Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25014.t1 | XP_013444504.1 | 94.3 | 247 | 14 | 0 | 1 | 247 | 83 | 329 | 1.20E-136 | 495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25014.t1 | O74507 | 23.9 | 255 | 162 | 10 | 2 | 233 | 80 | 325 | 3.1e-08 | 60.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25014.t1 | G7ZZ33 | 94.3 | 247 | 14 | 0 | 1 | 247 | 83 | 329 | 8.7e-137 | 495.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050991 | MS.gene25014 | 0.916824 | 1.12E-85 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25014.t1 | MTR_8g023760 | 94.332 | 247 | 14 | 0 | 1 | 247 | 83 | 329 | 3.76e-174 | 482 |
| MS.gene25014.t1 | MTR_7g117475 | 69.412 | 255 | 61 | 4 | 1 | 247 | 69 | 314 | 8.37e-128 | 364 |
| MS.gene25014.t1 | MTR_8g107030 | 31.034 | 203 | 103 | 9 | 55 | 237 | 87 | 272 | 3.38e-12 | 65.5 |
| MS.gene25014.t1 | MTR_8g107030 | 31.034 | 203 | 103 | 9 | 55 | 237 | 118 | 303 | 4.73e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25014.t1 | AT2G46890 | 71.255 | 247 | 71 | 0 | 1 | 247 | 76 | 322 | 1.49e-135 | 384 |
| MS.gene25014.t1 | AT1G18180 | 32.394 | 213 | 119 | 8 | 28 | 232 | 61 | 256 | 2.44e-13 | 68.6 |
| MS.gene25014.t1 | AT1G18180 | 32.394 | 213 | 119 | 8 | 28 | 232 | 61 | 256 | 2.60e-13 | 68.6 |
| MS.gene25014.t1 | AT1G73650 | 33.491 | 212 | 118 | 9 | 28 | 232 | 61 | 256 | 2.89e-11 | 62.4 |
| MS.gene25014.t1 | AT1G73650 | 33.491 | 212 | 118 | 9 | 28 | 232 | 61 | 256 | 3.39e-11 | 62.4 |
| MS.gene25014.t1 | AT1G73650 | 33.491 | 212 | 118 | 9 | 28 | 232 | 61 | 256 | 3.49e-11 | 62.4 |
Find 63 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACATGGATGGACCTTTAT+TGG | 0.173583 | 8.1:-77054791 | MS.gene25014:CDS |
| ATTACTTTAGACGTGAAAAT+TGG | 0.244208 | 8.1:-77056629 | MS.gene25014:CDS |
| CAACAAGCCTTTGAGTATCT+TGG | 0.301287 | 8.1:-77055032 | MS.gene25014:CDS |
| GCCATTGTTGTTTGTTTAAG+TGG | 0.340682 | 8.1:-77055001 | MS.gene25014:CDS |
| GACGCTGTGGTGGTGGGGAC+TGG | 0.351750 | 8.1:-77054834 | MS.gene25014:CDS |
| ACAGGGATCACTGTCCAATA+TGG | 0.356410 | 8.1:+77056759 | None:intergenic |
| GTGTCAAGTACAGGGATTAC+AGG | 0.360789 | 8.1:+77054899 | None:intergenic |
| ATGGACCTTTATTGGAGCTT+TGG | 0.373438 | 8.1:-77054783 | MS.gene25014:CDS |
| ATTAACCAAAGCTCCAATAA+AGG | 0.385986 | 8.1:+77054778 | None:intergenic |
| TGCTGTTTATGTCTCTCAGC+AGG | 0.392466 | 8.1:-77056526 | MS.gene25014:intron |
| TGCAGATGATTGATCCATAT+TGG | 0.392989 | 8.1:-77056773 | None:intergenic |
