Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25880.t1 | XP_003601314.1 | 97.6 | 376 | 9 | 0 | 1 | 376 | 1 | 376 | 3.80E-206 | 727.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25880.t1 | P27725 | 34.9 | 372 | 213 | 6 | 2 | 369 | 464 | 810 | 2.0e-51 | 204.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25880.t1 | B7FM35 | 97.6 | 376 | 9 | 0 | 1 | 376 | 1 | 376 | 2.7e-206 | 727.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052665 | MS.gene25880 | 0.804524 | 2.07E-49 | -1.69E-46 |
| MS.gene058982 | MS.gene25880 | 0.803329 | 3.67E-49 | -1.69E-46 |
| MS.gene060165 | MS.gene25880 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene25880 | 0.800381 | 1.48E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25880.t1 | MTR_3g079330 | 97.606 | 376 | 9 | 0 | 1 | 376 | 1 | 376 | 0.0 | 730 |
| MS.gene25880.t1 | MTR_8g083210 | 34.759 | 374 | 213 | 9 | 3 | 369 | 550 | 899 | 3.35e-55 | 195 |
| MS.gene25880.t1 | MTR_8g083210 | 34.759 | 374 | 213 | 9 | 3 | 369 | 557 | 906 | 3.61e-55 | 195 |
| MS.gene25880.t1 | MTR_3g084500 | 33.957 | 374 | 216 | 10 | 3 | 369 | 327 | 676 | 2.99e-54 | 190 |
| MS.gene25880.t1 | MTR_3g084500 | 33.957 | 374 | 216 | 10 | 3 | 369 | 377 | 726 | 9.26e-54 | 189 |
| MS.gene25880.t1 | MTR_3g084500 | 33.957 | 374 | 216 | 10 | 3 | 369 | 547 | 896 | 2.36e-53 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25880.t1 | AT5G21060 | 69.867 | 375 | 113 | 0 | 1 | 375 | 1 | 375 | 0.0 | 530 |
| MS.gene25880.t1 | AT5G21060 | 69.496 | 377 | 113 | 1 | 1 | 375 | 1 | 377 | 0.0 | 525 |
| MS.gene25880.t1 | AT5G21060 | 69.231 | 377 | 114 | 1 | 1 | 375 | 1 | 377 | 0.0 | 524 |
| MS.gene25880.t1 | AT1G31230 | 34.448 | 299 | 184 | 5 | 81 | 369 | 605 | 901 | 1.66e-49 | 179 |
| MS.gene25880.t1 | AT4G19710 | 32.888 | 374 | 220 | 8 | 3 | 369 | 557 | 906 | 2.97e-47 | 172 |
| MS.gene25880.t1 | AT4G19710 | 32.237 | 304 | 177 | 7 | 3 | 301 | 557 | 836 | 7.28e-31 | 124 |
Find 93 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTGATGATTTGTTGAATA+AGG | 0.191803 | 3.2:-69748479 | MS.gene25880:CDS |
| TGCTGATATCGTGGATATTC+AGG | 0.217796 | 3.2:-69744237 | MS.gene25880:CDS |
| GGAATCGGAAGGAAAGATTT+TGG | 0.238686 | 3.2:-69748258 | MS.gene25880:CDS |
| TACATCAGGCCCCATTTCTT+TGG | 0.243020 | 3.2:+69744930 | None:intergenic |
| TTTGAAACAGGCTTTGATTC+TGG | 0.253238 | 3.2:-69745116 | MS.gene25880:intron |
| ACTTGGTTGTCGGATTAATA+TGG | 0.269492 | 3.2:-69745086 | MS.gene25880:CDS |
| CAGACGAGATTATGCGATTC+AGG | 0.269791 | 3.2:+69745876 | None:intergenic |
| ATTTAAACAAGTGGTGGATT+TGG | 0.276380 | 3.2:-69748030 | MS.gene25880:CDS |
| GACTATTCCTCTGATTCTAA+TGG | 0.288487 | 3.2:-69749042 | MS.gene25880:CDS |
| GATTAATATGGATAGCATTC+AGG | 0.313276 | 3.2:-69745074 | MS.gene25880:intron |
| TTTGGGTTGTTGTGTTGTTA+TGG | 0.319434 | 3.2:-69748012 | MS.gene25880:CDS |
| GTTGATGATTTGTTGAATAA+GGG | 0.320022 | 3.2:-69748478 | MS.gene25880:CDS |
| GATCCAGTTAATCGCATTAT+TGG | 0.322404 | 3.2:-69745851 | MS.gene25880:CDS |
| TTTAAACAAGTGGTGGATTT+GGG | 0.330723 | 3.2:-69748029 | MS.gene25880:CDS |
| CTTCCAATAATGCGATTAAC+TGG | 0.332630 | 3.2:+69745848 | None:intergenic |
| TTATCAAAACTTGGTGATCT+TGG | 0.334643 | 3.2:-69748400 | MS.gene25880:intron |
| AAAATCTTTCCTTCCGATTC+CGG | 0.338690 | 3.2:+69748260 | None:intergenic |
| CTTCCGAAGAATTCTGCTTT+AGG | 0.344032 | 3.2:-69744566 | MS.gene25880:CDS |
| TTGATTCTGGCTCGAATACT+TGG | 0.368413 | 3.2:-69745103 | MS.gene25880:CDS |
| ACATCAGGCCCCATTTCTTT+GGG | 0.369952 | 3.2:+69744931 | None:intergenic |
| CTTACCATTGTAGATGTAAG+AGG | 0.378420 | 3.2:+69747978 | None:intergenic |
| TGTTAGAGCTGCTAAAAGTC+TGG | 0.379369 | 3.2:-69745616 | MS.gene25880:CDS |
| TTCAGGATTTATTTCCTTGA+GGG | 0.390450 | 3.2:-69744220 | None:intergenic |
| CGATTCAGGGATGATATAAC+AGG | 0.397208 | 3.2:+69745890 | None:intergenic |
| ACTATTCCTCTGATTCTAAT+GGG | 0.400587 | 3.2:-69749041 | MS.gene25880:CDS |
| AAGCTTGTATCCCAAAGAAA+TGG | 0.403295 | 3.2:-69744941 | MS.gene25880:CDS |
| ATACTCTTACTAGGGACATT+GGG | 0.405845 | 3.2:-69745684 | MS.gene25880:intron |
| GGACTCTGCTTGAGAGTTGT+GGG | 0.411485 | 3.2:-69748529 | MS.gene25880:CDS |
| AGCTTGTATCCCAAAGAAAT+GGG | 0.417096 | 3.2:-69744940 | MS.gene25880:CDS |
| CTTCCTAAAGCAGAATTCTT+CGG | 0.430180 | 3.2:+69744563 | None:intergenic |
| AACCAACCGCTTGTTATTCA+AGG | 0.432651 | 3.2:-69744299 | MS.gene25880:CDS |
| CCGCTTGTTATTCAAGGTGC+TGG | 0.439103 | 3.2:-69744293 | MS.gene25880:CDS |
| CCTCTGATTCTAATGGGTTG+TGG | 0.444812 | 3.2:-69749035 | MS.gene25880:CDS |
| GGGACTCTGCTTGAGAGTTG+TGG | 0.445062 | 3.2:-69748530 | MS.gene25880:CDS |
| TGCTTGAGAGTTGTGGGAGT+TGG | 0.449369 | 3.2:-69748523 | MS.gene25880:CDS |
| AGTATTTGTGCATCCGGAAT+CGG | 0.454900 | 3.2:-69748273 | MS.gene25880:CDS |
