AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24744

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24744.t1 MTR_3g076930 99.346 459 3 0 55 513 3 461 0.0 943
MS.gene24744.t1 MTR_7g088850 31.892 185 101 6 226 408 305 466 3.46e-19 91.3
MS.gene24744.t1 MTR_7g088830 32.673 202 111 6 212 408 660 841 1.59e-17 86.7
MS.gene24744.t1 MTR_2g086160 34.356 163 88 5 247 408 168 312 3.00e-17 83.6
MS.gene24744.t1 MTR_4g053350 33.520 179 100 6 247 424 163 323 4.29e-17 84.0
MS.gene24744.t1 MTR_2g086160 34.356 163 88 5 247 408 168 312 4.61e-17 84.0
MS.gene24744.t1 MTR_4g053350 35.583 163 86 6 247 408 163 307 4.71e-17 84.0
MS.gene24744.t1 MTR_2g095210 28.431 204 128 5 212 413 408 595 3.94e-16 82.0
MS.gene24744.t1 MTR_7g101870 28.780 205 126 6 212 413 481 668 2.47e-15 79.3
MS.gene24744.t1 MTR_1g063380 29.268 205 125 6 212 413 480 667 7.51e-15 78.2
MS.gene24744.t1 MTR_2g095320 27.723 202 119 5 212 413 423 597 1.03e-14 77.4
MS.gene24744.t1 MTR_7g089040 31.707 205 107 7 212 407 687 867 1.16e-14 77.4
MS.gene24744.t1 MTR_7g088980 33.951 162 90 4 249 408 174 320 2.61e-14 75.1
MS.gene24744.t1 MTR_4g096870 31.401 207 115 8 212 415 121 303 2.99e-14 75.1
MS.gene24744.t1 MTR_7g088980 33.951 162 90 4 249 408 256 402 3.05e-14 75.5
MS.gene24744.t1 MTR_7g088980 33.951 162 90 4 249 408 350 496 3.50e-14 75.5
MS.gene24744.t1 MTR_7g088980 33.951 162 90 4 249 408 324 470 3.72e-14 75.5
MS.gene24744.t1 MTR_4g011810 28.926 242 132 8 189 408 206 429 2.20e-13 72.8
MS.gene24744.t1 MTR_4g094270 30.000 170 101 4 251 416 196 351 2.62e-13 72.0
MS.gene24744.t1 MTR_6g033740 30.909 165 95 4 249 411 538 685 2.95e-13 72.8
MS.gene24744.t1 MTR_1g101870 32.716 162 88 5 251 409 546 689 1.11e-12 71.2
MS.gene24744.t1 MTR_1g101870 32.716 162 88 5 251 409 598 741 1.15e-12 71.2
MS.gene24744.t1 MTR_8g099065 29.697 165 97 4 249 411 572 719 1.15e-12 71.2
MS.gene24744.t1 MTR_5g009840 30.303 165 96 4 249 411 554 701 2.27e-12 70.1
MS.gene24744.t1 MTR_2g024440 27.108 166 104 3 249 414 343 491 2.71e-12 69.7
MS.gene24744.t1 MTR_2g024440 27.108 166 104 3 249 414 342 490 2.80e-12 69.7
MS.gene24744.t1 MTR_2g024440 27.848 158 97 3 249 406 260 400 3.87e-12 68.9
MS.gene24744.t1 MTR_3g092080 29.940 167 91 5 251 412 125 270 7.56e-12 67.4
MS.gene24744.t1 MTR_3g092080 29.940 167 91 5 251 412 125 270 1.01e-11 67.0
MS.gene24744.t1 MTR_1g099480 30.675 163 94 4 251 411 509 654 4.02e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24744.t1 AT4G24710 75.581 430 104 1 84 513 39 467 0.0 679
MS.gene24744.t1 AT4G24710 75.581 430 104 1 84 513 51 479 0.0 679
MS.gene24744.t1 AT4G24710 81.788 302 54 1 84 385 51 351 1.97e-177 503
MS.gene24744.t1 AT4G24710 81.788 302 54 1 84 385 51 351 1.97e-177 503
MS.gene24744.t1 AT3G53230 28.922 204 127 5 212 413 480 667 5.52e-17 84.7
MS.gene24744.t1 AT2G27600 34.969 163 87 6 247 408 165 309 2.16e-16 82.0
MS.gene24744.t1 AT5G03340 28.431 204 128 5 212 413 479 666 2.83e-15 79.3
MS.gene24744.t1 AT3G56690 30.734 218 124 7 196 408 709 904 7.02e-15 78.2
MS.gene24744.t1 AT3G19740 33.750 160 87 4 251 408 742 884 9.66e-15 77.8
MS.gene24744.t1 AT1G50140 33.125 160 88 4 251 408 730 872 1.51e-14 77.4
MS.gene24744.t1 AT1G50140 33.125 160 88 4 251 408 730 872 1.51e-14 77.4
MS.gene24744.t1 AT1G50140 33.125 160 88 4 251 408 752 894 1.61e-14 77.0
MS.gene24744.t1 AT1G50140 33.125 160 88 4 251 408 752 894 1.61e-14 77.0
MS.gene24744.t1 AT1G50140 33.125 160 88 4 251 408 752 894 1.61e-14 77.0
MS.gene24744.t1 AT5G52882 26.809 235 115 6 249 481 552 731 1.74e-14 77.0
MS.gene24744.t1 AT4G04180 26.522 230 110 7 249 477 362 533 2.57e-14 76.3
MS.gene24744.t1 AT4G04180 26.522 230 110 7 249 477 357 528 2.67e-14 75.9
MS.gene24744.t1 AT5G19990 30.000 170 101 4 251 416 198 353 7.05e-14 73.9
MS.gene24744.t1 AT5G19990 30.000 170 101 4 251 416 198 353 7.05e-14 73.9
MS.gene24744.t1 AT5G20000 30.000 170 101 4 251 416 198 353 7.44e-14 73.9
MS.gene24744.t1 AT5G19990 30.000 170 101 4 251 416 140 295 7.97e-14 73.6
MS.gene24744.t1 AT3G09840 29.143 175 108 3 241 413 507 667 8.62e-14 74.7
MS.gene24744.t1 AT2G03670 29.612 206 114 6 212 408 285 468 1.14e-13 73.9
MS.gene24744.t1 AT2G03670 31.176 170 95 6 245 408 53 206 4.51e-12 68.9
MS.gene24744.t1 AT4G28000 29.697 165 97 4 249 411 553 700 5.89e-13 72.0
MS.gene24744.t1 AT1G64110 29.697 165 97 4 249 411 551 698 6.02e-13 72.0
MS.gene24744.t1 AT4G28000 29.697 165 97 4 249 411 555 702 6.05e-13 72.0
MS.gene24744.t1 AT1G64110 29.697 165 97 4 249 411 554 701 6.25e-13 72.0
MS.gene24744.t1 AT1G64110 29.697 165 97 4 249 411 554 701 6.25e-13 72.0
MS.gene24744.t1 AT1G64110 29.697 165 97 4 249 411 556 703 6.42e-13 72.0
MS.gene24744.t1 AT1G64110 29.697 165 97 4 249 411 556 703 6.42e-13 72.0
MS.gene24744.t1 AT4G28000 29.697 165 97 4 249 411 555 702 7.01e-13 71.6
MS.gene24744.t1 AT2G03670 31.176 170 95 6 245 408 53 206 3.09e-12 68.9
MS.gene24744.t1 AT4G04910 26.455 189 124 5 225 408 227 405 7.57e-12 68.6
MS.gene24744.t1 AT5G53540 29.091 165 95 4 251 412 125 270 1.92e-11 66.2

Find 119 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCATTTCTTGAATCTTT+TGG 0.163133 3.1:-63271289 None:intergenic
CACATTCTTTGTTCAGTAAA+TGG 0.170120 3.1:+63269385 MS.gene24744:CDS
GCCTGTAGTACATGTCTTTC+AGG 0.195452 3.1:+63268073 MS.gene24744:CDS
TTAGACCAGATTCATATATT+AGG 0.259717 3.1:-63268846 None:intergenic
CCGAACCTTCTGATTCTATT+CGG 0.296498 3.1:+63271479 MS.gene24744:CDS
GTGGTTAGAATTATCACATT+TGG 0.315571 3.1:-63271725 None:intergenic
CTTCCTGCAAAAGAATTTGA+TGG 0.316919 3.1:+63268712 MS.gene24744:CDS
TGATGCTTGCGAGTTGCAAC+TGG 0.326910 3.1:-63266932 None:intergenic
CGAACCTTCTGATTCTATTC+GGG 0.329197 3.1:+63271480 MS.gene24744:CDS
GGGAAGCTACGGCGCCGTTT+TGG 0.331773 3.1:-63267007 None:intergenic
TTGATCCATTCCTTGTTTCA+TGG 0.336034 3.1:+63268923 MS.gene24744:CDS
AGAATTTGCGTTTGTGATAC+AGG 0.336533 3.1:+63267516 MS.gene24744:CDS
CATTCCTTGTTTCATGGAAC+CGG 0.365098 3.1:+63268929 MS.gene24744:CDS
AAGAGGAGTTTGAGCTATAA+TGG 0.374339 3.1:+63267441 MS.gene24744:CDS
TGCAGCCTAATATATGAATC+TGG 0.381687 3.1:+63268841 MS.gene24744:intron
TTTCCAAAAGATTCAAGAAA+TGG 0.384973 3.1:+63271286 MS.gene24744:CDS
GCATACCAGCTTCCCACTTT+CGG 0.391492 3.1:-63269412 None:intergenic
AAGCCCGGTATGAAATATTA+AGG 0.392685 3.1:+63272296 MS.gene24744:CDS
GTAGTAGCTTCATGAAAATC+TGG 0.399069 3.1:-63272552 None:intergenic
TCGTCAAGGGGAACGGGAAT+CGG 0.406300 3.1:-63267468 None:intergenic
TTGCACATTATCTGCAAGAA+AGG 0.411537 3.1:-63267493 None:intergenic
TGGAAAATTGATTTGAATGA+GGG 0.413815 3.1:-63266876 None:intergenic
AGTAAATGGTTCTCCGAAAG+TGG 0.417358 3.1:+63269399 MS.gene24744:CDS
GCTAGAAAAGCTGCTTTGTC+TGG 0.421700 3.1:+63271454 MS.gene24744:CDS
TTGATAGGATTGCAATCAAA+AGG 0.427262 3.1:-63272779 None:intergenic
AGTCTTCTAGCTTCAATGAA+TGG 0.432368 3.1:+63268686 MS.gene24744:CDS
ATTGTACATAAGAACTTGAT+AGG 0.435567 3.1:-63272794 None:intergenic
CTTTGACAGCTTAGCGAAGA+AGG 0.439270 3.1:+63268634 MS.gene24744:intron
AAGGGTTCGTCAAGGGGAAC+GGG 0.442722 3.1:-63267474 None:intergenic