| CTTTGGCTCAATATGATTTG+TGG | 0.396285 | 8.1:-77056707 | MS.gene25014:CDS |
| ACAAAGTGCACAACATATAA+AGG | 0.399002 | 8.1:+77055055 | None:intergenic |
| ACTGAGATGGGTCAACAGTA+TGG | 0.413473 | 8.1:-77056576 | MS.gene25014:CDS |
| TTACTATGCAACACACCCTT+TGG | 0.420431 | 8.1:-77056724 | MS.gene25014:CDS |
| TTTGAGTATCTTGGACTTGG+TGG | 0.426220 | 8.1:-77055023 | MS.gene25014:CDS |
| TTGGTGAGACGCTGTGGTGG+TGG | 0.429994 | 8.1:-77054841 | MS.gene25014:CDS |
| TAGACGTGAAAATTGGCAAT+GGG | 0.432505 | 8.1:-77056622 | MS.gene25014:CDS |
| GCCTTTGAGTATCTTGGACT+TGG | 0.442227 | 8.1:-77055026 | MS.gene25014:CDS |
| GGGGACTGGTTGTGTTTGCA+TGG | 0.461450 | 8.1:-77054820 | MS.gene25014:CDS |
| TGGTGAGACGCTGTGGTGGT+GGG | 0.471699 | 8.1:-77054840 | MS.gene25014:CDS |
| AGATTGGCGTTTCACTGAGA+TGG | 0.473542 | 8.1:-77056589 | MS.gene25014:CDS |
| AGCGTCTCACCAAAGTAATT+CGG | 0.476940 | 8.1:+77054851 | None:intergenic |
| AGCCGGCGTCCGAATTACTT+TGG | 0.477007 | 8.1:-77054860 | MS.gene25014:CDS |
| AGCTTATGTGACTAGGCTTG+TGG | 0.481619 | 8.1:-77054744 | MS.gene25014:CDS |
| CTGTACTTGACACTGGCCTA+TGG | 0.484981 | 8.1:-77054889 | MS.gene25014:CDS |
| TAGTAATGAACAAGCATCAC+AGG | 0.485910 | 8.1:+77056741 | None:intergenic |
| AACAACAAGTTCAAAGAGCT+TGG | 0.488952 | 8.1:-77054926 | MS.gene25014:CDS |
| CAACTTCAGCGTGGATACCT+TGG | 0.496899 | 8.1:-77054664 | MS.gene25014:CDS |
| TGTGTTTAGCTTATGTGACT+AGG | 0.502231 | 8.1:-77054751 | MS.gene25014:CDS |
| CATAGGCCAGTGTCAAGTAC+AGG | 0.512081 | 8.1:+77054890 | None:intergenic |
| CACAAATCATATTGAGCCAA+AGG | 0.525947 | 8.1:+77056708 | None:intergenic |
| GATTGGCGTTTCACTGAGAT+GGG | 0.529607 | 8.1:-77056588 | MS.gene25014:CDS |
| CATGGAACCTTGGACATGGA+TGG | 0.532497 | 8.1:-77054802 | MS.gene25014:CDS |
| GTTGTGTTTGCATGGAACCT+TGG | 0.534053 | 8.1:-77054812 | MS.gene25014:CDS |
| AATGGGGTGCTAGAGAAGAT+TGG | 0.536653 | 8.1:-77056605 | MS.gene25014:CDS |
| GGTGAGACGCTGTGGTGGTG+GGG | 0.545609 | 8.1:-77054839 | MS.gene25014:CDS |
| AGTATGGAAAACATTGGTGG+TGG | 0.552479 | 8.1:-77056560 | MS.gene25014:CDS |
| ACAAATCATATTGAGCCAAA+GGG | 0.557331 | 8.1:+77056709 | None:intergenic |
| AGTGCACAACATATAAAGGA+AGG | 0.575974 | 8.1:+77055059 | None:intergenic |
| GAAGGAAATGACTTAAACCA+AGG | 0.582801 | 8.1:+77054647 | None:intergenic |
| CTGGCCTATGGTATTACAGC+CGG | 0.588511 | 8.1:-77054877 | MS.gene25014:CDS |
| TGGCTCAATATGATTTGTGG+AGG | 0.590226 | 8.1:-77056704 | MS.gene25014:CDS |