| ATGTCAAGTATTTGTGCATC+CGG | 0.460749 | 3.2:-69748279 | MS.gene25880:CDS |
| CTAATGGGTTGTGGAGGAGT+TGG | 0.462718 | 3.2:-69749026 | MS.gene25880:CDS |
| TGGCTCGAATACTTGGTTGT+CGG | 0.465975 | 3.2:-69745096 | MS.gene25880:CDS |
| GGCGACTCTTTATCAAAACT+TGG | 0.468528 | 3.2:-69748409 | MS.gene25880:CDS |
| TGGAATGGATGTTGCTAGAA+AGG | 0.469655 | 3.2:-69745434 | MS.gene25880:intron |
| CTGAATCGCATAATCTCGTC+TGG | 0.472188 | 3.2:-69745875 | MS.gene25880:CDS |
| GTTATTCAAGGTGCTGGAGC+TGG | 0.472892 | 3.2:-69744287 | MS.gene25880:CDS |
| TCTGCTTTAGGAAGATTAAG+AGG | 0.483155 | 3.2:-69744554 | MS.gene25880:CDS |
| CGCATTATTGGAAGTTTGAG+TGG | 0.502100 | 3.2:-69745839 | MS.gene25880:intron |
| CGATATGTCTGTGTCATTGA+GGG | 0.505166 | 3.2:-69744811 | MS.gene25880:CDS |
| GTTAGAGCTGCTAAAAGTCT+GGG | 0.506073 | 3.2:-69745615 | MS.gene25880:CDS |
| TCATCAACAGTCATTACATC+AGG | 0.509894 | 3.2:+69744916 | None:intergenic |
| GTTGAGAAGGCAGCTTCAAA+CGG | 0.522134 | 3.2:-69744844 | MS.gene25880:CDS |
| TCGTTCTCTTCACTCTTCAC+AGG | 0.522889 | 3.2:-69748973 | MS.gene25880:intron |
| TGCTAGCTCTGACACTATAG+TGG | 0.526126 | 3.2:-69748054 | MS.gene25880:CDS |
| AACGACATGAGACGATGTGT+TGG | 0.528650 | 3.2:+69748991 | None:intergenic |
| CACTTACAGTTGACTCGTGT+CGG | 0.530019 | 3.2:+69747248 | None:intergenic |
| GGAAATGACACGACTGCAGC+TGG | 0.530672 | 3.2:-69744266 | MS.gene25880:CDS |
| CATACTCTTACTAGGGACAT+TGG | 0.534273 | 3.2:-69745685 | MS.gene25880:intron |
| AGACGAGATTATGCGATTCA+GGG | 0.536705 | 3.2:+69745877 | None:intergenic |
| TTGGAGATCGCATCTCAACT+TGG | 0.536979 | 3.2:-69748239 | MS.gene25880:CDS |
| GCAGATCCGCGTGACGACCT+TGG | 0.541256 | 3.2:-69745457 | MS.gene25880:intron |
| AGTTGGTGATAGTAAATCTC+TGG | 0.543805 | 3.2:-69748506 | MS.gene25880:CDS |
| GCGATATGTCTGTGTCATTG+AGG | 0.544430 | 3.2:-69744812 | MS.gene25880:CDS |
| TTGATGATTTGTTGAATAAG+GGG | 0.549072 | 3.2:-69748477 | MS.gene25880:CDS |
| CACCTTGAATAACAAGCGGT+TGG | 0.553741 | 3.2:+69744297 | None:intergenic |
| TATTCAAGAGAGAGTTGAGA+AGG | 0.555589 | 3.2:-69744857 | MS.gene25880:CDS |
| GCGTGACGACCTTGGTGGAA+TGG | 0.557142 | 3.2:-69745449 | MS.gene25880:CDS |
| ATTAAGAGGAAGTGATAATG+TGG | 0.560797 | 3.2:-69744540 | MS.gene25880:intron |
| ATTCAGGATTTATTTCCTTG+AGG | 0.563190 | 3.2:-69744221 | None:intergenic |
| AGTGGTATTTAAACAAGTGG+TGG | 0.565038 | 3.2:-69748036 | MS.gene25880:CDS |
| GAACTTTGTCGGCTCAAGCA+TGG | 0.577642 | 3.2:-69748433 | MS.gene25880:CDS |
| CTGATTCTAATGGGTTGTGG+AGG | 0.585102 | 3.2:-69749032 | MS.gene25880:CDS |
| GATCCGCGTGACGACCTTGG+TGG | 0.590453 | 3.2:-69745454 | MS.gene25880:CDS |
| CCACAACCCATTAGAATCAG+AGG | 0.599933 | 3.2:+69749035 | None:intergenic |
| TATAGTGGTATTTAAACAAG+TGG | 0.603886 | 3.2:-69748039 | MS.gene25880:CDS |
| TCTGTGTCATTGAGGGCCCA+AGG | 0.607852 | 3.2:-69744804 | MS.gene25880:intron |
| AGTCTGGGGTACACTGAACC+AGG | 0.614299 | 3.2:-69745600 | MS.gene25880:intron |
| GCTCTAACAACTTGGCTCAG+TGG | 0.629836 | 3.2:+69745630 | None:intergenic |
| TACTCTTACTAGGGACATTG+GGG | 0.630998 | 3.2:-69745683 | MS.gene25880:intron |
| GCTAGCAGTGCAATCGACAA+AGG | 0.639455 | 3.2:+69748070 | None:intergenic |
| AAAGCCTCTTACATCTACAA+TGG | 0.649979 | 3.2:-69747982 | MS.gene25880:intron |
| GTAATGAGTGAGGTTGAAGA+CGG | 0.653533 | 3.2:-69745657 | MS.gene25880:CDS |
| TGGTGATAGTAAATCTCTGG+TGG | 0.664687 | 3.2:-69748503 | MS.gene25880:CDS |
| TGGTGTCCTTGCTGATATCG+TGG | 0.665644 | 3.2:-69744246 | MS.gene25880:CDS |
| GACAGTTGGAAGTATACACT+CGG | 0.666254 | 3.2:-69744331 | MS.gene25880:intron |
| CCAGCACCTTGAATAACAAG+CGG | 0.667197 | 3.2:+69744293 | None:intergenic |
| ATGAGACGATGTGTTGGAGA+AGG | 0.674742 | 3.2:+69748997 | None:intergenic |
| CTTTGTCGGCTCAAGCATGG+TGG | 0.682934 | 3.2:-69748430 | MS.gene25880:CDS |
| TTAGAGCTGCTAAAAGTCTG+GGG | 0.687412 | 3.2:-69745614 | MS.gene25880:CDS |
| GAATATCCACGATATCAGCA+AGG | 0.690515 | 3.2:+69744240 | None:intergenic |
| GCTTGTATCCCAAAGAAATG+GGG | 0.691217 | 3.2:-69744939 | MS.gene25880:CDS |
| TTTGTGCATCCGGAATCGGA+AGG | 0.691255 | 3.2:-69748269 | MS.gene25880:CDS |
| GACTCGTGTCGGATACGACG+TGG | 0.702791 | 3.2:+69747259 | None:intergenic |
| ATTCCACCAAGGTCGTCACG+CGG | 0.703419 | 3.2:+69745451 | None:intergenic |
| ATTGGGGTACGTAATGAGTG+AGG | 0.705523 | 3.2:-69745667 | MS.gene25880:CDS |
| TAGCAACATCCATTCCACCA+AGG | 0.709532 | 3.2:+69745440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTACTTTTAAATTTG+TGG | - | chr3.2:69747766-69747785 | MS.gene25880:intron | 10.0% |
| !!! | TATAATGAAACTTTATTTTA+GGG | + | chr3.2:69745859-69745878 | None:intergenic | 10.0% |
| !!! | TTATAATGAAACTTTATTTT+AGG | + | chr3.2:69745860-69745879 | None:intergenic | 10.0% |
| !! | AAAATCAAAATCAGAAAAAA+GGG | - | chr3.2:69746514-69746533 | MS.gene25880:intron | 15.0% |
