0% | |
| TAAACAACTTAGGGCCTGTT+TGG | - | chr1.2:6219990-6220009 | MS.gene24559:intron | 40.0% | |
| TCACAGGTACTTATGCCAAT+AGG | - | chr1.2:6220479-6220498 | MS.gene24559:intron | 40.0% | |
| TCTAGAAGGGATTCTTCAAG+TGG | - | chr1.2:6221966-6221985 | MS.gene24559:CDS | 40.0% | |
| TGAAAGCAAATCTCACTCCT+TGG | + | chr1.2:6223438-6223457 | None:intergenic | 40.0% | |
| TGAGCTGAGAAGGTTGAATA+AGG | - | chr1.2:6219779-6219798 | MS.gene24559:intron | 40.0% | |
| TGCTACTCACAACAGATTGA+GGG | + | chr1.2:6221392-6221411 | None:intergenic | 40.0% | |
| TGGAAAGTGGATGCTGAAAA+AGG | - | chr1.2:6223918-6223937 | MS.gene24559:intron | 40.0% | |
| TGGTTAAGAAGCCGAAAAAG+TGG | - | chr1.2:6221469-6221488 | MS.gene24559:intron | 40.0% | |
| TGTTAATGCAGTTTGCAGGA+GGG | - | chr1.2:6224747-6224766 | MS.gene24559:CDS | 40.0% | |
| TGTTGCATTACTATGAGAGC+AGG | - | chr1.2:6223036-6223055 | MS.gene24559:CDS | 40.0% | |
| TTCATGAACAATCGTAGGTG+AGG | + | chr1.2:6223719-6223738 | None:intergenic | 40.0% | |
| TTCTAATAGCTCAGAGGAAG+AGG | - | chr1.2:6221611-6221630 | MS.gene24559:CDS | 40.0% | |
| TTGAAGTTGTTGAGCTGAGA+AGG | - | chr1.2:6219769-6219788 | MS.gene24559:intron | 40.0% | |
| TTGTTAATGCAGTTTGCAGG+AGG | - | chr1.2:6224746-6224765 | MS.gene24559:CDS | 40.0% | |
| TTTCGGAGAGCTTATGGAAA+AGG | + | chr1.2:6220450-6220469 | None:intergenic | 40.0% | |
| ! | ACCGATTCATGAACAATCGT+AGG | + | chr1.2:6223724-6223743 | None:intergenic | 40.0% |
| ! | AGCTAAGTTGAATGCTGAGT+TGG | - | chr1.2:6219581-6219600 | MS.gene24559:intron | 40.0% |
| ! | ATCAAGGGCATGTTTGGAAT+TGG | + | chr1.2:6220272-6220291 | None:intergenic | 40.0% |
| ! | CACATGCTTTTCCAACACAT+AGG | - | chr1.2:6219484-6219503 | MS.gene24559:CDS | 40.0% |
| ! | CCTATGAGTTTTGCATCTAG+AGG | - | chr1.2:6221876-6221895 | MS.gene24559:CDS | 40.0% |
| ! | CTATGTGTTGGAAAAGCATG+TGG | + | chr1.2:6219486-6219505 | None:intergenic | 40.0% |
| ! | CTGTTCGGTGATTCTAGAAA+AGG | + | chr1.2:6223628-6223647 | None:intergenic | 40.0% |
| ! | TCCACACTGCCATTTAACTT+AGG | - | chr1.2:6221041-6221060 | MS.gene24559:intron | 40.0% |
| ! | TGGATTGAATCGATTTCGGA+GGG | - | chr1.2:6221558-6221577 | MS.gene24559:CDS | 40.0% |
| ! | TGTTGCCAAATTTAAAGCCG+AGG | - | chr1.2:6221197-6221216 | MS.gene24559:intron | 40.0% |
| ! | TTGGATTGAATCGATTTCGG+AGG | - | chr1.2:6221557-6221576 | MS.gene24559:CDS | 40.0% |
| ! | TTTCTCATGGGTTGTTGGAT+TGG | - | chr1.2:6219936-6219955 | MS.gene24559:intron | 40.0% |
| !! | AACAATGTGCTTTGGAGAAG+AGG | - | chr1.2:6221733-6221752 | MS.gene24559:intron | 40.0% |