| GTAATCCCTGTACTTGACAC+TGG | 0.592824 | 8.1:-77054896 | MS.gene25014:CDS |
| AACAGTATGGAAAACATTGG+TGG | 0.610863 | 8.1:-77056563 | MS.gene25014:CDS |
| GTATGGAAAACATTGGTGGT+GGG | 0.614678 | 8.1:-77056559 | MS.gene25014:CDS |
| ACCAAGTCCAAGATACTCAA+AGG | 0.615189 | 8.1:+77055025 | None:intergenic |
| TTTGCATGGAACCTTGGACA+TGG | 0.616196 | 8.1:-77054806 | MS.gene25014:CDS |
| TTAGACGTGAAAATTGGCAA+TGG | 0.620026 | 8.1:-77056623 | MS.gene25014:CDS |
| TAAAGGTCCATCCATGTCCA+AGG | 0.620673 | 8.1:+77054795 | None:intergenic |
| GCCACTTAAACAAACAACAA+TGG | 0.625714 | 8.1:+77055000 | None:intergenic |
| ATAGGCCAGTGTCAAGTACA+GGG | 0.634937 | 8.1:+77054891 | None:intergenic |
| CACCAAAGTAATTCGGACGC+CGG | 0.635129 | 8.1:+77054858 | None:intergenic |
| GTGCACAACATATAAAGGAA+GGG | 0.637619 | 8.1:+77055060 | None:intergenic |
| ATTACTTTGGTGAGACGCTG+TGG | 0.656576 | 8.1:-77054847 | MS.gene25014:CDS |
| TTATGTGACTAGGCTTGTGG+AGG | 0.657735 | 8.1:-77054741 | MS.gene25014:CDS |
| GTCAACAGTATGGAAAACAT+TGG | 0.662582 | 8.1:-77056566 | MS.gene25014:CDS |
| AGTAATGAACAAGCATCACA+GGG | 0.679888 | 8.1:+77056742 | None:intergenic |
| AGACGTGAAAATTGGCAATG+GGG | 0.680331 | 8.1:-77056621 | MS.gene25014:CDS |
| GACGCCGGCTGTAATACCAT+AGG | 0.684582 | 8.1:+77054873 | None:intergenic |
| ACTTTGGTGAGACGCTGTGG+TGG | 0.689623 | 8.1:-77054844 | MS.gene25014:CDS |
| ATCAGAAGACAACTTCAGCG+TGG | 0.695728 | 8.1:-77054673 | MS.gene25014:CDS |
| AGTCACATAAGCTAAACACA+AGG | 0.719129 | 8.1:+77054754 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATATCATTGTGTT+TGG | - | chr8.1:77055989-77056008 | MS.gene25014:intron | 15.0% |
| !!! | ACTTTTTTCTAACAATTAAA+TGG | - | chr8.1:77055896-77055915 | MS.gene25014:intron | 15.0% |
| !!! | ATTGAAATTTTACGATTTTA+GGG | - | chr8.1:77055156-77055175 | MS.gene25014:intron | 15.0% |
| !!! | ATTTTTTTTATAGATATGAC+TGG | + | chr8.1:77055513-77055532 | None:intergenic | 15.0% |
| !!! | CAATGATATTAATTTTATCA+AGG | + | chr8.1:77055985-77056004 | None:intergenic | 15.0% |
| !!! | TGTTAGTTATTTCTATTTTT+CGG | - | chr8.1:77055278-77055297 | MS.gene25014:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGACAGA+AGG | + | chr8.1:77056105-77056124 | None:intergenic | 15.0% |
| !! | AAAATAAGTGAATAATGTCT+TGG | - | chr8.1:77055094-77055113 | MS.gene25014:intron | 20.0% |
| !! | AAATATAGAAGATTAAGAGA+TGG | + | chr8.1:77056082-77056101 | None:intergenic | 20.0% |
| !! | ATATAAGCAAAATTGAATCA+AGG | + | chr8.1:77055448-77055467 | None:intergenic | 20.0% |