| !! | GAAGTTATAATTGATATAAA+AGG | + | chr3.2:69748648-69748667 | None:intergenic | 15.0% |
| !! | TAAAATCAAAATCAGAAAAA+AGG | - | chr3.2:69746513-69746532 | MS.gene25880:intron | 15.0% |
| !! | TGATTAAAGATTTATTAACA+AGG | - | chr3.2:69746066-69746085 | MS.gene25880:intron | 15.0% |
| !! | TTAAAATAGAACTCATATAT+TGG | + | chr3.2:69746542-69746561 | None:intergenic | 15.0% |
| !! | TTATCAATTGTAGTTTAAAA+TGG | - | chr3.2:69748090-69748109 | MS.gene25880:intron | 15.0% |
| !! | TTCATAATAATTGTTGAAAT+GGG | - | chr3.2:69745329-69745348 | MS.gene25880:intron | 15.0% |
| !! | TTTCATAATAATTGTTGAAA+TGG | - | chr3.2:69745328-69745347 | MS.gene25880:intron | 15.0% |
| !!! | ACAAAATTTATTACTTTTCT+TGG | - | chr3.2:69747187-69747206 | MS.gene25880:intron | 15.0% |
| !!! | AGTAAGAATTTTCAATAAAA+AGG | - | chr3.2:69746140-69746159 | MS.gene25880:intron | 15.0% |
| !!! | TATTATTTTTTTAACAGAAG+TGG | + | chr3.2:69747008-69747027 | None:intergenic | 15.0% |
| !!! | TTATTTTATTTTCTCGTTTT+TGG | - | chr3.2:69748758-69748777 | MS.gene25880:intron | 15.0% |
| !!! | TTGAATTTTGATTGTTATTT+TGG | - | chr3.2:69744711-69744730 | MS.gene25880:intron | 15.0% |
| !!! | TTTTGTTAGTTTTTTCATTA+TGG | - | chr3.2:69744576-69744595 | MS.gene25880:CDS | 15.0% |
| !! | AAAATGACTAACATAACATA+GGG | + | chr3.2:69748286-69748305 | None:intergenic | 20.0% |
| !! | AAATACGATAAATAAAGGAA+AGG | + | chr3.2:69748260-69748279 | None:intergenic | 20.0% |
| !! | ACTATTTGATTGTAATTGAA+AGG | - | chr3.2:69744965-69744984 | MS.gene25880:intron | 20.0% |
| !! | ATAAATCTTTAATCATGTTG+AGG | + | chr3.2:69746061-69746080 | None:intergenic | 20.0% |
| !! | ATTCTATCAAGTAAAAGATA+AGG | - | chr3.2:69745882-69745901 | MS.gene25880:CDS | 20.0% |
| !! | GGAAAAAATACGATAAATAA+AGG | + | chr3.2:69748265-69748284 | None:intergenic | 20.0% |
| !! | TAAAATGACTAACATAACAT+AGG | + | chr3.2:69748287-69748306 | None:intergenic | 20.0% |
| !! | TAAATAGTTACTGGTATTAT+TGG | - | chr3.2:69747131-69747150 | MS.gene25880:intron | 20.0% |
| !! | TATATCAACAGAAAATGAAA+TGG | + | chr3.2:69745563-69745582 | None:intergenic | 20.0% |
| !! | TCCATACATTATAAAGTTTA+AGG | + | chr3.2:69745529-69745548 | None:intergenic | 20.0% |
| !! | TCCTTAAACTTTATAATGTA+TGG | - | chr3.2:69745525-69745544 | MS.gene25880:intron | 20.0% |
| !! | TCTATGCAATAAAAACATAA+GGG | + | chr3.2:69747089-69747108 | None:intergenic | 20.0% |
| !! | TTGAAATTGCATTATTCAAT+GGG | - | chr3.2:69747709-69747728 | MS.gene25880:intron | 20.0% |
| !! | TTTCCTATCAAAATCTAATT+TGG | - | chr3.2:69747272-69747291 | MS.gene25880:CDS | 20.0% |
| !!! | AATACAAACTTTCTGTTTTT+TGG | - | chr3.2:69748124-69748143 | MS.gene25880:intron | 20.0% |
| !!! | ATACAAACTTTCTGTTTTTT+GGG | - | chr3.2:69748125-69748144 | MS.gene25880:intron | 20.0% |
| !!! | ATATCATGTTTTTTAAGCTT+CGG | - | chr3.2:69745604-69745623 | MS.gene25880:CDS | 20.0% |
| !!! | ATATCTGAAATTTTCATTGT+AGG | - | chr3.2:69745172-69745191 | MS.gene25880:intron | 20.0% |
| !!! | ATTTTGATTGTTATTTTGGT+TGG | - | chr3.2:69744715-69744734 | MS.gene25880:intron | 20.0% |
| !!! | GTTATGTTAGTCATTTTATA+TGG | - | chr3.2:69748289-69748308 | MS.gene25880:intron | 20.0% |
| !!! | TTTGAAATTGCATTATTCAA+TGG | - | chr3.2:69747708-69747727 | MS.gene25880:intron | 20.0% |
| ! | AAAATCTAAATGCATGTTCT+CGG | - | chr3.2:69746671-69746690 | MS.gene25880:intron | 25.0% |
| ! | AAACATGACCATAAATTAGA+GGG | + | chr3.2:69745480-69745499 | None:intergenic | 25.0% |
| ! | AATTCTTCCATTAAAGAACT+TGG | - | chr3.2:69746388-69746407 | MS.gene25880:intron | 25.0% |
| ! | AATTGAACACAGAATATGAA+GGG | + | chr3.2:69748506-69748525 | None:intergenic | 25.0% |
| ! | ATAATAATTGTTGAAATGGG+AGG | - | chr3.2:69745332-69745351 | MS.gene25880:intron | 25.0% |
| ! | ATGAGATGATAAATAGTTAC+TGG | - | chr3.2:69747122-69747141 | MS.gene25880:intron | 25.0% |
| ! | ATTTATGGTCATGTTTAGTT+TGG | - | chr3.2:69745484-69745503 | MS.gene25880:intron | 25.0% |
| ! | ATTTGCATCAACATACAAAA+TGG | + | chr3.2:69748919-69748938 | None:intergenic | 25.0% |
| ! | CATAATACCAAGTTCTTTAA+TGG | + | chr3.2:69746398-69746417 | None:intergenic | 25.0% |
| ! | CATTATATCTGTTTACTTTC+TGG | - | chr3.2:69746754-69746773 | MS.gene25880:intron | 25.0% |
| ! | CTCTATGCAATAAAAACATA+AGG | + | chr3.2:69747090-69747109 | None:intergenic | 25.0% |
| ! | CTGATGCATATATACAAATA+TGG | - | chr3.2:69746485-69746504 | MS.gene25880:intron | 25.0% |
| ! | GATTGAATTGAACATGAAAA+AGG | + | chr3.2:69748569-69748588 | None:intergenic | 25.0% |
| ! | TAAACATGACCATAAATTAG+AGG | + | chr3.2:69745481-69745500 | None:intergenic | 25.0% |
| ! | TATAGTGGTATTTAAACAAG+TGG | - | chr3.2:69745231-69745250 | MS.gene25880:intron | 25.0% |
| ! | TCTGTATTTAACTGTAATCT+CGG | - | chr3.2:69746211-69746230 | MS.gene25880:intron | 25.0% |
