Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059788.t1 | XP_013464675.1 | 95.3 | 487 | 17 | 1 | 1 | 487 | 1 | 481 | 2.10E-257 | 897.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059788.t1 | Q9LUH2 | 61.6 | 471 | 176 | 2 | 10 | 476 | 6 | 475 | 2.0e-160 | 567.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059788.t1 | A0A072VKN0 | 95.3 | 487 | 17 | 1 | 1 | 487 | 1 | 481 | 1.5e-257 | 897.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052077 | MS.gene059788 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene059788 | 0.818457 | 1.94E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene059788 | 0.835715 | 1.43E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene059788 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene059788 | 0.811728 | 6.06E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene059788 | 0.828792 | 7.38E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene06260 | 0.825457 | 4.64E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene063906 | 0.82695 | 2.05E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene065846 | 0.80795 | 3.94E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene067925 | 0.822451 | 2.35E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene068128 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene068723 | 0.984688 | 2.72E-161 | -1.69E-46 |
| MS.gene059788 | MS.gene069266 | 0.8004 | 1.47E-48 | -1.69E-46 |
| MS.gene059788 | MS.gene070266 | 0.830973 | 2.17E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene070790 | 0.82182 | 3.30E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene070968 | 0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene072070 | 0.811654 | 6.28E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene073295 | 0.823849 | 1.11E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene073427 | 0.83662 | 8.41E-57 | -1.69E-46 |
| MS.gene059788 | MS.gene073486 | 0.840663 | 7.59E-58 | -1.69E-46 |
| MS.gene059788 | MS.gene073579 | 0.806443 | 8.21E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene08083 | 0.814514 | 1.48E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene08779 | 0.858752 | 6.64E-63 | -1.69E-46 |
| MS.gene059788 | MS.gene08906 | 0.818619 | 1.78E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene08908 | 0.818662 | 1.74E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene09310 | 0.853232 | 2.74E-61 | -1.69E-46 |
| MS.gene059788 | MS.gene09558 | 0.831085 | 2.04E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene20096 | 0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene20340 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene23088 | 0.80267 | 5.03E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene23318 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene24158 | 0.814939 | 1.19E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene24193 | 0.827411 | 1.59E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene24637 | 0.827392 | 1.60E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene25222 | 0.822013 | 2.97E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene25223 | 0.828016 | 1.14E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene26111 | 0.820416 | 6.94E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene26654 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene28693 | 0.813905 | 2.02E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene28694 | 0.826555 | 2.54E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene31035 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene31671 | 0.81784 | 2.68E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene32713 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene33843 | 0.825711 | 4.04E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene34187 | 0.831405 | 1.70E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene34188 | 0.825098 | 5.64E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene34190 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene34191 | 0.851265 | 9.93E-61 | -1.69E-46 |
| MS.gene059788 | MS.gene34389 | 0.807845 | 4.14E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene34391 | 0.81995 | 8.87E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene34394 | 0.808943 | 2.42E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene34496 | 0.811916 | 5.51E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene35523 | 0.80817 | 3.53E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene36260 | 0.80434 | 2.26E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene36507 | 0.840027 | 1.11E-57 | -1.69E-46 |
| MS.gene059788 | MS.gene37681 | 0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene37698 | 0.832002 | 1.21E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene40169 | 0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene41435 | 0.812378 | 4.37E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene41649 | 0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene43782 | 0.830299 | 3.17E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene44868 | 0.824712 | 6.96E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene44876 | 0.804223 | 2.40E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene45171 | 0.815086 | 1.11E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene45727 | 0.828698 | 7.78E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene47653 | 0.848156 | 7.34E-60 | -1.69E-46 |
| MS.gene059788 | MS.gene48030 | 0.802289 | 6.02E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene48312 | 0.809209 | 2.12E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene49116 | 0.819139 | 1.36E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene50741 | 0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene51067 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene51552 | 0.802578 | 5.25E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene55342 | 0.807544 | 4.80E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene56177 | 0.817661 | 2.94E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene56204 | 0.800259 | 1.57E-48 | -1.69E-46 |
| MS.gene059788 | MS.gene56870 | 0.818359 | 2.04E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene57720 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene059788 | MS.gene58570 | 0.829244 | 5.74E-55 | -1.69E-46 |
| MS.gene059788 | MS.gene58652 | 0.849772 | 2.61E-60 | -1.69E-46 |
| MS.gene059788 | MS.gene58789 | 0.84635 | 2.29E-59 | -1.69E-46 |