| !! | TTGAATTATATATAATTCGG+AGG | - | chr8.1:77055185-77055204 | MS.gene25014:intron | 20.0% |
| !!! | ATTAACATTTTGCAATTTCA+AGG | + | chr8.1:77055002-77055021 | None:intergenic | 20.0% |
| !!! | GATTGAAATTTTACGATTTT+AGG | - | chr8.1:77055155-77055174 | MS.gene25014:intron | 20.0% |
| !!! | GTCTATTTTTATTATTAGTC+AGG | + | chr8.1:77055742-77055761 | None:intergenic | 20.0% |
| !!! | TTCTTAATTTTAACATCTGA+AGG | + | chr8.1:77056764-77056783 | None:intergenic | 20.0% |
| !!! | TTGCTTATATTTTATATCAG+AGG | + | chr8.1:77055376-77055395 | None:intergenic | 20.0% |
| !!! | TTTGGAGTAAATAATCAATT+TGG | - | chr8.1:77054950-77054969 | MS.gene25014:CDS | 20.0% |
| ! | AAAGATGTTTGAACGATTAA+CGG | + | chr8.1:77055643-77055662 | None:intergenic | 25.0% |
| ! | AATAATTGGCACATTCTTAA+AGG | + | chr8.1:77055317-77055336 | None:intergenic | 25.0% |
| ! | ATCTATATTTCCTTTGTGTT+AGG | - | chr8.1:77056124-77056143 | MS.gene25014:intron | 25.0% |
| ! | ATTACTTTAGACGTGAAAAT+TGG | - | chr8.1:77054761-77054780 | MS.gene25014:CDS | 25.0% |
| ! | TCAAAAAAAATTGTCATGTG+CGG | + | chr8.1:77055343-77055362 | None:intergenic | 25.0% |
| ! | TGATATCAGATTATGAAAGA+GGG | - | chr8.1:77055124-77055143 | MS.gene25014:intron | 25.0% |
| ! | TTGATATCAGATTATGAAAG+AGG | - | chr8.1:77055123-77055142 | MS.gene25014:intron | 25.0% |
| !! | TGCTTATATTTTGTAACAGA+GGG | - | chr8.1:77055459-77055478 | MS.gene25014:intron | 25.0% |
| !! | TTGCTTATATTTTGTAACAG+AGG | - | chr8.1:77055458-77055477 | MS.gene25014:intron | 25.0% |
| !!! | TGTCTGTTTGGTTTAATTTT+TGG | - | chr8.1:77054932-77054951 | MS.gene25014:CDS | 25.0% |
| AATCAAATCCTTTCCTTTGT+TGG | - | chr8.1:77055019-77055038 | MS.gene25014:CDS | 30.0% | |
| AATTGCAATGGAAATCAACA+CGG | - | chr8.1:77056219-77056238 | MS.gene25014:intron | 30.0% | |
| ACAAAGTGCACAACATATAA+AGG | + | chr8.1:77056338-77056357 | None:intergenic | 30.0% | |
| ACAAATCATATTGAGCCAAA+GGG | + | chr8.1:77054684-77054703 | None:intergenic | 30.0% | |
| AGAGTGAATTTGAATTGCAA+TGG | - | chr8.1:77056207-77056226 | MS.gene25014:intron | 30.0% | |
| ATTAACCAAAGCTCCAATAA+AGG | + | chr8.1:77056615-77056634 | None:intergenic | 30.0% | |
| CAATTCATCAAACATGTTCA+AGG | + | chr8.1:77054914-77054933 | None:intergenic | 30.0% | |
| TGGCGATAAAAACATTTCAT+AGG | - | chr8.1:77055587-77055606 | MS.gene25014:intron | 30.0% | |
| TGTTTGATGAATTGTCTGTT+TGG | - | chr8.1:77054920-77054939 | MS.gene25014:CDS | 30.0% | |