| ! | TTCAATCTTTGCATATGATT+TGG | - | chr3.2:69748582-69748601 | MS.gene25880:intron | 25.0% |
| ! | TTTGATACTAAAACGCAAAT+GGG | + | chr3.2:69744486-69744505 | None:intergenic | 25.0% |
| ! | TTTGATACTAGAAGACAAAT+GGG | + | chr3.2:69744415-69744434 | None:intergenic | 25.0% |
| !! | AAAATCTAATTTGGCTTCAT+GGG | - | chr3.2:69747281-69747300 | MS.gene25880:CDS | 25.0% |
| !! | AGGTATTGTTATGTTGATAT+TGG | - | chr3.2:69747551-69747570 | MS.gene25880:intron | 25.0% |
| !! | ATAAACTGCAAATTTGTTTC+TGG | - | chr3.2:69746166-69746185 | MS.gene25880:intron | 25.0% |
| !! | GAAGGAAATTTTTGAATTTG+AGG | - | chr3.2:69746439-69746458 | MS.gene25880:intron | 25.0% |
| !! | TAATCATTTTCTGACATTGA+TGG | - | chr3.2:69744661-69744680 | MS.gene25880:intron | 25.0% |
| !! | TCAATAGCTAGATGATTTTA+AGG | + | chr3.2:69744628-69744647 | None:intergenic | 25.0% |
| !! | TGAAATTTTCATTGTAGGTT+TGG | - | chr3.2:69745177-69745196 | MS.gene25880:intron | 25.0% |
| !! | TTGAAAAATCATGGATTTTG+AGG | - | chr3.2:69747308-69747327 | MS.gene25880:intron | 25.0% |
| !! | TTTTGATACTAAAACGCAAA+TGG | + | chr3.2:69744487-69744506 | None:intergenic | 25.0% |
| !! | TTTTGATACTAGAAGACAAA+TGG | + | chr3.2:69744416-69744435 | None:intergenic | 25.0% |
| !!! | AAGCCAAATTAGATTTTGAT+AGG | + | chr3.2:69747278-69747297 | None:intergenic | 25.0% |
| !!! | GGCGTTAAGTATTTTTAATT+AGG | - | chr3.2:69748779-69748798 | MS.gene25880:intron | 25.0% |
| !!! | GTTGATGATTTGTTGAATAA+GGG | - | chr3.2:69744792-69744811 | MS.gene25880:intron | 25.0% |
| !!! | GTTGTGATATTTTTAAAGGT+AGG | - | chr3.2:69747347-69747366 | MS.gene25880:intron | 25.0% |
| !!! | GTTTTTTGTTAGAACTTTGT+CGG | - | chr3.2:69744826-69744845 | MS.gene25880:CDS | 25.0% |
| !!! | TATGTTTTTATTGCATAGAG+AGG | - | chr3.2:69747090-69747109 | MS.gene25880:intron | 25.0% |
| !!! | TCTGGTTGTGATATTTTTAA+AGG | - | chr3.2:69747343-69747362 | MS.gene25880:intron | 25.0% |
| !!! | TTCAAAAGCACTCAATTTTA+TGG | + | chr3.2:69744696-69744715 | None:intergenic | 25.0% |
| !!! | TTGATGATTTGTTGAATAAG+GGG | - | chr3.2:69744793-69744812 | MS.gene25880:intron | 25.0% |
| AAAAAGATCTGCTAGTCAAA+TGG | + | chr3.2:69744558-69744577 | None:intergenic | 30.0% | |
| AAAAGATCTGCTAGTCAAAT+GGG | + | chr3.2:69744557-69744576 | None:intergenic | 30.0% | |
| AAAGATGAACTTGTACTGTA+CGG | + | chr3.2:69748870-69748889 | None:intergenic | 30.0% | |
| AACAATAACTCTCTCTTACA+TGG | - | chr3.2:69745956-69745975 | MS.gene25880:intron | 30.0% | |
| AACAATAGAACAAAGTAACG+TGG | + | chr3.2:69745920-69745939 | None:intergenic | 30.0% | |
| AACATGACCATAAATTAGAG+GGG | + | chr3.2:69745479-69745498 | None:intergenic | 30.0% | |
| AATTTACCCCCTCTAATTTA+TGG | - | chr3.2:69745469-69745488 | MS.gene25880:intron | 30.0% | |
| ACAATAGAACAAAGTAACGT+GGG | + | chr3.2:69745919-69745938 | None:intergenic | 30.0% | |
| ACGATAAATAAAGGAAAGGT+AGG | + | chr3.2:69748256-69748275 | None:intergenic | 30.0% | |
| ACTATTCCTCTGATTCTAAT+GGG | - | chr3.2:69744229-69744248 | MS.gene25880:CDS | 30.0% | |
| AGTGAAATCTAATACTTCCT+CGG | - | chr3.2:69746943-69746962 | MS.gene25880:intron | 30.0% | |
| ATGGGGATATTGAAAAATCA+TGG | - | chr3.2:69747299-69747318 | MS.gene25880:intron | 30.0% | |
| ATTGTGTAGCAATTAGCAAA+TGG | + | chr3.2:69747737-69747756 | None:intergenic | 30.0% | |
| ATTTCATTCCTTGTCTACTA+AGG | + | chr3.2:69746317-69746336 | None:intergenic | 30.0% | |
| CTTGATCACATATTCATTGT+TGG | - | chr3.2:69747508-69747527 | MS.gene25880:intron | 30.0% | |
| GAATTGAACACAGAATATGA+AGG | + | chr3.2:69748507-69748526 | None:intergenic | 30.0% | |
| GACTGTATTAAAAGAAAGTG+TGG | - | chr3.2:69746105-69746124 | MS.gene25880:intron | 30.0% | |
| GATTAATATGGATAGCATTC+AGG | - | chr3.2:69748196-69748215 | MS.gene25880:intron | 30.0% | |
| GTCATCTTCATCTAGAAATA+AGG | - | chr3.2:69746417-69746436 | MS.gene25880:intron | 30.0% | |
| GTGTGTATGAAAAATTGCTT+AGG | - | chr3.2:69745145-69745164 | MS.gene25880:intron | 30.0% | |
| GTGTTGTATGGATCTATAAT+CGG | - | chr3.2:69746268-69746287 | MS.gene25880:intron | 30.0% | |
| GTTTAAATCAACTCTTTCCT+CGG | - | chr3.2:69746801-69746820 | MS.gene25880:intron | 30.0% | |
| TAGACAAGGAATGAAATCTA+GGG | - | chr3.2:69746320-69746339 | MS.gene25880:intron | 30.0% | |
| TAGTTGACCATTTCTTATCA+CGG | - | chr3.2:69748028-69748047 | MS.gene25880:CDS | 30.0% | |
| TATTCTGCATACTCTTACTA+GGG | - | chr3.2:69747578-69747597 | MS.gene25880:intron | 30.0% | |
| TCTTCATCTAGAAATAAGGA+AGG | - | chr3.2:69746421-69746440 | MS.gene25880:intron | 30.0% | |
| TGTGCATGTCAAAAAGTTTA+TGG | - | chr3.2:69745762-69745781 | MS.gene25880:intron | 30.0% | |
| TGTTAGCAAATTTATGCGTT+GGG | - | chr3.2:69747944-69747963 | MS.gene25880:intron | 30.0% | |
| TTATTCTGCATACTCTTACT+AGG | - | chr3.2:69747577-69747596 | MS.gene25880:intron | 30.0% | |