| !! | AACTGATTTGTTCACGGAGT+TGG | - | chr1.2:6219518-6219537 | MS.gene24559:intron | 40.0% |
| !! | ACAATGTGCTTTGGAGAAGA+GGG | - | chr1.2:6221734-6221753 | MS.gene24559:intron | 40.0% |
| !! | GAGTTGATTCTTTTCACTGG+CGG | - | chr1.2:6223831-6223850 | MS.gene24559:intron | 40.0% |
| !! | GTCCTATTGAGTATTGACCA+AGG | - | chr1.2:6223664-6223683 | MS.gene24559:intron | 40.0% |
| !! | TAGTGGTTCTAATAGCTCAG+AGG | - | chr1.2:6221605-6221624 | MS.gene24559:CDS | 40.0% |
| !! | TGATGCCTCGGCTTTAAATT+TGG | + | chr1.2:6221205-6221224 | None:intergenic | 40.0% |
| !!! | TTTTGGTGCGGTTGGTTTAA+CGG | - | chr1.2:6224618-6224637 | MS.gene24559:CDS | 40.0% |
| AACCGTACGTTCCATTCTAC+AGG | + | chr1.2:6222865-6222884 | None:intergenic | 45.0% | |
| AAGTGGCTCGATGATGAACT+TGG | - | chr1.2:6222388-6222407 | MS.gene24559:CDS | 45.0% | |
| ACCGTACGTTCCATTCTACA+GGG | + | chr1.2:6222864-6222883 | None:intergenic | 45.0% | |
| AGAAGGGATTCTTCAAGTGG+AGG | - | chr1.2:6221969-6221988 | MS.gene24559:CDS | 45.0% | |
| AGCAATATCACAAGGTAGCC+TGG | + | chr1.2:6222738-6222757 | None:intergenic | 45.0% | |
| AGTTCCTAGAAGACGGTCAT+AGG | + | chr1.2:6223218-6223237 | None:intergenic | 45.0% | |
| ATTGAGTAGGAGCTGTGGAT+TGG | - | chr1.2:6219701-6219720 | MS.gene24559:intron | 45.0% | |
| CAATCTGTTGTGAGTAGCAG+TGG | - | chr1.2:6221393-6221412 | MS.gene24559:CDS | 45.0% | |
| CCAGACAAAAAAGTTTGGGG+TGG | + | chr1.2:6224444-6224463 | None:intergenic | 45.0% | |
| CGGAGCCAGACAAAAAAGTT+TGG | + | chr1.2:6224449-6224468 | None:intergenic | 45.0% | |
| CTACGAACATCTGCAACATC+TGG | + | chr1.2:6222008-6222027 | None:intergenic | 45.0% | |
| CTGCTACTCACAACAGATTG+AGG | + | chr1.2:6221393-6221412 | None:intergenic | 45.0% | |
| GACCTGAGCAAACAAGTAGA+AGG | - | chr1.2:6221246-6221265 | MS.gene24559:intron | 45.0% | |
| GAGCAGATTAAATGAGGTGG+AGG | - | chr1.2:6221278-6221297 | MS.gene24559:intron | 45.0% | |
| GATGCAAAACTCATAGGAGG+TGG | + | chr1.2:6221873-6221892 | None:intergenic | 45.0% | |
| GATGTTCGTAGCAGCATGAT+TGG | - | chr1.2:6222017-6222036 | MS.gene24559:intron | 45.0% | |
| GATTAGAGAGGTGAACGATG+CGG | - | chr1.2:6222330-6222349 | MS.gene24559:CDS | 45.0% | |
| GCAATATCACAAGGTAGCCT+GGG | + | chr1.2:6222737-6222756 | None:intergenic | 45.0% | |
| GCCCTTGGTCAATACTCAAT+AGG | + | chr1.2:6223669-6223688 | None:intergenic | 45.0% | |
| GTATCCTATGACCGTCTTCT+AGG | - | chr1.2:6223211-6223230 | MS.gene24559:intron | 45.0% | |
| GTGTAGGAAGAATCAGAGTG+AGG | - | chr1.2:6219608-6219627 | MS.gene24559:intron | 45.0% | |