| ! | AGATTGTGATTTTGTTGAGT+TGG | - | chr8.1:77054713-77054732 | MS.gene25014:CDS | 30.0% |
| ! | GATTGTGATTTTGTTGAGTT+GGG | - | chr8.1:77054714-77054733 | MS.gene25014:CDS | 30.0% |
| ! | TATTTTGTGAGTTGTTAGTC+AGG | - | chr8.1:77056184-77056203 | MS.gene25014:intron | 30.0% |
| ! | TGTGAAGAATTGATTTCTGT+AGG | - | chr8.1:77055928-77055947 | MS.gene25014:intron | 30.0% |
| ! | TTTTCAATGCACAAATGACA+AGG | + | chr8.1:77056267-77056286 | None:intergenic | 30.0% |
| !! | TGACATTAAGTTGGTAATGT+CGG | - | chr8.1:77055060-77055079 | MS.gene25014:CDS | 30.0% |
| !! | TTTGTGCAGATGTTTTTGAT+TGG | - | chr8.1:77056302-77056321 | MS.gene25014:intron | 30.0% |
| !!! | ATTTCTATTTTTCGGTGTTG+AGG | - | chr8.1:77055286-77055305 | MS.gene25014:intron | 30.0% |
| !!! | TTTCTATTTTTCGGTGTTGA+GGG | - | chr8.1:77055287-77055306 | MS.gene25014:intron | 30.0% |
| AAATAACAGGCCTAACACAA+AGG | + | chr8.1:77056137-77056156 | None:intergenic | 35.0% | |
| AACAACAAGTTCAAAGAGCT+TGG | - | chr8.1:77056464-77056483 | MS.gene25014:intron | 35.0% | |
| AACAGTATGGAAAACATTGG+TGG | - | chr8.1:77054827-77054846 | MS.gene25014:CDS | 35.0% | |
| AATCAATTTGGTCCCTGATA+TGG | - | chr8.1:77054962-77054981 | MS.gene25014:CDS | 35.0% | |
| ACGTGTGTGAAATTTGAACT+TGG | + | chr8.1:77055767-77055786 | None:intergenic | 35.0% | |
| AGTAATGAACAAGCATCACA+GGG | + | chr8.1:77054651-77054670 | None:intergenic | 35.0% | |
| AGTCACATAAGCTAAACACA+AGG | + | chr8.1:77056639-77056658 | None:intergenic | 35.0% | |
| AGTGCACAACATATAAAGGA+AGG | + | chr8.1:77056334-77056353 | None:intergenic | 35.0% | |
| CACAAATCATATTGAGCCAA+AGG | + | chr8.1:77054685-77054704 | None:intergenic | 35.0% | |
| CTTGTCTCACTGAAATTTGA+TGG | - | chr8.1:77055567-77055586 | MS.gene25014:intron | 35.0% | |
| GAAGGAAATGACTTAAACCA+AGG | + | chr8.1:77056746-77056765 | None:intergenic | 35.0% | |
| GCCACTTAAACAAACAACAA+TGG | + | chr8.1:77056393-77056412 | None:intergenic | 35.0% | |
| GGACTAAAGTGACATTAAGT+TGG | - | chr8.1:77055051-77055070 | MS.gene25014:CDS | 35.0% | |
| GTCAACAGTATGGAAAACAT+TGG | - | chr8.1:77054824-77054843 | MS.gene25014:CDS | 35.0% | |
| GTGCACAACATATAAAGGAA+GGG | + | chr8.1:77056333-77056352 | None:intergenic | 35.0% | |
| TAGAATGTAACCACATGTGT+TGG | + | chr8.1:77055257-77055276 | None:intergenic | 35.0% | |
| TAGACGTGAAAATTGGCAAT+GGG | - | chr8.1:77054768-77054787 | MS.gene25014:CDS | 35.0% | |
| TAGTAATGAACAAGCATCAC+AGG | + | chr8.1:77054652-77054671 | None:intergenic | 35.0% | |