| ! | AAATCTAATTTGGCTTCATG+GGG | - | chr3.2:69747282-69747301 | MS.gene25880:CDS | 30.0% |
| ! | AGGATTTTTGTCCATTTTAG+AGG | - | chr3.2:69748799-69748818 | MS.gene25880:intron | 30.0% |
| ! | ATTAAGAGGAAGTGATAATG+TGG | - | chr3.2:69748730-69748749 | MS.gene25880:intron | 30.0% |
| ! | CAAAATCTAATTTGGCTTCA+TGG | - | chr3.2:69747280-69747299 | MS.gene25880:CDS | 30.0% |
| ! | TTATCAAAACTTGGTGATCT+TGG | - | chr3.2:69744870-69744889 | MS.gene25880:CDS | 30.0% |
| ! | TTTGGGCTAATATTTGAAAC+AGG | - | chr3.2:69748142-69748161 | MS.gene25880:intron | 30.0% |
| ! | TTTTCAGCGAATTTCAAGAT+TGG | + | chr3.2:69745671-69745690 | None:intergenic | 30.0% |
| !! | ACACAGTTTTGCTCTTATTT+AGG | + | chr3.2:69745129-69745148 | None:intergenic | 30.0% |
| !! | ATAACTTCTCTCCTTTTTCA+AGG | - | chr3.2:69748660-69748679 | MS.gene25880:intron | 30.0% |
| !! | ATATTTTTAAAGGTAGGTGC+TGG | - | chr3.2:69747353-69747372 | MS.gene25880:intron | 30.0% |
| !! | ATTTAAACAAGTGGTGGATT+TGG | - | chr3.2:69745240-69745259 | MS.gene25880:intron | 30.0% |
| !! | CAGTTTCGAAGTTTTGATAT+TGG | - | chr3.2:69747990-69748009 | MS.gene25880:CDS | 30.0% |
| !! | CGTTGATGATTTGTTGAATA+AGG | - | chr3.2:69744791-69744810 | MS.gene25880:intron | 30.0% |
| !! | CTTTAAAGCGACAACTAAAA+AGG | - | chr3.2:69747229-69747248 | MS.gene25880:intron | 30.0% |
| !! | GTTTCTGGAATTTCTTTGAT+TGG | - | chr3.2:69746181-69746200 | MS.gene25880:intron | 30.0% |
| !! | TATTTTTAAAGGTAGGTGCT+GGG | - | chr3.2:69747354-69747373 | MS.gene25880:intron | 30.0% |
| !! | TTTAAACAAGTGGTGGATTT+GGG | - | chr3.2:69745241-69745260 | MS.gene25880:intron | 30.0% |
| AAAAGTAGCTGTCAATAACC+TGG | + | chr3.2:69747691-69747710 | None:intergenic | 35.0% | |
| AAAATCTTTCCTTCCGATTC+CGG | + | chr3.2:69745013-69745032 | None:intergenic | 35.0% | |
| AAAGCCTCTTACATCTACAA+TGG | - | chr3.2:69745288-69745307 | MS.gene25880:intron | 35.0% | |
| AACAATACCTTACACTTACG+TGG | + | chr3.2:69747541-69747560 | None:intergenic | 35.0% | |
| AACACATCCAGAACTTATAC+AGG | + | chr3.2:69746253-69746272 | None:intergenic | 35.0% | |
| AAGCTTGTATCCCAAAGAAA+TGG | - | chr3.2:69748329-69748348 | MS.gene25880:intron | 35.0% | |
| AATTCAGACCTTAGTAGACA+AGG | - | chr3.2:69746306-69746325 | MS.gene25880:intron | 35.0% | |
| AATTGTTGAAATGGGAGGTT+AGG | - | chr3.2:69745337-69745356 | MS.gene25880:intron | 35.0% | |
| ACAGTACAAGTTCATCTTTC+TGG | - | chr3.2:69748871-69748890 | MS.gene25880:intron | 35.0% | |
| ACATGACCATAAATTAGAGG+GGG | + | chr3.2:69745478-69745497 | None:intergenic | 35.0% | |
| ACTTGGTTGTCGGATTAATA+TGG | - | chr3.2:69748184-69748203 | MS.gene25880:intron | 35.0% | |
| AGAGAGTTATTGTTTAGACG+AGG | + | chr3.2:69745950-69745969 | None:intergenic | 35.0% | |
| AGCTCACAAATCTGTATCAT+TGG | - | chr3.2:69747917-69747936 | MS.gene25880:intron | 35.0% | |
| AGCTTGTATCCCAAAGAAAT+GGG | - | chr3.2:69748330-69748349 | MS.gene25880:intron | 35.0% | |
| AGTGGTATTTAAACAAGTGG+TGG | - | chr3.2:69745234-69745253 | MS.gene25880:intron | 35.0% | |
| AGTTGACCATTTCTTATCAC+GGG | - | chr3.2:69748029-69748048 | MS.gene25880:CDS | 35.0% | |
| ATACTCTTACTAGGGACATT+GGG | - | chr3.2:69747586-69747605 | MS.gene25880:intron | 35.0% | |
| ATGTCAAGTATTTGTGCATC+CGG | - | chr3.2:69744991-69745010 | MS.gene25880:intron | 35.0% | |
| ATGTTGATGCAAATGACAGT+TGG | - | chr3.2:69748925-69748944 | MS.gene25880:intron | 35.0% | |
| CTTACCATTGTAGATGTAAG+AGG | + | chr3.2:69745295-69745314 | None:intergenic | 35.0% | |
| CTTCCAATAATGCGATTAAC+TGG | + | chr3.2:69747425-69747444 | None:intergenic | 35.0% | |
| CTTCCTAAAGCAGAATTCTT+CGG | + | chr3.2:69748710-69748729 | None:intergenic | 35.0% | |
| GACTATTCCTCTGATTCTAA+TGG | - | chr3.2:69744228-69744247 | MS.gene25880:CDS | 35.0% | |
| GATCCAGTTAATCGCATTAT+TGG | - | chr3.2:69747419-69747438 | MS.gene25880:intron | 35.0% | |
| GGAGGAAACAAATATACCTT+GGG | + | chr3.2:69748485-69748504 | None:intergenic | 35.0% | |
| GTAGACAAGGAATGAAATCT+AGG | - | chr3.2:69746319-69746338 | MS.gene25880:intron | 35.0% | |
| GTGTTAGCAAATTTATGCGT+TGG | - | chr3.2:69747943-69747962 | MS.gene25880:intron | 35.0% | |
| TATGGCATTGCTTGTTTCAA+AGG | - | chr3.2:69745780-69745799 | MS.gene25880:intron | 35.0% | |
| TATTCAAGAGAGAGTTGAGA+AGG | - | chr3.2:69748413-69748432 | MS.gene25880:CDS | 35.0% | |
| TATTGCATAGAGAGGAATGA+TGG | - | chr3.2:69747098-69747117 | MS.gene25880:intron | 35.0% | |
| TCATATGATCCTTCTTGAAG+TGG | - | chr3.2:69745639-69745658 | MS.gene25880:CDS | 35.0% | |
| TCATCAACAGTCATTACATC+AGG | + | chr3.2:69748357-69748376 | None:intergenic | 35.0% | |
| TCTCAACTTGGTAAAAAGAC+AGG | - | chr3.2:69745043-69745062 | MS.gene25880:intron | 35.0% | |
| TGAAACCAATCACATTAAGC+AGG | + | chr3.2:69745098-69745117 | None:intergenic | 35.0% | |