TGCTTTACTCTTCACTGAAA+AGG 0.448394 3.1:+63268897 MS.gene24744:CDS
CCGAATAGAATCAGAAGGTT+CGG 0.463353 3.1:-63271479 None:intergenic
GGTAGAGGAAGAAGGCAATC+TGG 0.464540 3.1:+63271307 MS.gene24744:CDS
CAATGCATTATTAACTCAGA+TGG 0.466410 3.1:+63271685 MS.gene24744:CDS
GTGGAAAATTGATTTGAATG+AGG 0.466671 3.1:-63266877 None:intergenic
TCCTCCGGTGGAAGAGGAGG+AGG 0.471701 3.1:-63267056 None:intergenic
GATGTCCGTTCCGCCGTTGA+GGG 0.473816 3.1:+63267224 MS.gene24744:CDS
AAGCTTCGCTTACATTAGTC+AGG 0.474119 3.1:-63272851 None:intergenic
TGCTCCGTCTCCATTGGACT+AGG 0.480792 3.1:-63266969 None:intergenic
GTGCATTCACTTCAACAAGC+TGG 0.486304 3.1:-63269365 None:intergenic
TGCACATTATCTGCAAGAAA+GGG 0.489264 3.1:-63267492 None:intergenic
AATATTAAGGTCTTGTGTGC+AGG 0.492194 3.1:+63272309 MS.gene24744:CDS
CAATGCACCTCGAATTGAAT+CGG 0.492486 3.1:-63269241 None:intergenic
TCCGGTGGAAGAGGAGGAGG+GGG 0.493517 3.1:-63267053 None:intergenic
AAGACCTTAATATTTCATAC+CGG 0.493523 3.1:-63272300 None:intergenic
TCATACCGGGCTTGAAGAGT+TGG 0.496365 3.1:-63272286 None:intergenic
ATCGTGAATTGAAGCTGTGC+TGG 0.497938 3.1:-63267204 None:intergenic
TGTCAATCCGATTCAATTCG+AGG 0.498172 3.1:+63269234 MS.gene24744:CDS
AAAGGGTTCGTCAAGGGGAA+CGG 0.504383 3.1:-63267475 None:intergenic
TGGTGGTAGAGGTGAACGTT+GGG 0.507649 3.1:-63267027 None:intergenic
TACCGGGCTTGAAGAGTTGG+TGG 0.509140 3.1:-63272283 None:intergenic
CGATGTCCGTTCCGCCGTTG+AGG 0.509936 3.1:+63267223 MS.gene24744:CDS
GTGCAGGAACTTATGCGTAC+AGG 0.512151 3.1:+63272325 MS.gene24744:CDS
GTTCTCCGAAAGTGGGAAGC+TGG 0.513645 3.1:+63269407 MS.gene24744:CDS
TGCAAGAAAGGGTTCGTCAA+GGG 0.514065 3.1:-63267481 None:intergenic
AACCCTACGACCGACCAAAA+CGG 0.518371 3.1:+63266993 MS.gene24744:CDS
TGCATTCACTTCAACAAGCT+GGG 0.518386 3.1:-63269364 None:intergenic
ACCTGAAAGACATGTACTAC+AGG 0.522775 3.1:-63268074 None:intergenic
AATTTGATGGCATGTGGGAA+AGG 0.528949 3.1:+63268725 MS.gene24744:CDS
ATCTGTCCACAGGGAATGAG+TGG 0.529805 3.1:+63272707 MS.gene24744:intron
AAAGACGTCTTTCCAGTCCC+AGG 0.535392 3.1:-63269188 None:intergenic
CAAGAAATGGTAGAGGAAGA+AGG 0.537039 3.1:+63271299 MS.gene24744:CDS
ATGGTGGTAGAGGTGAACGT+TGG 0.542015 3.1:-63267028 None:intergenic
CTTCAACAAGCTGGGCCTGT+GGG 0.542287 3.1:-63269356 None:intergenic
AGGTGAACGTTGGGAAGCTA+CGG 0.544888 3.1:-63267018 None:intergenic
GCCCACCAACTCTTCAAGCC+CGG 0.546674 3.1:+63272281 MS.gene24744:CDS
TCCAACATTACTGCTGCTAT+CGG 0.546949 3.1:+63271749 MS.gene24744:CDS
CCCTCCTCCTCTTCCACCGG+AGG 0.551215 3.1:+63267055 MS.gene24744:CDS
TTTCCCACTCAGATTCCCAC+AGG 0.553521 3.1:+63269341 MS.gene24744:intron
ATTCATTGAAGCTAGAAGAC+TGG 0.559709 3.1:-63268684 None:intergenic
ACTTCAACAAGCTGGGCCTG+TGG 0.562535 3.1:-63269357 None:intergenic
TGCAGGAACTTATGCGTACA+GGG 0.563349 3.1:+63272326 MS.gene24744:CDS
ATTACCCCTCAACGGCGGAA+CGG 0.564389 3.1:-63267229 None:intergenic
ACCGATAGCAGCAGTAATGT+TGG 0.565609 3.1:-63271750 None:intergenic
ATGTCCGTTCCGCCGTTGAG+GGG 0.566371 3.1:+63267225 MS.gene24744:CDS
TGGCAGTAGAAGTCAAGTCA+TGG 0.569643 3.1:+63266815 MS.gene24744:CDS
CGGTTCCATGAAACAAGGAA+TGG 0.570883 3.1:-63268928 None:intergenic
CTCCGGTGGAAGAGGAGGAG+GGG 0.573112 3.1:-63267054 None:intergenic
GCTGATATCAAAGCATATGT+TGG 0.577084 3.1:+63272259 MS.gene24744:CDS
AAAGATTCAAGAAATGGTAG+AGG 0.577519 3.1:+63271292 MS.gene24744:CDS
AGCAGCAGTAATGTTGGATG+TGG 0.577677 3.1:-63271744 None:intergenic
CCTCCGGTGGAAGAGGAGGA+GGG 0.577752 3.1:-63267055 None:intergenic
TGTGAGGATATCAGCTCTGA+TGG 0.579798 3.1:+63268661 MS.gene24744:CDS
TTCTCCTAGTCCAATGGAGA+CGG 0.580470 3.1:+63266965 MS.gene24744:CDS
GAGCACTTCTCCTAGTCCAA+TGG 0.582713 3.1:+63266959 MS.gene24744:CDS
GCAAGAAAGGGTTCGTCAAG+GGG 0.584552 3.1:-63267480 None:intergenic
CAAAAGAATTTGATGGCATG+TGG 0.585350 3.1:+63268719 MS.gene24744:CDS
ATGAATCTGGTCTAAAGCAA+AGG 0.586924 3.1:+63268854 MS.gene24744:CDS
AGACCTTAATATTTCATACC+GGG 0.587758 3.1:-63272299 None:intergenic
TTTACCCGAATAGAATCAGA+AGG 0.588127 3.1:-63271484 None:intergenic
GTCCACAGGGAATGAGTGGA+AGG 0.588613 3.1:+63272711 MS.gene24744:intron
AATGATAGATACAGCAAAGA+GGG 0.590323 3.1:+63272814 MS.gene24744:CDS
AAGACGTCTTTCCAGTCCCA+GGG 0.593674 3.1:-63269187 None:intergenic
GGTGGGTCTCTGAGAACGAA+GGG 0.597026 3.1:-63266910 None:intergenic
GGCAGTAGAAGTCAAGTCAT+GGG 0.601027 3.1:+63266816 MS.gene24744:CDS
GTCTAAAGCAAAGGTTGCTG+CGG 0.601511 3.1:+63268863 MS.gene24744:CDS
GAGGATAAAATTCTCGTCCC+TGG 0.601718 3.1:+63267074 MS.gene24744:CDS
CTTGCGAGTTGCAACTGGGT+GGG 0.606075 3.1:-63266927 None:intergenic
GGGTGGGTCTCTGAGAACGA+AGG 0.606592 3.1:-63266911 None:intergenic
TTATCCTCCGGTGGAAGAGG+AGG 0.607446 3.1:-63267059 None:intergenic
CTGCAAGAAAGGGTTCGTCA+AGG 0.618408 3.1:-63267482 None:intergenic
GTAAATGGTTCTCCGAAAGT+GGG 0.626891 3.1:+63269400 MS.gene24744:CDS
CTCACCGGTTCCATGAAACA+AGG 0.629691 3.1:-63268933 None:intergenic
GTGGGTCTCTGAGAACGAAG+GGG 0.639052 3.1:-63266909 None:intergenic
TGAAACTGCAGAGGCATGTG+AGG 0.639294 3.1:+63272602 MS.gene24744:CDS
TGGGTCTCTGAGAACGAAGG+GGG 0.640454 3.1:-63266908 None:intergenic
GATGCTTGCGAGTTGCAACT+GGG 0.642526 3.1:-63266931 None:intergenic
GAAATTAGTTGAAACTGCAG+AGG 0.644635 3.1:+63272593 MS.gene24744:CDS
TAGCGAAGAAGGACCGTGTG+AGG 0.645973 3.1:+63268645 MS.gene24744:CDS
TGAATTGAAGCTGTGCTGGA+AGG 0.649944 3.1:-63267200 None:intergenic
ACCGGGCTTGAAGAGTTGGT+GGG 0.651440 3.1:-63272282 None:intergenic
AAAAGAATTTGATGGCATGT+GGG 0.664280 3.1:+63268720 MS.gene24744:CDS
GCTTGCGAGTTGCAACTGGG+TGG 0.668100 3.1:-63266928 None:intergenic
AGGAGTTTGAGCTATAATGG+TGG 0.669249 3.1:+63267444 MS.gene24744:CDS
CAATGATAGATACAGCAAAG+AGG 0.670119 3.1:+63272813 MS.gene24744:CDS
GATAGATTATTACCCCTCAA+CGG 0.678759 3.1:-63267237 None:intergenic
AGACGTCTTTCCAGTCCCAG+GGG 0.712576 3.1:-63269186 None:intergenic
GACGTCTTTCCAGTCCCAGG+GGG 0.718244 3.1:-63269185 None:intergenic
AGATTATTACCCCTCAACGG+CGG 0.725535 3.1:-63267234 None:intergenic
TCAGAGCTGATATCCTCACA+CGG 0.742150 3.1:-63268658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTATTTTTAAAAA+GGG + chr3.1:63270550-63270569 MS.gene24744:intron 0.0%
!!! TATATTTTTTATTTTTAAAA+AGG + chr3.1:63270549-63270568 MS.gene24744:intron 0.0%
!! AACTATCAATATAATATTTA+TGG - chr3.1:63271845-63271864 None:intergenic 10.0%
!! ACTATCAATATAATATTTAT+GGG - chr3.1:63271844-63271863 None:intergenic 10.0%
!! TAATAATAAGATGTAATAAA+TGG - chr3.1:63270141-63270160 None:intergenic 10.0%
!! TTAATAATCTAATCTTTATT+TGG + chr3.1:63272419-63272438 MS.gene24744:intron 10.0%
!!! ACTAATTTTAATTATTCTAT+CGG + chr3.1:63267361-63267380 MS.gene24744:intron 10.0%
!!! AGTAACTTTTTATTTTTTAT+AGG + chr3.1:63268005-63268024 MS.gene24744:intron 10.0%
!!! ATATGTATTTATTTTTGTAT+TGG + chr3.1:63268964-63268983 MS.gene24744:intron 10.0%
!! AAATATTAAGATATGTTCAT+AGG - chr3.1:63269123-63269142 None:intergenic 15.0%
!! GTTTCAAATGAAAATATATT+GGG - chr3.1:63272170-63272189 None:intergenic 15.0%
!! TGTATTAAAAAGCAAAAAAA+TGG + chr3.1:63270063-63270082 MS.gene24744:intron 15.0%