| MS.gene059788 | MS.gene59149 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene59760 | 0.826827 | 2.19E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene59980 | 0.803378 | 3.59E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene60124 | 0.816415 | 5.60E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene60271 | 0.826211 | 3.07E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene62091 | 0.825357 | 4.90E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene63882 | 0.842012 | 3.35E-58 | -1.69E-46 |
| MS.gene059788 | MS.gene63983 | 0.852495 | 4.45E-61 | -1.69E-46 |
| MS.gene059788 | MS.gene64188 | 0.80806 | 3.73E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene64466 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene64994 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene66292 | 0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene059788 | MS.gene70860 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene72142 | 0.82124 | 4.48E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene73269 | 0.839855 | 1.23E-57 | -1.69E-46 |
| MS.gene059788 | MS.gene75493 | 0.846116 | 2.66E-59 | -1.69E-46 |
| MS.gene059788 | MS.gene75614 | 0.814592 | 1.42E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene78667 | 0.811124 | 8.19E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene79020 | 0.859692 | 3.47E-63 | -1.69E-46 |
| MS.gene059788 | MS.gene79479 | 0.838393 | 2.95E-57 | -1.69E-46 |
| MS.gene059788 | MS.gene81388 | 0.839697 | 1.36E-57 | -1.69E-46 |
| MS.gene059788 | MS.gene81687 | 0.803011 | 4.27E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene81859 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene82939 | 0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene059788 | MS.gene84159 | 0.806311 | 8.75E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene84200 | 0.80233 | 5.91E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene85860 | 0.806417 | 8.31E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene86095 | 0.808022 | 3.80E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene88768 | 0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene89074 | 0.813915 | 2.01E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene94150 | 0.804145 | 2.49E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene98216 | 0.800959 | 1.13E-48 | -1.69E-46 |
| MS.gene059788 | MS.gene98521 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene98609 | 0.814542 | 1.46E-51 | -1.69E-46 |
| MS.gene059788 | MS.gene99466 | 0.881333 | 2.62E-70 | -1.69E-46 |
| MS.gene059788 | MS.gene99877 | 0.815332 | 9.76E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059788.t1 | MTR_2g078960 | 95.277 | 487 | 17 | 1 | 1 | 487 | 1 | 481 | 0.0 | 934 |
| MS.gene059788.t1 | MTR_2g078930 | 88.798 | 491 | 51 | 2 | 1 | 487 | 1 | 491 | 0.0 | 859 |
| MS.gene059788.t1 | MTR_2g079020 | 86.066 | 488 | 64 | 2 | 1 | 487 | 1 | 485 | 0.0 | 821 |
| MS.gene059788.t1 | MTR_2g078970 | 81.967 | 488 | 78 | 2 | 1 | 487 | 1 | 479 | 0.0 | 781 |
| MS.gene059788.t1 | MTR_2g078990 | 83.766 | 308 | 50 | 0 | 180 | 487 | 1 | 308 | 0.0 | 537 |
| MS.gene059788.t1 | MTR_2g079030 | 85.714 | 210 | 30 | 0 | 278 | 487 | 319 | 528 | 9.20e-130 | 387 |
| MS.gene059788.t1 | MTR_6g081780 | 42.733 | 461 | 248 | 4 | 18 | 472 | 10 | 460 | 3.28e-126 | 376 |
| MS.gene059788.t1 | MTR_1g108810 | 41.775 | 462 | 268 | 1 | 11 | 472 | 7 | 467 | 3.65e-126 | 376 |
| MS.gene059788.t1 | MTR_6g081410 | 41.983 | 474 | 252 | 6 | 18 | 483 | 10 | 468 | 5.37e-125 | 373 |
| MS.gene059788.t1 | MTR_8g106670 | 42.105 | 437 | 253 | 0 | 36 | 472 | 9 | 445 | 9.75e-121 | 362 |
| MS.gene059788.t1 | MTR_6g081240 | 42.431 | 436 | 249 | 2 | 38 | 472 | 9 | 443 | 3.17e-116 | 349 |
| MS.gene059788.t1 | MTR_1g108840 | 41.228 | 456 | 266 | 1 | 18 | 473 | 22 | 475 | 3.72e-115 | 348 |
| MS.gene059788.t1 | MTR_6g081400 | 39.013 | 446 | 268 | 2 | 39 | 483 | 15 | 457 | 4.66e-113 | 342 |
| MS.gene059788.t1 | MTR_6g081300 | 40.920 | 435 | 257 | 0 | 38 | 472 | 9 | 443 | 4.73e-112 | 339 |
| MS.gene059788.t1 | MTR_6g081810 | 38.266 | 473 | 258 | 3 | 11 | 483 | 4 | 442 | 1.08e-110 | 335 |
| MS.gene059788.t1 | MTR_6g066380 | 38.994 | 477 | 277 | 4 | 11 | 483 | 4 | 470 | 2.88e-109 | 333 |
| MS.gene059788.t1 | MTR_6g081390 | 38.789 | 446 | 269 | 2 | 39 | 483 | 12 | 454 | 1.64e-108 | 330 |
| MS.gene059788.t1 | MTR_4g048000 | 36.688 | 477 | 295 | 1 | 7 | 483 | 39 | 508 | 1.78e-104 | 322 |
| MS.gene059788.t1 | MTR_7g082810 | 38.717 | 452 | 277 | 0 | 21 | 472 | 2 | 453 | 2.31e-104 | 320 |
| MS.gene059788.t1 | MTR_6g081310 | 39.821 | 447 | 243 | 3 | 38 | 472 | 9 | 441 | 6.54e-103 | 316 |
| MS.gene059788.t1 | MTR_6g004220 | 38.022 | 455 | 279 | 2 | 21 | 472 | 3 | 457 | 1.09e-100 | 310 |
| MS.gene059788.t1 | MTR_6g004220 | 37.609 | 460 | 284 | 2 | 16 | 472 | 5 | 464 | 1.66e-100 | 311 |
| MS.gene059788.t1 | MTR_2g088400 | 34.064 | 502 | 309 | 2 | 3 | 482 | 2 | 503 | 4.84e-100 | 310 |
| MS.gene059788.t1 | MTR_1g108990 | 37.229 | 462 | 285 | 2 | 11 | 472 | 2 | 458 | 1.38e-96 | 300 |
| MS.gene059788.t1 | MTR_2g022980 | 34.286 | 490 | 305 | 3 | 8 | 483 | 6 | 492 | 3.97e-95 | 296 |
| MS.gene059788.t1 | MTR_2g088400 | 34.348 | 460 | 288 | 1 | 3 | 448 | 2 | 461 | 1.99e-92 | 288 |
| MS.gene059788.t1 | MTR_1g109060 | 36.446 | 439 | 269 | 2 | 39 | 472 | 24 | 457 | 2.41e-89 | 281 |
| MS.gene059788.t1 | MTR_1g109060 | 36.446 | 439 | 269 | 2 | 39 | 472 | 24 | 457 | 4.52e-89 | 281 |
| MS.gene059788.t1 | MTR_5g090290 | 35.874 | 446 | 285 | 1 | 25 | 470 | 33 | 477 | 1.76e-86 | 276 |
| MS.gene059788.t1 | MTR_7g082800 | 35.990 | 389 | 248 | 1 | 98 | 485 | 1 | 389 | 3.64e-82 | 260 |
| MS.gene059788.t1 | MTR_8g069470 | 34.023 | 435 | 286 | 1 | 38 | 472 | 49 | 482 | 3.45e-81 | 261 |
| MS.gene059788.t1 | MTR_8g063590 | 36.092 | 435 | 275 | 3 | 40 | 472 | 54 | 487 | 8.48e-81 | 260 |
| MS.gene059788.t1 | MTR_5g032720 | 33.888 | 481 | 304 | 5 | 10 | 483 | 13 | 486 | 1.10e-80 | 259 |
| MS.gene059788.t1 | MTR_1g101500 | 32.979 | 470 | 308 | 3 | 13 | 479 | 39 | 504 | 1.49e-80 | 260 |
| MS.gene059788.t1 | MTR_7g087400 | 37.868 | 441 | 258 | 4 | 39 | 472 | 30 | 461 | 3.44e-80 | 258 |
| MS.gene059788.t1 | MTR_6g004220 | 36.896 | 393 | 245 | 2 | 16 | 405 | 5 | 397 | 9.83e-80 | 255 |
| MS.gene059788.t1 | MTR_1g100180 | 35.828 | 441 | 278 | 3 | 33 | 472 | 38 | 474 | 1.30e-79 | 256 |
| MS.gene059788.t1 | MTR_5g033100 | 33.408 | 446 | 295 | 2 | 38 | 482 | 55 | 499 | 2.44e-78 | 254 |
| MS.gene059788.t1 | MTR_1g021740 | 32.766 | 470 | 309 | 3 | 3 | 472 | 5 | 467 | 1.28e-75 | 246 |
| MS.gene059788.t1 | MTR_5g010830 | 34.023 | 435 | 280 | 3 | 36 | 466 | 62 | 493 | 3.88e-75 | 246 |
| MS.gene059788.t1 | MTR_7g087410 | 34.793 | 434 | 282 | 1 | 39 | 472 | 31 | 463 | 6.36e-75 | 244 |
| MS.gene059788.t1 | MTR_5g087930 | 32.591 | 494 | 272 | 8 | 3 | 485 | 19 | 462 | 1.20e-73 | 240 |