| TGATTCCGCTGAAAAATAAC+AGG | + | chr8.1:77056150-77056169 | None:intergenic | 35.0% | |
| TGCAATTTCAAGGATCACTT+TGG | + | chr8.1:77054992-77055011 | None:intergenic | 35.0% | |
| TTAGACGTGAAAATTGGCAA+TGG | - | chr8.1:77054767-77054786 | MS.gene25014:CDS | 35.0% | |
| TTCACACACGTCACTAAAAA+TGG | - | chr8.1:77055776-77055795 | MS.gene25014:intron | 35.0% | |
| ! | CTTTGGCTCAATATGATTTG+TGG | - | chr8.1:77054683-77054702 | MS.gene25014:CDS | 35.0% |
| ! | TGTGTTTAGCTTATGTGACT+AGG | - | chr8.1:77056639-77056658 | MS.gene25014:CDS | 35.0% |
| !! | CACTTTGGAATACCATATCA+GGG | + | chr8.1:77054977-77054996 | None:intergenic | 35.0% |
| !! | GCCATTGTTGTTTGTTTAAG+TGG | - | chr8.1:77056389-77056408 | MS.gene25014:intron | 35.0% |
| !! | GGAATTTCTAGTTTCAGCTA+TGG | - | chr8.1:77056010-77056029 | MS.gene25014:intron | 35.0% |
| !! | TCACTTTGGAATACCATATC+AGG | + | chr8.1:77054978-77054997 | None:intergenic | 35.0% |
| !! | TGTTGTGTTAGCGTTGTTTT+TGG | - | chr8.1:77055819-77055838 | MS.gene25014:intron | 35.0% |
| !!! | TGATTTTGTTGAGTTGGGTT+TGG | - | chr8.1:77054719-77054738 | MS.gene25014:CDS | 35.0% |
| !!! | TTAGGCCTGTTATTTTTCAG+CGG | - | chr8.1:77056142-77056161 | MS.gene25014:intron | 35.0% |
| !!! | TTCTATTTTTCGGTGTTGAG+GGG | - | chr8.1:77055288-77055307 | MS.gene25014:intron | 35.0% |
| ACAACGCTAACACAACACAT+AGG | + | chr8.1:77055816-77055835 | None:intergenic | 40.0% | |
| ACCAAGTCCAAGATACTCAA+AGG | + | chr8.1:77056368-77056387 | None:intergenic | 40.0% | |
| AGACGTGAAAATTGGCAATG+GGG | - | chr8.1:77054769-77054788 | MS.gene25014:CDS | 40.0% | |
| AGCGTCTCACCAAAGTAATT+CGG | + | chr8.1:77056542-77056561 | None:intergenic | 40.0% | |
| AGTATGGAAAACATTGGTGG+TGG | - | chr8.1:77054830-77054849 | MS.gene25014:CDS | 40.0% | |
| ATGGACCTTTATTGGAGCTT+TGG | - | chr8.1:77056607-77056626 | MS.gene25014:CDS | 40.0% | |
| CAAATCCTTTCCTTTGTTGG+TGG | - | chr8.1:77055022-77055041 | MS.gene25014:CDS | 40.0% | |
| CAACAAGCCTTTGAGTATCT+TGG | - | chr8.1:77056358-77056377 | MS.gene25014:intron | 40.0% | |
| CTAACACAACACATAGGCAT+CGG | + | chr8.1:77055810-77055829 | None:intergenic | 40.0% | |
| GTCATGTGCGGACAAATAAT+TGG | + | chr8.1:77055331-77055350 | None:intergenic | 40.0% | |
| TAGTGGGATCTGACATGTTA+CGG | - | chr8.1:77055222-77055241 | MS.gene25014:intron | 40.0% | |
| TATCACCACCAACAAAGGAA+AGG | + | chr8.1:77055030-77055049 | None:intergenic | 40.0% | |