!! TTTCAAATGAAAATATATTG+GGG - chr3.1:63272169-63272188 None:intergenic 15.0%
!!! AAAAAAAAAAGTATACCAAA+TGG + chr3.1:63270874-63270893 MS.gene24744:intron 15.0%
!!! AATTTTTATCCATCATATAA+AGG - chr3.1:63269815-63269834 None:intergenic 15.0%
!!! ATTTTAGTTTGTTAATCTAA+TGG + chr3.1:63272450-63272469 MS.gene24744:intron 15.0%
!!! CTAATTTTAATTATTCTATC+GGG + chr3.1:63267362-63267381 MS.gene24744:intron 15.0%
!!! GAACATATCTTAATATTTTT+AGG + chr3.1:63269125-63269144 MS.gene24744:intron 15.0%
!!! TTATTTTGTTATAGTTTCTA+GGG + chr3.1:63267271-63267290 MS.gene24744:intron 15.0%
!!! TTTATTTTCAATTGTTTGTA+TGG + chr3.1:63267553-63267572 MS.gene24744:intron 15.0%
!!! TTTATTTTGTTATAGTTTCT+AGG + chr3.1:63267270-63267289 MS.gene24744:intron 15.0%
!!! TTTTATTTTTTATAGGTGAA+GGG + chr3.1:63268012-63268031 MS.gene24744:intron 15.0%
!!! TTTTTATTTTTTATAGGTGA+AGG + chr3.1:63268011-63268030 MS.gene24744:intron 15.0%
!! AGCTTCAATGTTTATTATAT+TGG + chr3.1:63269516-63269535 MS.gene24744:intron 20.0%
!! ATATATTCAATGAGCATATA+TGG + chr3.1:63268185-63268204 MS.gene24744:intron 20.0%
!! ATTACATCTTATTATTAGTC+TGG + chr3.1:63270144-63270163 MS.gene24744:intron 20.0%
!! ATTGAAAACAAGTAAATGAA+GGG + chr3.1:63269296-63269315 MS.gene24744:intron 20.0%
!! CGTTTCAAATGAAAATATAT+TGG - chr3.1:63272171-63272190 None:intergenic 20.0%
!! GTAAATTACATGTATCATTT+AGG + chr3.1:63271019-63271038 MS.gene24744:intron 20.0%
!! TAAATGACCGTAAAAAAAAT+GGG + chr3.1:63271948-63271967 MS.gene24744:intron 20.0%
!! TATAAGAGAAACTATTAAGA+AGG - chr3.1:63270426-63270445 None:intergenic 20.0%
!! TGAATTTATGATAATTCAAC+TGG + chr3.1:63267400-63267419 MS.gene24744:intron 20.0%
!! TTAAATGACCGTAAAAAAAA+TGG + chr3.1:63271947-63271966 MS.gene24744:intron 20.0%
!! TTCTATCATAAACCATATTT+CGG + chr3.1:63270378-63270397 MS.gene24744:intron 20.0%
!!! ATAGAAATTGATTTTCTTTG+TGG + chr3.1:63267297-63267316 MS.gene24744:intron 20.0%
!!! TCACTTTAAACGATTTTTTT+TGG + chr3.1:63267790-63267809 MS.gene24744:intron 20.0%
!!! TGATTTTATTGCTATCATTA+TGG + chr3.1:63267587-63267606 MS.gene24744:intron 20.0%
!!! TTTGTGTTTTTAAATCCAAA+AGG + chr3.1:63268223-63268242 MS.gene24744:intron 20.0%
!!! TTTTGGATTTAAAAACACAA+AGG - chr3.1:63268224-63268243 None:intergenic 20.0%
! AAATATTATCCAGGGAAAAA+TGG - chr3.1:63270946-63270965 None:intergenic 25.0%
! AACATGCATATAGTAAACAA+AGG + chr3.1:63268452-63268471 MS.gene24744:intron 25.0%
! AAGACCTTAATATTTCATAC+CGG - chr3.1:63272303-63272322 None:intergenic 25.0%
! AATCACTAAATCCTCATTAA+GGG - chr3.1:63271929-63271948 None:intergenic 25.0%
! AATTACATGTATCATTTAGG+TGG + chr3.1:63271022-63271041 MS.gene24744:intron 25.0%
! AATTGGAATCTATAGAATAG+AGG - chr3.1:63267127-63267146 None:intergenic 25.0%
! ACAGAGATTAATAAGTCAAT+TGG + chr3.1:63271155-63271174 MS.gene24744:intron 25.0%
! ACGAAAATTAGTTGAGAAAT+TGG - chr3.1:63267144-63267163 None:intergenic 25.0%
! ACTACCATACTAACAATAAA+TGG + chr3.1:63270472-63270491 MS.gene24744:intron 25.0%
! AGAAGTAATGACTTCTTTAT+GGG + chr3.1:63271615-63271634 MS.gene24744:intron 25.0%
! ATATGATTATGGTAGTACAT+AGG - chr3.1:63270290-63270309 None:intergenic 25.0%
! ATATTAGTCAAGCAAAGATA+TGG - chr3.1:63268169-63268188 None:intergenic 25.0%
! ATCAAGAAAACTATAGTTGA+GGG - chr3.1:63268779-63268798 None:intergenic 25.0%
! ATGAACAGAAAATATTATCC+AGG - chr3.1:63270955-63270974 None:intergenic 25.0%
! ATGACAGAAACTTAAAGTAA+AGG - chr3.1:63269445-63269464 None:intergenic 25.0%
! ATGTGCTTTATGTTAAAGTA+AGG - chr3.1:63272069-63272088 None:intergenic 25.0%
! ATTACATGTATCATTTAGGT+GGG + chr3.1:63271023-63271042 MS.gene24744:intron 25.0%
! ATTGTACATAAGAACTTGAT+AGG - chr3.1:63272797-63272816 None:intergenic 25.0%
! CAATCTGAATATTCAATTTC+AGG + chr3.1:63271658-63271677 MS.gene24744:intron 25.0%
! CATTGAAAACAAGTAAATGA+AGG + chr3.1:63269295-63269314 MS.gene24744:intron 25.0%
! GAATACATGTGATTAAACAT+AGG - chr3.1:63270843-63270862 None:intergenic 25.0%
! TAATAAACATTGAAGCTAGT+AGG - chr3.1:63269513-63269532 None:intergenic 25.0%
! TAATCACTAAATCCTCATTA+AGG - chr3.1:63271930-63271949 None:intergenic 25.0%
! TAGCAATTAGTATGTCAATA+TGG + chr3.1:63267890-63267909 MS.gene24744:intron 25.0%
! TATCAAGAAAACTATAGTTG+AGG - chr3.1:63268780-63268799 None:intergenic 25.0%
! TGAACAGAAAATATTATCCA+GGG - chr3.1:63270954-63270973 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr3.1:63270373-63270392 None:intergenic 25.0%
! TTAGACCAGATTCATATATT+AGG - chr3.1:63268849-63268868 None:intergenic 25.0%
! TTCATAGTTAATATGCTTCA+TGG - chr3.1:63270743-63270762 None:intergenic 25.0%
! TTCTCAATTTCACAACAAAA+GGG - chr3.1:63267747-63267766 None:intergenic 25.0%
! TTCTTGTATAACGAAATAAG+TGG + chr3.1:63270640-63270659 MS.gene24744:intron 25.0%
! TTTCCAAAAGATTCAAGAAA+TGG + chr3.1:63271286-63271305 MS.gene24744:CDS 25.0%
!! AGGGATATTAACTAATTTTG+AGG + chr3.1:63272345-63272364 MS.gene24744:CDS 25.0%
!! ATAAAAGCGTGAATTACAAA+AGG - chr3.1:63269488-63269507 None:intergenic 25.0%
!! ATTTTCAATTGTTTGTATGG+TGG + chr3.1:63267556-63267575 MS.gene24744:intron 25.0%
!! GATCATGAAGAAACTATTTT+AGG - chr3.1:63272141-63272160 None:intergenic 25.0%
!! GTTGTTGTTCTATATGATTA+TGG - chr3.1:63270301-63270320 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG + chr3.1:63270434-63270453 MS.gene24744:intron 25.0%
!! TATCATTTGACTATCTGTTT+TGG + chr3.1:63271112-63271131 MS.gene24744:intron 25.0%
!! TTCATTTTCGAAAAAGATTC+CGG - chr3.1:63272394-63272413 None:intergenic 25.0%
!!! AAACTATTTTAGGAAGACAT+TGG - chr3.1:63272131-63272150 None:intergenic 25.0%
!!! AATCTGGTATTTGTTTTGAT+CGG + chr3.1:63271323-63271342 MS.gene24744:CDS 25.0%
!!! ACTATCTGTTTTGGAATTTA+AGG + chr3.1:63271121-63271140 MS.gene24744:intron 25.0%
!!! ATTTTCTTTTTCATCCTGTA+TGG - chr3.1:63270526-63270545 None:intergenic 25.0%
!!! CTTTTGTTACTTTCTCTTTT+CGG - chr3.1:63268419-63268438 None:intergenic 25.0%
!!! GAATCTTTTTCGAAAATGAA+AGG + chr3.1:63272394-63272413 MS.gene24744:intron 25.0%
!!! GAGTAATTTTGACTAAATGT+GGG + chr3.1:63267812-63267831 MS.gene24744:intron 25.0%
!!! GATAATTCAACTGGTTTTTT+AGG + chr3.1:63267409-63267428 MS.gene24744:intron 25.0%
!!! TGAGGGTTTTCTTTTAATTT+CGG - chr3.1:63266862-63266881 None:intergenic 25.0%
!!! TGGAAAATTGATTTGAATGA+GGG - chr3.1:63266879-63266898 None:intergenic 25.0%
!!! TTTGATTTTACGTTTACTCA+CGG + chr3.1:63267703-63267722 MS.gene24744:intron 25.0%
!!! TTTTCTTTTTCATCCTGTAT+GGG - chr3.1:63270525-63270544 None:intergenic 25.0%
AAAAGGTGATAAGCTTCAAT+CGG + chr3.1:63268240-63268259 MS.gene24744:intron 30.0%
AAACACAAAGGAAAAACCAT+AGG - chr3.1:63268212-63268231 None:intergenic 30.0%
AAAGATTCAAGAAATGGTAG+AGG + chr3.1:63271292-63271311 MS.gene24744:CDS 30.0%
AAATTCTAACTACCAAACAG+TGG - chr3.1:63269668-63269687 None:intergenic 30.0%
AATGATAGATACAGCAAAGA+GGG + chr3.1:63272814-63272833 MS.gene24744:CDS 30.0%
AATTCTAACTACCAAACAGT+GGG - chr3.1:63269667-63269686 None:intergenic 30.0%
ACACAACAAAACTACAACTT+TGG - chr3.1:63271222-63271241 None:intergenic 30.0%
ACATCATAAGACAGTCTTAA+TGG - chr3.1:63267682-63267701 None:intergenic 30.0%