| MS.gene059788.t1 | MTR_5g067460 | 31.070 | 486 | 312 | 6 | 15 | 485 | 35 | 512 | 5.78e-73 | 241 |
| MS.gene059788.t1 | MTR_0039s0080 | 31.250 | 448 | 295 | 3 | 48 | 485 | 47 | 491 | 1.74e-71 | 236 |
| MS.gene059788.t1 | MTR_6g047640 | 33.830 | 470 | 294 | 4 | 11 | 472 | 2 | 462 | 6.03e-71 | 233 |
| MS.gene059788.t1 | MTR_6g047610 | 32.759 | 464 | 306 | 4 | 11 | 472 | 2 | 461 | 1.22e-70 | 233 |
| MS.gene059788.t1 | MTR_5g032750 | 33.833 | 467 | 295 | 7 | 10 | 472 | 13 | 469 | 1.88e-70 | 232 |
| MS.gene059788.t1 | MTR_7g087370 | 34.934 | 458 | 252 | 6 | 22 | 472 | 14 | 432 | 2.62e-70 | 231 |
| MS.gene059788.t1 | MTR_7g087430 | 37.333 | 375 | 234 | 1 | 98 | 472 | 1 | 374 | 1.97e-69 | 227 |
| MS.gene059788.t1 | MTR_6g047640 | 32.553 | 470 | 281 | 5 | 11 | 472 | 2 | 443 | 2.66e-69 | 229 |
| MS.gene059788.t1 | MTR_7g087410 | 36.267 | 375 | 238 | 1 | 98 | 472 | 1 | 374 | 3.29e-68 | 224 |
| MS.gene059788.t1 | MTR_8g102430 | 32.604 | 457 | 279 | 5 | 15 | 470 | 6 | 434 | 6.47e-68 | 224 |
| MS.gene059788.t1 | MTR_6g027200 | 32.874 | 435 | 289 | 2 | 39 | 472 | 36 | 468 | 1.08e-67 | 225 |
| MS.gene059788.t1 | MTR_3g099700 | 32.009 | 453 | 305 | 3 | 21 | 472 | 29 | 479 | 1.82e-66 | 222 |
| MS.gene059788.t1 | MTR_3g111020 | 30.357 | 448 | 302 | 4 | 10 | 451 | 20 | 463 | 3.18e-66 | 223 |
| MS.gene059788.t1 | MTR_3g099720 | 30.917 | 469 | 311 | 3 | 21 | 483 | 29 | 490 | 3.37e-66 | 221 |
| MS.gene059788.t1 | MTR_6g047590 | 33.405 | 464 | 303 | 4 | 11 | 472 | 2 | 461 | 1.04e-64 | 217 |
| MS.gene059788.t1 | MTR_6g088805 | 30.983 | 468 | 298 | 6 | 18 | 472 | 2 | 457 | 3.97e-64 | 216 |
| MS.gene059788.t1 | MTR_6g004220 | 37.179 | 312 | 193 | 2 | 16 | 324 | 5 | 316 | 9.51e-64 | 210 |
| MS.gene059788.t1 | MTR_6g043810 | 30.837 | 454 | 299 | 4 | 38 | 479 | 22 | 472 | 9.66e-64 | 215 |
| MS.gene059788.t1 | MTR_6g043810 | 30.853 | 457 | 295 | 6 | 38 | 479 | 32 | 482 | 1.30e-63 | 215 |
| MS.gene059788.t1 | MTR_6g027190 | 33.103 | 435 | 288 | 2 | 39 | 472 | 24 | 456 | 1.43e-60 | 206 |
| MS.gene059788.t1 | MTR_5g011540 | 30.388 | 464 | 304 | 4 | 34 | 484 | 38 | 495 | 2.48e-60 | 206 |
| MS.gene059788.t1 | MTR_4g027920 | 30.806 | 422 | 284 | 4 | 39 | 455 | 156 | 574 | 1.93e-59 | 206 |
| MS.gene059788.t1 | MTR_4g051552 | 74.545 | 110 | 21 | 3 | 187 | 295 | 191 | 294 | 2.21e-48 | 169 |
| MS.gene059788.t1 | MTR_2g435930 | 24.729 | 461 | 325 | 2 | 38 | 479 | 18 | 475 | 1.85e-40 | 152 |
| MS.gene059788.t1 | MTR_5g090280 | 28.678 | 401 | 250 | 5 | 98 | 470 | 1 | 393 | 5.82e-39 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059788.t1 | AT3G23560 | 61.359 | 471 | 179 | 1 | 9 | 476 | 5 | 475 | 0.0 | 594 |
| MS.gene059788.t1 | AT3G23550 | 61.255 | 462 | 179 | 0 | 13 | 474 | 4 | 465 | 0.0 | 585 |
| MS.gene059788.t1 | AT3G23560 | 61.000 | 400 | 153 | 1 | 9 | 405 | 5 | 404 | 3.55e-175 | 498 |
| MS.gene059788.t1 | AT5G52450 | 44.470 | 434 | 241 | 0 | 39 | 472 | 25 | 458 | 9.83e-117 | 352 |
| MS.gene059788.t1 | AT2G34360 | 42.291 | 454 | 246 | 4 | 20 | 472 | 15 | 453 | 1.67e-116 | 351 |
| MS.gene059788.t1 | AT1G73700 | 41.856 | 485 | 263 | 3 | 6 | 482 | 1 | 474 | 1.64e-114 | 346 |
| MS.gene059788.t1 | AT1G15150 | 39.565 | 460 | 272 | 3 | 17 | 470 | 2 | 461 | 7.94e-107 | 327 |
| MS.gene059788.t1 | AT2G04040 | 38.641 | 471 | 267 | 6 | 11 | 472 | 2 | 459 | 2.17e-103 | 317 |
| MS.gene059788.t1 | AT1G15160 | 38.166 | 469 | 284 | 3 | 17 | 479 | 2 | 470 | 2.00e-102 | 315 |
| MS.gene059788.t1 | AT1G15170 | 39.780 | 455 | 268 | 2 | 32 | 483 | 23 | 474 | 2.34e-102 | 315 |
| MS.gene059788.t1 | AT1G66760 | 37.446 | 462 | 282 | 1 | 11 | 472 | 6 | 460 | 4.64e-102 | 313 |
| MS.gene059788.t1 | AT1G66760 | 37.446 | 462 | 282 | 1 | 11 | 472 | 6 | 460 | 5.29e-102 | 314 |
| MS.gene059788.t1 | AT2G04070 | 37.660 | 470 | 273 | 5 | 11 | 472 | 2 | 459 | 2.70e-100 | 310 |
| MS.gene059788.t1 | AT2G04050 | 37.797 | 463 | 282 | 4 | 11 | 472 | 2 | 459 | 3.34e-98 | 304 |
| MS.gene059788.t1 | AT1G71140 | 37.802 | 455 | 270 | 4 | 23 | 472 | 12 | 458 | 3.57e-98 | 304 |
| MS.gene059788.t1 | AT1G11670 | 36.261 | 444 | 283 | 0 | 40 | 483 | 50 | 493 | 9.01e-98 | 304 |
| MS.gene059788.t1 | AT2G04080 | 35.714 | 476 | 297 | 5 | 11 | 485 | 2 | 469 | 3.22e-97 | 301 |
| MS.gene059788.t1 | AT2G04080 | 36.285 | 463 | 289 | 4 | 11 | 472 | 2 | 459 | 7.87e-97 | 300 |
| MS.gene059788.t1 | AT2G34360 | 37.528 | 453 | 227 | 2 | 20 | 472 | 15 | 411 | 1.32e-96 | 299 |
| MS.gene059788.t1 | AT2G04100 | 37.797 | 463 | 285 | 3 | 11 | 472 | 2 | 462 | 1.56e-96 | 300 |
| MS.gene059788.t1 | AT2G04100 | 38.065 | 465 | 281 | 4 | 11 | 472 | 2 | 462 | 1.87e-96 | 300 |
| MS.gene059788.t1 | AT3G21690 | 35.426 | 446 | 288 | 0 | 38 | 483 | 50 | 495 | 3.90e-95 | 297 |
| MS.gene059788.t1 | AT1G15180 | 39.765 | 425 | 253 | 1 | 32 | 453 | 24 | 448 | 1.62e-93 | 292 |
| MS.gene059788.t1 | AT1G61890 | 34.910 | 444 | 289 | 0 | 40 | 483 | 47 | 490 | 6.75e-93 | 291 |
| MS.gene059788.t1 | AT2G04090 | 36.853 | 464 | 288 | 4 | 11 | 472 | 2 | 462 | 2.44e-92 | 289 |
| MS.gene059788.t1 | AT1G61890 | 35.335 | 433 | 280 | 0 | 40 | 472 | 47 | 479 | 4.37e-92 | 289 |
| MS.gene059788.t1 | AT1G66780 | 35.697 | 423 | 271 | 1 | 59 | 481 | 54 | 475 | 6.01e-92 | 288 |
| MS.gene059788.t1 | AT4G21903 | 36.471 | 425 | 261 | 2 | 67 | 483 | 80 | 503 | 4.86e-90 | 284 |
| MS.gene059788.t1 | AT4G21903 | 37.192 | 406 | 254 | 1 | 67 | 472 | 80 | 484 | 1.77e-89 | 283 |
| MS.gene059788.t1 | AT4G21910 | 34.513 | 452 | 289 | 2 | 40 | 485 | 57 | 507 | 4.88e-89 | 281 |
| MS.gene059788.t1 | AT4G21910 | 34.513 | 452 | 289 | 2 | 40 | 485 | 57 | 507 | 4.88e-89 | 281 |
| MS.gene059788.t1 | AT3G59030 | 35.124 | 484 | 293 | 6 | 7 | 472 | 3 | 483 | 9.07e-89 | 281 |
| MS.gene059788.t1 | AT4G21910 | 34.071 | 452 | 291 | 2 | 40 | 485 | 55 | 505 | 3.45e-88 | 279 |
| MS.gene059788.t1 | AT4G21910 | 34.071 | 452 | 291 | 2 | 40 | 485 | 55 | 505 | 3.45e-88 | 279 |
| MS.gene059788.t1 | AT1G64820 | 33.703 | 451 | 290 | 3 | 36 | 483 | 25 | 469 | 1.88e-86 | 275 |
| MS.gene059788.t1 | AT1G47530 | 36.009 | 461 | 292 | 3 | 13 | 472 | 8 | 466 | 3.33e-85 | 271 |
| MS.gene059788.t1 | AT1G15170 | 40.517 | 348 | 204 | 1 | 136 | 483 | 11 | 355 | 6.19e-85 | 266 |
| MS.gene059788.t1 | AT1G61890 | 35.062 | 405 | 263 | 0 | 40 | 444 | 47 | 451 | 9.07e-84 | 266 |
| MS.gene059788.t1 | AT1G15150 | 41.493 | 335 | 196 | 0 | 136 | 470 | 11 | 345 | 1.18e-83 | 263 |
| MS.gene059788.t1 | AT1G23300 | 35.104 | 433 | 280 | 1 | 40 | 472 | 44 | 475 | 3.69e-83 | 266 |
| MS.gene059788.t1 | AT1G33110 | 35.808 | 458 | 286 | 4 | 16 | 472 | 17 | 467 | 7.79e-83 | 265 |
| MS.gene059788.t1 | AT4G21903 | 35.533 | 394 | 246 | 1 | 98 | 483 | 1 | 394 | 4.64e-82 | 259 |