| TCCCTGTAGAATGGAACGTA+CGG | - | chr1.2:6222860-6222879 | MS.gene24559:CDS | 45.0% | |
| ! | AAGCTTTATCCCACTGAGTG+GGG | + | chr1.2:6220549-6220568 | None:intergenic | 45.0% |
| ! | AGGAGCTAGCCTATTTGAGA+TGG | - | chr1.2:6221298-6221317 | MS.gene24559:intron | 45.0% |
| ! | ATTCTTTTCACTGGCGGAAC+TGG | - | chr1.2:6223837-6223856 | MS.gene24559:intron | 45.0% |
| ! | CAAGCTTTATCCCACTGAGT+GGG | + | chr1.2:6220550-6220569 | None:intergenic | 45.0% |
| ! | CACTTGATCAAGGGCATGTT+TGG | + | chr1.2:6220278-6220297 | None:intergenic | 45.0% |
| ! | CGGTGATTCTAGAAAAGGTC+CGG | + | chr1.2:6223623-6223642 | None:intergenic | 45.0% |
| ! | GAGGCACCAACTTAAAAGCA+TGG | + | chr1.2:6223506-6223525 | None:intergenic | 45.0% |
| ! | GGAGCTAGCCTATTTGAGAT+GGG | - | chr1.2:6221299-6221318 | MS.gene24559:intron | 45.0% |
| ! | GGGCATGTTTGGAATTGGAT+TGG | + | chr1.2:6220267-6220286 | None:intergenic | 45.0% |
| ! | TTCTTTTCACTGGCGGAACT+GGG | - | chr1.2:6223838-6223857 | MS.gene24559:intron | 45.0% |
| !! | ATGCTGAGTTGGTTGAGTGT+AGG | - | chr1.2:6219592-6219611 | MS.gene24559:intron | 45.0% |
| !! | CTGTGGATTGGAAAGACAAG+AGG | - | chr1.2:6219713-6219732 | MS.gene24559:intron | 45.0% |
| !! | GATCAACTTCTAGCTCGTGA+AGG | - | chr1.2:6220822-6220841 | MS.gene24559:intron | 45.0% |
| !!! | CCACCCCAAACTTTTTTGTC+TGG | - | chr1.2:6224441-6224460 | MS.gene24559:CDS | 45.0% |
| !! | AAAAAATATATAAATAAAGA+TGG | + | chr1.2:6223891-6223910 | None:intergenic | 5.0% |
| !! | AAAAATATATAAATAAAGAT+GGG | + | chr1.2:6223890-6223909 | None:intergenic | 5.0% |
| !!! | TTATATATTTTTTTATTTAC+TGG | - | chr1.2:6223898-6223917 | MS.gene24559:intron | 5.0% |
| !!! | TTTAACAATTTTTTTTTAAA+TGG | + | chr1.2:6224527-6224546 | None:intergenic | 5.0% |
| AAAACGAGCACCACAAGTGG+TGG | - | chr1.2:6221914-6221933 | MS.gene24559:CDS | 50.0% | |
| AAAGGTCCGGTAGCATGACA+CGG | + | chr1.2:6223610-6223629 | None:intergenic | 50.0% | |
| ACCATGAACAATCCTAGGCG+AGG | + | chr1.2:6223777-6223796 | None:intergenic | 50.0% | |
| ATCTAGAGGTAACACGGCGA+TGG | - | chr1.2:6221890-6221909 | MS.gene24559:CDS | 50.0% | |
| CCACTCAGTGGGATAAAGCT+TGG | - | chr1.2:6220548-6220567 | MS.gene24559:intron | 50.0% | |
| GAACATGAAGGTCTTGGAGG+TGG | + | chr1.2:6221777-6221796 | None:intergenic | 50.0% | |
| GCAAAACTCATAGGAGGTGG+TGG | + | chr1.2:6221870-6221889 | None:intergenic | 50.0% | |
| GGCTACACCTCGGAATTGTT+TGG | + | chr1.2:6220524-6220543 | None:intergenic | 50.0% | |
| GGTAAAACGAGCACCACAAG+TGG | - | chr1.2:6221911-6221930 | MS.gene24559:CDS | 50.0% | |
