Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25222.t1 | XP_013450246.1 | 91.5 | 188 | 12 | 2 | 1 | 185 | 1 | 187 | 2.00E-83 | 318.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25222.t1 | W5X2N3 | 52.8 | 199 | 74 | 5 | 1 | 185 | 1 | 193 | 3.0e-48 | 193.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25222.t1 | I3SRQ1 | 91.5 | 188 | 12 | 2 | 1 | 185 | 1 | 187 | 1.4e-83 | 318.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059788 | MS.gene25222 | 0.822013 | 2.97E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25222.t1 | MTR_7g106660 | 93.085 | 188 | 9 | 2 | 1 | 185 | 1 | 187 | 2.70e-126 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25222.t1 | AT2G35900 | 46.078 | 204 | 79 | 7 | 1 | 185 | 1 | 192 | 8.72e-53 | 167 |
| MS.gene25222.t1 | AT2G35900 | 41.353 | 133 | 61 | 5 | 59 | 185 | 26 | 147 | 1.57e-23 | 91.3 |
| MS.gene25222.t1 | AT2G35900 | 41.353 | 133 | 61 | 5 | 59 | 185 | 26 | 147 | 1.57e-23 | 91.3 |
Find 48 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCCGTATCCTTGGATTT+AGG | 0.265695 | 7.3:+7500810 | None:intergenic |
| CGCAACCTCTTCGGTGGTCT+CGG | 0.314056 | 7.3:-7500972 | MS.gene25222:CDS |
| CTGAGATTTCACGACTTTCC+TGG | 0.320318 | 7.3:+7502544 | None:intergenic |
| GATAACAACAACTCTTCTTC+AGG | 0.370020 | 7.3:-7502587 | MS.gene25222:CDS |
| CTAAGAAAATGGGTTGGGTT+TGG | 0.371297 | 7.3:-7502619 | None:intergenic |
| GGGATACCTATTGAAGATAA+TGG | 0.379651 | 7.3:-7500849 | MS.gene25222:CDS |
| AGAGGAGGGTCTGCCACATT+TGG | 0.396459 | 7.3:-7501068 | MS.gene25222:CDS |
| ATTTAGGATGAGTTTCTTGC+CGG | 0.398851 | 7.3:+7500826 | None:intergenic |
| TTTGATTGCAGCACTTCAAC+AGG | 0.402118 | 7.3:+7501131 | None:intergenic |
| AGTTTGCAATAACATCAAAA+AGG | 0.435162 | 7.3:+7500913 | None:intergenic |
| ATCAGCTGATTCCGTATCCT+TGG | 0.436734 | 7.3:+7500803 | None:intergenic |
| GGAAGCTAAGAAAATGGGTT+GGG | 0.440868 | 7.3:-7502624 | None:intergenic |
| GTCATGGAGCGCAACCTCTT+CGG | 0.456959 | 7.3:-7500981 | MS.gene25222:CDS |
| TGCCGGCCATTATCTTCAAT+AGG | 0.466167 | 7.3:+7500843 | None:intergenic |
| CATGGAATGTTCAACTTCCC+TGG | 0.467653 | 7.3:-7501023 | MS.gene25222:CDS |
| CATCTCTGCATCAAATATAG+AGG | 0.468284 | 7.3:+7500887 | None:intergenic |
| TTGAACCTGGAAAATTCATT+CGG | 0.473945 | 7.3:-7502505 | MS.gene25222:CDS |
| TAGGTATCCCTCGCCTCATA+CGG | 0.477154 | 7.3:+7500862 | None:intergenic |
| ATCACCAGTGAGGTACTTAG+AGG | 0.483893 | 7.3:-7501086 | MS.gene25222:CDS |
| TGATACTGATTTCTCTGCAT+TGG | 0.487086 | 7.3:-7500784 | MS.gene25222:CDS |
| ATGCAGAGATGCCCCGTATG+AGG | 0.495867 | 7.3:-7500875 | MS.gene25222:CDS |
| GAGCTTCTCAAAACTTGCGC+TGG | 0.511543 | 7.3:-7502464 | MS.gene25222:CDS |