| MS.gene059788.t1 | AT1G33090 | 36.518 | 471 | 291 | 4 | 17 | 486 | 18 | 481 | 6.49e-82 | 263 |
| MS.gene059788.t1 | AT1G33100 | 36.069 | 463 | 289 | 3 | 10 | 472 | 9 | 464 | 1.48e-81 | 261 |
| MS.gene059788.t1 | AT3G26590 | 33.941 | 439 | 278 | 4 | 50 | 482 | 55 | 487 | 5.99e-81 | 260 |
| MS.gene059788.t1 | AT1G66760 | 36.709 | 395 | 243 | 1 | 11 | 405 | 6 | 393 | 2.43e-80 | 255 |
| MS.gene059788.t1 | AT5G44050 | 34.672 | 473 | 298 | 5 | 3 | 472 | 8 | 472 | 5.80e-79 | 254 |
| MS.gene059788.t1 | AT1G12950 | 33.485 | 439 | 280 | 4 | 50 | 482 | 77 | 509 | 2.42e-78 | 254 |
| MS.gene059788.t1 | AT5G38030 | 32.952 | 437 | 291 | 2 | 34 | 470 | 40 | 474 | 2.29e-77 | 251 |
| MS.gene059788.t1 | AT1G47530 | 37.067 | 375 | 235 | 1 | 98 | 472 | 1 | 374 | 1.16e-75 | 243 |
| MS.gene059788.t1 | AT4G00350 | 34.199 | 462 | 296 | 4 | 14 | 472 | 62 | 518 | 9.43e-75 | 245 |
| MS.gene059788.t1 | AT3G26590 | 35.038 | 391 | 242 | 4 | 98 | 482 | 1 | 385 | 1.38e-74 | 240 |
| MS.gene059788.t1 | AT1G33080 | 33.906 | 466 | 298 | 3 | 10 | 472 | 9 | 467 | 6.44e-74 | 241 |
| MS.gene059788.t1 | AT5G10420 | 35.320 | 453 | 280 | 4 | 7 | 453 | 5 | 450 | 6.91e-74 | 241 |
| MS.gene059788.t1 | AT1G33080 | 33.906 | 466 | 298 | 3 | 10 | 472 | 9 | 467 | 8.01e-74 | 241 |
| MS.gene059788.t1 | AT5G65380 | 32.623 | 469 | 307 | 6 | 7 | 472 | 7 | 469 | 4.08e-70 | 231 |
| MS.gene059788.t1 | AT4G25640 | 33.045 | 463 | 305 | 3 | 12 | 472 | 5 | 464 | 3.62e-67 | 224 |
| MS.gene059788.t1 | AT4G25640 | 33.045 | 463 | 305 | 3 | 12 | 472 | 5 | 464 | 7.39e-67 | 224 |
| MS.gene059788.t1 | AT2G38510 | 30.973 | 452 | 305 | 3 | 39 | 483 | 5 | 456 | 7.76e-67 | 223 |
| MS.gene059788.t1 | AT1G66760 | 35.650 | 331 | 213 | 0 | 142 | 472 | 2 | 332 | 2.28e-66 | 217 |
| MS.gene059788.t1 | AT5G19700 | 30.238 | 463 | 318 | 2 | 18 | 479 | 17 | 475 | 9.57e-66 | 221 |
| MS.gene059788.t1 | AT4G29140 | 30.716 | 433 | 300 | 0 | 38 | 470 | 54 | 486 | 1.77e-65 | 220 |
| MS.gene059788.t1 | AT5G52050 | 29.325 | 474 | 317 | 4 | 6 | 470 | 7 | 471 | 1.34e-64 | 218 |
| MS.gene059788.t1 | AT1G58340 | 31.294 | 425 | 292 | 0 | 27 | 451 | 45 | 469 | 3.90e-64 | 217 |
| MS.gene059788.t1 | AT4G23030 | 33.333 | 489 | 302 | 8 | 12 | 483 | 3 | 484 | 3.96e-64 | 216 |
| MS.gene059788.t1 | AT4G25640 | 32.639 | 432 | 286 | 3 | 12 | 441 | 5 | 433 | 2.46e-62 | 210 |
| MS.gene059788.t1 | AT5G17700 | 33.410 | 434 | 284 | 5 | 39 | 470 | 33 | 463 | 1.28e-61 | 209 |
| MS.gene059788.t1 | AT5G17700 | 33.410 | 434 | 284 | 5 | 39 | 470 | 33 | 463 | 1.28e-61 | 209 |
| MS.gene059788.t1 | AT3G59030 | 32.134 | 417 | 262 | 6 | 7 | 405 | 3 | 416 | 4.07e-61 | 206 |
| MS.gene059788.t1 | AT5G49130 | 28.482 | 481 | 321 | 3 | 11 | 477 | 6 | 477 | 1.34e-60 | 207 |
| MS.gene059788.t1 | AT1G71870 | 30.000 | 460 | 294 | 4 | 11 | 451 | 2 | 452 | 7.37e-60 | 205 |
| MS.gene059788.t1 | AT3G03620 | 31.590 | 459 | 302 | 5 | 16 | 470 | 16 | 466 | 8.12e-60 | 204 |
| MS.gene059788.t1 | AT3G03620 | 31.590 | 459 | 302 | 5 | 16 | 470 | 16 | 466 | 8.12e-60 | 204 |
| MS.gene059788.t1 | AT1G33110 | 33.929 | 392 | 251 | 4 | 16 | 406 | 17 | 401 | 2.75e-59 | 201 |
| MS.gene059788.t1 | AT4G22790 | 30.979 | 439 | 297 | 4 | 38 | 472 | 28 | 464 | 1.68e-55 | 193 |
| MS.gene059788.t1 | AT1G15180 | 38.889 | 270 | 165 | 0 | 136 | 405 | 11 | 280 | 3.30e-55 | 190 |
| MS.gene059788.t1 | AT5G17700 | 32.520 | 369 | 244 | 5 | 39 | 405 | 33 | 398 | 1.57e-46 | 167 |
| MS.gene059788.t1 | AT2G04066 | 35.556 | 135 | 79 | 1 | 338 | 472 | 28 | 154 | 2.65e-21 | 91.3 |
Find 90 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAACATGAGTTGAATTT+TGG | 0.138353 | 2.4:+19385298 | None:intergenic |
| GTGCTACTCTTGCTAATTCT+TGG | 0.196457 | 2.4:-19385184 | MS.gene059788:CDS |
| TTGTATTTGGCCATGATATA+TGG | 0.227753 | 2.4:-19382424 | MS.gene059788:CDS |
| CAAGGAGGAGAGAGAGCTTT+AGG | 0.245659 | 2.4:+19382468 | None:intergenic |
| CACAAGAGTTTCCAATGAAT+TGG | 0.264220 | 2.4:-19382534 | MS.gene059788:CDS |
| TAAGACCGATTTGCAGTATA+AGG | 0.273484 | 2.4:-19382096 | MS.gene059788:intron |
| ATTGCTTACATGATCACTTA+TGG | 0.287008 | 2.4:-19382836 | MS.gene059788:CDS |
| GTCATGCTTGTTGGTCATCT+TGG | 0.292545 | 2.4:-19385224 | MS.gene059788:CDS |
| GAAGTTGTTATTTGTGAATC+AGG | 0.295836 | 2.4:+19382976 | None:intergenic |
| TTCCACCATTTCTCTATTTG+TGG | 0.302774 | 2.4:+19385344 | None:intergenic |
| TTATGCAAGTTTGGAGTATT+GGG | 0.305683 | 2.4:-19383034 | MS.gene059788:intron |
| AATAAATTTGTAAGAATCAT+TGG | 0.316353 | 2.4:+19385272 | None:intergenic |
| TCTGTCCAAGGTGTCTTATC+AGG | 0.328815 | 2.4:-19382317 | MS.gene059788:intron |
| CAACTTCATTGATTGCAATA+TGG | 0.330876 | 2.4:-19382960 | MS.gene059788:intron |
| TTAAGTTGTTAAACAACAAT+AGG | 0.334821 | 2.4:+19381314 | None:intergenic |
| TGTGGATTGGTGTGTCAAAC+TGG | 0.344629 | 2.4:-19381410 | MS.gene059788:CDS |
| ATTATGCAAGTTTGGAGTAT+TGG | 0.350836 | 2.4:-19383035 | MS.gene059788:intron |
| TTGGTTTCTGTCATGCTTGT+TGG | 0.351093 | 2.4:-19385233 | MS.gene059788:CDS |
| TGATAGTCCTATTATCAAAA+AGG | 0.356312 | 2.4:-19382387 | MS.gene059788:CDS |
| GTTCATGTTGGAATTGCATA+TGG | 0.356912 | 2.4:-19383681 | MS.gene059788:CDS |
| CAATCATTATATCAATTGTT+TGG | 0.358665 | 2.4:-19383890 | MS.gene059788:CDS |
| CTGCAACTTCTATTTCACTA+TGG | 0.362518 | 2.4:-19383617 | MS.gene059788:CDS |
| CTGTCTCAGGTTGGTTTAAG+TGG | 0.365386 | 2.4:-19384011 | MS.gene059788:intron |
| TTGCATATGGATTTGTTCAA+TGG | 0.367870 | 2.4:-19383668 | MS.gene059788:CDS |
| AAGGAGGAGAGAGAGCTTTA+GGG | 0.372976 | 2.4:+19382469 | None:intergenic |
| TTGGACAGAATCTAGTAGTA+TGG | 0.375092 | 2.4:+19382331 | None:intergenic |
| CTTGGTGAGCTTCAGTTAGC+TGG | 0.379613 | 2.4:-19385206 | MS.gene059788:CDS |
| TGGACTGGTTTAAATTTCAT+AGG | 0.381642 | 2.4:-19383648 | MS.gene059788:CDS |
| AATCCAAGGAGACATGAAAT+TGG | 0.384730 | 2.4:+19382119 | None:intergenic |
| TGGATATCAATGATAATGTT+AGG | 0.394235 | 2.4:-19383597 | MS.gene059788:CDS |
| ACACTCTGCGGACAAGGATT+TGG | 0.397575 | 2.4:-19383978 | MS.gene059788:CDS |
| TTGGCCTGCTCCCAATTCAT+TGG | 0.400145 | 2.4:+19382523 | None:intergenic |
| CTAAAGCTCTCTCTCCTCCT+TGG | 0.416995 | 2.4:-19382467 | MS.gene059788:CDS |
| ATGATATAGGGTTTATGGAT+TGG | 0.419805 | 2.4:-19381440 | MS.gene059788:intron |
| CCATGATCATCTGCTAATAG+AGG | 0.432700 | 2.4:+19385383 | None:intergenic |
| TGGACTAAACTGAATCTCTC+AGG | 0.432935 | 2.4:-19381356 | MS.gene059788:CDS |
| TGTCACTGGCGTAGCAGTTA+TGG | 0.436994 | 2.4:-19385156 | MS.gene059788:intron |
| ACAAGAGTTTCCAATGAATT+GGG | 0.444602 | 2.4:-19382533 | MS.gene059788:CDS |
| TGCCTTCTGCTGCAATGGTA+TGG | 0.444743 | 2.4:-19383479 | MS.gene059788:intron |
| CAAGACCACAAATAGAGAAA+TGG | 0.449315 | 2.4:-19385349 | MS.gene059788:CDS |
| AATTCTTGGTTTAGTGTCAC+TGG | 0.452462 | 2.4:-19385170 | MS.gene059788:CDS |