| TTCCTTAGACCATCTACAAT+GGG | - | chr3.2:69746966-69746985 | MS.gene25880:intron | 35.0% | |
| ! | AACTTATACAGGCTCTAGTT+TGG | + | chr3.2:69746242-69746261 | None:intergenic | 35.0% |
| ! | GAAAGAAACCATTTTGTGCA+AGG | + | chr3.2:69748830-69748849 | None:intergenic | 35.0% |
| ! | GATACAGATTTGTGAGCTTT+TGG | + | chr3.2:69747915-69747934 | None:intergenic | 35.0% |
| ! | TGTATAATCAACTGATTCCG+AGG | + | chr3.2:69746821-69746840 | None:intergenic | 35.0% |
| ! | TTTGAAACAGGCTTTGATTC+TGG | - | chr3.2:69748154-69748173 | MS.gene25880:intron | 35.0% |
| !! | AACAAGGTATTGCAAAGAGA+TGG | - | chr3.2:69746082-69746101 | MS.gene25880:intron | 35.0% |
| !! | ACAAGGTATTGCAAAGAGAT+GGG | - | chr3.2:69746083-69746102 | MS.gene25880:intron | 35.0% |
| !! | AGTTGGTGATAGTAAATCTC+TGG | - | chr3.2:69744764-69744783 | MS.gene25880:intron | 35.0% |
| !! | TAAGTTCTGGATGTGTTGTA+TGG | - | chr3.2:69746256-69746275 | MS.gene25880:intron | 35.0% |
| !! | TCTGCTTTAGGAAGATTAAG+AGG | - | chr3.2:69748716-69748735 | MS.gene25880:intron | 35.0% |
| !! | TTTGGGTTGTTGTGTTGTTA+TGG | - | chr3.2:69745258-69745277 | MS.gene25880:intron | 35.0% |
| !! | TTTTAGCAGCTCTAACAACT+TGG | + | chr3.2:69747651-69747670 | None:intergenic | 35.0% |
| !! | TTTTTAAGCTTCGGCATCAA+TGG | - | chr3.2:69745613-69745632 | MS.gene25880:CDS | 35.0% |
| !!! | GATTGTTATTTTGGTTGGCA+GGG | - | chr3.2:69744720-69744739 | MS.gene25880:intron | 35.0% |
| !!! | TGATTGTTATTTTGGTTGGC+AGG | - | chr3.2:69744719-69744738 | MS.gene25880:intron | 35.0% |
| AAAGGAGAAAACCATGTGTG+TGG | + | chr3.2:69748551-69748570 | None:intergenic | 40.0% | |
| AACAGAAGTGGCAAGTAACT+AGG | + | chr3.2:69746996-69747015 | None:intergenic | 40.0% | |
| AACTCTCTCTTACATGGAAC+AGG | - | chr3.2:69745962-69745981 | MS.gene25880:intron | 40.0% | |
| AATCAACCCCCTTTAACCTA+GGG | + | chr3.2:69745828-69745847 | None:intergenic | 40.0% | |
| ACTAGAGCCTGTATAAGTTC+TGG | - | chr3.2:69746243-69746262 | MS.gene25880:intron | 40.0% | |
| AGACGAGATTATGCGATTCA+GGG | + | chr3.2:69747396-69747415 | None:intergenic | 40.0% | |
| AGTATTTGTGCATCCGGAAT+CGG | - | chr3.2:69744997-69745016 | MS.gene25880:intron | 40.0% | |
| AGTTATTGTTTAGACGAGGC+AGG | + | chr3.2:69745946-69745965 | None:intergenic | 40.0% | |
| CATACTCTTACTAGGGACAT+TGG | - | chr3.2:69747585-69747604 | MS.gene25880:intron | 40.0% | |
| CCAACTTCACACCTTGAAAA+AGG | + | chr3.2:69748674-69748693 | None:intergenic | 40.0% | |
| CGATTCAGGGATGATATAAC+AGG | + | chr3.2:69747383-69747402 | None:intergenic | 40.0% | |
| CGCATTATTGGAAGTTTGAG+TGG | - | chr3.2:69747431-69747450 | MS.gene25880:intron | 40.0% | |
| CTAAGACAAGCTAAACAAGC+TGG | + | chr3.2:69744908-69744927 | None:intergenic | 40.0% | |
| CTTCCGAAGAATTCTGCTTT+AGG | - | chr3.2:69748704-69748723 | MS.gene25880:intron | 40.0% | |
| GAATATCCACGATATCAGCA+AGG | + | chr3.2:69749033-69749052 | None:intergenic | 40.0% | |
| GAATGACCCGTGATAAGAAA+TGG | + | chr3.2:69748038-69748057 | None:intergenic | 40.0% | |
| GCTTGTATCCCAAAGAAATG+GGG | - | chr3.2:69748331-69748350 | MS.gene25880:intron | 40.0% | |
| GGCACTTGATACATTCTAGA+AGG | - | chr3.2:69745431-69745450 | MS.gene25880:intron | 40.0% | |
| GGCGACTCTTTATCAAAACT+TGG | - | chr3.2:69744861-69744880 | MS.gene25880:CDS | 40.0% | |
| GGGAGGAAACAAATATACCT+TGG | + | chr3.2:69748486-69748505 | None:intergenic | 40.0% | |
| GGTAAAAAGACAGGTGTGTT+GGG | - | chr3.2:69745052-69745071 | MS.gene25880:intron | 40.0% | |
| GTAATGAGTGAGGTTGAAGA+CGG | - | chr3.2:69747613-69747632 | MS.gene25880:intron | 40.0% | |
| GTTAGAGCTGCTAAAAGTCT+GGG | - | chr3.2:69747655-69747674 | MS.gene25880:intron | 40.0% | |
| GTTCCTTAGACCATCTACAA+TGG | - | chr3.2:69746965-69746984 | MS.gene25880:intron | 40.0% | |
| TAATCAACCCCCTTTAACCT+AGG | + | chr3.2:69745829-69745848 | None:intergenic | 40.0% | |
| TACTCTTACTAGGGACATTG+GGG | - | chr3.2:69747587-69747606 | MS.gene25880:intron | 40.0% | |
| TAGAATGTATCAAGTGCCAC+TGG | + | chr3.2:69745429-69745448 | None:intergenic | 40.0% | |
| TCCTTAGACCATCTACAATG+GGG | - | chr3.2:69746967-69746986 | MS.gene25880:intron | 40.0% | |
| TGAACACAGAATATGAAGGG+AGG | + | chr3.2:69748503-69748522 | None:intergenic | 40.0% | |
| TGCTGATATCGTGGATATTC+AGG | - | chr3.2:69749033-69749052 | MS.gene25880:CDS | 40.0% | |
| TGGAAAAGTCCACTTCAAGA+AGG | + | chr3.2:69745651-69745670 | None:intergenic | 40.0% | |
| TGGAATGGATGTTGCTAGAA+AGG | - | chr3.2:69747836-69747855 | MS.gene25880:intron | 40.0% | |
| TGGTAAAAAGACAGGTGTGT+TGG | - | chr3.2:69745051-69745070 | MS.gene25880:intron | 40.0% | |
| TGGTGATAGTAAATCTCTGG+TGG | - | chr3.2:69744767-69744786 | MS.gene25880:intron | 40.0% | |
| TGTTAGAGCTGCTAAAAGTC+TGG | - | chr3.2:69747654-69747673 | MS.gene25880:intron | 40.0% | |
| TTAGAGCTGCTAAAAGTCTG+GGG | - | chr3.2:69747656-69747675 | MS.gene25880:intron | 40.0% | |