| GTTGCATTGAGTAGGAGCTG+TGG | - | chr1.2:6219696-6219715 | MS.gene24559:intron | 50.0% | |
| TAGCCTGGGATCATCCTTGT+AGG | + | chr1.2:6222723-6222742 | None:intergenic | 50.0% | |
| TCACAACCGTGTCATGCTAC+CGG | - | chr1.2:6223601-6223620 | MS.gene24559:intron | 50.0% | |
| TCATCAGTGAATCCCTCGTG+CGG | + | chr1.2:6222899-6222918 | None:intergenic | 50.0% | |
| TGCTTCCCTCTGCGCTATAT+TGG | - | chr1.2:6223971-6223990 | MS.gene24559:intron | 50.0% | |
| TGGTACAGTTCCACCACTTG+TGG | + | chr1.2:6221927-6221946 | None:intergenic | 50.0% | |
| TTATACGCTTCTCCGCACGA+GGG | - | chr1.2:6222884-6222903 | MS.gene24559:CDS | 50.0% | |
| TTTATACGCTTCTCCGCACG+AGG | - | chr1.2:6222883-6222902 | MS.gene24559:CDS | 50.0% | |
| TTTATCCCACTGAGTGGGGT+CGG | + | chr1.2:6220545-6220564 | None:intergenic | 50.0% | |
| ! | AAACTCATAGGAGGTGGTGG+CGG | + | chr1.2:6221867-6221886 | None:intergenic | 50.0% |
| ! | AAATAAAGATGGGGTGGCGG+TGG | + | chr1.2:6223880-6223899 | None:intergenic | 50.0% |
| ! | CCAAGCTTTATCCCACTGAG+TGG | + | chr1.2:6220551-6220570 | None:intergenic | 50.0% |
| ! | GAAGGTCTTGGAGGTGGATT+AGG | + | chr1.2:6221771-6221790 | None:intergenic | 50.0% |
| ! | TCTTTTCACTGGCGGAACTG+GGG | - | chr1.2:6223839-6223858 | MS.gene24559:intron | 50.0% |
| !! | CTTTGGAGAAGAGGGCGTTA+AGG | - | chr1.2:6221742-6221761 | MS.gene24559:intron | 50.0% |
| AAGCCTGAGCAGTGATGCCT+CGG | + | chr1.2:6221217-6221236 | None:intergenic | 55.0% | |
| CCTCCTACAAGGATGATCCC+AGG | - | chr1.2:6222717-6222736 | MS.gene24559:CDS | 55.0% | |
| CCTGGGATCATCCTTGTAGG+AGG | + | chr1.2:6222720-6222739 | None:intergenic | 55.0% | |
| GCCTCGCCTAGGATTGTTCA+TGG | - | chr1.2:6223773-6223792 | MS.gene24559:intron | 55.0% | |
| ! | ACAAGGGTTTTGCCTCGCCT+AGG | - | chr1.2:6223762-6223781 | MS.gene24559:intron | 55.0% |
| ! | CTTTTCACTGGCGGAACTGG+GGG | - | chr1.2:6223840-6223859 | MS.gene24559:intron | 55.0% |
| ! | TTTTCACTGGCGGAACTGGG+GGG | - | chr1.2:6223841-6223860 | MS.gene24559:intron | 55.0% |
| TGTAGCCGACCCCACTCAGT+GGG | - | chr1.2:6220537-6220556 | MS.gene24559:intron | 60.0% | |
| ! | AAGCCGAGGCATCACTGCTC+AGG | - | chr1.2:6221211-6221230 | MS.gene24559:intron | 60.0% |
| GAGTGGGGTCGGCTACACCT+CGG | + | chr1.2:6220534-6220553 | None:intergenic | 65.0% | |
| GTGTAGCCGACCCCACTCAG+TGG | - | chr1.2:6220536-6220555 | MS.gene24559:intron | 65.0% | |
| !! | ATAGGAGGTGGTGGCGGAGG+TGG | + | chr1.2:6221861-6221880 | None:intergenic | 65.0% |
| !! | CTCATAGGAGGTGGTGGCGG+AGG | + | chr1.2:6221864-6221883 | None:intergenic | 65.0% |