| GAAATGGTGGAACAAAATCT+TGG | 0.453708 | 2.4:-19385333 | MS.gene059788:CDS |
| AGCTTTGCCTTCTGCTGCAA+TGG | 0.454552 | 2.4:-19383484 | MS.gene059788:CDS |
| TTACCAATTTCATGTCTCCT+TGG | 0.458402 | 2.4:-19382122 | MS.gene059788:CDS |
| CAAAGAAATTTAAGAATACA+TGG | 0.465514 | 2.4:-19383557 | MS.gene059788:CDS |
| TTATGGATTGGTCTGATATG+TGG | 0.475106 | 2.4:-19381428 | MS.gene059788:CDS |
| GCAAAAGAATATCACATGTT+GGG | 0.480088 | 2.4:-19383954 | MS.gene059788:CDS |
| CGCAAAAGAATATCACATGT+TGG | 0.487458 | 2.4:-19383955 | MS.gene059788:CDS |
| GCAGGGGTGGCTAGAGGATG+TGG | 0.492719 | 2.4:-19382197 | MS.gene059788:intron |
| GGTTATACTTTCAGCTATAC+CGG | 0.496375 | 2.4:-19383709 | MS.gene059788:CDS |
| TATGGATTTGTTCAATGGAC+TGG | 0.501955 | 2.4:-19383663 | MS.gene059788:CDS |
| CTAGAAACACTCTGCGGACA+AGG | 0.502058 | 2.4:-19383984 | MS.gene059788:CDS |
| AAAGCTGAATCCATATATCA+TGG | 0.508008 | 2.4:+19382414 | None:intergenic |
| CTAGTCTTATGTTTGCAAGC+AGG | 0.508816 | 2.4:+19383505 | None:intergenic |
| GTTGTTAAACAACAATAGGT+TGG | 0.509921 | 2.4:+19381318 | None:intergenic |
| ATGCTATATGCAAATAATCC+TGG | 0.515013 | 2.4:+19383783 | None:intergenic |
| GTTTCCAATGAATTGGGAGC+AGG | 0.516102 | 2.4:-19382527 | MS.gene059788:CDS |
| AGGATGTGGTTGGCAGCACT+TGG | 0.517158 | 2.4:-19382183 | MS.gene059788:CDS |
| GAAAGAGCAAAACATGCAAT+GGG | 0.520409 | 2.4:-19382497 | MS.gene059788:CDS |
| CCTCTATTAGCAGATGATCA+TGG | 0.522596 | 2.4:-19385383 | MS.gene059788:CDS |
| AGAAAGAGCAAAACATGCAA+TGG | 0.535451 | 2.4:-19382498 | MS.gene059788:CDS |
| GGGTGGCTAGAGGATGTGGT+TGG | 0.538894 | 2.4:-19382193 | MS.gene059788:CDS |
| GCATCTTGCAAAACTTGTTG+AGG | 0.540279 | 2.4:-19383764 | MS.gene059788:CDS |
| CAATGTCATGAGATTGATGA+AGG | 0.548521 | 2.4:+19383841 | None:intergenic |
| GATTGGTCTGATATGTGGAT+TGG | 0.550595 | 2.4:-19381423 | MS.gene059788:CDS |
| TACCATACCATTGCAGCAGA+AGG | 0.554425 | 2.4:+19383477 | None:intergenic |
| TATATGAAGTTTCTTATACC+AGG | 0.554707 | 2.4:-19383801 | MS.gene059788:CDS |
| ATGTTGGGAATTTATCTACA+AGG | 0.560309 | 2.4:-19383939 | MS.gene059788:CDS |
| GCAAATCGGTCTTAAATCCA+AGG | 0.561263 | 2.4:+19382105 | None:intergenic |
| ACTGGTTTAAATTTCATAGG+TGG | 0.564576 | 2.4:-19383645 | MS.gene059788:CDS |
| GGACTAAACTGAATCTCTCA+GGG | 0.566867 | 2.4:-19381355 | MS.gene059788:CDS |
| ATTCCAACATGAACTAATGC+CGG | 0.579060 | 2.4:+19383690 | None:intergenic |
| GACCACAAATAGAGAAATGG+TGG | 0.585994 | 2.4:-19385346 | MS.gene059788:CDS |
| GTGGATTGGTGTGTCAAACT+GGG | 0.589183 | 2.4:-19381409 | MS.gene059788:CDS |
| ACAATCTGTAGTAATGCCAC+TGG | 0.591821 | 2.4:-19383730 | MS.gene059788:CDS |
| ATACCGGCATTAGTTCATGT+TGG | 0.592170 | 2.4:-19383693 | MS.gene059788:CDS |
| ATACTACTAGATTCTGTCCA+AGG | 0.600992 | 2.4:-19382329 | MS.gene059788:CDS |
| AATAATGCAGGGGTGGCTAG+AGG | 0.604681 | 2.4:-19382203 | MS.gene059788:intron |
| AAATTTAAGAATACATGGAG+AGG | 0.607514 | 2.4:-19383552 | MS.gene059788:CDS |
| GCGGCAAGTATCATTTCAGA+TGG | 0.611934 | 2.4:-19385416 | MS.gene059788:CDS |
| TTAAACCTGATAAGACACCT+TGG | 0.620465 | 2.4:+19382312 | None:intergenic |
| ATGGTCTTAGTGCAGCTGCA+AGG | 0.630564 | 2.4:-19382817 | MS.gene059788:intron |
| AGTATGGAAATAGCAAGCAA+AGG | 0.641984 | 2.4:+19382347 | None:intergenic |
| TCAAAACAAAACATAAACCA+AGG | 0.664534 | 2.4:+19382450 | None:intergenic |
| AGTGAAATAGAAGTTGCAGT+CGG | 0.711071 | 2.4:+19383621 | None:intergenic |
| ATAGCTGAAAGTATAACCAG+TGG | 0.720921 | 2.4:+19383714 | None:intergenic |
| AAACAAAACATAAACCAAGG+AGG | 0.722868 | 2.4:+19382453 | None:intergenic |
| TGGATTGGTGTGTCAAACTG+GGG | 0.738156 | 2.4:-19381408 | MS.gene059788:CDS |
| GACTAAACTGAATCTCTCAG+GGG | 0.747563 | 2.4:-19381354 | MS.gene059788:CDS |
| GGTGCACTAGAAACACTCTG+CGG | 0.812696 | 2.4:-19383990 | MS.gene059788:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCAATTAAAGTAAATT+TGG | - | chr2.4:19382017-19382036 | MS.gene059788:intron | 10.0% |
| !!! | TTATGTTATTTTGTTATTTA+CGG | + | chr2.4:19385156-19385175 | None:intergenic | 10.0% |
| !! | AAAAAAATGATATATTTGCA+AGG | - | chr2.4:19383551-19383570 | MS.gene059788:CDS | 15.0% |
| !! | AAAAACAATGATTAAACAAA+TGG | + | chr2.4:19385267-19385286 | None:intergenic | 15.0% |
| !! | AAGGAAAAGAAATATTAAAA+AGG | - | chr2.4:19382105-19382124 | MS.gene059788:CDS | 15.0% |
| !! | AATAAATTTGTAAGAATCAT+TGG | + | chr2.4:19381472-19381491 | None:intergenic | 15.0% |
| !! | AATATTATACACATATTACA+TGG | + | chr2.4:19383437-19383456 | None:intergenic | 15.0% |
| !! | AGGAAAAGAAATATTAAAAA+GGG | - | chr2.4:19382106-19382125 | MS.gene059788:CDS | 15.0% |
| !! | GTAAGATTCATAATATATTA+AGG | + | chr2.4:19383672-19383691 | None:intergenic | 15.0% |
| !!! | ACTAAAAGTAAATATGTTTT+TGG | + | chr2.4:19383609-19383628 | None:intergenic | 15.0% |
| !!! | ATTTTATTACTTGATTACTT+TGG | - | chr2.4:19381489-19381508 | MS.gene059788:intron | 15.0% |
| !!! | TAGTTTTATAAATTACATGA+AGG | - | chr2.4:19382086-19382105 | MS.gene059788:intron | 15.0% |
| !!! | TATGTGTATAATATTCATTT+TGG | - | chr2.4:19383442-19383461 | MS.gene059788:intron | 15.0% |
| !!! | TATTTTATATTATGCAAGTT+TGG | - | chr2.4:19383698-19383717 | MS.gene059788:CDS | 15.0% |
| !!! | TTTGAATGTTTTATGATATA+GGG | - | chr2.4:19385289-19385308 | MS.gene059788:CDS | 15.0% |
| !!! | TTTTGAATGTTTTATGATAT+AGG | - | chr2.4:19385288-19385307 | MS.gene059788:CDS | 15.0% |
| !! | AAATTAGTTAGTACATTCAA+TGG | - | chr2.4:19385108-19385127 | MS.gene059788:intron | 20.0% |
| !! | AATATAGAAATTAGAAACGA+TGG | + | chr2.4:19382325-19382344 | None:intergenic | 20.0% |
| !! | ATAACAAAATAACATAAGAC+AGG | - | chr2.4:19385159-19385178 | MS.gene059788:CDS | 20.0% |
| !! | ATCATTAACAAAAACAACTT+AGG | - | chr2.4:19384495-19384514 | MS.gene059788:intron | 20.0% |
| !! | CAAAGAAATTTAAGAATACA+TGG | - | chr2.4:19383184-19383203 | MS.gene059788:intron | 20.0% |
| !! | CAATCATTATATCAATTGTT+TGG | - | chr2.4:19382851-19382870 | MS.gene059788:CDS | 20.0% |
| !! | GGAAAAGAAATATTAAAAAG+GGG | - | chr2.4:19382107-19382126 | MS.gene059788:CDS | 20.0% |
| !! | TAACAAAATAACATAAGACA+GGG | - | chr2.4:19385160-19385179 | MS.gene059788:CDS | 20.0% |
| !! | TATGTTGAGATATAATAAAG+AGG | + | chr2.4:19385021-19385040 | None:intergenic | 20.0% |
| !! | TCAAAACTATTTATCAAACA+AGG | + | chr2.4:19383347-19383366 | None:intergenic | 20.0% |
| !! | TCATTAACAAAAACAACTTA+GGG | - | chr2.4:19384496-19384515 | MS.gene059788:intron | 20.0% |
| !! | TTTATATGTATTCAAGTCAA+TGG | - | chr2.4:19381858-19381877 | MS.gene059788:intron | 20.0% |
| !!! | AAATATTAAAAAGGGGTATA+AGG | - | chr2.4:19382114-19382133 | MS.gene059788:CDS | 20.0% |
| !!! | AATATTTTGTTCATGTACAA+TGG | - | chr2.4:19381637-19381656 | MS.gene059788:intron | 20.0% |
| !!! | ATATTTTGTTCATGTACAAT+GGG | - | chr2.4:19381638-19381657 | MS.gene059788:intron | 20.0% |