| TCAATATCACTTCGTAGCCC+AGG | 0.516666 | 7.3:+7501005 | None:intergenic |
| TGGAAGCTAAGAAAATGGGT+TGG | 0.519769 | 7.3:-7502625 | None:intergenic |
| CCTGGTGGAGCATCGTTCAT+CGG | 0.520580 | 7.3:+7502562 | None:intergenic |
| CCGATGAACGATGCTCCACC+AGG | 0.527517 | 7.3:-7502562 | MS.gene25222:CDS |
| TCATCCTAAATCCAAGGATA+CGG | 0.528227 | 7.3:-7500814 | MS.gene25222:CDS |
| AGGTATCCCTCGCCTCATAC+GGG | 0.544190 | 7.3:+7500863 | None:intergenic |
| CCCTCCTCTAAGTACCTCAC+TGG | 0.550025 | 7.3:+7501082 | None:intergenic |
| ATGGAATGTTCAACTTCCCT+GGG | 0.553660 | 7.3:-7501022 | MS.gene25222:CDS |
| CAGGGAAGTTGAACATTCCA+TGG | 0.558704 | 7.3:+7501024 | None:intergenic |
| ACGAAGTGATATTGAAGTCA+TGG | 0.559482 | 7.3:-7500997 | MS.gene25222:CDS |
| TACCTATTGAAGATAATGGC+CGG | 0.564553 | 7.3:-7500845 | MS.gene25222:CDS |
| AGAAACTCATCCTAAATCCA+AGG | 0.596218 | 7.3:-7500820 | MS.gene25222:CDS |
| AGATGCCCCGTATGAGGCGA+GGG | 0.597898 | 7.3:-7500869 | MS.gene25222:CDS |
| AAAACCGAAGAAGTTGAACC+TGG | 0.597931 | 7.3:-7502518 | MS.gene25222:CDS |
| GAGATGCCCCGTATGAGGCG+AGG | 0.605612 | 7.3:-7500870 | MS.gene25222:CDS |
| CAATATCACTTCGTAGCCCA+GGG | 0.608807 | 7.3:+7501006 | None:intergenic |
| ACCAGTGAGGTACTTAGAGG+AGG | 0.611706 | 7.3:-7501083 | MS.gene25222:CDS |
| ATCTCTGCATCAAATATAGA+GGG | 0.614696 | 7.3:+7500888 | None:intergenic |
| ATGGAGCGCAACCTCTTCGG+TGG | 0.620855 | 7.3:-7500978 | MS.gene25222:CDS |
| CCAGTGAGGTACTTAGAGGA+GGG | 0.628488 | 7.3:-7501082 | MS.gene25222:CDS |
| AGATTTCACGACTTTCCTGG+TGG | 0.634477 | 7.3:+7502547 | None:intergenic |
| AGCGACCGAGACCACCGAAG+AGG | 0.648679 | 7.3:+7500967 | None:intergenic |
| GCAAATAGCTCATCAGACCA+TGG | 0.656602 | 7.3:-7501041 | MS.gene25222:CDS |
| GGTATCCCTCGCCTCATACG+GGG | 0.681041 | 7.3:+7500864 | None:intergenic |
| GCTATTTGCTGAGCCAAATG+TGG | 0.697929 | 7.3:+7501055 | None:intergenic |
| AGAAGAAGATATCACCAGTG+AGG | 0.746392 | 7.3:-7501096 | MS.gene25222:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTAATCAATTTTTTT+TGG | - | chr7.3:7501054-7501073 | MS.gene25222:CDS | 10.0% |
| !!! | TATTTTATTTATTAGGTATT+AGG | - | chr7.3:7501018-7501037 | MS.gene25222:CDS | 10.0% |
| !!! | TTCATACTATTTTATTTATT+AGG | - | chr7.3:7501011-7501030 | MS.gene25222:CDS | 10.0% |
| !! | AATAATAATAAAGAAGAAGA+AGG | + | chr7.3:7500961-7500980 | None:intergenic | 15.0% |
| !! | ATTCAAATTAAATCGTAAAA+AGG | + | chr7.3:7501365-7501384 | None:intergenic | 15.0% |
| !! | TATGATACTTTATATTTGAA+TGG | + | chr7.3:7501809-7501828 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGAATGATCATT+TGG | - | chr7.3:7501372-7501391 | MS.gene25222:intron | 15.0% |
| !!! | TATTGGTTGATTATATTTTT+TGG | - | chr7.3:7502097-7502116 | MS.gene25222:intron | 15.0% |