| TTACTATGCAACACACCCTT+TGG | - | chr8.1:77054666-77054685 | MS.gene25014:CDS | 40.0% | |
| TTTGAGTATCTTGGACTTGG+TGG | - | chr8.1:77056367-77056386 | MS.gene25014:intron | 40.0% | |
| ! | GTATGGAAAACATTGGTGGT+GGG | - | chr8.1:77054831-77054850 | MS.gene25014:CDS | 40.0% |
| ! | TGGCTCAATATGATTTGTGG+AGG | - | chr8.1:77054686-77054705 | MS.gene25014:CDS | 40.0% |
| !! | TTCCTTTGTTGGTGGTGATA+TGG | - | chr8.1:77055030-77055049 | MS.gene25014:CDS | 40.0% |
| ACAGGGATCACTGTCCAATA+TGG | + | chr8.1:77054634-77054653 | None:intergenic | 45.0% | |
| ACATGTCAGATCCCACTAAG+CGG | + | chr8.1:77055220-77055239 | None:intergenic | 45.0% | |
| ACTGAGATGGGTCAACAGTA+TGG | - | chr8.1:77054814-77054833 | MS.gene25014:CDS | 45.0% | |
| AGATTGGCGTTTCACTGAGA+TGG | - | chr8.1:77054801-77054820 | MS.gene25014:CDS | 45.0% | |
| AGCTTATGTGACTAGGCTTG+TGG | - | chr8.1:77056646-77056665 | MS.gene25014:CDS | 45.0% | |
| ATAGGCCAGTGTCAAGTACA+GGG | + | chr8.1:77056502-77056521 | None:intergenic | 45.0% | |
| ATCAGAAGACAACTTCAGCG+TGG | - | chr8.1:77056717-77056736 | MS.gene25014:CDS | 45.0% | |
| ATTACTTTGGTGAGACGCTG+TGG | - | chr8.1:77056543-77056562 | MS.gene25014:CDS | 45.0% | |
| GATTGGCGTTTCACTGAGAT+GGG | - | chr8.1:77054802-77054821 | MS.gene25014:CDS | 45.0% | |
| GCCTTTGAGTATCTTGGACT+TGG | - | chr8.1:77056364-77056383 | MS.gene25014:intron | 45.0% | |
| GGACATGGATGGACCTTTAT+TGG | - | chr8.1:77056599-77056618 | MS.gene25014:CDS | 45.0% | |
| GTAATCCCTGTACTTGACAC+TGG | - | chr8.1:77056494-77056513 | MS.gene25014:intron | 45.0% | |
| GTCCATATCACCACCAACAA+AGG | + | chr8.1:77055035-77055054 | None:intergenic | 45.0% | |
| GTGTCAAGTACAGGGATTAC+AGG | + | chr8.1:77056494-77056513 | None:intergenic | 45.0% | |
| GTTGTGTTTGCATGGAACCT+TGG | - | chr8.1:77056578-77056597 | MS.gene25014:CDS | 45.0% | |
| GTTTATGTCTCTCAGCAGGT+TGG | - | chr8.1:77054868-77054887 | MS.gene25014:CDS | 45.0% | |
| TAAAGGTCCATCCATGTCCA+AGG | + | chr8.1:77056598-77056617 | None:intergenic | 45.0% | |
| TTATGTGACTAGGCTTGTGG+AGG | - | chr8.1:77056649-77056668 | MS.gene25014:CDS | 45.0% | |
| TTTGCATGGAACCTTGGACA+TGG | - | chr8.1:77056584-77056603 | MS.gene25014:CDS | 45.0% | |
| ! | AATGGGGTGCTAGAGAAGAT+TGG | - | chr8.1:77054785-77054804 | MS.gene25014:CDS | 45.0% |
| ! | GTAACCACATGTGTTGGTGT+TGG | + | chr8.1:77055251-77055270 | None:intergenic | 45.0% |
| ! | TGCTGTTTATGTCTCTCAGC+AGG | - | chr8.1:77054864-77054883 | MS.gene25014:CDS | 45.0% |