| !!! | ATGTTCTTTTTTCTTTCTTT+TGG | - | chr2.4:19383369-19383388 | MS.gene059788:intron | 20.0% |
| !!! | ATTTTAAACAGAAATCTTGA+AGG | + | chr2.4:19383397-19383416 | None:intergenic | 20.0% |
| !!! | CAACTAAATTTGAAATCTAA+GGG | + | chr2.4:19384865-19384884 | None:intergenic | 20.0% |
| !!! | TCAACTAAATTTGAAATCTA+AGG | + | chr2.4:19384866-19384885 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGATACTTGTATT+TGG | - | chr2.4:19384304-19384323 | MS.gene059788:intron | 20.0% |
| ! | AAAGGGTTAAATAAAGTGAA+AGG | + | chr2.4:19383304-19383323 | None:intergenic | 25.0% |
| ! | AAAGTATATCCACTAACATA+AGG | - | chr2.4:19382441-19382460 | MS.gene059788:CDS | 25.0% |
| ! | AAATTTAAGAATACATGGAG+AGG | - | chr2.4:19383189-19383208 | MS.gene059788:intron | 25.0% |
| ! | AACAATGTGTTAAATAATGC+AGG | - | chr2.4:19384526-19384545 | MS.gene059788:intron | 25.0% |
| ! | ACAATGTGTTAAATAATGCA+GGG | - | chr2.4:19384527-19384546 | MS.gene059788:intron | 25.0% |
| ! | ACCAACGACTATATTAATAA+GGG | - | chr2.4:19385053-19385072 | MS.gene059788:intron | 25.0% |
| ! | ATTAACAAAAACAACTTAGG+GGG | - | chr2.4:19384498-19384517 | MS.gene059788:intron | 25.0% |
| ! | CAAAAGTTCTACATATTACA+AGG | - | chr2.4:19383498-19383517 | MS.gene059788:CDS | 25.0% |
| ! | CATTAACAAAAACAACTTAG+GGG | - | chr2.4:19384497-19384516 | MS.gene059788:intron | 25.0% |
| ! | CTAATTTCTATATTCAGAAC+TGG | - | chr2.4:19382331-19382350 | MS.gene059788:CDS | 25.0% |
| ! | CTGAAGAGCTTATATTAATA+AGG | + | chr2.4:19382529-19382548 | None:intergenic | 25.0% |
| ! | CTTATTAATATAAGCTCTTC+AGG | - | chr2.4:19382527-19382546 | MS.gene059788:CDS | 25.0% |
| ! | GATATCAAGAATAATCATCT+TGG | - | chr2.4:19385233-19385252 | MS.gene059788:CDS | 25.0% |
| ! | TATATGAAGTTTCTTATACC+AGG | - | chr2.4:19382940-19382959 | MS.gene059788:intron | 25.0% |
| ! | TATTATAACGTTATGAGTAG+TGG | - | chr2.4:19381910-19381929 | MS.gene059788:intron | 25.0% |
| ! | TCAAAACAAAACATAAACCA+AGG | + | chr2.4:19384294-19384313 | None:intergenic | 25.0% |
| ! | TCTACATATTACAAGGTTTA+GGG | - | chr2.4:19383505-19383524 | MS.gene059788:CDS | 25.0% |
| ! | TGATAGTCCTATTATCAAAA+AGG | - | chr2.4:19384354-19384373 | MS.gene059788:intron | 25.0% |
| ! | TGTAAGATCAATCATCAAAA+GGG | + | chr2.4:19383321-19383340 | None:intergenic | 25.0% |
| ! | TTAATCTTGTGACAACATTT+AGG | + | chr2.4:19382646-19382665 | None:intergenic | 25.0% |
| ! | TTCTACATATTACAAGGTTT+AGG | - | chr2.4:19383504-19383523 | MS.gene059788:CDS | 25.0% |
| ! | TTGTAAGATCAATCATCAAA+AGG | + | chr2.4:19383322-19383341 | None:intergenic | 25.0% |
| !! | ATGTTAGTAATGTTAGTTTC+TGG | - | chr2.4:19382199-19382218 | MS.gene059788:intron | 25.0% |
| !! | GTTTTATGATATAGGGTTTA+TGG | - | chr2.4:19385296-19385315 | MS.gene059788:CDS | 25.0% |
| !! | TGGATATCAATGATAATGTT+AGG | - | chr2.4:19383144-19383163 | MS.gene059788:intron | 25.0% |
| !! | TGTTAGTAATGTTAGTTTCT+GGG | - | chr2.4:19382200-19382219 | MS.gene059788:intron | 25.0% |
| !! | TTAAATTCCTCATCTCTTTT+AGG | - | chr2.4:19384448-19384467 | MS.gene059788:intron | 25.0% |
| !! | TTAGTGGATATACTTTAGTA+AGG | + | chr2.4:19382437-19382456 | None:intergenic | 25.0% |
| !! | TTTTACCTTATACTGCAAAT+CGG | + | chr2.4:19384653-19384672 | None:intergenic | 25.0% |
| !!! | TGAAAACATGAGTTGAATTT+TGG | + | chr2.4:19381446-19381465 | None:intergenic | 25.0% |
| AAACAAAACATAAACCAAGG+AGG | + | chr2.4:19384291-19384310 | None:intergenic | 30.0% | |
| AAAGCTGAATCCATATATCA+TGG | + | chr2.4:19384330-19384349 | None:intergenic | 30.0% | |
| AACTTAACCTAAAAGAGATG+AGG | + | chr2.4:19384458-19384477 | None:intergenic | 30.0% | |
| AATGAATGTGTAATCGTGAT+AGG | - | chr2.4:19384812-19384831 | MS.gene059788:intron | 30.0% | |
| AATGTGATTGTATATGACTG+CGG | - | chr2.4:19384123-19384142 | MS.gene059788:intron | 30.0% | |
| ACAAGAGTTTCCAATGAATT+GGG | - | chr2.4:19384208-19384227 | MS.gene059788:intron | 30.0% | |
| ACCCTTATTAATATAGTCGT+TGG | + | chr2.4:19385057-19385076 | None:intergenic | 30.0% | |
| AGTGTTTCCGTTTAATAAGT+AGG | + | chr2.4:19384786-19384805 | None:intergenic | 30.0% | |
| ATGAATGTGTAATCGTGATA+GGG | - | chr2.4:19384813-19384832 | MS.gene059788:intron | 30.0% | |
| ATGCTATATGCAAATAATCC+TGG | + | chr2.4:19382961-19382980 | None:intergenic | 30.0% | |
| ATGTGACACTTAACATGAAA+CGG | + | chr2.4:19384684-19384703 | None:intergenic | 30.0% | |
| ATGTTGGGAATTTATCTACA+AGG | - | chr2.4:19382802-19382821 | MS.gene059788:intron | 30.0% | |
| ATTGCTTACATGATCACTTA+TGG | - | chr2.4:19383905-19383924 | MS.gene059788:CDS | 30.0% | |
| CAATACATGTACAAGTATGA+AGG | + | chr2.4:19384161-19384180 | None:intergenic | 30.0% | |
| CAATGAGATAAAAAGTTGCA+AGG | + | chr2.4:19384597-19384616 | None:intergenic | 30.0% | |
| CAATGTGTTAAATAATGCAG+GGG | - | chr2.4:19384528-19384547 | MS.gene059788:intron | 30.0% | |
| CACCAACGACTATATTAATA+AGG | - | chr2.4:19385052-19385071 | MS.gene059788:intron | 30.0% | |
| CTTATTAATATAGTCGTTGG+TGG | + | chr2.4:19385054-19385073 | None:intergenic | 30.0% | |
| GCAAAAGAATATCACATGTT+GGG | - | chr2.4:19382787-19382806 | MS.gene059788:intron | 30.0% | |
| GTATACCCCTACTTATTAAA+CGG | - | chr2.4:19384776-19384795 | MS.gene059788:intron | 30.0% | |
| GTGTTTCCGTTTAATAAGTA+GGG | + | chr2.4:19384785-19384804 | None:intergenic | 30.0% | |
| GTTTAGGGACTAAAAAAACA+AGG | - | chr2.4:19383520-19383539 | MS.gene059788:CDS | 30.0% | |
| TGACAACATTTAGGTATGTT+TGG | + | chr2.4:19382637-19382656 | None:intergenic | 30.0% | |
| TGATTGTTTGAGAGAGTTTA+TGG | - | chr2.4:19382471-19382490 | MS.gene059788:CDS | 30.0% | |
| TGTTTCCGTTTAATAAGTAG+GGG | + | chr2.4:19384784-19384803 | None:intergenic | 30.0% | |
| TTCACATTGATCTAAGAACA+TGG | + | chr2.4:19382373-19382392 | None:intergenic | 30.0% | |
| TTGATTTATTCTGTCACAGT+TGG | + | chr2.4:19382005-19382024 | None:intergenic | 30.0% | |
| TTGTATTTGGCCATGATATA+TGG | - | chr2.4:19384317-19384336 | MS.gene059788:intron | 30.0% | |
| TTTAGTAAGGCAATTCAATC+AGG | + | chr2.4:19382424-19382443 | None:intergenic | 30.0% | |
| ! | AAGAGTATATGTTCTGAGTA+AGG | + | chr2.4:19382281-19382300 | None:intergenic | 30.0% |
| ! | AATAAGTAGGGGTATACTAA+TGG | + | chr2.4:19384773-19384792 | None:intergenic | 30.0% |
| ! | ACTGGTTTAAATTTCATAGG+TGG | - | chr2.4:19383096-19383115 | MS.gene059788:intron | 30.0% |
| ! | ATTAAAAAGGGGTATAAGGT+TGG | - | chr2.4:19382118-19382137 | MS.gene059788:CDS | 30.0% |
| ! | ATTATGCAAGTTTGGAGTAT+TGG | - | chr2.4:19383706-19383725 | MS.gene059788:CDS | 30.0% |
| ! | CAACTTCATTGATTGCAATA+TGG | - | chr2.4:19383781-19383800 | MS.gene059788:CDS | 30.0% |
| ! | CATTGTTGCATAAATCCTTT+TGG | - | chr2.4:19383982-19384001 | MS.gene059788:CDS | 30.0% |
| ! | CTATATTCAGAACTGGATTT+TGG | - | chr2.4:19382338-19382357 | MS.gene059788:CDS | 30.0% |