| !! | AAAATAGTATGAAGCAAATT+GGG | + | chr7.3:7501004-7501023 | None:intergenic | 20.0% |
| !! | ATTTATTAGGTATTAGGATT+AGG | - | chr7.3:7501024-7501043 | MS.gene25222:CDS | 20.0% |
| !! | TAAAATAGTATGAAGCAAAT+TGG | + | chr7.3:7501005-7501024 | None:intergenic | 20.0% |
| !! | TATAGTATAGGATGTTATAA+TGG | + | chr7.3:7501224-7501243 | None:intergenic | 20.0% |
| !! | TGAATATCAAGATAATTTGA+TGG | + | chr7.3:7502050-7502069 | None:intergenic | 20.0% |
| !!! | GATTTCAATTTTAGGTATTA+GGG | - | chr7.3:7501990-7502009 | MS.gene25222:intron | 20.0% |
| !!! | GTTCAATTGATTTCAATTTT+AGG | - | chr7.3:7501982-7502001 | MS.gene25222:intron | 20.0% |
| !!! | TAAAAGTTTTTGTGCTTTAT+TGG | - | chr7.3:7502080-7502099 | MS.gene25222:intron | 20.0% |
| !!! | TGATTTCAATTTTAGGTATT+AGG | - | chr7.3:7501989-7502008 | MS.gene25222:intron | 20.0% |
| ! | AAGTATCATAATATGACATG+TGG | - | chr7.3:7501819-7501838 | MS.gene25222:intron | 25.0% |
| ! | AGTTTGCAATAACATCAAAA+AGG | + | chr7.3:7502471-7502490 | None:intergenic | 25.0% |
| ! | ATTGAAATCAATTGCAGTAT+TGG | + | chr7.3:7501883-7501902 | None:intergenic | 25.0% |
| ! | GACTTCATAAAGTATAGTAT+AGG | + | chr7.3:7501236-7501255 | None:intergenic | 25.0% |
| ! | TATCTTGATGTTGATACAAA+TGG | - | chr7.3:7501960-7501979 | MS.gene25222:intron | 25.0% |
| ! | TCTAATTTCATCTTTACCTT+TGG | - | chr7.3:7502214-7502233 | MS.gene25222:intron | 25.0% |
| !! | AAACATTGTCAATTTTGTCT+TGG | + | chr7.3:7501477-7501496 | None:intergenic | 25.0% |
| !!! | TTAGTGACTTGTTTTGTATA+GGG | - | chr7.3:7501712-7501731 | MS.gene25222:intron | 25.0% |
| !!! | TTTAGTGACTTGTTTTGTAT+AGG | - | chr7.3:7501711-7501730 | MS.gene25222:intron | 25.0% |
| !!! | TTTTTGGTCATTATGTTCTT+CGG | - | chr7.3:7502113-7502132 | MS.gene25222:intron | 25.0% |
| AAATATGCTAAAACCACCAA+AGG | - | chr7.3:7501310-7501329 | MS.gene25222:intron | 30.0% | |
| AAGCAAATTGGGAATAGAAT+AGG | + | chr7.3:7500993-7501012 | None:intergenic | 30.0% | |
| ACTTTACCTGAAAAGAACAT+TGG | - | chr7.3:7501559-7501578 | MS.gene25222:intron | 30.0% | |
| AGCAAATTGGGAATAGAATA+GGG | + | chr7.3:7500992-7501011 | None:intergenic | 30.0% | |
| ATCTCTGCATCAAATATAGA+GGG | + | chr7.3:7502496-7502515 | None:intergenic | 30.0% | |
| GAATGATCATTTGGATCAAT+TGG | - | chr7.3:7501381-7501400 | MS.gene25222:intron | 30.0% | |
| TATACTTTATGAAGTCTCTG+AGG | - | chr7.3:7501240-7501259 | MS.gene25222:intron | 30.0% | |
| TCAACATCAAGATACTTTGA+TGG | + | chr7.3:7501954-7501973 | None:intergenic | 30.0% | |
| TCATTTGGATCAATTGGAAA+TGG | - | chr7.3:7501387-7501406 | MS.gene25222:intron | 30.0% | |
| TTGAACCTGGAAAATTCATT+CGG | - | chr7.3:7500876-7500895 | MS.gene25222:CDS | 30.0% | |
| TTTCGAAAATCAGGTTTCTT+GGG | + | chr7.3:7501689-7501708 | None:intergenic | 30.0% | |