| !!! | CTCTCAGCAGGTTGGTTTTT+TGG | - | chr8.1:77054876-77054895 | MS.gene25014:CDS | 45.0% |
| !!! | ATTTTGAATTATATATAATT+CGG | - | chr8.1:77055182-77055201 | MS.gene25014:intron | 5.0% |
| AGGACTAAGTTCCCGCTTAG+TGG | - | chr8.1:77055205-77055224 | MS.gene25014:intron | 50.0% | |
| CAACTTCAGCGTGGATACCT+TGG | - | chr8.1:77056726-77056745 | MS.gene25014:CDS | 50.0% | |
| CACCAAAGTAATTCGGACGC+CGG | + | chr8.1:77056535-77056554 | None:intergenic | 50.0% | |
| CATAGGCCAGTGTCAAGTAC+AGG | + | chr8.1:77056503-77056522 | None:intergenic | 50.0% | |
| CATGGAACCTTGGACATGGA+TGG | - | chr8.1:77056588-77056607 | MS.gene25014:CDS | 50.0% | |
| CATGTCAGATCCCACTAAGC+GGG | + | chr8.1:77055219-77055238 | None:intergenic | 50.0% | |
| CTGGCCTATGGTATTACAGC+CGG | - | chr8.1:77056513-77056532 | MS.gene25014:intron | 50.0% | |
| GGACTAAGTTCCCGCTTAGT+GGG | - | chr8.1:77055206-77055225 | MS.gene25014:intron | 50.0% | |
| GTGTCCAACACCAACACATG+TGG | - | chr8.1:77055244-77055263 | MS.gene25014:intron | 50.0% | |
| ! | CTGTACTTGACACTGGCCTA+TGG | - | chr8.1:77056501-77056520 | MS.gene25014:intron | 50.0% |
| ACTTTGGTGAGACGCTGTGG+TGG | - | chr8.1:77056546-77056565 | MS.gene25014:CDS | 55.0% | |
| AGCCGGCGTCCGAATTACTT+TGG | - | chr8.1:77056530-77056549 | MS.gene25014:CDS | 55.0% | |
| ! | GACGCCGGCTGTAATACCAT+AGG | + | chr8.1:77056520-77056539 | None:intergenic | 55.0% |
| !! | GGGGACTGGTTGTGTTTGCA+TGG | - | chr8.1:77056570-77056589 | MS.gene25014:CDS | 55.0% |
| TGGTGAGACGCTGTGGTGGT+GGG | - | chr8.1:77056550-77056569 | MS.gene25014:CDS | 60.0% | |
| TTGGTGAGACGCTGTGGTGG+TGG | - | chr8.1:77056549-77056568 | MS.gene25014:CDS | 60.0% | |
| ! | GGTGAGACGCTGTGGTGGTG+GGG | - | chr8.1:77056551-77056570 | MS.gene25014:CDS | 65.0% |
| !! | GACGCTGTGGTGGTGGGGAC+TGG | - | chr8.1:77056556-77056575 | MS.gene25014:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 77054622 | 77056790 | 77054622 | ID=MS.gene25014 |
| chr8.1 | mRNA | 77054622 | 77056790 | 77054622 | ID=MS.gene25014.t1;Parent=MS.gene25014 |
| chr8.1 | exon | 77056527 | 77056790 | 77056527 | ID=MS.gene25014.t1.exon1;Parent=MS.gene25014.t1 |
| chr8.1 | CDS | 77056527 | 77056790 | 77056527 | ID=cds.MS.gene25014.t1;Parent=MS.gene25014.t1 |
| chr8.1 | exon | 77054622 | 77055101 | 77054622 | ID=MS.gene25014.t1.exon2;Parent=MS.gene25014.t1 |
| chr8.1 | CDS | 77054622 | 77055101 | 77054622 | ID=cds.MS.gene25014.t1;Parent=MS.gene25014.t1 |
| Gene Sequence |
| Protein sequence |