| ! | CTTGCAACTTTTTATCTCAT+TGG | - | chr2.4:19384595-19384614 | MS.gene059788:intron | 30.0% |
| ! | GTTAGTAATGTTAGTTTCTG+GGG | - | chr2.4:19382201-19382220 | MS.gene059788:intron | 30.0% |
| ! | TCATTGATTGCAATATGGTA+TGG | - | chr2.4:19383786-19383805 | MS.gene059788:CDS | 30.0% |
| ! | TTATGCAAGTTTGGAGTATT+GGG | - | chr2.4:19383707-19383726 | MS.gene059788:CDS | 30.0% |
| ! | TTGCATATGGATTTGTTCAA+TGG | - | chr2.4:19383073-19383092 | MS.gene059788:intron | 30.0% |
| !! | GAAGTTGTTATTTGTGAATC+AGG | + | chr2.4:19383768-19383787 | None:intergenic | 30.0% |
| !! | GCAAACTCCTTTTTGATAAT+AGG | + | chr2.4:19384364-19384383 | None:intergenic | 30.0% |
| !! | TGATTTTAGTCACTCCAATA+TGG | + | chr2.4:19383480-19383499 | None:intergenic | 30.0% |
| !! | TGGACTGGTTTAAATTTCAT+AGG | - | chr2.4:19383093-19383112 | MS.gene059788:intron | 30.0% |
| !!! | GGTATTCTTTTTTGATGAAG+TGG | + | chr2.4:19384892-19384911 | None:intergenic | 30.0% |
| AATCCAAGGAGACATGAAAT+TGG | + | chr2.4:19384625-19384644 | None:intergenic | 35.0% | |
| AATTCTTGGTTTAGTGTCAC+TGG | - | chr2.4:19381571-19381590 | MS.gene059788:intron | 35.0% | |
| AGAAAGAGCAAAACATGCAA+TGG | - | chr2.4:19384243-19384262 | MS.gene059788:intron | 35.0% | |
| AGTATGGAAATAGCAAGCAA+AGG | + | chr2.4:19384397-19384416 | None:intergenic | 35.0% | |
| AGTGAAATAGAAGTTGCAGT+CGG | + | chr2.4:19383123-19383142 | None:intergenic | 35.0% | |
| ATACTACTAGATTCTGTCCA+AGG | - | chr2.4:19384412-19384431 | MS.gene059788:intron | 35.0% | |
| ATTCCAACATGAACTAATGC+CGG | + | chr2.4:19383054-19383073 | None:intergenic | 35.0% | |
| CAAGACCACAAATAGAGAAA+TGG | - | chr2.4:19381392-19381411 | MS.gene059788:CDS | 35.0% | |
| CAATGTCATGAGATTGATGA+AGG | + | chr2.4:19382903-19382922 | None:intergenic | 35.0% | |
| CACAAGAGTTTCCAATGAAT+TGG | - | chr2.4:19384207-19384226 | MS.gene059788:intron | 35.0% | |
| CGCAAAAGAATATCACATGT+TGG | - | chr2.4:19382786-19382805 | MS.gene059788:intron | 35.0% | |
| CTGCAACTTCTATTTCACTA+TGG | - | chr2.4:19383124-19383143 | MS.gene059788:intron | 35.0% | |
| GAAAGAGCAAAACATGCAAT+GGG | - | chr2.4:19384244-19384263 | MS.gene059788:intron | 35.0% | |
| GGTTATACTTTCAGCTATAC+CGG | - | chr2.4:19383032-19383051 | MS.gene059788:intron | 35.0% | |
| GTTCATGTTGGAATTGCATA+TGG | - | chr2.4:19383060-19383079 | MS.gene059788:intron | 35.0% | |
| TCTTAGACTATAGGAAATCC+AGG | + | chr2.4:19384009-19384028 | None:intergenic | 35.0% | |
| TGTACAAGTATGAAGGAACT+TGG | + | chr2.4:19384154-19384173 | None:intergenic | 35.0% | |
| TTAAACCTGATAAGACACCT+TGG | + | chr2.4:19384432-19384451 | None:intergenic | 35.0% | |
| TTACCAATTTCATGTCTCCT+TGG | - | chr2.4:19384619-19384638 | MS.gene059788:intron | 35.0% | |
| TTCCACCATTTCTCTATTTG+TGG | + | chr2.4:19381400-19381419 | None:intergenic | 35.0% | |
| TTGGACAGAATCTAGTAGTA+TGG | + | chr2.4:19384413-19384432 | None:intergenic | 35.0% | |
| ! | AGTATATGTTCTGAGTAAGG+AGG | + | chr2.4:19382278-19382297 | None:intergenic | 35.0% |
| ! | ATAGCTGAAAGTATAACCAG+TGG | + | chr2.4:19383030-19383049 | None:intergenic | 35.0% |
| ! | ATTGCATGTTTTGCTCTTTC+TGG | + | chr2.4:19384244-19384263 | None:intergenic | 35.0% |
| ! | CAATTAAAATTTTGCCCGAG+TGG | + | chr2.4:19384942-19384961 | None:intergenic | 35.0% |
| ! | GAAATGGTGGAACAAAATCT+TGG | - | chr2.4:19381408-19381427 | MS.gene059788:CDS | 35.0% |
| ! | TATGGATTTGTTCAATGGAC+TGG | - | chr2.4:19383078-19383097 | MS.gene059788:intron | 35.0% |
| ! | TTTTGACAAGGCATGTCAAA+TGG | - | chr2.4:19385365-19385384 | MS.gene059788:CDS | 35.0% |
| !! | CACTCGGGCAAAATTTTAAT+TGG | - | chr2.4:19384940-19384959 | MS.gene059788:intron | 35.0% |
| !! | GACCAACCTATTGTTGTTTA+AGG | - | chr2.4:19385421-19385440 | MS.gene059788:CDS | 35.0% |
| !! | TAAGACCGATTTGCAGTATA+AGG | - | chr2.4:19384645-19384664 | MS.gene059788:intron | 35.0% |
| !!! | GAAGTTTTGGTTTTCTTAGC+TGG | - | chr2.4:19383735-19383754 | MS.gene059788:CDS | 35.0% |
| !!! | GTATTGGGCTTTTGAAGTTT+TGG | - | chr2.4:19383722-19383741 | MS.gene059788:CDS | 35.0% |
| ACAATCTGTAGTAATGCCAC+TGG | - | chr2.4:19383011-19383030 | MS.gene059788:CDS | 40.0% | |
| ACGATACAGTTGCGAAAAAC+AGG | + | chr2.4:19384970-19384989 | None:intergenic | 40.0% | |
| ACTCCAATATGGTCTACATG+AGG | + | chr2.4:19383469-19383488 | None:intergenic | 40.0% | |
| AGCGCGATTTCTTAGACTAT+AGG | + | chr2.4:19384018-19384037 | None:intergenic | 40.0% | |
| ATACCGGCATTAGTTCATGT+TGG | - | chr2.4:19383048-19383067 | MS.gene059788:intron | 40.0% | |
| ATAGGAAATCCAGGTCCAAA+AGG | + | chr2.4:19384000-19384019 | None:intergenic | 40.0% | |
| CACACATGTCCTTATGTTAG+TGG | + | chr2.4:19382453-19382472 | None:intergenic | 40.0% | |
| CCATGATCATCTGCTAATAG+AGG | + | chr2.4:19381361-19381380 | None:intergenic | 40.0% | |
| CCTCTATTAGCAGATGATCA+TGG | - | chr2.4:19381358-19381377 | MS.gene059788:CDS | 40.0% | |
| GACCACAAATAGAGAAATGG+TGG | - | chr2.4:19381395-19381414 | MS.gene059788:CDS | 40.0% | |
| GACTAAACTGAATCTCTCAG+GGG | - | chr2.4:19385387-19385406 | MS.gene059788:CDS | 40.0% | |
| GCAAATCGGTCTTAAATCCA+AGG | + | chr2.4:19384639-19384658 | None:intergenic | 40.0% | |
| GGACTAAACTGAATCTCTCA+GGG | - | chr2.4:19385386-19385405 | MS.gene059788:CDS | 40.0% | |
| TACAGTTGCGAAAAACAGGT+TGG | + | chr2.4:19384966-19384985 | None:intergenic | 40.0% | |
| TATAAGGTTGGCGAGTGATA+AGG | - | chr2.4:19382130-19382149 | MS.gene059788:CDS | 40.0% | |
| TATTCTTCTCTGTCTCAGGT+TGG | - | chr2.4:19382721-19382740 | MS.gene059788:intron | 40.0% | |
| TGATAGGGTTCACGAATATG+TGG | - | chr2.4:19384828-19384847 | MS.gene059788:intron | 40.0% | |
| TGGACTAAACTGAATCTCTC+AGG | - | chr2.4:19385385-19385404 | MS.gene059788:CDS | 40.0% | |
| TGTGTTAAATAATGCAGGGG+TGG | - | chr2.4:19384531-19384550 | MS.gene059788:intron | 40.0% | |
| TTATGAGTAGTGGCTCATAC+TGG | - | chr2.4:19381920-19381939 | MS.gene059788:intron | 40.0% | |
| TTGGTTTCTGTCATGCTTGT+TGG | - | chr2.4:19381508-19381527 | MS.gene059788:intron | 40.0% | |
| ! | GCTTTATTCTTCTCTGTCTC+AGG | - | chr2.4:19382717-19382736 | MS.gene059788:intron | 40.0% |
| ! | GTGCTACTCTTGCTAATTCT+TGG | - | chr2.4:19381557-19381576 | MS.gene059788:intron | 40.0% |
| ! | TGCATAAATCCTTTTGGACC+TGG | - | chr2.4:19383988-19384007 | MS.gene059788:CDS | 40.0% |
| !! | CATGTTTTGCTCTTTCTGGT+TGG | + | chr2.4:19384240-19384259 | None:intergenic | 40.0% |
| !! | CTAGTCTTATGTTTGCAAGC+AGG | + | chr2.4:19383239-19383258 | None:intergenic | 40.0% |
| !! | GCATCTTGCAAAACTTGTTG+AGG | - | chr2.4:19382977-19382996 | MS.gene059788:CDS | 40.0% |
| AAGGAGGAGAGAGAGCTTTA+GGG | + | chr2.4:19384275-19384294 | None:intergenic | 45.0% | |
| AATTCTGTGTTCGCACTGCA+TGG | + | chr2.4:19383884-19383903 | None:intergenic | 45.0% | |