| ! | CGATATGTCTGTGTCATTGA+GGG | - | chr3.2:69748459-69748478 | MS.gene25880:CDS | 40.0% |
| ! | GACAGTTGGAAGTATACACT+CGG | - | chr3.2:69748939-69748958 | MS.gene25880:intron | 40.0% |
| ! | GGAATCGGAAGGAAAGATTT+TGG | - | chr3.2:69745012-69745031 | MS.gene25880:intron | 40.0% |
| ! | TGTGAGCTTTTGGATAAAGC+AGG | + | chr3.2:69747905-69747924 | None:intergenic | 40.0% |
| !! | AACCAACCGCTTGTTATTCA+AGG | - | chr3.2:69748971-69748990 | MS.gene25880:intron | 40.0% |
| !! | TTGATTCTGGCTCGAATACT+TGG | - | chr3.2:69748167-69748186 | MS.gene25880:intron | 40.0% |
| !!! | CCTTTTTCAAGGTGTGAAGT+TGG | - | chr3.2:69748671-69748690 | MS.gene25880:intron | 40.0% |
| !!! | GTTGATGACTTTTTGAGACG+TGG | - | chr3.2:69748369-69748388 | MS.gene25880:intron | 40.0% |
| AACGACATGAGACGATGTGT+TGG | + | chr3.2:69744282-69744301 | None:intergenic | 45.0% | |
| ACAAGACCCTAGGTTAAAGG+GGG | - | chr3.2:69745819-69745838 | MS.gene25880:intron | 45.0% | |
| ACATCAGGCCCCATTTCTTT+GGG | + | chr3.2:69748342-69748361 | None:intergenic | 45.0% | |
| AGGCTTGACCTTGCACAAAA+TGG | - | chr3.2:69748819-69748838 | MS.gene25880:intron | 45.0% | |
| ATGAGACGATGTGTTGGAGA+AGG | + | chr3.2:69744276-69744295 | None:intergenic | 45.0% | |
| ATTGGGGTACGTAATGAGTG+AGG | - | chr3.2:69747603-69747622 | MS.gene25880:intron | 45.0% | |
| CACAAGACCCTAGGTTAAAG+GGG | - | chr3.2:69745818-69745837 | MS.gene25880:intron | 45.0% | |
| CACCTTGAATAACAAGCGGT+TGG | + | chr3.2:69748976-69748995 | None:intergenic | 45.0% | |
| CAGACGAGATTATGCGATTC+AGG | + | chr3.2:69747397-69747416 | None:intergenic | 45.0% | |
| CAGCACCTGCTTAATGTGAT+TGG | - | chr3.2:69745090-69745109 | MS.gene25880:CDS | 45.0% | |
| CAGTCTTCCACGTAAGTGTA+AGG | - | chr3.2:69747531-69747550 | MS.gene25880:intron | 45.0% | |
| CCACAACCCATTAGAATCAG+AGG | + | chr3.2:69744238-69744257 | None:intergenic | 45.0% | |
| CCAGCACCTTGAATAACAAG+CGG | + | chr3.2:69748980-69748999 | None:intergenic | 45.0% | |
| CCTTAGACCATCTACAATGG+GGG | - | chr3.2:69746968-69746987 | MS.gene25880:intron | 45.0% | |
| CGTTATCCTCTTGAAACCAG+TGG | - | chr3.2:69745410-69745429 | MS.gene25880:intron | 45.0% | |
| CTGAATCGCATAATCTCGTC+TGG | - | chr3.2:69747395-69747414 | MS.gene25880:intron | 45.0% | |
| CTTAGACCATCTACAATGGG+GGG | - | chr3.2:69746969-69746988 | MS.gene25880:intron | 45.0% | |
| GCACAAGACCCTAGGTTAAA+GGG | - | chr3.2:69745817-69745836 | MS.gene25880:intron | 45.0% | |
| GTTGAGAAGGCAGCTTCAAA+CGG | - | chr3.2:69748426-69748445 | MS.gene25880:CDS | 45.0% | |
| TACATCAGGCCCCATTTCTT+TGG | + | chr3.2:69748343-69748362 | None:intergenic | 45.0% | |
| TAGCAACATCCATTCCACCA+AGG | + | chr3.2:69747833-69747852 | None:intergenic | 45.0% | |
| TCGTTCTCTTCACTCTTCAC+AGG | - | chr3.2:69744297-69744316 | MS.gene25880:CDS | 45.0% | |
| TCTCTCTTACATGGAACAGG+AGG | - | chr3.2:69745965-69745984 | MS.gene25880:intron | 45.0% | |
| TGCACAAGACCCTAGGTTAA+AGG | - | chr3.2:69745816-69745835 | MS.gene25880:intron | 45.0% | |
| TGGCTCGAATACTTGGTTGT+CGG | - | chr3.2:69748174-69748193 | MS.gene25880:intron | 45.0% | |
| TTGGAGATCGCATCTCAACT+TGG | - | chr3.2:69745031-69745050 | MS.gene25880:intron | 45.0% | |
| TTGTCACACTTCCACACACA+TGG | - | chr3.2:69748537-69748556 | MS.gene25880:intron | 45.0% | |
| ! | GCAAGGTCAAGCCTCTAAAA+TGG | + | chr3.2:69748813-69748832 | None:intergenic | 45.0% |
| ! | GCGATATGTCTGTGTCATTG+AGG | - | chr3.2:69748458-69748477 | MS.gene25880:CDS | 45.0% |
| ! | GGGTCATTCTGCACTACTTT+TGG | - | chr3.2:69748049-69748068 | MS.gene25880:CDS | 45.0% |
| ! | TTGAGGAGCTTTGACTGATC+TGG | - | chr3.2:69747325-69747344 | MS.gene25880:intron | 45.0% |
| !! | CACTTACAGTTGACTCGTGT+CGG | + | chr3.2:69746025-69746044 | None:intergenic | 45.0% |
| !! | CCTCTGATTCTAATGGGTTG+TGG | - | chr3.2:69744235-69744254 | MS.gene25880:CDS | 45.0% |
| !! | CTGATTCTAATGGGTTGTGG+AGG | - | chr3.2:69744238-69744257 | MS.gene25880:CDS | 45.0% |
| !! | TGCTAGCTCTGACACTATAG+TGG | - | chr3.2:69745216-69745235 | MS.gene25880:intron | 45.0% |
| !! | AATGATTAATTAAAAAATAA+TGG | + | chr3.2:69746738-69746757 | None:intergenic | 5.0% |
| !!! | ATAAATTTTGTTATTTTTTA+TGG | + | chr3.2:69747178-69747197 | None:intergenic | 5.0% |
| ACTGAAGTGCACAAGACCCT+AGG | - | chr3.2:69745809-69745828 | MS.gene25880:intron | 50.0% | |
| CCCCCATTGTAGATGGTCTA+AGG | + | chr3.2:69746971-69746990 | None:intergenic | 50.0% | |
| GCAAATTTATGCGTTGGGCG+TGG | - | chr3.2:69747949-69747968 | MS.gene25880:intron | 50.0% | |
| GCTAGCAGTGCAATCGACAA+AGG | + | chr3.2:69745203-69745222 | None:intergenic | 50.0% | |
| GCTCTAACAACTTGGCTCAG+TGG | + | chr3.2:69747643-69747662 | None:intergenic | 50.0% | |
| GGACTCTGCTTGAGAGTTGT+GGG | - | chr3.2:69744741-69744760 | MS.gene25880:intron | 50.0% | |