ACTAAGCAAAGTACAATTAG+AGG - chr3.1:63268554-63268573 None:intergenic 30.0%
AGACCTTAATATTTCATACC+GGG - chr3.1:63272302-63272321 None:intergenic 30.0%
AGTATGTCAATATGGAAGAT+AGG + chr3.1:63267898-63267917 MS.gene24744:intron 30.0%
AGTTGTGATCACAACATATA+AGG - chr3.1:63268990-63269009 None:intergenic 30.0%
ATCTCTTTGTTCTGTTAATG+TGG + chr3.1:63268579-63268598 MS.gene24744:intron 30.0%
ATGAAAATATATTGGGGAAG+TGG - chr3.1:63272163-63272182 None:intergenic 30.0%
ATGGGTGTCTGTAATAATAT+GGG + chr3.1:63271633-63271652 MS.gene24744:intron 30.0%
ATGTTTGCAGTATCCATAAT+AGG - chr3.1:63270909-63270928 None:intergenic 30.0%
CAAAACACTTTATCAATGCA+CGG - chr3.1:63269947-63269966 None:intergenic 30.0%
CAATGCATTATTAACTCAGA+TGG + chr3.1:63271685-63271704 MS.gene24744:CDS 30.0%
CACATTCTTTGTTCAGTAAA+TGG + chr3.1:63269385-63269404 MS.gene24744:CDS 30.0%
CAGAAGTAATGACTTCTTTA+TGG + chr3.1:63271614-63271633 MS.gene24744:intron 30.0%
CAGCAGTTATTGAGAAATAA+AGG - chr3.1:63272681-63272700 None:intergenic 30.0%
CCATCATATAAAGGTAGAAT+GGG - chr3.1:63269806-63269825 None:intergenic 30.0%
CTAAGCAAAGTACAATTAGA+GGG - chr3.1:63268553-63268572 None:intergenic 30.0%
CTTCTCAATTTCACAACAAA+AGG - chr3.1:63267748-63267767 None:intergenic 30.0%
CTTTAACTATTAGCTAGCAT+TGG + chr3.1:63269763-63269782 MS.gene24744:intron 30.0%
GAAGCATATTAACTATGAAG+AGG + chr3.1:63270744-63270763 MS.gene24744:intron 30.0%
GAATGATGAGAAAGTGATAT+AGG - chr3.1:63271779-63271798 None:intergenic 30.0%
GGAAAAAAAGATAACACTTG+TGG + chr3.1:63272627-63272646 MS.gene24744:intron 30.0%
GTATCCATAATAGGATTATG+TGG - chr3.1:63270900-63270919 None:intergenic 30.0%
GTCTTAATGGAACTTTAGAT+TGG - chr3.1:63267669-63267688 None:intergenic 30.0%
GTGGTTAGAATTATCACATT+TGG - chr3.1:63271728-63271747 None:intergenic 30.0%
GTTTATTATATTGGTGAGCT+TGG + chr3.1:63269525-63269544 MS.gene24744:intron 30.0%
TAATGGGGGAAGTTTATTAT+GGG - chr3.1:63268320-63268339 None:intergenic 30.0%
TAGACTGATGTATAATGACA+AGG - chr3.1:63271876-63271895 None:intergenic 30.0%
TATGGGTGTCTGTAATAATA+TGG + chr3.1:63271632-63271651 MS.gene24744:intron 30.0%
TATTGTTAGTATGGTAGTAG+AGG - chr3.1:63270470-63270489 None:intergenic 30.0%
TCCATCATATAAAGGTAGAA+TGG - chr3.1:63269807-63269826 None:intergenic 30.0%
TCTTAGAGGATTATTATGCT+GGG + chr3.1:63269860-63269879 MS.gene24744:intron 30.0%
TCTTTAACCTCACAATCTTT+AGG + chr3.1:63272651-63272670 MS.gene24744:intron 30.0%
TGATCAGTCTATATTGTCTA+GGG - chr3.1:63267959-63267978 None:intergenic 30.0%
TGTGTCTTCAAACATAAAGT+TGG - chr3.1:63269839-63269858 None:intergenic 30.0%
TTATTGCTATCATTATGGAG+TGG + chr3.1:63267592-63267611 MS.gene24744:intron 30.0%
TTCAGGAAAAATAGGTTCAT+CGG + chr3.1:63269985-63270004 MS.gene24744:intron 30.0%
TTCATTGTGATTGGTACTTT+CGG + chr3.1:63270097-63270116 MS.gene24744:intron 30.0%
TTCTTAGAGGATTATTATGC+TGG + chr3.1:63269859-63269878 MS.gene24744:intron 30.0%
TTGATAGGATTGCAATCAAA+AGG - chr3.1:63272782-63272801 None:intergenic 30.0%
TTGATATCAAGCTTGATCAA+AGG + chr3.1:63269613-63269632 MS.gene24744:intron 30.0%
TTGATCAGTCTATATTGTCT+AGG - chr3.1:63267960-63267979 None:intergenic 30.0%
! AAAACCTTTTTCCACTAGTT+AGG + chr3.1:63272096-63272115 MS.gene24744:intron 30.0%
! AAAAGAATTTGATGGCATGT+GGG + chr3.1:63268720-63268739 MS.gene24744:CDS 30.0%
! AACAGGATTTTCATATCTTC+TGG - chr3.1:63269694-63269713 None:intergenic 30.0%
! ACTGCCATTTATTGTTAGTA+TGG - chr3.1:63270479-63270498 None:intergenic 30.0%
! ATATCAATTTGAAGCGACAA+GGG - chr3.1:63269600-63269619 None:intergenic 30.0%
! ATCGCATTTTCAAAAAATCG+TGG - chr3.1:63271554-63271573 None:intergenic 30.0%
! CAAATGTGTATGCTTTTGTA+TGG - chr3.1:63270025-63270044 None:intergenic 30.0%
! CATTTTGCTTATTATAGTCG+AGG + chr3.1:63267166-63267185 MS.gene24744:intron 30.0%
! CTACCATTTCTTGAATCTTT+TGG - chr3.1:63271292-63271311 None:intergenic 30.0%
! GTAGAGATACGATATTTTTC+AGG - chr3.1:63269033-63269052 None:intergenic 30.0%
! TCATTTTCGAAAAAGATTCC+GGG - chr3.1:63272393-63272412 None:intergenic 30.0%
! TCGCATTTTCAAAAAATCGT+GGG - chr3.1:63271553-63271572 None:intergenic 30.0%
! TGTTTTGCACTAGCATAATT+TGG - chr3.1:63272519-63272538 None:intergenic 30.0%
!! ATGATAACGTTCTTTTGTTC+TGG + chr3.1:63268042-63268061 MS.gene24744:CDS 30.0%
!! GTGGAAAATTGATTTGAATG+AGG - chr3.1:63266880-63266899 None:intergenic 30.0%
!! TATTTTTAAAAAGGGCAACC+AGG + chr3.1:63270558-63270577 MS.gene24744:intron 30.0%
!!! AAAGTGTTTTGATTTCCTGT+GGG + chr3.1:63269956-63269975 MS.gene24744:intron 30.0%
!!! ACTAATTTTGAGGTACAGAT+AGG + chr3.1:63272355-63272374 MS.gene24744:intron 30.0%
!!! ATTATTAGTCTGGTTTTGCA+AGG + chr3.1:63270154-63270173 MS.gene24744:intron 30.0%
!!! GGAGTAATTTTGACTAAATG+TGG + chr3.1:63267811-63267830 MS.gene24744:intron 30.0%
!!! GTGCATTCCCATTTTTTTTA+CGG - chr3.1:63271958-63271977 None:intergenic 30.0%
!!! TAAAGTGTTTTGATTTCCTG+TGG + chr3.1:63269955-63269974 MS.gene24744:intron 30.0%
!!! TTTTTAGGATGCTTGAAAAG+AGG + chr3.1:63267424-63267443 MS.gene24744:intron 30.0%
AACACCATCTTCATTGTGAT+TGG + chr3.1:63270088-63270107 MS.gene24744:intron 35.0%
AAGAGGAGTTTGAGCTATAA+TGG + chr3.1:63267441-63267460 MS.gene24744:CDS 35.0%
AAGCAAAGATATGGCAACTT+AGG - chr3.1:63268160-63268179 None:intergenic 35.0%
AAGCCCGGTATGAAATATTA+AGG + chr3.1:63272296-63272315 MS.gene24744:CDS 35.0%
AATAGGATTATGTGGCCATT+TGG - chr3.1:63270892-63270911 None:intergenic 35.0%
AATGAGCATATATGGTCCTA+TGG + chr3.1:63268193-63268212 MS.gene24744:intron 35.0%
ACACAATAGATTACCCATAC+AGG + chr3.1:63270509-63270528 MS.gene24744:intron 35.0%
AGAACAGCAGATAACTTACA+AGG - chr3.1:63271819-63271838 None:intergenic 35.0%
AGAATTTGCGTTTGTGATAC+AGG + chr3.1:63267516-63267535 MS.gene24744:CDS 35.0%
AGTACCAATCACAATGAAGA+TGG - chr3.1:63270095-63270114 None:intergenic 35.0%
ATATTAGGCTGCAAAAGCAA+TGG - chr3.1:63268834-63268853 None:intergenic 35.0%
ATCAAGCTTGATCAAAGGAT+TGG + chr3.1:63269618-63269637 MS.gene24744:intron 35.0%
ATGGCCACATAATCCTATTA+TGG + chr3.1:63270893-63270912 MS.gene24744:intron 35.0%
ATTCATTGAAGCTAGAAGAC+TGG - chr3.1:63268687-63268706 None:intergenic 35.0%
CAATCAGTTTCACGTTATGT+GGG + chr3.1:63269548-63269567 MS.gene24744:intron 35.0%
CAATGATAGATACAGCAAAG+AGG + chr3.1:63272813-63272832 MS.gene24744:CDS 35.0%
CAGGATAAAGATGGCAAAAA+AGG - chr3.1:63269908-63269927 None:intergenic 35.0%
CCCATTCTACCTTTATATGA+TGG + chr3.1:63269803-63269822 MS.gene24744:intron 35.0%
CGTATAACTCAGACATTGTT+TGG - chr3.1:63267853-63267872 None:intergenic 35.0%
CTTCCTGCAAAAGAATTTGA+TGG + chr3.1:63268712-63268731 MS.gene24744:CDS 35.0%
GAAATTAGTTGAAACTGCAG+AGG + chr3.1:63272593-63272612 MS.gene24744:CDS 35.0%
GAAGATAAGATTAGAGAGAG+TGG - chr3.1:63267105-63267124 None:intergenic 35.0%
GATAGATTATTACCCCTCAA+CGG - chr3.1:63267240-63267259 None:intergenic 35.0%
GCTGATATCAAAGCATATGT+TGG + chr3.1:63272259-63272278 MS.gene24744:CDS 35.0%
GGATTTAGAGATTACTGAGT+TGG - chr3.1:63270405-63270424 None:intergenic 35.0%
GTAGTAGCTTCATGAAAATC+TGG - chr3.1:63272555-63272574 None:intergenic 35.0%
GTTTGAAGACACATTCTTAG+AGG + chr3.1:63269846-63269865 MS.gene24744:intron 35.0%