| CTTTAACACACTCGCTTTCG+CGG | - | chr2.4:19383959-19383978 | MS.gene059788:CDS | 45.0% | |
| GCGAGTGATAAGGCGATTAA+GGG | - | chr2.4:19382140-19382159 | MS.gene059788:CDS | 45.0% | |
| GCGGCAAGTATCATTTCAGA+TGG | - | chr2.4:19381325-19381344 | MS.gene059788:CDS | 45.0% | |
| GGTCCTCATGTAGACCATAT+TGG | - | chr2.4:19383463-19383482 | MS.gene059788:intron | 45.0% | |
| GTGGCTCATACTGGAATAAG+AGG | - | chr2.4:19381929-19381948 | MS.gene059788:intron | 45.0% | |
| GTTTCCAATGAATTGGGAGC+AGG | - | chr2.4:19384214-19384233 | MS.gene059788:intron | 45.0% | |
| TACCATACCATTGCAGCAGA+AGG | + | chr2.4:19383267-19383286 | None:intergenic | 45.0% | |
| TTGTCACTGATCTCGACAGT+TGG | + | chr2.4:19384105-19384124 | None:intergenic | 45.0% | |
| ! | GTCATGCTTGTTGGTCATCT+TGG | - | chr2.4:19381517-19381536 | MS.gene059788:intron | 45.0% |
| ! | TAGTCGTTGGTGGAGTAGTT+TGG | + | chr2.4:19385044-19385063 | None:intergenic | 45.0% |
| ! | TAGTTTCTGGGGATAGAACC+CGG | - | chr2.4:19382212-19382231 | MS.gene059788:intron | 45.0% |
| ! | TCTGTCCAAGGTGTCTTATC+AGG | - | chr2.4:19384424-19384443 | MS.gene059788:intron | 45.0% |
| !! | CTGTCTCAGGTTGGTTTAAG+TGG | - | chr2.4:19382730-19382749 | MS.gene059788:intron | 45.0% |
| !! | GGGCACTCTTACTTTTGACA+AGG | - | chr2.4:19385353-19385372 | MS.gene059788:CDS | 45.0% |
| !! | GTGGATTGGTGTGTCAAACT+GGG | - | chr2.4:19385332-19385351 | MS.gene059788:CDS | 45.0% |
| !! | TGGATTGGTGTGTCAAACTG+GGG | - | chr2.4:19385333-19385352 | MS.gene059788:CDS | 45.0% |
| !! | TGTGGATTGGTGTGTCAAAC+TGG | - | chr2.4:19385331-19385350 | MS.gene059788:CDS | 45.0% |
| !! | AAATATAAATTAATCAATAA+GGG | + | chr2.4:19381752-19381771 | None:intergenic | 5.0% |
| !! | TAAATATAAATTAATCAATA+AGG | + | chr2.4:19381753-19381772 | None:intergenic | 5.0% |
| !!! | TTTTAAAATTTTATCTAAAT+TGG | + | chr2.4:19382050-19382069 | None:intergenic | 5.0% |
| AATAATGCAGGGGTGGCTAG+AGG | - | chr2.4:19384538-19384557 | MS.gene059788:intron | 50.0% | |
| ACACTCTGCGGACAAGGATT+TGG | - | chr2.4:19382763-19382782 | MS.gene059788:intron | 50.0% | |
| AGCTTTGCCTTCTGCTGCAA+TGG | - | chr2.4:19383257-19383276 | MS.gene059788:intron | 50.0% | |
| AGGGTTCACGAATATGTGGC+AGG | - | chr2.4:19384832-19384851 | MS.gene059788:intron | 50.0% | |
| AGTCACGTGGGTGTTTGTGT+TGG | + | chr2.4:19384918-19384937 | None:intergenic | 50.0% | |
| AGTGCAGCTGCAAGGTTAGT+TGG | - | chr2.4:19383932-19383951 | MS.gene059788:CDS | 50.0% | |
| CAAGGAGGAGAGAGAGCTTT+AGG | + | chr2.4:19384276-19384295 | None:intergenic | 50.0% | |
| CTAAAGCTCTCTCTCCTCCT+TGG | - | chr2.4:19384274-19384293 | MS.gene059788:intron | 50.0% | |
| CTAAGGGACGTTGAAGGATG+AGG | + | chr2.4:19382240-19382259 | None:intergenic | 50.0% | |
| CTAGAAACACTCTGCGGACA+AGG | - | chr2.4:19382757-19382776 | MS.gene059788:intron | 50.0% | |
| CTTGGTGAGCTTCAGTTAGC+TGG | - | chr2.4:19381535-19381554 | MS.gene059788:intron | 50.0% | |
| GGCGAGTGATAAGGCGATTA+AGG | - | chr2.4:19382139-19382158 | MS.gene059788:CDS | 50.0% | |
| GGTGCACTAGAAACACTCTG+CGG | - | chr2.4:19382751-19382770 | MS.gene059788:intron | 50.0% | |
| TGAGTAAGGAGGAGCTAGGT+TGG | + | chr2.4:19382267-19382286 | None:intergenic | 50.0% | |
| TGCCTTCTGCTGCAATGGTA+TGG | - | chr2.4:19383262-19383281 | MS.gene059788:intron | 50.0% | |
| TGTCACTGGCGTAGCAGTTA+TGG | - | chr2.4:19381585-19381604 | MS.gene059788:intron | 50.0% | |
| TTGGCCTGCTCCCAATTCAT+TGG | + | chr2.4:19384221-19384240 | None:intergenic | 50.0% | |
| ! | AGTTTCTGGGGATAGAACCC+GGG | - | chr2.4:19382213-19382232 | MS.gene059788:intron | 50.0% |
| ! | ATGGTCTTAGTGCAGCTGCA+AGG | - | chr2.4:19383924-19383943 | MS.gene059788:CDS | 50.0% |
| ! | GTCACAGTTGGTGCTTTCAG+AGG | + | chr2.4:19381993-19382012 | None:intergenic | 50.0% |
| ! | GTTCTGAGTAAGGAGGAGCT+AGG | + | chr2.4:19382271-19382290 | None:intergenic | 50.0% |
| !! | GAGCTAGGTTGGTGAGCTAA+GGG | + | chr2.4:19382256-19382275 | None:intergenic | 50.0% |
| ACACCCACGTGACTTCCACT+CGG | - | chr2.4:19384924-19384943 | MS.gene059788:intron | 55.0% | |
| ACGTTGAAGGATGAGGTCCC+GGG | + | chr2.4:19382233-19382252 | None:intergenic | 55.0% | |
| AGGATGTGGTTGGCAGCACT+TGG | - | chr2.4:19384558-19384577 | MS.gene059788:intron | 55.0% | |
| GACGTTGAAGGATGAGGTCC+CGG | + | chr2.4:19382234-19382253 | None:intergenic | 55.0% | |
| GGTGAGCTAAGGGACGTTGA+AGG | + | chr2.4:19382246-19382265 | None:intergenic | 55.0% | |
| ! | CGTGGGTGTTTGTGTTGGTC+TGG | + | chr2.4:19384913-19384932 | None:intergenic | 55.0% |
| !! | GGAGCTAGGTTGGTGAGCTA+AGG | + | chr2.4:19382257-19382276 | None:intergenic | 55.0% |
| CACCCACGTGACTTCCACTC+GGG | - | chr2.4:19384925-19384944 | MS.gene059788:intron | 60.0% | |
| GGGTGGCTAGAGGATGTGGT+TGG | - | chr2.4:19384548-19384567 | MS.gene059788:intron | 60.0% | |
| TGCCCGAGTGGAAGTCACGT+GGG | + | chr2.4:19384930-19384949 | None:intergenic | 60.0% | |
| TTGCCCGAGTGGAAGTCACG+TGG | + | chr2.4:19384931-19384950 | None:intergenic | 60.0% | |
| GCAGGGGTGGCTAGAGGATG+TGG | - | chr2.4:19384544-19384563 | MS.gene059788:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 19381322 | 19385441 | 19381322 | ID=MS.gene059788 |
| chr2.4 | mRNA | 19381322 | 19385441 | 19381322 | ID=MS.gene059788.t1;Parent=MS.gene059788 |
| chr2.4 | exon | 19385157 | 19385441 | 19385157 | ID=MS.gene059788.t1.exon1;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19385157 | 19385441 | 19385157 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| chr2.4 | exon | 19383480 | 19384024 | 19383480 | ID=MS.gene059788.t1.exon2;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19383480 | 19384024 | 19383480 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| chr2.4 | exon | 19382961 | 19383047 | 19382961 | ID=MS.gene059788.t1.exon3;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19382961 | 19383047 | 19382961 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| chr2.4 | exon | 19382818 | 19382874 | 19382818 | ID=MS.gene059788.t1.exon4;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19382818 | 19382874 | 19382818 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| chr2.4 | exon | 19382318 | 19382556 | 19382318 | ID=MS.gene059788.t1.exon5;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19382318 | 19382556 | 19382318 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| chr2.4 | exon | 19382097 | 19382215 | 19382097 | ID=MS.gene059788.t1.exon6;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19382097 | 19382215 | 19382097 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| chr2.4 | exon | 19381322 | 19381453 | 19381322 | ID=MS.gene059788.t1.exon7;Parent=MS.gene059788.t1 |
| chr2.4 | CDS | 19381322 | 19381453 | 19381322 | ID=cds.MS.gene059788.t1;Parent=MS.gene059788.t1 |
| Gene Sequence |
| Protein sequence |