| ! | ATTGTACCAATGTTCTTTTC+AGG | + | chr7.3:7501568-7501587 | None:intergenic | 30.0% |
| ! | TTTTGGTCATTATGTTCTTC+GGG | - | chr7.3:7502114-7502133 | MS.gene25222:intron | 30.0% |
| !! | TACAAATTTTAGCACACGTT+TGG | + | chr7.3:7501195-7501214 | None:intergenic | 30.0% |
| !! | TTTGTATAGGGTTGTTTTAC+AGG | - | chr7.3:7501724-7501743 | MS.gene25222:intron | 30.0% |
| AAACCACCAAAGGTTTCATT+TGG | - | chr7.3:7501320-7501339 | MS.gene25222:intron | 35.0% | |
| ACGAAGTGATATTGAAGTCA+TGG | - | chr7.3:7502384-7502403 | MS.gene25222:intron | 35.0% | |
| AGAAACTCATCCTAAATCCA+AGG | - | chr7.3:7502561-7502580 | MS.gene25222:CDS | 35.0% | |
| AGCATTAAGGATCAGAAAGT+CGG | + | chr7.3:7501449-7501468 | None:intergenic | 35.0% | |
| AGGTATTAGGATTAGGATGA+TGG | - | chr7.3:7501031-7501050 | MS.gene25222:CDS | 35.0% | |
| CACTAAAGCTTTCGAAAATC+AGG | + | chr7.3:7501698-7501717 | None:intergenic | 35.0% | |
| CATCTCTGCATCAAATATAG+AGG | + | chr7.3:7502497-7502516 | None:intergenic | 35.0% | |
| CTTTCGAAAATCAGGTTTCT+TGG | + | chr7.3:7501690-7501709 | None:intergenic | 35.0% | |
| GATAACAACAACTCTTCTTC+AGG | - | chr7.3:7500794-7500813 | MS.gene25222:CDS | 35.0% | |
| GCAGCTGAAGAAATGAAAAA+TGG | - | chr7.3:7502445-7502464 | MS.gene25222:intron | 35.0% | |
| GGGATACCTATTGAAGATAA+TGG | - | chr7.3:7502532-7502551 | MS.gene25222:CDS | 35.0% | |
| GGTATTAGGATTAGGATGAT+GGG | - | chr7.3:7501032-7501051 | MS.gene25222:CDS | 35.0% | |
| GTTCTATTTGTGTAGTGTGT+GGG | - | chr7.3:7501847-7501866 | MS.gene25222:intron | 35.0% | |
| TCATCCTAAATCCAAGGATA+CGG | - | chr7.3:7502567-7502586 | MS.gene25222:CDS | 35.0% | |
| TGATGAAACAGGTACACAAA+AGG | + | chr7.3:7502164-7502183 | None:intergenic | 35.0% | |
| TGTTCTATTTGTGTAGTGTG+TGG | - | chr7.3:7501846-7501865 | MS.gene25222:intron | 35.0% | |
| TTACCTTTGGACTAATTCTC+AGG | - | chr7.3:7502227-7502246 | MS.gene25222:intron | 35.0% | |
| ! | ATTTAGGATGAGTTTCTTGC+CGG | + | chr7.3:7502558-7502577 | None:intergenic | 35.0% |
| ! | ATTTTATTCTGCCAAACCGA+TGG | - | chr7.3:7501164-7501183 | MS.gene25222:intron | 35.0% |
| ! | CATTTCCGAATGAATTTTCC+AGG | + | chr7.3:7500884-7500903 | None:intergenic | 35.0% |
| ! | TACCTATTGAAGATAATGGC+CGG | - | chr7.3:7502536-7502555 | MS.gene25222:CDS | 35.0% |
| ! | TGATTTTGCAAAAGCTACAC+AGG | + | chr7.3:7501141-7501160 | None:intergenic | 35.0% |
| ! | TTTTCCAGGTTCAACTTCTT+CGG | + | chr7.3:7500870-7500889 | None:intergenic | 35.0% |
| !! | AAATCAATTGCAGTATTGGC+AGG | + | chr7.3:7501879-7501898 | None:intergenic | 35.0% |
| !! | TGATACTGATTTCTCTGCAT+TGG | - | chr7.3:7502597-7502616 | MS.gene25222:CDS | 35.0% |
| AAAACCGAAGAAGTTGAACC+TGG | - | chr7.3:7500863-7500882 | MS.gene25222:CDS | 40.0% | |