| GTAGATGGTCTAAGGAACCG+AGG | + | chr3.2:69746963-69746982 | None:intergenic | 50.0% | |
| TGCTTGAGAGTTGTGGGAGT+TGG | - | chr3.2:69744747-69744766 | MS.gene25880:intron | 50.0% | |
| TGGTGTCCTTGCTGATATCG+TGG | - | chr3.2:69749024-69749043 | MS.gene25880:CDS | 50.0% | |
| TTTGTGCATCCGGAATCGGA+AGG | - | chr3.2:69745001-69745020 | MS.gene25880:intron | 50.0% | |
| !! | CAAGTGCCACTGGTTTCAAG+AGG | + | chr3.2:69745419-69745438 | None:intergenic | 50.0% |
| !! | CCGCTTGTTATTCAAGGTGC+TGG | - | chr3.2:69748977-69748996 | MS.gene25880:CDS | 50.0% |
| !! | CTAATGGGTTGTGGAGGAGT+TGG | - | chr3.2:69744244-69744263 | MS.gene25880:CDS | 50.0% |
| !! | GAACTTTGTCGGCTCAAGCA+TGG | - | chr3.2:69744837-69744856 | MS.gene25880:CDS | 50.0% |
| !! | GTTATTCAAGGTGCTGGAGC+TGG | - | chr3.2:69748983-69749002 | MS.gene25880:CDS | 50.0% |
| ATGCGTTGGGCGTGGCTAAT+GGG | - | chr3.2:69747957-69747976 | MS.gene25880:intron | 55.0% | |
| ATTCCACCAAGGTCGTCACG+CGG | + | chr3.2:69747822-69747841 | None:intergenic | 55.0% | |
| CTAGGACCCCCCATTGTAGA+TGG | + | chr3.2:69746978-69746997 | None:intergenic | 55.0% | |
| GGAAATGACACGACTGCAGC+TGG | - | chr3.2:69749004-69749023 | MS.gene25880:CDS | 55.0% | |
| GGGACTCTGCTTGAGAGTTG+TGG | - | chr3.2:69744740-69744759 | MS.gene25880:intron | 55.0% | |
| TATGCGTTGGGCGTGGCTAA+TGG | - | chr3.2:69747956-69747975 | MS.gene25880:intron | 55.0% | |
| ! | AGTCTGGGGTACACTGAACC+AGG | - | chr3.2:69747670-69747689 | MS.gene25880:intron | 55.0% |
| ! | TCTGTGTCATTGAGGGCCCA+AGG | - | chr3.2:69748466-69748485 | MS.gene25880:CDS | 55.0% |
| !! | CTTTGTCGGCTCAAGCATGG+TGG | - | chr3.2:69744840-69744859 | MS.gene25880:CDS | 55.0% |
| GACTCGTGTCGGATACGACG+TGG | + | chr3.2:69746014-69746033 | None:intergenic | 60.0% | |
| GCGTGACGACCTTGGTGGAA+TGG | - | chr3.2:69747821-69747840 | MS.gene25880:intron | 60.0% | |
| TGCGTTGGGCGTGGCTAATG+GGG | - | chr3.2:69747958-69747977 | MS.gene25880:intron | 60.0% | |
| GATCCGCGTGACGACCTTGG+TGG | - | chr3.2:69747816-69747835 | MS.gene25880:intron | 65.0% | |
| GCAGATCCGCGTGACGACCT+TGG | - | chr3.2:69747813-69747832 | MS.gene25880:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69744223 | 69749069 | 69744223 | ID=MS.gene25880 |
| chr3.2 | mRNA | 69744223 | 69749069 | 69744223 | ID=MS.gene25880.t1;Parent=MS.gene25880 |
| chr3.2 | exon | 69748974 | 69749069 | 69748974 | ID=MS.gene25880.t1.exon1;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69748974 | 69749069 | 69748974 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69748401 | 69748551 | 69748401 | ID=MS.gene25880.t1.exon2;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69748401 | 69748551 | 69748401 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69748228 | 69748305 | 69748228 | ID=MS.gene25880.t1.exon3;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69748228 | 69748305 | 69748228 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69747983 | 69748098 | 69747983 | ID=MS.gene25880.t1.exon4;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69747983 | 69748098 | 69747983 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69747255 | 69747308 | 69747255 | ID=MS.gene25880.t1.exon5;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69747255 | 69747308 | 69747255 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69745840 | 69745927 | 69745840 | ID=MS.gene25880.t1.exon6;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69745840 | 69745927 | 69745840 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69745601 | 69745693 | 69745601 | ID=MS.gene25880.t1.exon7;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69745601 | 69745693 | 69745601 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69745435 | 69745475 | 69745435 | ID=MS.gene25880.t1.exon8;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69745435 | 69745475 | 69745435 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69745075 | 69745128 | 69745075 | ID=MS.gene25880.t1.exon9;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69745075 | 69745128 | 69745075 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69744805 | 69744968 | 69744805 | ID=MS.gene25880.t1.exon10;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69744805 | 69744968 | 69744805 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69744541 | 69744610 | 69744541 | ID=MS.gene25880.t1.exon11;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69744541 | 69744610 | 69744541 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| chr3.2 | exon | 69744223 | 69744348 | 69744223 | ID=MS.gene25880.t1.exon12;Parent=MS.gene25880.t1 |
| chr3.2 | CDS | 69744223 | 69744348 | 69744223 | ID=cds.MS.gene25880.t1;Parent=MS.gene25880.t1 |
| Gene Sequence |
| Protein sequence |