TGCACATTATCTGCAAGAAA+GGG - chr3.1:63267495-63267514 None:intergenic 35.0%
TGCAGCCTAATATATGAATC+TGG + chr3.1:63268841-63268860 MS.gene24744:intron 35.0%
TGCTTTACTCTTCACTGAAA+AGG + chr3.1:63268897-63268916 MS.gene24744:CDS 35.0%
TGTTATTGTTTGTCTGATGC+TGG - chr3.1:63272027-63272046 None:intergenic 35.0%
TGTTCCTAACTAGTGGAAAA+AGG - chr3.1:63272103-63272122 None:intergenic 35.0%
TTGCACATTATCTGCAAGAA+AGG - chr3.1:63267496-63267515 None:intergenic 35.0%
TTGTTGTGTCAAATGCGTAA+CGG + chr3.1:63271233-63271252 MS.gene24744:intron 35.0%
TTTACCCGAATAGAATCAGA+AGG - chr3.1:63271487-63271506 None:intergenic 35.0%
TTTCGTTATACAAGAATCCC+TGG - chr3.1:63270636-63270655 None:intergenic 35.0%
TTTGACTAAATGTGGGAATC+TGG + chr3.1:63267819-63267838 MS.gene24744:intron 35.0%
! AATATTAAGGTCTTGTGTGC+AGG + chr3.1:63272309-63272328 MS.gene24744:CDS 35.0%
! AATGGATAATCATGCTGACT+TGG + chr3.1:63272468-63272487 MS.gene24744:intron 35.0%
! ATGAATCTGGTCTAAAGCAA+AGG + chr3.1:63268854-63268873 MS.gene24744:CDS 35.0%
! ATGCCATCAAATTCTTTTGC+AGG - chr3.1:63268718-63268737 None:intergenic 35.0%
! ATTTTCAAAAAATCGTGGGG+AGG - chr3.1:63271549-63271568 None:intergenic 35.0%
! CAAAAGAATTTGATGGCATG+TGG + chr3.1:63268719-63268738 MS.gene24744:CDS 35.0%
! CGCATTTTCAAAAAATCGTG+GGG - chr3.1:63271552-63271571 None:intergenic 35.0%
! GATATCAATTTGAAGCGACA+AGG - chr3.1:63269601-63269620 None:intergenic 35.0%
! GATTGAAGCTTATCACCTTT+TGG - chr3.1:63268241-63268260 None:intergenic 35.0%
! GTAATGGGGGAAGTTTATTA+TGG - chr3.1:63268321-63268340 None:intergenic 35.0%
! TCTCAGAAAGCTTCCATTTT+TGG + chr3.1:63272736-63272755 MS.gene24744:CDS 35.0%
! TGCAGCATAATTCTTTTGCA+TGG + chr3.1:63269161-63269180 MS.gene24744:intron 35.0%
! TGCTTATGTGTCGTTGTAAT+GGG - chr3.1:63268336-63268355 None:intergenic 35.0%
! TTGATCCATTCCTTGTTTCA+TGG + chr3.1:63268923-63268942 MS.gene24744:CDS 35.0%
! TTGGATTGACTCAAATAGCT+AGG + chr3.1:63269637-63269656 MS.gene24744:intron 35.0%
! TTTTCAAAAAATCGTGGGGA+GGG - chr3.1:63271548-63271567 None:intergenic 35.0%
! TTTTGCAAGGCATACTGTAT+CGG + chr3.1:63270167-63270186 MS.gene24744:intron 35.0%
!! AGTCTTCTAGCTTCAATGAA+TGG + chr3.1:63268686-63268705 MS.gene24744:CDS 35.0%
!! ATAATCATGCTGACTTGGTT+AGG + chr3.1:63272473-63272492 MS.gene24744:intron 35.0%
!! ATTTTAGGAAGACATTGGAG+TGG - chr3.1:63272126-63272145 None:intergenic 35.0%
!! CTATTAGCTAGCATTGGTTA+AGG + chr3.1:63269769-63269788 MS.gene24744:intron 35.0%
!! TACATATCTCTAGAACTCAC+CGG - chr3.1:63268951-63268970 None:intergenic 35.0%
!!! ATGGGCATAACTTTTGAGTT+TGG + chr3.1:63269726-63269745 MS.gene24744:intron 35.0%
!!! CGGTGTCTCTTTATTTTTCT+AGG + chr3.1:63271253-63271272 MS.gene24744:intron 35.0%
!!! CTTTTTTGCCATCTTTATCC+TGG + chr3.1:63269906-63269925 MS.gene24744:intron 35.0%
!!! GGGTTTTCTTTTAATTTCGG+CGG - chr3.1:63266859-63266878 None:intergenic 35.0%
!!! GTGGTTTTAGTTTTGTGTGA+GGG + chr3.1:63267316-63267335 MS.gene24744:intron 35.0%
!!! TACTGTATCGGTTTTGACAT+TGG + chr3.1:63270179-63270198 MS.gene24744:intron 35.0%
!!! TGGGCATAACTTTTGAGTTT+GGG + chr3.1:63269727-63269746 MS.gene24744:intron 35.0%
!!! TGGTTTTAGTTTTGTGTGAG+GGG + chr3.1:63267317-63267336 MS.gene24744:intron 35.0%
!!! TGTGGTTTTAGTTTTGTGTG+AGG + chr3.1:63267315-63267334 MS.gene24744:intron 35.0%
AAAAGTTATGCCCATACCAC+TGG - chr3.1:63269721-63269740 None:intergenic 40.0%
AAACCCTATCCCACTAAGTT+TGG + chr3.1:63270325-63270344 MS.gene24744:intron 40.0%
AAACTTAGTGGGATAGGGTT+TGG - chr3.1:63270326-63270345 None:intergenic 40.0%
AAAGTTATGCCCATACCACT+GGG - chr3.1:63269720-63269739 None:intergenic 40.0%
AACAATAACATGCCTGGATC+TGG + chr3.1:63272037-63272056 MS.gene24744:intron 40.0%
AAGCAATGGTAAATGGTGCA+AGG - chr3.1:63268820-63268839 None:intergenic 40.0%
ACCTGAAAGACATGTACTAC+AGG - chr3.1:63268077-63268096 None:intergenic 40.0%
AGGAGTTTGAGCTATAATGG+TGG + chr3.1:63267444-63267463 MS.gene24744:CDS 40.0%
AGGTTGACCTAAAGATTGTG+AGG - chr3.1:63272661-63272680 None:intergenic 40.0%
AGTAAATGGTTCTCCGAAAG+TGG + chr3.1:63269399-63269418 MS.gene24744:CDS 40.0%
ATCTCTCATGAGACTGTGTA+TGG - chr3.1:63268293-63268312 None:intergenic 40.0%
CAAGAAATGGTAGAGGAAGA+AGG + chr3.1:63271299-63271318 MS.gene24744:CDS 40.0%
CAATGCACCTCGAATTGAAT+CGG - chr3.1:63269244-63269263 None:intergenic 40.0%
CAGAATCTGTAATCAGCTCA+TGG + chr3.1:63268354-63268373 MS.gene24744:intron 40.0%
CAGACAAACAATAACATGCC+TGG + chr3.1:63272031-63272050 MS.gene24744:intron 40.0%
CATTATGGAGTGGCAAGATA+TGG + chr3.1:63267602-63267621 MS.gene24744:intron 40.0%
CCGAACCTTCTGATTCTATT+CGG + chr3.1:63271479-63271498 MS.gene24744:CDS 40.0%
CCGAATAGAATCAGAAGGTT+CGG - chr3.1:63271482-63271501 None:intergenic 40.0%
CGAACCTTCTGATTCTATTC+GGG + chr3.1:63271480-63271499 MS.gene24744:CDS 40.0%
GAAAATCCTGTTTATCCCAG+TGG + chr3.1:63269702-63269721 MS.gene24744:intron 40.0%
GCAATCAGTTTCACGTTATG+TGG + chr3.1:63269547-63269566 MS.gene24744:intron 40.0%
GCTGCAAAAGCAATGGTAAA+TGG - chr3.1:63268827-63268846 None:intergenic 40.0%
GGAATCTGAGTGGGAAAAAA+TGG - chr3.1:63269338-63269357 None:intergenic 40.0%
GGGATGATGTTGATGCATAA+TGG - chr3.1:63268533-63268552 None:intergenic 40.0%
GTAAATGGTTCTCCGAAAGT+GGG + chr3.1:63269400-63269419 MS.gene24744:CDS 40.0%
GTAAGGTTAATTCCAGATCC+AGG - chr3.1:63272052-63272071 None:intergenic 40.0%
GTACATAGGTTCAGAGTTTC+AGG - chr3.1:63270276-63270295 None:intergenic 40.0%
GTATCATTTAGGTGGGCATT+TGG + chr3.1:63271030-63271049 MS.gene24744:intron 40.0%
TACCAAGTCCAGGATAAAGA+TGG - chr3.1:63269917-63269936 None:intergenic 40.0%
TAGAGGATTATTATGCTGGG+AGG + chr3.1:63269863-63269882 MS.gene24744:intron 40.0%
TCCAACATTACTGCTGCTAT+CGG + chr3.1:63271749-63271768 MS.gene24744:CDS 40.0%
TCTGAGTGGGAAAAAATGGT+AGG - chr3.1:63269334-63269353 None:intergenic 40.0%
TGATGCTGGATGGTTTCTTA+TGG + chr3.1:63270248-63270267 MS.gene24744:intron 40.0%
TGCATTCACTTCAACAAGCT+GGG - chr3.1:63269367-63269386 None:intergenic 40.0%
TGTAATCAGCTCATGGTAGA+AGG + chr3.1:63268361-63268380 MS.gene24744:intron 40.0%
TGTCAATCCGATTCAATTCG+AGG + chr3.1:63269234-63269253 MS.gene24744:CDS 40.0%
! AATTTGATGGCATGTGGGAA+AGG + chr3.1:63268725-63268744 MS.gene24744:CDS 40.0%
! AGAAACCATTCTAGAAGCTG+TGG - chr3.1:63268394-63268413 None:intergenic 40.0%
! AGATCTAGCTTCCCTTAATG+AGG + chr3.1:63271915-63271934 MS.gene24744:intron 40.0%
! ATGTACCGACCAAACTTAGT+GGG - chr3.1:63270337-63270356 None:intergenic 40.0%
! CATTCCTTGTTTCATGGAAC+CGG + chr3.1:63268929-63268948 MS.gene24744:CDS 40.0%
! CTGCTTATGTGTCGTTGTAA+TGG - chr3.1:63268337-63268356 None:intergenic 40.0%
! CTTATGTGTCGTTGTAATGG+GGG - chr3.1:63268334-63268353 None:intergenic 40.0%
! GAAACCATTCTAGAAGCTGT+GGG - chr3.1:63268393-63268412 None:intergenic 40.0%
! GCTTATGTGTCGTTGTAATG+GGG - chr3.1:63268335-63268354 None:intergenic 40.0%
! TACTGAGTTGGACCGAAATA+TGG - chr3.1:63270393-63270412 None:intergenic 40.0%
!! GGAGGGTATTCAGGAAAAAT+AGG + chr3.1:63269977-63269996 MS.gene24744:intron 40.0%
!! TTTCACAACAAAAGGGCATC+TGG - chr3.1:63267740-63267759 None:intergenic 40.0%