| AGAAGAAGATATCACCAGTG+AGG | - | chr7.3:7502285-7502304 | MS.gene25222:intron | 40.0% | |
| ATCGCTCCAAATGAAACCTT+TGG | + | chr7.3:7501329-7501348 | None:intergenic | 40.0% | |
| ATGGAATGTTCAACTTCCCT+GGG | - | chr7.3:7502359-7502378 | MS.gene25222:intron | 40.0% | |
| GATTCCGTATCCTTGGATTT+AGG | + | chr7.3:7502574-7502593 | None:intergenic | 40.0% | |
| TAGGTATTAGGGTTATGCAC+AGG | - | chr7.3:7502001-7502020 | MS.gene25222:intron | 40.0% | |
| TTTGATTGCAGCACTTCAAC+AGG | + | chr7.3:7502253-7502272 | None:intergenic | 40.0% | |
| ! | TGTCTTGGCATAGAGCATTA+AGG | + | chr7.3:7501462-7501481 | None:intergenic | 40.0% |
| !! | GGTTGTTTTACAGGCTTTGA+AGG | - | chr7.3:7501733-7501752 | MS.gene25222:intron | 40.0% |
| AGATTTCACGACTTTCCTGG+TGG | + | chr7.3:7500837-7500856 | None:intergenic | 45.0% | |
| AGGCCTGAGAATTAGTCCAA+AGG | + | chr7.3:7502233-7502252 | None:intergenic | 45.0% | |
| CAATATCACTTCGTAGCCCA+GGG | + | chr7.3:7502378-7502397 | None:intergenic | 45.0% | |
| CACTTGTGCATGTACATGTG+TGG | - | chr7.3:7501628-7501647 | MS.gene25222:intron | 45.0% | |
| CAGGGAAGTTGAACATTCCA+TGG | + | chr7.3:7502360-7502379 | None:intergenic | 45.0% | |
| CATGGAATGTTCAACTTCCC+TGG | - | chr7.3:7502358-7502377 | MS.gene25222:intron | 45.0% | |
| CATGTACATGCACAAGTGAC+AGG | + | chr7.3:7501626-7501645 | None:intergenic | 45.0% | |
| CTGAGATTTCACGACTTTCC+TGG | + | chr7.3:7500840-7500859 | None:intergenic | 45.0% | |
| GCAAATAGCTCATCAGACCA+TGG | - | chr7.3:7502340-7502359 | MS.gene25222:intron | 45.0% | |
| GCAACATAGCAGGAAGAGAA+TGG | - | chr7.3:7501598-7501617 | MS.gene25222:intron | 45.0% | |
| GCTCCAAATGAAACCTTTGG+TGG | + | chr7.3:7501326-7501345 | None:intergenic | 45.0% | |
| TCAATATCACTTCGTAGCCC+AGG | + | chr7.3:7502379-7502398 | None:intergenic | 45.0% | |
| TGCCGGCCATTATCTTCAAT+AGG | + | chr7.3:7502541-7502560 | None:intergenic | 45.0% | |
| ! | ATCACCAGTGAGGTACTTAG+AGG | - | chr7.3:7502295-7502314 | MS.gene25222:intron | 45.0% |
| ! | ATCAGCTGATTCCGTATCCT+TGG | + | chr7.3:7502581-7502600 | None:intergenic | 45.0% |
| ! | GATGGAGCACTTCCAAAAAG+TGG | + | chr7.3:7501936-7501955 | None:intergenic | 45.0% |
| ! | GCTATTTGCTGAGCCAAATG+TGG | + | chr7.3:7502329-7502348 | None:intergenic | 45.0% |
| ! | GTTGTCGTTTGCAACATAGC+AGG | - | chr7.3:7501588-7501607 | MS.gene25222:intron | 45.0% |
| !! | CACACGTTTGGATTAGCCAT+CGG | + | chr7.3:7501183-7501202 | None:intergenic | 45.0% |
| !! | GCACAAGTAGCACCACTTTT+TGG | - | chr7.3:7501921-7501940 | MS.gene25222:intron | 45.0% |
| !! | GTTTGGATTAGCCATCGGTT+TGG | + | chr7.3:7501178-7501197 | None:intergenic | 45.0% |
| GAGCTTCTCAAAACTTGCGC+TGG | - | chr7.3:7500917-7500936 | MS.gene25222:CDS | 50.0% | |