| CGGAACTGGGGGGTGGCAAG+GGG | - | chr1.2:6223851-6223870 | MS.gene24559:intron | 70.0% | |
| GCGGAACTGGGGGGTGGCAA+GGG | - | chr1.2:6223850-6223869 | MS.gene24559:intron | 70.0% | |
| GGAACTGGGGGGTGGCAAGG+GGG | - | chr1.2:6223852-6223871 | MS.gene24559:intron | 70.0% | |
| TCACTGGCGGAACTGGGGGG+TGG | - | chr1.2:6223844-6223863 | MS.gene24559:intron | 70.0% | |
| GGCGGAACTGGGGGGTGGCA+AGG | - | chr1.2:6223849-6223868 | MS.gene24559:intron | 75.0% | |
| GGCGGAGGTGGAGGTGGAGG+AGG | + | chr1.2:6221849-6221868 | None:intergenic | 75.0% | |
| !! | GGAGGTGGTGGCGGAGGTGG+AGG | + | chr1.2:6221858-6221877 | None:intergenic | 75.0% |
| !! | GGTGGCGGAGGTGGAGGTGG+AGG | + | chr1.2:6221852-6221871 | None:intergenic | 75.0% |
| !! | GGTGGTGGCGGAGGTGGAGG+TGG | + | chr1.2:6221855-6221874 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 6219453 | 6224838 | 6219453 | ID=MS.gene24559 |
| chr1.2 | mRNA | 6219453 | 6224838 | 6219453 | ID=MS.gene24559.t1;Parent=MS.gene24559 |
| chr1.2 | exon | 6224407 | 6224838 | 6224407 | ID=MS.gene24559.t1.exon1;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6224407 | 6224838 | 6224407 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| chr1.2 | exon | 6222218 | 6223102 | 6222218 | ID=MS.gene24559.t1.exon2;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6222218 | 6223102 | 6222218 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| chr1.2 | exon | 6221874 | 6222005 | 6221874 | ID=MS.gene24559.t1.exon3;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6221874 | 6222005 | 6221874 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| chr1.2 | exon | 6221505 | 6221686 | 6221505 | ID=MS.gene24559.t1.exon4;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6221505 | 6221686 | 6221505 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| chr1.2 | exon | 6221311 | 6221422 | 6221311 | ID=MS.gene24559.t1.exon5;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6221311 | 6221422 | 6221311 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| chr1.2 | exon | 6220823 | 6220966 | 6220823 | ID=MS.gene24559.t1.exon6;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6220823 | 6220966 | 6220823 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| chr1.2 | exon | 6219453 | 6219533 | 6219453 | ID=MS.gene24559.t1.exon7;Parent=MS.gene24559.t1 |
| chr1.2 | CDS | 6219453 | 6219533 | 6219453 | ID=cds.MS.gene24559.t1;Parent=MS.gene24559.t1 |
| Gene Sequence |
| Protein sequence |