!!! GGTATTTGTTTTGATCGGTG+AGG + chr3.1:63271328-63271347 MS.gene24744:intron 40.0%
!!! GGTTTTAGTTTTGTGTGAGG+GGG + chr3.1:63267318-63267337 MS.gene24744:intron 40.0%
!!! TGTTTTGATTTCCTGTGGGA+GGG + chr3.1:63269960-63269979 MS.gene24744:intron 40.0%
AACCATTGAACCAACCACCA+GGG + chr3.1:63270616-63270635 MS.gene24744:intron 45.0%
AACGAAGGGGGTAAGAAAAG+TGG - chr3.1:63266899-63266918 None:intergenic 45.0%
AAGCAGAAGATGATGCTGGA+TGG + chr3.1:63270238-63270257 MS.gene24744:intron 45.0%
ACAAAACTCCCACCATGACT+AGG + chr3.1:63270585-63270604 MS.gene24744:intron 45.0%
ACCGATAGCAGCAGTAATGT+TGG - chr3.1:63271753-63271772 None:intergenic 45.0%
AGATTATTACCCCTCAACGG+CGG - chr3.1:63267237-63267256 None:intergenic 45.0%
AGCAGCAGTAATGTTGGATG+TGG - chr3.1:63271747-63271766 None:intergenic 45.0%
AGCTAGGAAAACCCACTGTT+TGG + chr3.1:63269653-63269672 MS.gene24744:intron 45.0%
AGGGAGTTTATTCATGCAGG+GGG - chr3.1:63271525-63271544 None:intergenic 45.0%
AGTGCAGCATGTGCCAAAAA+TGG - chr3.1:63272752-63272771 None:intergenic 45.0%
AGTTTCACGTTATGTGGGCT+GGG + chr3.1:63269553-63269572 MS.gene24744:intron 45.0%
ATACAAGAATCCCTGGTGGT+TGG - chr3.1:63270629-63270648 None:intergenic 45.0%
ATCGTGAATTGAAGCTGTGC+TGG - chr3.1:63267207-63267226 None:intergenic 45.0%
CACTAAGTTTGGTCGGTACA+TGG + chr3.1:63270336-63270355 MS.gene24744:intron 45.0%
CCTATCCCACTAAGTTTGGT+CGG + chr3.1:63270329-63270348 MS.gene24744:intron 45.0%
CCTGTTTATCCCAGTGGTAT+GGG + chr3.1:63269708-63269727 MS.gene24744:intron 45.0%
CGACCAAACTTAGTGGGATA+GGG - chr3.1:63270331-63270350 None:intergenic 45.0%
CGGTTCCATGAAACAAGGAA+TGG - chr3.1:63268931-63268950 None:intergenic 45.0%
CGTTATACAAGAATCCCTGG+TGG - chr3.1:63270633-63270652 None:intergenic 45.0%
CTGTGTTTGATCTGTCCACA+GGG + chr3.1:63272698-63272717 MS.gene24744:intron 45.0%
CTTTGACAGCTTAGCGAAGA+AGG + chr3.1:63268634-63268653 MS.gene24744:intron 45.0%
GAAGAGGATGCCACATGTTA+GGG + chr3.1:63270760-63270779 MS.gene24744:intron 45.0%
GAGGATAAAATTCTCGTCCC+TGG + chr3.1:63267074-63267093 MS.gene24744:CDS 45.0%
GAGGGAGTTTATTCATGCAG+GGG - chr3.1:63271526-63271545 None:intergenic 45.0%
GATAGGTCTCAATCTTCTCC+CGG + chr3.1:63272372-63272391 MS.gene24744:intron 45.0%
GCCTGTAGTACATGTCTTTC+AGG + chr3.1:63268073-63268092 MS.gene24744:CDS 45.0%
GCTTAAGCAGAAGATGATGC+TGG + chr3.1:63270234-63270253 MS.gene24744:intron 45.0%
GGAATTGACCTAGTCATGGT+GGG - chr3.1:63270596-63270615 None:intergenic 45.0%
GGAGGGAGTTTATTCATGCA+GGG - chr3.1:63271527-63271546 None:intergenic 45.0%
GGCAGTAGAAGTCAAGTCAT+GGG + chr3.1:63266816-63266835 MS.gene24744:CDS 45.0%
GGTTGGAATTGACCTAGTCA+TGG - chr3.1:63270600-63270619 None:intergenic 45.0%
GTGCATTCACTTCAACAAGC+TGG - chr3.1:63269368-63269387 None:intergenic 45.0%
TAGTATGGTAGTAGAGGCAG+AGG - chr3.1:63270464-63270483 None:intergenic 45.0%
TCAGAGCTGATATCCTCACA+CGG - chr3.1:63268661-63268680 None:intergenic 45.0%
TCCTGTTTATCCCAGTGGTA+TGG + chr3.1:63269707-63269726 MS.gene24744:intron 45.0%
TGAAGAGGATGCCACATGTT+AGG + chr3.1:63270759-63270778 MS.gene24744:intron 45.0%
TGAATTGAAGCTGTGCTGGA+AGG - chr3.1:63267203-63267222 None:intergenic 45.0%
TGCAAGAAAGGGTTCGTCAA+GGG - chr3.1:63267484-63267503 None:intergenic 45.0%
TGCAGGAACTTATGCGTACA+GGG + chr3.1:63272326-63272345 MS.gene24744:CDS 45.0%
TGCCATCTTTATCCTGGACT+TGG + chr3.1:63269912-63269931 MS.gene24744:intron 45.0%
TGGAATTGACCTAGTCATGG+TGG - chr3.1:63270597-63270616 None:intergenic 45.0%
TGGCAGTAGAAGTCAAGTCA+TGG + chr3.1:63266815-63266834 MS.gene24744:CDS 45.0%
TTCTCCTAGTCCAATGGAGA+CGG + chr3.1:63266965-63266984 MS.gene24744:CDS 45.0%
! ACGAGAATTTTATCCTCCGG+TGG - chr3.1:63267071-63267090 None:intergenic 45.0%
! ATTTTATCCTCCGGTGGAAG+AGG - chr3.1:63267065-63267084 None:intergenic 45.0%
! CATGTACCGACCAAACTTAG+TGG - chr3.1:63270338-63270357 None:intergenic 45.0%
! GCTAGAAAAGCTGCTTTGTC+TGG + chr3.1:63271454-63271473 MS.gene24744:CDS 45.0%
! GGGACGAGAATTTTATCCTC+CGG - chr3.1:63267074-63267093 None:intergenic 45.0%
! GTCTAAAGCAAAGGTTGCTG+CGG + chr3.1:63268863-63268882 MS.gene24744:CDS 45.0%
! GTTTTGTGTGAGGGGGTAAT+TGG + chr3.1:63267325-63267344 MS.gene24744:intron 45.0%
! TGTGAGGATATCAGCTCTGA+TGG + chr3.1:63268661-63268680 MS.gene24744:CDS 45.0%
!! TAGAGAGAGTGGAAGTACCA+GGG - chr3.1:63267094-63267113 None:intergenic 45.0%
!! TTAGAGAGAGTGGAAGTACC+AGG - chr3.1:63267095-63267114 None:intergenic 45.0%
!!! GTGTTTTGATTTCCTGTGGG+AGG + chr3.1:63269959-63269978 MS.gene24744:intron 45.0%
!!! TGTAGTCTGCCATTTTTCCC+TGG + chr3.1:63270934-63270953 MS.gene24744:intron 45.0%
AAAGACGTCTTTCCAGTCCC+AGG - chr3.1:63269191-63269210 None:intergenic 50.0%
AAAGGGTTCGTCAAGGGGAA+CGG - chr3.1:63267478-63267497 None:intergenic 50.0%
AACCCTACGACCGACCAAAA+CGG + chr3.1:63266993-63267012 MS.gene24744:CDS 50.0%
AAGACGTCTTTCCAGTCCCA+GGG - chr3.1:63269190-63269209 None:intergenic 50.0%
AGGCTTTCGACTTCATCTGC+AGG - chr3.1:63271427-63271446 None:intergenic 50.0%
AGGTGAACGTTGGGAAGCTA+CGG - chr3.1:63267021-63267040 None:intergenic 50.0%
ATCAACCGTGCCCTAACATG+TGG - chr3.1:63270773-63270792 None:intergenic 50.0%
ATCTGTCCACAGGGAATGAG+TGG + chr3.1:63272707-63272726 MS.gene24744:intron 50.0%
ATGGTGGTAGAGGTGAACGT+TGG - chr3.1:63267031-63267050 None:intergenic 50.0%
CAAAAAATCGTGGGGAGGGA+GGG - chr3.1:63271544-63271563 None:intergenic 50.0%
CAACCATTGAACCAACCACC+AGG + chr3.1:63270615-63270634 MS.gene24744:intron 50.0%
CAGTTTCACGTTATGTGGGC+TGG + chr3.1:63269552-63269571 MS.gene24744:intron 50.0%
CCCATACCACTGGGATAAAC+AGG - chr3.1:63269711-63269730 None:intergenic 50.0%
CCGACCAAACTTAGTGGGAT+AGG - chr3.1:63270332-63270351 None:intergenic 50.0%
CGGACAATACTACCAAGTCC+AGG - chr3.1:63269927-63269946 None:intergenic 50.0%
CTGCAAGAAAGGGTTCGTCA+AGG - chr3.1:63267485-63267504 None:intergenic 50.0%
GAGCACTTCTCCTAGTCCAA+TGG + chr3.1:63266959-63266978 MS.gene24744:CDS 50.0%
GATGCTTGCGAGTTGCAACT+GGG - chr3.1:63266934-63266953 None:intergenic 50.0%
GCAAGAAAGGGTTCGTCAAG+GGG - chr3.1:63267483-63267502 None:intergenic 50.0%
GCATACCAGCTTCCCACTTT+CGG - chr3.1:63269415-63269434 None:intergenic 50.0%
GCTGTGTTTGATCTGTCCAC+AGG + chr3.1:63272697-63272716 MS.gene24744:intron 50.0%
GGAGTGGTGTTCCTAACTAG+TGG - chr3.1:63272110-63272129 None:intergenic 50.0%
GGGAGGGAGTTTATTCATGC+AGG - chr3.1:63271528-63271547 None:intergenic 50.0%
GGTAGAGGAAGAAGGCAATC+TGG + chr3.1:63271307-63271326 MS.gene24744:CDS 50.0%
GTGCAGGAACTTATGCGTAC+AGG + chr3.1:63272325-63272344 MS.gene24744:CDS 50.0%
TCAAAAAATCGTGGGGAGGG+AGG - chr3.1:63271545-63271564 None:intergenic 50.0%
TCATACCGGGCTTGAAGAGT+TGG - chr3.1:63272289-63272308 None:intergenic 50.0%
TGATGCTTGCGAGTTGCAAC+TGG - chr3.1:63266935-63266954 None:intergenic 50.0%
TGGTGGTAGAGGTGAACGTT+GGG - chr3.1:63267030-63267049 None:intergenic 50.0%
TTTCCCACTCAGATTCCCAC+AGG + chr3.1:63269341-63269360 MS.gene24744:intron 50.0%
TTTCCTGAATACCCTCCCAC+AGG - chr3.1:63269974-63269993 None:intergenic 50.0%
! ATCCCTGGTGGTTGGTTCAA+TGG - chr3.1:63270621-63270640 None:intergenic 50.0%