| TAGGTATCCCTCGCCTCATA+CGG | + | chr7.3:7502522-7502541 | None:intergenic | 50.0% | |
| TCCAGTCGCATTTGCAGAGA+GGG | + | chr7.3:7502191-7502210 | None:intergenic | 50.0% | |
| TTCCAGTCGCATTTGCAGAG+AGG | + | chr7.3:7502192-7502211 | None:intergenic | 50.0% | |
| ! | ACCAGTGAGGTACTTAGAGG+AGG | - | chr7.3:7502298-7502317 | MS.gene25222:intron | 50.0% |
| ! | CCAGTGAGGTACTTAGAGGA+GGG | - | chr7.3:7502299-7502318 | MS.gene25222:intron | 50.0% |
| ACCCTCTCTGCAAATGCGAC+TGG | - | chr7.3:7502187-7502206 | MS.gene25222:intron | 55.0% | |
| AGAGGAGGGTCTGCCACATT+TGG | - | chr7.3:7502313-7502332 | MS.gene25222:intron | 55.0% | |
| AGGTATCCCTCGCCTCATAC+GGG | + | chr7.3:7502521-7502540 | None:intergenic | 55.0% | |
| AGTCGCATTTGCAGAGAGGG+TGG | + | chr7.3:7502188-7502207 | None:intergenic | 55.0% | |
| ATGCAGAGATGCCCCGTATG+AGG | - | chr7.3:7502506-7502525 | MS.gene25222:CDS | 55.0% | |
| CCCTCCTCTAAGTACCTCAC+TGG | + | chr7.3:7502302-7502321 | None:intergenic | 55.0% | |
| GAGAGGGTGGGTGATGAAAC+AGG | + | chr7.3:7502175-7502194 | None:intergenic | 55.0% | |
| GTCATGGAGCGCAACCTCTT+CGG | - | chr7.3:7502400-7502419 | MS.gene25222:intron | 55.0% | |
| GTCGCATTTGCAGAGAGGGT+GGG | + | chr7.3:7502187-7502206 | None:intergenic | 55.0% | |
| ! | TCAGTGAGTGTCGCTGCATG+TGG | + | chr7.3:7501773-7501792 | None:intergenic | 55.0% |
| !! | CCTGGTGGAGCATCGTTCAT+CGG | + | chr7.3:7500822-7500841 | None:intergenic | 55.0% |
| AGATGCCCCGTATGAGGCGA+GGG | - | chr7.3:7502512-7502531 | MS.gene25222:CDS | 60.0% | |
| ATGGAGCGCAACCTCTTCGG+TGG | - | chr7.3:7502403-7502422 | MS.gene25222:intron | 60.0% | |
| CCGATGAACGATGCTCCACC+AGG | - | chr7.3:7500819-7500838 | MS.gene25222:CDS | 60.0% | |
| CGCAACCTCTTCGGTGGTCT+CGG | - | chr7.3:7502409-7502428 | MS.gene25222:intron | 60.0% | |
| GGTATCCCTCGCCTCATACG+GGG | + | chr7.3:7502520-7502539 | None:intergenic | 60.0% | |
| AGCGACCGAGACCACCGAAG+AGG | + | chr7.3:7502417-7502436 | None:intergenic | 65.0% | |
| GAGATGCCCCGTATGAGGCG+AGG | - | chr7.3:7502511-7502530 | MS.gene25222:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 7500770 | 7502633 | 7500770 | ID=MS.gene25222 |
| chr7.3 | mRNA | 7500770 | 7502633 | 7500770 | ID=MS.gene25222.t1;Parent=MS.gene25222 |
| chr7.3 | exon | 7502461 | 7502633 | 7502461 | ID=MS.gene25222.t1.exon1;Parent=MS.gene25222.t1 |
| chr7.3 | CDS | 7502461 | 7502633 | 7502461 | ID=cds.MS.gene25222.t1;Parent=MS.gene25222.t1 |
| chr7.3 | exon | 7500770 | 7501154 | 7500770 | ID=MS.gene25222.t1.exon2;Parent=MS.gene25222.t1 |
| chr7.3 | CDS | 7500770 | 7501154 | 7500770 | ID=cds.MS.gene25222.t1;Parent=MS.gene25222.t1 |
| Gene Sequence |
| Protein sequence |