! ATTCTTTTGCATGGACCCCC+TGG + chr3.1:63269170-63269189 MS.gene24744:CDS 50.0%
! CTATCGGGTTCTGTGTTGCT+TGG + chr3.1:63267377-63267396 MS.gene24744:intron 50.0%
! CTGACCCACAGCTTCTAGAA+TGG + chr3.1:63268386-63268405 MS.gene24744:intron 50.0%
! CTGGTGGTTGGTTCAATGGT+TGG - chr3.1:63270617-63270636 None:intergenic 50.0%
! GCTTCAATCGGTTCATCTGC+TGG + chr3.1:63268252-63268271 MS.gene24744:intron 50.0%
! GTTTCACGTTATGTGGGCTG+GGG + chr3.1:63269554-63269573 MS.gene24744:intron 50.0%
! TGAAACTGCAGAGGCATGTG+AGG + chr3.1:63272602-63272621 MS.gene24744:CDS 50.0%
! TTCTTTTGCATGGACCCCCT+GGG + chr3.1:63269171-63269190 MS.gene24744:CDS 50.0%
!! CAGCTTTTCTAGCAGCAGCA+AGG - chr3.1:63271447-63271466 None:intergenic 50.0%
!! CTCACCGGTTCCATGAAACA+AGG - chr3.1:63268936-63268955 None:intergenic 50.0%
!! GGTGGGAGTTTTGTAGAACC+TGG - chr3.1:63270579-63270598 None:intergenic 50.0%
!! TTTCACGTTATGTGGGCTGG+GGG + chr3.1:63269555-63269574 MS.gene24744:intron 50.0%
!! TTTCCTGTGGGAGGGTATTC+AGG + chr3.1:63269968-63269987 MS.gene24744:intron 50.0%
AAGGGTTCGTCAAGGGGAAC+GGG - chr3.1:63267477-63267496 None:intergenic 55.0%
ACTTCAACAAGCTGGGCCTG+TGG - chr3.1:63269360-63269379 None:intergenic 55.0%
AGACGTCTTTCCAGTCCCAG+GGG - chr3.1:63269189-63269208 None:intergenic 55.0%
ATTACCCCTCAACGGCGGAA+CGG - chr3.1:63267232-63267251 None:intergenic 55.0%
CTTCAACAAGCTGGGCCTGT+GGG - chr3.1:63269359-63269378 None:intergenic 55.0%
CTTGCGAGTTGCAACTGGGT+GGG - chr3.1:63266930-63266949 None:intergenic 55.0%
GACCTTCCACTCATTCCCTG+TGG - chr3.1:63272716-63272735 None:intergenic 55.0%
GGATGCCACATGTTAGGGCA+CGG + chr3.1:63270765-63270784 MS.gene24744:intron 55.0%
GTCCACAGGGAATGAGTGGA+AGG + chr3.1:63272711-63272730 MS.gene24744:intron 55.0%
GTTCTCCGAAAGTGGGAAGC+TGG + chr3.1:63269407-63269426 MS.gene24744:CDS 55.0%
TACCGGGCTTGAAGAGTTGG+TGG - chr3.1:63272286-63272305 None:intergenic 55.0%
TAGCGAAGAAGGACCGTGTG+AGG + chr3.1:63268645-63268664 MS.gene24744:CDS 55.0%
TCGTCAAGGGGAACGGGAAT+CGG - chr3.1:63267471-63267490 None:intergenic 55.0%
TGCTCCGTCTCCATTGGACT+AGG - chr3.1:63266972-63266991 None:intergenic 55.0%
TTATCCTCCGGTGGAAGAGG+AGG - chr3.1:63267062-63267081 None:intergenic 55.0%
! ACCGGGCTTGAAGAGTTGGT+GGG - chr3.1:63272285-63272304 None:intergenic 55.0%
! ACTGCAGAGGCATGTGAGGT+AGG + chr3.1:63272606-63272625 MS.gene24744:intron 55.0%
! GGGTTTTGCTCCGTCTCCAT+TGG - chr3.1:63266978-63266997 None:intergenic 55.0%
! GGTGGGTCTCTGAGAACGAA+GGG - chr3.1:63266913-63266932 None:intergenic 55.0%
! GTGGGTCTCTGAGAACGAAG+GGG - chr3.1:63266912-63266931 None:intergenic 55.0%
! TGGGTCTCTGAGAACGAAGG+GGG - chr3.1:63266911-63266930 None:intergenic 55.0%
!! CAAAAGGGCATCTGGACGTG+CGG - chr3.1:63267732-63267751 None:intergenic 55.0%
ATGTCCGTTCCGCCGTTGAG+GGG + chr3.1:63267225-63267244 MS.gene24744:CDS 60.0%
GACGTCTTTCCAGTCCCAGG+GGG - chr3.1:63269188-63269207 None:intergenic 60.0%
GATGTCCGTTCCGCCGTTGA+GGG + chr3.1:63267224-63267243 MS.gene24744:CDS 60.0%
GCCCACCAACTCTTCAAGCC+CGG + chr3.1:63272281-63272300 MS.gene24744:CDS 60.0%
GCTTGCGAGTTGCAACTGGG+TGG - chr3.1:63266931-63266950 None:intergenic 60.0%
GGGCCTGTGGGAATCTGAGT+GGG - chr3.1:63269347-63269366 None:intergenic 60.0%
TGGGCCTGTGGGAATCTGAG+TGG - chr3.1:63269348-63269367 None:intergenic 60.0%
! GGGTGGGTCTCTGAGAACGA+AGG - chr3.1:63266914-63266933 None:intergenic 60.0%
! TTCATGCAGGGGGCGCAGAA+AGG - chr3.1:63271515-63271534 None:intergenic 60.0%
!! AGCTACGGCGCCGTTTTGGT+CGG - chr3.1:63267006-63267025 None:intergenic 60.0%
!! CGCCGTTTTGGTCGGTCGTA+GGG - chr3.1:63266998-63267017 None:intergenic 60.0%
AGAGGAGGAGGGGGAGATGG+TGG - chr3.1:63267047-63267066 None:intergenic 65.0%
CCTCCGGTGGAAGAGGAGGA+GGG - chr3.1:63267058-63267077 None:intergenic 65.0%
CGATGTCCGTTCCGCCGTTG+AGG + chr3.1:63267223-63267242 MS.gene24744:CDS 65.0%
CTCCGGTGGAAGAGGAGGAG+GGG - chr3.1:63267057-63267076 None:intergenic 65.0%
GGAAGAGGAGGAGGGGGAGA+TGG - chr3.1:63267050-63267069 None:intergenic 65.0%
TCCCCCTCCTCCTCTTCCAC+CGG + chr3.1:63267052-63267071 MS.gene24744:CDS 65.0%
TCCGGTGGAAGAGGAGGAGG+GGG - chr3.1:63267056-63267075 None:intergenic 65.0%
TCCTCCGGTGGAAGAGGAGG+AGG - chr3.1:63267059-63267078 None:intergenic 65.0%
TTGCATGGACCCCCTGGGAC+TGG + chr3.1:63269176-63269195 MS.gene24744:CDS 65.0%
! ATGCAGGGGGCGCAGAAAGG+AGG - chr3.1:63271512-63271531 None:intergenic 65.0%
! GGAGGGGGAGATGGTGGTAG+AGG - chr3.1:63267041-63267060 None:intergenic 65.0%
! GGGAAGCTACGGCGCCGTTT+TGG - chr3.1:63267010-63267029 None:intergenic 65.0%
!! GCGCCGTTTTGGTCGGTCGT+AGG - chr3.1:63266999-63267018 None:intergenic 65.0%
CCCTCCTCCTCTTCCACCGG+AGG + chr3.1:63267055-63267074 MS.gene24744:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 63266798 63272859 63266798 ID=MS.gene24744
chr3.1 mRNA 63266798 63272859 63266798 ID=MS.gene24744.t1;Parent=MS.gene24744
chr3.1 exon 63266798 63267095 63266798 ID=MS.gene24744.t1.exon1;Parent=MS.gene24744.t1
chr3.1 CDS 63266798 63267095 63266798 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63267183 63267246 63267183 ID=MS.gene24744.t1.exon2;Parent=MS.gene24744.t1
chr3.1 CDS 63267183 63267246 63267183 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63267431 63267537 63267431 ID=MS.gene24744.t1.exon3;Parent=MS.gene24744.t1
chr3.1 CDS 63267431 63267537 63267431 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63268027 63268094 63268027 ID=MS.gene24744.t1.exon4;Parent=MS.gene24744.t1
chr3.1 CDS 63268027 63268094 63268027 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63268643 63268746 63268643 ID=MS.gene24744.t1.exon5;Parent=MS.gene24744.t1
chr3.1 CDS 63268643 63268746 63268643 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63268846 63268950 63268846 ID=MS.gene24744.t1.exon6;Parent=MS.gene24744.t1
chr3.1 CDS 63268846 63268950 63268846 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63269166 63269255 63269166 ID=MS.gene24744.t1.exon7;Parent=MS.gene24744.t1
chr3.1 CDS 63269166 63269255 63269166 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63269353 63269428 63269353 ID=MS.gene24744.t1.exon8;Parent=MS.gene24744.t1
chr3.1 CDS 63269353 63269428 63269353 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63271275 63271344 63271275 ID=MS.gene24744.t1.exon9;Parent=MS.gene24744.t1
chr3.1 CDS 63271275 63271344 63271275 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63271431 63271501 63271431 ID=MS.gene24744.t1.exon10;Parent=MS.gene24744.t1
chr3.1 CDS 63271431 63271501 63271431 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63271680 63271770 63271680 ID=MS.gene24744.t1.exon11;Parent=MS.gene24744.t1
chr3.1 CDS 63271680 63271770 63271680 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63272239 63272366 63272239 ID=MS.gene24744.t1.exon12;Parent=MS.gene24744.t1
chr3.1 CDS 63272239 63272366 63272239 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63272495 63272623 63272495 ID=MS.gene24744.t1.exon13;Parent=MS.gene24744.t1
chr3.1 CDS 63272495 63272623 63272495 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
chr3.1 exon 63272719 63272859 63272719 ID=MS.gene24744.t1.exon14;Parent=MS.gene24744.t1
chr3.1 CDS 63272719 63272859 63272719 ID=cds.MS.gene24744.t1;Parent=MS.gene24744.t1
Gene Sequence

>MS.gene24744

ATTTTGGAAAGTACAAGTGGCAGTAGAAGTCAAGTCATGGGCATTGAGATTTTGATTTCCGCCGAAATTAAAAGAAAACCCTCATTCAAATCAATTTTCCACTTTTCTTACCCCCTTCGTTCTCAGAGACCCACCCAGTTGCAACTCGCAAGCATCAAAATGAGCACTTCTCCTAGTCCAATGGAGACGGAGCAAAACCCTACGACCGACCAAAACGGCGCCGTAGCTTCCCAACGTTCACCTCTACCACCATCTCCCCCTCCTCCTCTTCCACCGGAGGATAAAATTCTCGTCCCTGGTACTTCCACTCTCTCTAATCTTATCTTCCTCTATTCTATAGATTCCAATTTCTCAACTAATTTTCGTTTCATTTTGCTTATTATAGTCGAGGTTTGCTTAAAACCTTCCAGCACAGCTTCAATTCACGATGTCCGTTCCGCCGTTGAGGGGTAATAATCTATCTCGCTTCTATTTTATTTTGTTATAGTTTCTAGGGTTTATAGAAATTGATTTTCTTTGTGGTTTTAGTTTTGTGTGAGGGGGTAATTGGAGACTTAAATTGAACTAATTTTAATTATTCTATCGGGTTCTGTGTTGCTTGGTGAATTTATGATAATTCAACTGGTTTTTTAGGATGCTTGAAAAGAGGAGTTTGAGCTATAATGGTGGACCGATTCCCGTTCCCCTTGACGAACCCTTTCTTGCAGATAATGTGCAAAGAATTTGCGTTTGTGATACAGGTCTGTATCTTTTTGTTTATTTTCAATTGTTTGTATGGTGGTTAACTGTTGATTTTATTGCTATCATTATGGAGTGGCAAGATATGGAACTCAATGATTTGATTTTTAAAGTATCATTTTTATTTTTGCCAATCTAAAGTTCCATTAAGACTGTCTTATGATGTGTTTGATTTTACGTTTACTCACGGCTGCCGCACGTCCAGATGCCCTTTTGTTGTGAAATTGAGAAGCTAGTAATTAGTAATTAGAGCTTCACTTTAAACGATTTTTTTTGGAGTAATTTTGACTAAATGTGGGAATCTGGCTGTGTAACCAAACAATGTCTGAGTTATACGAGTTGAATTGAGTGATTTAGCAATTAGTATGTCAATATGGAAGATAGGTAGTGTTCAAAATACAAGAATAACATAAATGCATTCCCTAGACAATATAGACTGATCAATTGCTGCTTCTCAGATTCTGATGCTAGTAACTTTTTATTTTTTATAGGTGAAGGGATGCAGAATGATAACGTTCTTTTGTTCTGGCAAGTCAAGCCTGTAGTACATGTCTTTCAGGTGATACTGATTAGTGTTGATTTTATTTCATCGACAATATATTATGTTGCAGTCTTAGTTCTCCTAAGTTGCCATATCTTTGCTTGACTAATATATTCAATGAGCATATATGGTCCTATGGTTTTTCCTTTGTGTTTTTAAATCCAAAAGGTGATAAGCTTCAATCGGTTCATCTGCTGGCTAAACAGCACAGCTCCATACACAGTCTCATGAGAGATAAAACCCATAATAAACTTCCCCCATTACAACGACACATAAGCAGAATCTGTAATCAGCTCATGGTAGAAGGTGCTGACCCACAGCTTCTAGAATGGTTTCTAACCGAAAAGAGAAAGTAACAAAAGTTGATATAATAGAAACATGCATATAGTAAACAAAGGAAAAAAAGAAGATAAAATGATATTACAATATGTTAATGCTGTAACATGCAATGTTCCATTATGCATCAACATCATCCCTCTAATTGTACTTTGCTTAGTCTAGAATCTCTTTGTTCTGTTAATGTGGTTCAGAGCTTTCTGAATATTGTCTGTATTTTGCTTTGACAGCTTAGCGAAGAAGGACCGTGTGAGGATATCAGCTCTGATGGCCAGTCTTCTAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGGTTCTTACTTCTTTGTAGTTTGTGATTTTCCCTCAACTATAGTTTTCTTGATAAAATTTTAATTAATTTACCTTGCACCATTTACCATTGCTTTTGCAGCCTAATATATGAATCTGGTCTAAAGCAAAGGTTGCTGCGGTATGCAGCAAGTGCTTTACTCTTCACTGAAAAGGCAGTTGATCCATTCCTTGTTTCATGGAACCGGTGAGTTCTAGAGATATGTATTTATTTTTGTATTGGCCTTATATGTTGTGATCACAACTTACTGATATGATTATATGTTCCTGAAAAATATCGTATCTCTACATATATTATGCATTTATATAAAATGATAGTTGAACATGAGTCAGTATGAGTGAGATGAGATGATTTACCTATGAACATATCTTAATATTTTTAGGATTTGTCATTATTTGCAGCATAATTCTTTTGCATGGACCCCCTGGGACTGGAAAGACGTCTTTATGTAAAGCATTAGCTCAGAAACTGTCAATCCGATTCAATTCGAGGTGCATTGATCTATTATTTATACTCTTAATCATATTTATCATTGAAAACAAGTAAATGAAGGGAGTACAAATTTACCTACCATTTTTTCCCACTCAGATTCCCACAGGCCCAGCTTGTTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCCGAAAGTGGGAAGCTGGTATGCATGTATGCCTTTACTTTAAGTTTCTGTCATTTTTGTATATTTCTTATTGACCTTTTGTAATTCACGCTTTTATTGCCTACTAGCTTCAATGTTTATTATATTGGTGAGCTTGGCAATCAGTTTCACGTTATGTGGGCTGGGGGCATAGAGTTTACGTACTCACCCTTGTCGCTTCAAATTGATATCAAGCTTGATCAAAGGATTGGATTGACTCAAATAGCTAGGAAAACCCACTGTTTGGTAGTTAGAATTTCATCCAGAAGATATGAAAATCCTGTTTATCCCAGTGGTATGGGCATAACTTTTGAGTTTGGGTAGTGATGCAGATCTTTAACTATTAGCTAGCATTGGTTAAGGTTGCTCATATGCCCATTCTACCTTTATATGATGGATAAAAATTACCAACTTTATGTTTGAAGACACATTCTTAGAGGATTATTATGCTGGGAGGTCGACTTAGTTTATAATATCCTTTTTTGCCATCTTTATCCTGGACTTGGTAGTATTGTCCGTGCATTGATAAAGTGTTTTGATTTCCTGTGGGAGGGTATTCAGGAAAAATAGGTTCATCGGTGTATAAAGACACGCCATACAAAAGCATACACATTTGCAGACTAGCATTAACATTTGTATTAAAAAGCAAAAAAATGGTCAACACCATCTTCATTGTGATTGGTACTTTCGGAATTGAAGCATCAAGTTGCCATTTATTACATCTTATTATTAGTCTGGTTTTGCAAGGCATACTGTATCGGTTTTGACATTGGTCTGCAAAAAAGAAAGTTTGCAGTAGATGCTTGCTTAAGCAGAAGATGATGCTGGATGGTTTCTTATGGTGCCTGAAACTCTGAACCTATGTACTACCATAATCATATAGAACAACAACAACCAAACCCTATCCCACTAAGTTTGGTCGGTACATGGATCAAATTACACCATAATGTTCTATCATAAACCATATTTCGGTCCAACTCAGTAATCTCTAAATCCTTCTTAATAGTTTCTCTTATAGTTTTTCTAGGTCTTCCTCTGCCTCTACTACCATACTAACAATAAATGGCAGTAAAACTTATTACACAATAGATTACCCATACAGGATGAAAAAGAAAATATATATATTTTTTATTTTTAAAAAGGGCAACCAGGTTCTACAAAACTCCCACCATGACTAGGTCAATTCCAACCATTGAACCAACCACCAGGGATTCTTGTATAACGAAATAAGTGGCTGTAGCATAGTATACTATACATCTATACATACTCGACATTGAATTTCTATATTTTATTTTATTTTTTATCTAAACTCCATGAAGCATATTAACTATGAAGAGGATGCCACATGTTAGGGCACGGTTGATTTGCAGTCAGCAGTTTGTAATCAATATTAGTTCATTGAGATGCTTAGCCTATGTTTAATCACATGTATTCAAGAAAAAAAAAAAAAAAAAAGTATACCAAATGGCCACATAATCCTATTATGGATACTGCAAACATTTTTATGTAGTCTGCCATTTTTCCCTGGATAATATTTTCTGTTCATTATATGTGTGTTTGTGTGTGTGAAAAATAATGTATGATTAACTAGTAAATTACATGTATCATTTAGGTGGGCATTTGGAATCATTAGTCATAAATTATGTTATTTCCCTTAACTATAGTCCAATAATCTCTTAATAGTATCATTTGACTATCTGTTTTGGAATTTAAGGAATTTTGAATCACAGAGATTAATAAGTCAATTGGTGAACATACGAACTGTAACAAAGCAATATACTATACATGAACCAAAGTTGTAGTTTTGTTGTGTCAAATGCGTAACGGTGTCTCTTTATTTTTCTAGGTAGCAAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAGGCAATCTGGTATTTGTTTTGATCGGTGAGGCATAATTGAAGAAAAATCAACTTACTGCATGTGTATATTTTTATAAGTCTACTTACTTATATATGTTTGCGATCCTGCAGATGAAGTCGAAAGCCTTGCTGCTGCTAGAAAAGCTGCTTTGTCTGGTTCCGAACCTTCTGATTCTATTCGGGTAAAATCCTCCTTTCTGCGCCCCCTGCATGAATAAACTCCCTCCCTCCCCACGATTTTTTGAAAATGCGATAGATTGTTGCACATCGTCACAAACATGTAAAAATTTAGTTCAGAAGTAATGACTTCTTTATGGGTGTCTGTAATAATATGGGTTCAATCTGAATATTCAATTTCAGGTTGTCAATGCATTATTAACTCAGATGGATAAGTTAAAATCATCTCCAAATGTGATAATTCTAACCACATCCAACATTACTGCTGCTATCGGTAAGCCTATATCACTTTCTCATCATTCAATTTTGCAGCTTATGTCCTTGTAAGTTATCTGCTGTTCTCTCCCATAAATATTATATTGATAGTTAGATCTGTCCTTGTCATTATACATCAGTCTAATTTTTATTTGAGAACTGAAGATCTAGCTTCCCTTAATGAGGATTTAGTGATTAAATGACCGTAAAAAAAATGGGAATGCACTGAATGAAAGTCAAATTGCTAAATTATTAAGCACAGACTTCTGTTGCCAGCATCAGACAAACAATAACATGCCTGGATCTGGAATTAACCTTACTTTAACATAAAGCACATCACAAGAAAAACCTTTTTCCACTAGTTAGGAACACCACTCCAATGTCTTCCTAAAATAGTTTCTTCATGATCCACTTCCCCAATATATTTTCATTTGAAACGTATACTACAAATTTCACAGATCATACAATTTTATCAATTTCATTGCAGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGCCCACCAACTCTTCAAGCCCGGTATGAAATATTAAGGTCTTGTGTGCAGGAACTTATGCGTACAGGGATATTAACTAATTTTGAGGTACAGATAGGTCTCAATCTTCTCCCGGAATCTTTTTCGAAAATGAAAGGCATTAATAATCTAATCTTTATTTGGATTCAGATATTTTAGTTTGTTAATCTAATGGATAATCATGCTGACTTGGTTAGGATTGTAAGAATATCGTGCTTCCAAATTATGCTAGTGCAAAACAGAGAACGAACGCACCAGATTTTCATGAAGCTACTACATTCATGCAACTGTGCAAGAAATTAGTTGAAACTGCAGAGGCATGTGAGGTAGGAAAAAAAGATAACACTTGTGGATCTTTAACCTCACAATCTTTAGGTCAACCTTTATTTCTCAATAACTGCTGTGTTTGATCTGTCCACAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCATTTTTGGCACATGCTGCACTTGCAAATCCTTTTGATTGCAATCCTATCAAGTTCTTATGTACAATGATAGATACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA
Protein sequence

>MS.gene24744.t1

ILESTSGSRSQVMGIEILISAEIKRKPSFKSIFHFSYPLRSQRPTQLQLASIKMSTSPSPMETEQNPTTDQNGAVASQRSPLPPSPPPPLPPEDKILVPVEVCLKPSSTASIHDVRSAVEGMLEKRSLSYNGGPIPVPLDEPFLADNVQRICVCDTGEGMQNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQAQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTGILTNFEDCKNIVLPNYASAKQRTNAPDFHEATTFMQLCKKLVETAEACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSELPD