AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060619


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060619.t1 MTR_2g076960 99.240 263 2 0 1 263 1 263 0.0 538
MS.gene060619.t1 MTR_8g086270 80.315 254 49 1 3 255 2 255 1.36e-153 428
MS.gene060619.t1 MTR_2g091225 77.692 260 56 2 1 259 1 259 1.09e-152 426
MS.gene060619.t1 MTR_2g015980 78.279 244 51 2 9 251 6 248 9.34e-145 406
MS.gene060619.t1 MTR_4g083060 72.797 261 71 0 3 263 2 262 1.22e-139 394
MS.gene060619.t1 MTR_5g044160 75.519 241 59 0 8 248 7 247 1.67e-138 390
MS.gene060619.t1 MTR_2g091225 77.021 235 53 1 26 259 2 236 2.40e-138 389
MS.gene060619.t1 MTR_5g064580 66.923 260 83 2 1 258 1 259 2.53e-125 357
MS.gene060619.t1 MTR_3g099380 66.667 255 83 1 1 253 1 255 4.10e-123 351
MS.gene060619.t1 MTR_3g100620 65.106 235 79 1 8 239 11 245 4.18e-110 318
MS.gene060619.t1 MTR_3g099380 65.517 203 68 1 1 201 1 203 4.05e-93 273
MS.gene060619.t1 MTR_0137s0020 50.638 235 108 4 8 238 11 241 5.90e-72 221
MS.gene060619.t1 MTR_3g014060 50.213 235 109 4 8 238 11 241 4.22e-71 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060619.t1 AT2G42590 74.409 254 64 1 8 260 7 260 9.31e-142 399
MS.gene060619.t1 AT2G42590 74.118 255 64 1 8 260 7 261 4.33e-141 397
MS.gene060619.t1 AT2G42590 74.118 255 64 1 8 260 7 261 4.94e-141 397
MS.gene060619.t1 AT1G26480 77.542 236 53 0 8 243 10 245 2.95e-140 395
MS.gene060619.t1 AT1G34760 75.620 242 59 0 6 247 3 244 1.16e-138 390
MS.gene060619.t1 AT1G34760 75.620 242 59 0 6 247 3 244 1.56e-138 390
MS.gene060619.t1 AT1G22300 73.622 254 65 2 6 259 3 254 1.47e-134 380
MS.gene060619.t1 AT1G22300 75.519 241 59 0 6 246 3 243 1.81e-134 380
MS.gene060619.t1 AT1G22300 76.471 238 56 0 6 243 3 240 1.13e-133 377
MS.gene060619.t1 AT5G38480 69.291 254 76 2 6 257 2 255 1.12e-125 357
MS.gene060619.t1 AT5G38480 71.721 244 67 2 6 247 2 245 1.21e-124 355
MS.gene060619.t1 AT5G38480 71.721 244 67 2 6 247 2 245 1.21e-124 355
MS.gene060619.t1 AT1G78300 65.490 255 86 2 8 260 5 259 1.80e-120 344
MS.gene060619.t1 AT3G02520 65.769 260 84 3 1 258 1 257 4.73e-120 343
MS.gene060619.t1 AT3G02520 65.769 260 84 3 1 258 1 257 4.73e-120 343
MS.gene060619.t1 AT1G35160 63.359 262 93 2 3 261 6 267 1.22e-119 343
MS.gene060619.t1 AT4G09000 63.707 259 92 1 4 260 6 264 9.93e-119 340
MS.gene060619.t1 AT1G35160 66.946 239 77 1 3 239 6 244 1.36e-117 338
MS.gene060619.t1 AT4G09000 66.807 238 77 1 4 239 6 243 4.50e-116 335
MS.gene060619.t1 AT5G65430 65.289 242 81 1 3 241 2 243 1.56e-114 329
MS.gene060619.t1 AT5G65430 65.021 243 82 1 3 242 2 244 2.04e-114 328
MS.gene060619.t1 AT5G16050 63.462 260 92 2 3 260 2 260 5.72e-114 328
MS.gene060619.t1 AT5G16050 63.462 260 92 2 3 260 2 260 5.72e-114 328
MS.gene060619.t1 AT5G65430 65.417 240 80 1 3 239 2 241 1.56e-113 327
MS.gene060619.t1 AT5G10450 63.223 242 86 1 3 241 2 243 1.02e-112 324
MS.gene060619.t1 AT5G10450 62.963 243 87 1 3 242 2 244 1.44e-112 324
MS.gene060619.t1 AT5G10450 63.333 240 85 1 3 239 2 241 9.42e-112 322
MS.gene060619.t1 AT5G10450 63.333 240 85 1 3 239 2 241 1.24e-111 323
MS.gene060619.t1 AT1G78220 50.617 243 116 2 6 247 3 242 1.92e-82 248
MS.gene060619.t1 AT1G22290 48.837 215 86 5 6 215 3 198 5.72e-56 179
MS.gene060619.t1 AT1G22290 48.585 212 85 5 6 212 3 195 8.95e-56 178

Find 63 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAGACAACCTTACTTTA+TGG 0.114948 2.2:-17167072 MS.gene060619:CDS
CCTTGTAAGAATCTTCATTT+AGG 0.161442 2.2:+17167119 None:intergenic
AGGAGATTATTATCGGTATT+TGG 0.208721 2.2:-17169957 MS.gene060619:CDS
ATTGAATGTTAAGCGTATTA+AGG 0.286248 2.2:-17170219 MS.gene060619:CDS
AGTATCTTACCACCATCTTC+TGG 0.289512 2.2:+17167037 None:intergenic
CGGTCAAGATGAAGATGAAT+TGG 0.358772 2.2:-17166255 MS.gene060619:CDS
CTTGTAAGAATCTTCATTTA+GGG 0.359911 2.2:+17167120 None:intergenic
GGCTTGCTTTGCCAGGTGGC+AGG 0.380270 2.2:+17167171 None:intergenic
CATCAAAGGCTTGCTTTGCC+AGG 0.441295 2.2:+17167164 None:intergenic
CATAATGTCATTGCAAATGT+TGG 0.442212 2.2:+17170166 None:intergenic
GAGAGAAACTTGTTCTCTGT+TGG 0.448642 2.2:-17170326 MS.gene060619:CDS
TCTGTCACTTAAAGCATATC+AGG 0.452952 2.2:-17169894 MS.gene060619:intron
GAGCAGAAAGAAGAATCAAA+AGG 0.455348 2.2:-17170248 MS.gene060619:CDS
ACATCCTATCCGATTGGGTC+TGG 0.460221 2.2:-17167320 MS.gene060619:CDS
TGATGATGGTGTCTCAGAAC+TGG 0.464411 2.2:-17167146 MS.gene060619:CDS
AGAGAAACTTGTTCTCTGTT+GGG 0.468182 2.2:-17170325 MS.gene060619:CDS
GATTCAGCAATATTAGTAGA+TGG 0.470268 2.2:+17170119 None:intergenic
GTAGGAAAGGAGATTATTAT+CGG 0.471770 2.2:-17169964 MS.gene060619:intron
GGTGGAGGCAATGAAGAAAC+TGG 0.479492 2.2:-17170378 MS.gene060619:CDS
TATCAGAAGTCCATAAAGTA+AGG 0.486680 2.2:+17167062 None:intergenic
TGGGTTCTAGAAGAGCTTCA+TGG 0.491874 2.2:-17170289 MS.gene060619:CDS
AATGAAGAAACTGGCGAAGA+TGG 0.495701 2.2:-17170369 MS.gene060619:CDS
TCGCAACAGCTGCATGATCA+AGG 0.508740 2.2:+17167090 None:intergenic
ACCAACACATCCTATCCGAT+TGG 0.515197 2.2:-17167326 MS.gene060619:CDS
TAAGGAGTATAGGCAGAAGG+TGG 0.522406 2.2:-17170201 MS.gene060619:CDS
AGCAGAAAGAAGAATCAAAA+GGG 0.534447 2.2:-17170247 MS.gene060619:CDS
GGTCAAGATGAAGATGAATT+GGG 0.536356 2.2:-17166254 MS.gene060619:CDS
CCAACACATCCTATCCGATT+GGG 0.541379 2.2:-17167325 MS.gene060619:CDS
TTAAGCGTATTAAGGAGTAT+AGG 0.542232 2.2:-17170211 MS.gene060619:CDS
AATTTAGAGCCAGACCCAAT+CGG 0.545062 2.2:+17167311 None:intergenic
GAACAAGCTGAACGCTATGA+TGG 0.545101 2.2:-17171271 MS.gene060619:intron
GGAGTATAGGCAGAAGGTGG+AGG 0.546524 2.2:-17170198 MS.gene060619:CDS
ACTTCTGATATTCCAGAAGA+TGG 0.552034 2.2:-17167049 MS.gene060619:CDS
TATTTGGCGGAATTCAAAGC+TGG 0.559761 2.2:-17169941 MS.gene060619:CDS
TTCTGAGACACCATCATCAA+AGG 0.562143 2.2:+17167150 None:intergenic
AAAGTTCTCACGGACGTTGG+TGG 0.569457 2.2:+17171315 None:intergenic
GTATAGGCAGAAGGTGGAGG+CGG 0.569485 2.2:-17170195 MS.gene060619:CDS
CCCAATCGGATAGGATGTGT+TGG 0.570799 2.2:+17167325 None:intergenic
CCTAAATGAAGATTCTTACA+AGG 0.576397 2.2:-17167119 MS.gene060619:CDS
AATGTGGTGTGCAGAAATGG+TGG 0.577560 2.2:-17170396 MS.gene060619:intron
GACGTTGGTGGAAGAAGCCA+TGG 0.579581 2.2:+17171327 None:intergenic
CGATGAAAAGAAAGAGGTGG+CGG 0.594656 2.2:-17169918 MS.gene060619:CDS
AGATTATTATCGGTATTTGG+CGG 0.594864 2.2:-17169954 MS.gene060619:CDS
GCAAAGCAAGCCTTTGATGA+TGG 0.597901 2.2:-17167160 MS.gene060619:CDS
CAAAGGCTTGCTTTGCCAGG+TGG 0.598428 2.2:+17167167 None:intergenic
TGTTGGGTACAAGAATGTGG+TGG 0.598652 2.2:-17170309 MS.gene060619:CDS
TTGTAATTCATTCTCAGCAG+TGG 0.600849 2.2:+17167348 None:intergenic
AGCTGGCGATGAAAAGAAAG+AGG 0.603332 2.2:-17169924 MS.gene060619:CDS
CTCTGTTGGGTACAAGAATG+TGG 0.607343 2.2:-17170312 MS.gene060619:CDS
AGAGCCAGACCCAATCGGAT+AGG 0.608618 2.2:+17167316 None:intergenic
CAACATAGACAAAGTTCTCA+CGG 0.612211 2.2:+17171305 None:intergenic
TATTAAGGAGTATAGGCAGA+AGG 0.612763 2.2:-17170204 MS.gene060619:CDS
GTTGGGTACAAGAATGTGGT+GGG 0.615161 2.2:-17170308 MS.gene060619:CDS
AGATAATGAATTCACCTGAA+AGG 0.617561 2.2:-17167270 MS.gene060619:intron
GATGGATGTTGAACTAAGTG+TGG 0.633294 2.2:-17170351 MS.gene060619:CDS
ATGGAAAGCGCAACTAAGAG+CGG 0.655201 2.2:-17166275 MS.gene060619:CDS
GTGGTGTGCAGAAATGGTGG+AGG 0.663377 2.2:-17170393 MS.gene060619:intron
GACAAAGTTCTCACGGACGT+TGG 0.666574 2.2:+17171312 None:intergenic
TCTGATATTCCAGAAGATGG+TGG 0.680888 2.2:-17167046 MS.gene060619:intron
TGGCGATGAAAAGAAAGAGG+TGG 0.688230 2.2:-17169921 MS.gene060619:CDS
ATACATCTTATAATAAAACA+CGG 0.718122 2.2:+17170094 None:intergenic
CATCTTATAATAAAACACGG+TGG 0.748656 2.2:+17170097 None:intergenic
GTTCTAGAAGAGCTTCATGG+AGG 0.750544 2.2:-17170286 MS.gene060619:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAAAAAAAATGTTA+TGG + chr2.2:17168436-17168455 None:intergenic 10.0%
!! AAACAAAATCAATAAAAATA+TGG + chr2.2:17170992-17171011 None:intergenic 10.0%
!!! TAATTTTTAAGGTAAAATAT+TGG + chr2.2:17169539-17169558 None:intergenic 10.0%
!! AAAAAAAAATGTTATGGTAT+TGG + chr2.2:17168430-17168449 None:intergenic 15.0%
!! AAAAATGTATAAGTAAAACT+TGG - chr2.2:17168585-17168604 MS.gene060619:intron 15.0%
!! AACTTGACAAAAAAAAAAAA+TGG + chr2.2:17170846-17170865 None:intergenic 15.0%
!! AGTTATTTATATATGTTCTT+TGG - chr2.2:17171229-17171248 MS.gene060619:intron 15.0%
!! ATAATTTAAGAAAGTAAATG+TGG - chr2.2:17167033-17167052 MS.gene060619:intron 15.0%
!! ATACATCTTATAATAAAACA+CGG + chr2.2:17167481-17167500 None:intergenic 15.0%
!! TTACTTTCTTAAATTATTAC+CGG + chr2.2:17167030-17167049 None:intergenic 15.0%
!! TTGAAATATATTGAAGAATA+AGG + chr2.2:17170115-17170134 None:intergenic 15.0%
!!! AAACTTAATTTGAAACAATT+TGG + chr2.2:17168405-17168424 None:intergenic 15.0%
!!! ATAATAATATTGTCATTTCA+TGG + chr2.2:17168681-17168700 None:intergenic 15.0%
!!! TTATTTGTTGTATACAATTA+AGG - chr2.2:17168978-17168997 MS.gene060619:intron 15.0%
!!! TTTTTTTGTTATACATTAGT+GGG - chr2.2:17168263-17168282 MS.gene060619:intron 15.0%
!!! TTTTTTTTTTTGTTTAGATC+TGG - chr2.2:17168441-17168460 MS.gene060619:intron 15.0%
!! AAGTAAAGTAATGTGATTTA+TGG - chr2.2:17166553-17166572 MS.gene060619:intron 20.0%
!! AAGTAATTTGAGTATTTGTT+TGG - chr2.2:17167583-17167602 MS.gene060619:intron 20.0%
!! ACTTATTTAAATTCATCTAC+TGG + chr2.2:17167928-17167947 None:intergenic 20.0%
!! ATAATCAAATGAAACATGAA+CGG + chr2.2:17168962-17168981 None:intergenic 20.0%
!! ATATAAATAACTCAAACCAT+AGG + chr2.2:17171221-17171240 None:intergenic 20.0%
!! ATATTTCAACTTAGTATTAG+TGG - chr2.2:17170126-17170145 MS.gene060619:CDS 20.0%
!! ATTTGTATCATAAGATTAGA+TGG - chr2.2:17168111-17168130 MS.gene060619:intron 20.0%
!! CACTAATGTATAACAAAAAA+AGG + chr2.2:17168264-17168283 None:intergenic 20.0%
!! GAACTATAATGATGATAAAA+TGG + chr2.2:17169314-17169333 None:intergenic 20.0%
!! TAACTTATGAAAATAGTGTA+TGG + chr2.2:17167831-17167850 None:intergenic 20.0%
!! TGACAAAAAAAAAAAATGGT+TGG + chr2.2:17170842-17170861 None:intergenic 20.0%
!! TGATAGAGAGATAATTTATA+GGG - chr2.2:17169217-17169236 MS.gene060619:intron 20.0%
!! TGCTAAAAGATAAACTATTT+AGG - chr2.2:17168854-17168873 MS.gene060619:intron 20.0%
!! TTTGTATCATAAGATTAGAT+GGG - chr2.2:17168112-17168131 MS.gene060619:intron 20.0%
!!! AAAATTCTAGAGAACTAAAT+TGG + chr2.2:17166764-17166783 None:intergenic 20.0%
!!! AAATTCTAGAGAACTAAATT+GGG + chr2.2:17166763-17166782 None:intergenic 20.0%
!!! AATCTATGTTTTTCACTTAA+AGG - chr2.2:17168522-17168541 MS.gene060619:intron 20.0%
!!! AATTTGAATGATTTAGAATG+TGG - chr2.2:17167160-17167179 MS.gene060619:CDS 20.0%
!!! ACTATTTTCATAAGTTATCT+TGG - chr2.2:17167834-17167853 MS.gene060619:intron 20.0%
!!! ATAGAATTTATCATTTTGGT+AGG - chr2.2:17169964-17169983 MS.gene060619:intron 20.0%
!!! ATTTGAAACAATTTGGTAAA+AGG + chr2.2:17168398-17168417 None:intergenic 20.0%
!!! ATTTTTTGTCGAAACTAAAT+TGG - chr2.2:17166919-17166938 MS.gene060619:intron 20.0%
!!! CTTGATAGAATTTATCATTT+TGG - chr2.2:17169960-17169979 MS.gene060619:CDS 20.0%
!!! CTTTTTTTGTTATACATTAG+TGG - chr2.2:17168262-17168281 MS.gene060619:intron 20.0%
!!! GAATCTTAATTTTATAACCA+TGG - chr2.2:17171080-17171099 MS.gene060619:intron 20.0%
!!! TAAAATATTGGCTAAAAGAT+TGG + chr2.2:17169527-17169546 None:intergenic 20.0%
!!! TATGAAAAGATAGTTGATAT+AGG - chr2.2:17169060-17169079 MS.gene060619:intron 20.0%
!!! TCAACTATCTTTTCATATTA+TGG + chr2.2:17169057-17169076 None:intergenic 20.0%
!!! TTTGTTTTTGTGTTAGATTT+TGG - chr2.2:17167553-17167572 MS.gene060619:intron 20.0%
!!! TTTTTTGTCGAAACTAAATT+GGG - chr2.2:17166920-17166939 MS.gene060619:intron 20.0%
! AATAAGAAGCAACTTAATGT+TGG + chr2.2:17170611-17170630 None:intergenic 25.0%
! AATGAGTAAGAAAGAGAAAA+TGG + chr2.2:17166432-17166451 None:intergenic 25.0%
! AATTACGCAAAATTACGATT+TGG + chr2.2:17170370-17170389 None:intergenic 25.0%
! AGAAAACTTGAAAAATTTCC+AGG - chr2.2:17170149-17170168 MS.gene060619:CDS 25.0%
! ATAAGAAGCAACTTAATGTT+GGG + chr2.2:17170610-17170629 None:intergenic 25.0%
! ATCCAAAATTGATACACAAT+AGG + chr2.2:17170718-17170737 None:intergenic 25.0%
! ATGAGTAAGAAAGAGAAAAT+GGG + chr2.2:17166431-17166450 None:intergenic 25.0%
! ATTAGAGGAATTAATTTCTG+AGG - chr2.2:17166880-17166899 MS.gene060619:intron 25.0%
! ATTGAATGTTAAGCGTATTA+AGG - chr2.2:17167353-17167372 MS.gene060619:CDS 25.0%
! CAAGATTCATCATAATGAAT+AGG + chr2.2:17170760-17170779 None:intergenic 25.0%
! CTTGTAAGAATCTTCATTTA+GGG + chr2.2:17170455-17170474 None:intergenic 25.0%
! GTAATTATATGTATCAGTGT+CGG + chr2.2:17166626-17166645 None:intergenic 25.0%
! GTACTAGAGAGTTTATTAAA+GGG + chr2.2:17168240-17168259 None:intergenic 25.0%
! GTGATAGAGAGATAATTTAT+AGG - chr2.2:17169216-17169235 MS.gene060619:intron 25.0%
! TAGAAAAAATGCATCTGATA+GGG - chr2.2:17169179-17169198 MS.gene060619:intron 25.0%
! TCAAAACTTGACCAATATAA+TGG + chr2.2:17169495-17169514 None:intergenic 25.0%
! TCCAAAATTGATACACAATA+GGG + chr2.2:17170717-17170736 None:intergenic 25.0%
! TCCTAAAAGTTCCATTATAT+TGG - chr2.2:17169481-17169500 MS.gene060619:intron 25.0%
! TGTACTAGAGAGTTTATTAA+AGG + chr2.2:17168241-17168260 None:intergenic 25.0%
! TTAATGCATAACTAAGTTAC+TGG + chr2.2:17168704-17168723 None:intergenic 25.0%
! TTAGAGGAATTAATTTCTGA+GGG - chr2.2:17166881-17166900 MS.gene060619:intron 25.0%
! TTATAGAATTTGACAACTCT+GGG - chr2.2:17168926-17168945 MS.gene060619:intron 25.0%
!! AACATTAAGTTGCTTCTTAT+TGG - chr2.2:17170610-17170629 MS.gene060619:intron 25.0%
!! ATGTAAATTTGTTTACTGGT+GGG - chr2.2:17169418-17169437 MS.gene060619:intron 25.0%
!! TACGAATAACTTTTATGTCA+TGG - chr2.2:17168176-17168195 MS.gene060619:intron 25.0%
!! TCTTAATTTTATAACCATGG+TGG - chr2.2:17171083-17171102 MS.gene060619:intron 25.0%
!! TTAGGCATAAGAAAGTATAA+GGG + chr2.2:17167964-17167983 None:intergenic 25.0%
!! TTGTGTATCAATTTTGGATA+TGG - chr2.2:17170719-17170738 MS.gene060619:intron 25.0%
!!! ACAAAAGCATTTAATTAAGC+TGG + chr2.2:17167778-17167797 None:intergenic 25.0%
!!! ACCAATATAATGGAACTTTT+AGG + chr2.2:17169485-17169504 None:intergenic 25.0%
!!! ATTTTGCGTAATTTGTTTTC+AGG - chr2.2:17170377-17170396 MS.gene060619:CDS 25.0%
!!! TTTTGCGTAATTTGTTTTCA+GGG - chr2.2:17170378-17170397 MS.gene060619:CDS 25.0%
AAAAGTTATTCGTACATAGC+AGG + chr2.2:17168170-17168189 None:intergenic 30.0%
AAAGAAAAAACATGAAAGCG+AGG + chr2.2:17169743-17169762 None:intergenic 30.0%
AACATAAGTCTTCTGATTCA+CGG - chr2.2:17171054-17171073 MS.gene060619:intron 30.0%
AATACAATAAGCCGAGAAAT+TGG + chr2.2:17169273-17169292 None:intergenic 30.0%
AATTGAATTGTGATGTCGTA+TGG + chr2.2:17168556-17168575 None:intergenic 30.0%
ACAAGGATAGATGAACTTTA+TGG - chr2.2:17167993-17168012 MS.gene060619:intron 30.0%
ACCAGATTGAAATCTTACTT+AGG + chr2.2:17170036-17170055 None:intergenic 30.0%
ACTCAATCTTAGCTTCTTAT+TGG - chr2.2:17171172-17171191 MS.gene060619:intron 30.0%
AGATAATGAATTCACCTGAA+AGG - chr2.2:17170302-17170321 MS.gene060619:CDS 30.0%
AGATTATTATCGGTATTTGG+CGG - chr2.2:17167618-17167637 MS.gene060619:intron 30.0%
AGCAGAAAGAAGAATCAAAA+GGG - chr2.2:17167325-17167344 MS.gene060619:CDS 30.0%
AGGAGATTATTATCGGTATT+TGG - chr2.2:17167615-17167634 MS.gene060619:intron 30.0%
AGTGACAAGAGAAAAATGAT+TGG + chr2.2:17170876-17170895 None:intergenic 30.0%
ATGGTGGTAAGATACTTAAA+CGG - chr2.2:17170542-17170561 MS.gene060619:intron 30.0%
CAATCACTTCAGAAAAAGTA+CGG - chr2.2:17166981-17167000 MS.gene060619:intron 30.0%
CAGATTGAAATCTTACTTAG+GGG + chr2.2:17170034-17170053 None:intergenic 30.0%
CATAATAACTATTACCACCA+TGG + chr2.2:17171100-17171119 None:intergenic 30.0%
CATAATGTCATTGCAAATGT+TGG + chr2.2:17167409-17167428 None:intergenic 30.0%
CATCTTATAATAAAACACGG+TGG + chr2.2:17167478-17167497 None:intergenic 30.0%
CCAGATTGAAATCTTACTTA+GGG + chr2.2:17170035-17170054 None:intergenic 30.0%
CCTAAATGAAGATTCTTACA+AGG - chr2.2:17170453-17170472 MS.gene060619:intron 30.0%
CCTTGTAAGAATCTTCATTT+AGG + chr2.2:17170456-17170475 None:intergenic 30.0%
CTAGAAAAAATGCATCTGAT+AGG - chr2.2:17169178-17169197 MS.gene060619:intron 30.0%
GATTCAGCAATATTAGTAGA+TGG + chr2.2:17167456-17167475 None:intergenic 30.0%
GTAGGAAAGGAGATTATTAT+CGG - chr2.2:17167608-17167627 MS.gene060619:intron 30.0%
GTTATAGAATTTGACAACTC+TGG - chr2.2:17168925-17168944 MS.gene060619:intron 30.0%
TATCAGAAGTCCATAAAGTA+AGG + chr2.2:17170513-17170532 None:intergenic 30.0%
TATGTGCATATGACAATTGT+GGG - chr2.2:17171116-17171135 MS.gene060619:intron 30.0%
TATTTGTTTGGATGTAGGAA+AGG - chr2.2:17167595-17167614 MS.gene060619:intron 30.0%
TGATTCTCTGTGTCATATTA+TGG - chr2.2:17168731-17168750 MS.gene060619:intron 30.0%
TGTTTGGGTCATTATATTAG+AGG - chr2.2:17166865-17166884 MS.gene060619:intron 30.0%
TTAGATTAGCACCAAAACTA+TGG + chr2.2:17168351-17168370 None:intergenic 30.0%
TTATGTGCATATGACAATTG+TGG - chr2.2:17171115-17171134 MS.gene060619:intron 30.0%
TTGAGTATTTGTTTGGATGT+AGG - chr2.2:17167590-17167609 MS.gene060619:intron 30.0%
TTGGTATTGCATGAATACTT+TGG - chr2.2:17168604-17168623 MS.gene060619:intron 30.0%
! ACTTTTATGTCATGGCTTAT+TGG - chr2.2:17168184-17168203 MS.gene060619:intron 30.0%
! AGAAAGTATAAGGGTCTATT+TGG + chr2.2:17167955-17167974 None:intergenic 30.0%
! ATATCTAAACTAGTCTCTTC+CGG - chr2.2:17166818-17166837 MS.gene060619:intron 30.0%
! ATCTCAAACTTTTGTTCCTA+TGG - chr2.2:17171202-17171221 MS.gene060619:intron 30.0%
! CATGTAAATTTGTTTACTGG+TGG - chr2.2:17169417-17169436 MS.gene060619:intron 30.0%
! CTTTTATGTCATGGCTTATT+GGG - chr2.2:17168185-17168204 MS.gene060619:intron 30.0%
! GGCAAGAAGCATAAATATAA+AGG + chr2.2:17168299-17168318 None:intergenic 30.0%
! GGGTCTAAGAATTTTATCTT+AGG - chr2.2:17168205-17168224 MS.gene060619:intron 30.0%
! GTGAGACTGAGTAATTTTTA+AGG + chr2.2:17169550-17169569 None:intergenic 30.0%
! GTTAGGCATAAGAAAGTATA+AGG + chr2.2:17167965-17167984 None:intergenic 30.0%
! TCCCTATTGTGTATCAATTT+TGG - chr2.2:17170713-17170732 MS.gene060619:intron 30.0%
! TCGCATGTAAATTTGTTTAC+TGG - chr2.2:17169414-17169433 MS.gene060619:intron 30.0%
! TGGATTTATGTCCATAGTTT+TGG - chr2.2:17168337-17168356 MS.gene060619:intron 30.0%
! TTAAGCGTATTAAGGAGTAT+AGG - chr2.2:17167361-17167380 MS.gene060619:CDS 30.0%
!! ATTTGATCTTGTTGTTTGTG+AGG - chr2.2:17167513-17167532 MS.gene060619:intron 30.0%
!! GAAAAAGTGTTGTCAAATAG+CGG - chr2.2:17168876-17168895 MS.gene060619:intron 30.0%
!!! AGTTCTCTAGAATTTTCTTG+CGG - chr2.2:17166768-17166787 MS.gene060619:intron 30.0%
!!! GAAGTTTTGAACAGTGTTTA+TGG - chr2.2:17166348-17166367 MS.gene060619:intron 30.0%
AAAATGGTCACTAGTGCAAA+AGG + chr2.2:17169298-17169317 None:intergenic 35.0%
AATTATTACCGGTGTTTACG+CGG + chr2.2:17167019-17167038 None:intergenic 35.0%
ACTTCTGATATTCCAGAAGA+TGG - chr2.2:17170523-17170542 MS.gene060619:intron 35.0%
ATGAATTCACCTGAAAGGTA+CGG - chr2.2:17170307-17170326 MS.gene060619:CDS 35.0%
ATTTATGCTTCTTGCCTTGT+TGG - chr2.2:17168303-17168322 MS.gene060619:intron 35.0%
CAACAGTTGAAATCTTTGTC+TGG + chr2.2:17170176-17170195 None:intergenic 35.0%
CAACATAGACAAAGTTCTCA+CGG + chr2.2:17166270-17166289 None:intergenic 35.0%
CATTTCAGAGGACCAAAAAA+TGG - chr2.2:17171278-17171297 MS.gene060619:CDS 35.0%
CCAATTTGGTACCAATTTCT+CGG - chr2.2:17169259-17169278 MS.gene060619:intron 35.0%
CCCTAAGTAAGATTTCAATC+TGG - chr2.2:17170032-17170051 MS.gene060619:intron 35.0%
CGAGAAATTGGTACCAAATT+GGG + chr2.2:17169261-17169280 None:intergenic 35.0%
GAAGATGTTTGTTCCTAAGA+GGG + chr2.2:17168632-17168651 None:intergenic 35.0%
GAGCAGAAAGAAGAATCAAA+AGG - chr2.2:17167324-17167343 MS.gene060619:CDS 35.0%
GGATCTTAATGGGGATAATA+AGG + chr2.2:17168149-17168168 None:intergenic 35.0%
GGTCAAGATGAAGATGAATT+GGG - chr2.2:17171318-17171337 MS.gene060619:CDS 35.0%
GTACATAGCAGGATCTTAAT+GGG + chr2.2:17168159-17168178 None:intergenic 35.0%
GTCACAAATCTTTCCCAATT+TGG - chr2.2:17169245-17169264 MS.gene060619:intron 35.0%
TAATGACTGAATCTCTTCAC+AGG - chr2.2:17168051-17168070 MS.gene060619:intron 35.0%
TACATAGCAGGATCTTAATG+GGG + chr2.2:17168158-17168177 None:intergenic 35.0%
TATGACACAGAGAATCATGA+TGG + chr2.2:17168728-17168747 None:intergenic 35.0%
TCACAGGCTTGTAATATATC+AGG - chr2.2:17168067-17168086 MS.gene060619:intron 35.0%
TCGAATGTAATCACTTGTGT+TGG - chr2.2:17167056-17167075 MS.gene060619:CDS 35.0%
TGAAGATGTTTGTTCCTAAG+AGG + chr2.2:17168633-17168652 None:intergenic 35.0%
TTAACCTGTTGTAGACGATT+TGG - chr2.2:17168759-17168778 MS.gene060619:intron 35.0%
TTCTCTGTGTCATATTATGG+AGG - chr2.2:17168734-17168753 MS.gene060619:intron 35.0%
TTGTAATTCATTCTCAGCAG+TGG + chr2.2:17170227-17170246 None:intergenic 35.0%
! AACACTGAGCTCAATTTTCT+TGG + chr2.2:17169125-17169144 None:intergenic 35.0%
! AGAGAAACTTGTTCTCTGTT+GGG - chr2.2:17167247-17167266 MS.gene060619:intron 35.0%
! AGTCTCTCACAATTTTCTAG+CGG + chr2.2:17166946-17166965 None:intergenic 35.0%
! CTTCCAATTTTCCATTTCAG+AGG - chr2.2:17171266-17171285 MS.gene060619:intron 35.0%
! TATTAAGGAGTATAGGCAGA+AGG - chr2.2:17167368-17167387 MS.gene060619:intron 35.0%
! TCTGTCACTTAAAGCATATC+AGG - chr2.2:17167678-17167697 MS.gene060619:intron 35.0%
! TTTAAAACCTATGCCAACCA+AGG + chr2.2:17170064-17170083 None:intergenic 35.0%
!! AATAGGGATTCGTATCGATT+AGG + chr2.2:17170701-17170720 None:intergenic 35.0%
!! CTTCTTATTGGTGCTAATCA+AGG - chr2.2:17170622-17170641 MS.gene060619:intron 35.0%
!!! CATTTTTTGGTCCTCTGAAA+TGG + chr2.2:17171280-17171299 None:intergenic 35.0%
!!! TAGTTGCGCTTTCCATTTTT+TGG + chr2.2:17171293-17171312 None:intergenic 35.0%
AAATGAAACATGAACGGCCA+AGG + chr2.2:17168956-17168975 None:intergenic 40.0%
AATGAAGAAACTGGCGAAGA+TGG - chr2.2:17167203-17167222 MS.gene060619:intron 40.0%
ACATACCCACACTCTTGTAA+TGG + chr2.2:17166531-17166550 None:intergenic 40.0%
ACCGGGGACAAATTATGTTT+GGG - chr2.2:17166850-17166869 MS.gene060619:intron 40.0%
AGAAGCTAAGATTGAGTGCT+TGG + chr2.2:17171169-17171188 None:intergenic 40.0%
AGTATCTTACCACCATCTTC+TGG + chr2.2:17170538-17170557 None:intergenic 40.0%
AGTTTGCCTTAGGTCATGTT+TGG - chr2.2:17167748-17167767 MS.gene060619:intron 40.0%
ATTGACCCATTACAAGAGTG+TGG - chr2.2:17166522-17166541 MS.gene060619:intron 40.0%
CATACCCACACTCTTGTAAT+GGG + chr2.2:17166530-17166549 None:intergenic 40.0%
CCAAAACAGTCTCACAACAA+GGG - chr2.2:17167897-17167916 MS.gene060619:intron 40.0%
CCAAATGAAGTTCTCCAACA+AGG + chr2.2:17168320-17168339 None:intergenic 40.0%
CCGAGAAATTGGTACCAAAT+TGG + chr2.2:17169262-17169281 None:intergenic 40.0%
CCTTGTTGGAGAACTTCATT+TGG - chr2.2:17168317-17168336 MS.gene060619:intron 40.0%
CGGTCAAGATGAAGATGAAT+TGG - chr2.2:17171317-17171336 MS.gene060619:CDS 40.0%
CGTACATAGCAGGATCTTAA+TGG + chr2.2:17168160-17168179 None:intergenic 40.0%
GAATTGTGATGTCGTATGGA+AGG + chr2.2:17168552-17168571 None:intergenic 40.0%
GATGGATGTTGAACTAAGTG+TGG - chr2.2:17167221-17167240 MS.gene060619:intron 40.0%
GCACAAGTACAGATGAACTT+GGG + chr2.2:17169766-17169785 None:intergenic 40.0%
GGTTATCCAAACATGACCTA+AGG + chr2.2:17167757-17167776 None:intergenic 40.0%
GTGTCTGTTGAAAACCAGTT+GGG + chr2.2:17169682-17169701 None:intergenic 40.0%
GTTTGTGTTAATGAGAACCG+AGG - chr2.2:17170338-17170357 MS.gene060619:CDS 40.0%
TACCGGGGACAAATTATGTT+TGG - chr2.2:17166849-17166868 MS.gene060619:intron 40.0%
TAGAATGTGGTGTGCAGAAA+TGG - chr2.2:17167173-17167192 MS.gene060619:CDS 40.0%
TATTTGGCGGAATTCAAAGC+TGG - chr2.2:17167631-17167650 MS.gene060619:intron 40.0%
TCAGTGCTAATTGTGAGTCA+TGG - chr2.2:17169851-17169870 MS.gene060619:intron 40.0%
TCCAAAACAGTCTCACAACA+AGG - chr2.2:17167896-17167915 MS.gene060619:intron 40.0%
TCGTAACATGAGTTTGCCTT+AGG - chr2.2:17167738-17167757 MS.gene060619:intron 40.0%
TCTGATATTCCAGAAGATGG+TGG - chr2.2:17170526-17170545 MS.gene060619:intron 40.0%
TCTGTACTTGTGCATTCTCA+TGG - chr2.2:17169773-17169792 MS.gene060619:intron 40.0%
TGCACAAGTACAGATGAACT+TGG + chr2.2:17169767-17169786 None:intergenic 40.0%
TGCGAGACAACCTTACTTTA+TGG - chr2.2:17170500-17170519 MS.gene060619:intron 40.0%
TGTCGAACACCTTCAATTCA+GGG - chr2.2:17167096-17167115 MS.gene060619:CDS 40.0%
TGTCTGTTGAAAACCAGTTG+GGG + chr2.2:17169681-17169700 None:intergenic 40.0%
TTGAAATCTTTGTCTGGACC+TGG + chr2.2:17170170-17170189 None:intergenic 40.0%
TTTATGACCTTACAGCCACT+GGG - chr2.2:17169382-17169401 MS.gene060619:intron 40.0%
! AATTTAGAGCCAGACCCAAT+CGG + chr2.2:17170264-17170283 None:intergenic 40.0%
! ACCCAAACATAATTTGTCCC+CGG + chr2.2:17166854-17166873 None:intergenic 40.0%
! CTCTTCCGGTATTTTCATAC+CGG - chr2.2:17166832-17166851 MS.gene060619:intron 40.0%
! GAGAGAAACTTGTTCTCTGT+TGG - chr2.2:17167246-17167265 MS.gene060619:intron 40.0%
! TCTTCCGGTATTTTCATACC+GGG - chr2.2:17166833-17166852 MS.gene060619:intron 40.0%
! TGAATTCACCTGAAAGGTAC+GGG - chr2.2:17170308-17170327 MS.gene060619:CDS 40.0%
! TTGACCCATTACAAGAGTGT+GGG - chr2.2:17166523-17166542 MS.gene060619:intron 40.0%
! TTTTATGACCTTACAGCCAC+TGG - chr2.2:17169381-17169400 MS.gene060619:intron 40.0%
!! GCTGAAGTTCTGAAAACAGA+GGG - chr2.2:17169151-17169170 MS.gene060619:intron 40.0%
!! GGTCCTCTGAAATGGAAAAT+TGG + chr2.2:17171272-17171291 None:intergenic 40.0%
!! TGCTGAAGTTCTGAAAACAG+AGG - chr2.2:17169150-17169169 MS.gene060619:intron 40.0%
!! TTCTGAGACACCATCATCAA+AGG + chr2.2:17170425-17170444 None:intergenic 40.0%
AAAACCTATGCCAACCAAGG+TGG + chr2.2:17170061-17170080 None:intergenic 45.0%
AATGTGGTGTGCAGAAATGG+TGG - chr2.2:17167176-17167195 MS.gene060619:CDS 45.0%
ACACCAAAGCCCTGAATTGA+AGG + chr2.2:17167108-17167127 None:intergenic 45.0%
ACACCTTCAATTCAGGGCTT+TGG - chr2.2:17167102-17167121 MS.gene060619:CDS 45.0%
ACCAACACATCCTATCCGAT+TGG - chr2.2:17170246-17170265 MS.gene060619:CDS 45.0%
ACCACAAATACCTCCTTGCA+TGG + chr2.2:17169102-17169121 None:intergenic 45.0%
AGATTAAGCACCATGCAAGG+AGG - chr2.2:17169089-17169108 MS.gene060619:intron 45.0%
AGCAGATTAAGCACCATGCA+AGG - chr2.2:17169086-17169105 MS.gene060619:intron 45.0%
AGCTGGCGATGAAAAGAAAG+AGG - chr2.2:17167648-17167667 MS.gene060619:intron 45.0%
ATCTGATAGGGAGCAGTTGT+GGG - chr2.2:17169191-17169210 MS.gene060619:intron 45.0%
CAATCCTACGATCTAACTCG+CGG + chr2.2:17169356-17169375 None:intergenic 45.0%
CATTCTCATGGCATCTAGTG+GGG - chr2.2:17169785-17169804 MS.gene060619:intron 45.0%
CCAACACATCCTATCCGATT+GGG - chr2.2:17170247-17170266 MS.gene060619:CDS 45.0%
CGATGAAAAGAAAGAGGTGG+CGG - chr2.2:17167654-17167673 MS.gene060619:intron 45.0%
CTCTGTTGGGTACAAGAATG+TGG - chr2.2:17167260-17167279 MS.gene060619:intron 45.0%
CTGATATGTGCATGTGTGTG+TGG + chr2.2:17170571-17170590 None:intergenic 45.0%
GAACAAGCTGAACGCTATGA+TGG - chr2.2:17166301-17166320 MS.gene060619:intron 45.0%
GCAAAGCAAGCCTTTGATGA+TGG - chr2.2:17170412-17170431 MS.gene060619:intron 45.0%
GCATTCTCATGGCATCTAGT+GGG - chr2.2:17169784-17169803 MS.gene060619:intron 45.0%
GCTTGCAAGATTGCTGAGAT+CGG - chr2.2:17169444-17169463 MS.gene060619:intron 45.0%
GGTGTCTGTTGAAAACCAGT+TGG + chr2.2:17169683-17169702 None:intergenic 45.0%
GTGTCGAACACCTTCAATTC+AGG - chr2.2:17167095-17167114 MS.gene060619:CDS 45.0%
GTTGGGTACAAGAATGTGGT+GGG - chr2.2:17167264-17167283 MS.gene060619:intron 45.0%
TCATCTATCCTTGTCAGCAG+CGG + chr2.2:17167987-17168006 None:intergenic 45.0%
TGACTGCAATGAAGCAGTAG+AGG + chr2.2:17169704-17169723 None:intergenic 45.0%
TGCATTCTCATGGCATCTAG+TGG - chr2.2:17169783-17169802 MS.gene060619:intron 45.0%
TGGCGATGAAAAGAAAGAGG+TGG - chr2.2:17167651-17167670 MS.gene060619:intron 45.0%
TGTCCCCGGTATGAAAATAC+CGG + chr2.2:17166840-17166859 None:intergenic 45.0%
TGTTGAAAACCAGTTGGGGA+GGG + chr2.2:17169677-17169696 None:intergenic 45.0%
TGTTGGGTACAAGAATGTGG+TGG - chr2.2:17167263-17167282 MS.gene060619:intron 45.0%
TTTCAATCTGGTGACCACCT+TGG - chr2.2:17170044-17170063 MS.gene060619:intron 45.0%
! ATGGAAAGCGCAACTAAGAG+CGG - chr2.2:17171297-17171316 MS.gene060619:CDS 45.0%
! CTTCCGGTATTTTCATACCG+GGG - chr2.2:17166834-17166853 MS.gene060619:intron 45.0%
! GTAGAGTGTCTGTGCTTCAT+AGG + chr2.2:17166597-17166616 None:intergenic 45.0%
! TAAGGAGTATAGGCAGAAGG+TGG - chr2.2:17167371-17167390 MS.gene060619:intron 45.0%
!! AAGTTCTGAAAACAGAGGGC+AGG - chr2.2:17169155-17169174 MS.gene060619:intron 45.0%
!! ACCATGCAAGGAGGTATTTG+TGG - chr2.2:17169098-17169117 MS.gene060619:intron 45.0%
!! ACTTGTGTTGGTGTCAGACA+TGG - chr2.2:17167068-17167087 MS.gene060619:CDS 45.0%
!! CCCTTGTTGTGAGACTGTTT+TGG + chr2.2:17167900-17167919 None:intergenic 45.0%
!! GAATACTTTGGTGCCCTCTT+AGG - chr2.2:17168616-17168635 MS.gene060619:intron 45.0%
!! GTTCTAGAAGAGCTTCATGG+AGG - chr2.2:17167286-17167305 MS.gene060619:CDS 45.0%
!! TCAGGGCTTTGGTGTTTCAT+AGG - chr2.2:17167113-17167132 MS.gene060619:CDS 45.0%
!! TGATGATGGTGTCTCAGAAC+TGG - chr2.2:17170426-17170445 MS.gene060619:intron 45.0%
!! TGGGTTCTAGAAGAGCTTCA+TGG - chr2.2:17167283-17167302 MS.gene060619:CDS 45.0%
!!! AATTTATTAAAATAGATTTT+GGG + chr2.2:17170799-17170818 None:intergenic 5.0%
!!! TAATTTATTAAAATAGATTT+TGG + chr2.2:17170800-17170819 None:intergenic 5.0%
AAAGTTCTCACGGACGTTGG+TGG + chr2.2:17166260-17166279 None:intergenic 50.0%
AAGACCGCGAGTTAGATCGT+AGG - chr2.2:17169349-17169368 MS.gene060619:intron 50.0%
AATCTGGTGACCACCTTGGT+TGG - chr2.2:17170048-17170067 MS.gene060619:intron 50.0%
ACATCCTATCCGATTGGGTC+TGG - chr2.2:17170252-17170271 MS.gene060619:CDS 50.0%
ACGGATACGGACACAAACAC+CGG + chr2.2:17166704-17166723 None:intergenic 50.0%
ATAACGCCACAGCACTGTAC+CGG + chr2.2:17168910-17168929 None:intergenic 50.0%
CACACACAGCCTATGAAGCA+CGG + chr2.2:17166723-17166742 None:intergenic 50.0%
CAGCCTATGAAGCACGGATA+CGG + chr2.2:17166717-17166736 None:intergenic 50.0%
CATCTGATAGGGAGCAGTTG+TGG - chr2.2:17169190-17169209 MS.gene060619:intron 50.0%
CATGAAAGCGAGGAGCTTGT+TGG + chr2.2:17169733-17169752 None:intergenic 50.0%
CCCAATCGGATAGGATGTGT+TGG + chr2.2:17170250-17170269 None:intergenic 50.0%
CGCGAGTTAGATCGTAGGAT+TGG - chr2.2:17169354-17169373 MS.gene060619:intron 50.0%
CTGTTGAAAACCAGTTGGGG+AGG + chr2.2:17169678-17169697 None:intergenic 50.0%
GACAAAGTTCTCACGGACGT+TGG + chr2.2:17166263-17166282 None:intergenic 50.0%
GGTGGAGGCAATGAAGAAAC+TGG - chr2.2:17167194-17167213 MS.gene060619:intron 50.0%
GTGGCCAAATCGTCTACAAC+AGG + chr2.2:17168766-17168785 None:intergenic 50.0%
GTTCAAAGTCAGCTGTGCTC+TGG + chr2.2:17168824-17168843 None:intergenic 50.0%
TATCCTTGTCAGCAGCGGTT+AGG + chr2.2:17167982-17168001 None:intergenic 50.0%
TCAAATAGCGGCTAATGCGC+CGG - chr2.2:17168888-17168907 MS.gene060619:intron 50.0%
TCAGGGGGTTAGGTGTCAAT+GGG - chr2.2:17169828-17169847 MS.gene060619:intron 50.0%
TCGCAACAGCTGCATGATCA+AGG + chr2.2:17170485-17170504 None:intergenic 50.0%
TGACAACTCTGGGTTTGCCT+TGG - chr2.2:17168936-17168955 MS.gene060619:intron 50.0%
TGTCCGTATCCGTGCTTCAT+AGG - chr2.2:17166711-17166730 MS.gene060619:intron 50.0%
! CATCAAAGGCTTGCTTTGCC+AGG + chr2.2:17170411-17170430 None:intergenic 50.0%
! CATTTTCGCCCGTACCTTTC+AGG + chr2.2:17170319-17170338 None:intergenic 50.0%
! TTACGATTTGGCAGCAGCCT+CGG + chr2.2:17170358-17170377 None:intergenic 50.0%
ACGGACACAAACACCGGACA+CGG + chr2.2:17166698-17166717 None:intergenic 55.0%
AGAGCCAGACCCAATCGGAT+AGG + chr2.2:17170259-17170278 None:intergenic 55.0%
ATGCCTAACCGCTGCTGACA+AGG - chr2.2:17167976-17167995 MS.gene060619:intron 55.0%
ATGCGAGTTAGATCGCCCAG+TGG + chr2.2:17169400-17169419 None:intergenic 55.0%
CAGCTGCGGTTTGACAACAG+TGG + chr2.2:17168785-17168804 None:intergenic 55.0%
CATCACTGCCGCGTAAACAC+CGG - chr2.2:17167008-17167027 MS.gene060619:intron 55.0%
CATGGCATCTAGTGGGGTTG+CGG - chr2.2:17169791-17169810 MS.gene060619:intron 55.0%
GAAAACCAGTTGGGGAGGGA+GGG + chr2.2:17169673-17169692 None:intergenic 55.0%
GGAGTATAGGCAGAAGGTGG+AGG - chr2.2:17167374-17167393 MS.gene060619:intron 55.0%
GTATAGGCAGAAGGTGGAGG+CGG - chr2.2:17167377-17167396 MS.gene060619:intron 55.0%
GTCAGGGGGTTAGGTGTCAA+TGG - chr2.2:17169827-17169846 MS.gene060619:intron 55.0%
GTGACCACCTTGGTTGGCAT+AGG - chr2.2:17170054-17170073 MS.gene060619:intron 55.0%
GTGGTGTGCAGAAATGGTGG+AGG - chr2.2:17167179-17167198 MS.gene060619:intron 55.0%
TAGATCGCCCAGTGGCTGTA+AGG + chr2.2:17169392-17169411 None:intergenic 55.0%
TGAAAACCAGTTGGGGAGGG+AGG + chr2.2:17169674-17169693 None:intergenic 55.0%
TGATAGGGAGCAGTTGTGGG+TGG - chr2.2:17169194-17169213 MS.gene060619:intron 55.0%
TTGTCAAACCGCAGCTGCAG+CGG - chr2.2:17168788-17168807 MS.gene060619:intron 55.0%
! CAAAGGCTTGCTTTGCCAGG+TGG + chr2.2:17170408-17170427 None:intergenic 55.0%
CTATAGCACCGCTGCAGCTG+CGG + chr2.2:17168799-17168818 None:intergenic 60.0%
GCATCTAGTGGGGTTGCGGT+AGG - chr2.2:17169795-17169814 MS.gene060619:intron 60.0%
GGGTTGCGGTAGGTGGTAGT+GGG - chr2.2:17169805-17169824 MS.gene060619:intron 60.0%
TCTAGTGGGGTTGCGGTAGG+TGG - chr2.2:17169798-17169817 MS.gene060619:intron 60.0%
! AATGCGCCGGTACAGTGCTG+TGG - chr2.2:17168901-17168920 MS.gene060619:intron 60.0%
!! CGGTAGGTGGTAGTGGGTCA+GGG - chr2.2:17169811-17169830 MS.gene060619:intron 60.0%
!! GGTAGGTGGTAGTGGGTCAG+GGG - chr2.2:17169812-17169831 MS.gene060619:intron 60.0%
!! GTAGGTGGTAGTGGGTCAGG+GGG - chr2.2:17169813-17169832 MS.gene060619:intron 60.0%
!! TGGTAGTGGGTCAGGGGGTT+AGG - chr2.2:17169818-17169837 MS.gene060619:intron 60.0%
!! TGTTTTCAGGGCCTGCCACC+TGG - chr2.2:17170390-17170409 MS.gene060619:intron 60.0%
AACCAGTTGGGGAGGGAGGG+AGG + chr2.2:17169670-17169689 None:intergenic 65.0%
ACCAGTTGGGGAGGGAGGGA+GGG + chr2.2:17169669-17169688 None:intergenic 65.0%
GGGGTTGCGGTAGGTGGTAG+TGG - chr2.2:17169804-17169823 MS.gene060619:intron 65.0%
! GGCTTGCTTTGCCAGGTGGC+AGG + chr2.2:17170404-17170423 None:intergenic 65.0%
!! GCGGTAGGTGGTAGTGGGTC+AGG - chr2.2:17169810-17169829 MS.gene060619:intron 65.0%
AGTTGGGGAGGGAGGGAGGG+AGG + chr2.2:17169666-17169685 None:intergenic 70.0%
GCGTGCGTCTGTGCCGTGTC+CGG - chr2.2:17166682-17166701 MS.gene060619:intron 70.0%
GTTGGGGAGGGAGGGAGGGA+GGG + chr2.2:17169665-17169684 None:intergenic 70.0%
TCCCTCCCTCCCTCCCCAAC+TGG - chr2.2:17169665-17169684 MS.gene060619:intron 70.0%
AGGGAGGGAGGGAGGGAGGG+AGG + chr2.2:17169632-17169651 None:intergenic 75.0%
GAGGGAGGGAGGGAGGGAGG+GGG + chr2.2:17169633-17169652 None:intergenic 75.0%
GAGGGAGGGAGGGAGGGGGA+GGG + chr2.2:17169629-17169648 None:intergenic 75.0%
GAGGGAGGGAGGGGGAGGGA+GGG + chr2.2:17169651-17169670 None:intergenic 75.0%
GAGGGAGGGGGAGGGAGGGA+GGG + chr2.2:17169647-17169666 None:intergenic 75.0%
GAGGGGGAGGGAGGGAGGGA+GGG + chr2.2:17169643-17169662 None:intergenic 75.0%
GGAGGGAGGGAGGGAGGGAG+GGG + chr2.2:17169634-17169653 None:intergenic 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG + chr2.2:17169635-17169654 None:intergenic 75.0%
! GGAGGGAGGGAGGGAGGGGG+AGG + chr2.2:17169630-17169649 None:intergenic 80.0%
! GGAGGGAGGGAGGGGGAGGG+AGG + chr2.2:17169652-17169671 None:intergenic 80.0%
! GGAGGGAGGGGGAGGGAGGG+AGG + chr2.2:17169648-17169667 None:intergenic 80.0%
! GGAGGGGGAGGGAGGGAGGG+AGG + chr2.2:17169644-17169663 None:intergenic 80.0%
! GGGGAGGGAGGGAGGGAGGG+AGG + chr2.2:17169640-17169659 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 17166247 17171347 17166247 ID=MS.gene060619
chr2.2 mRNA 17166247 17171347 17166247 ID=MS.gene060619.t1;Parent=MS.gene060619
chr2.2 exon 17171272 17171347 17171272 ID=MS.gene060619.t1.exon1;Parent=MS.gene060619.t1
chr2.2 CDS 17171272 17171347 17171272 ID=cds.MS.gene060619.t1;Parent=MS.gene060619.t1
chr2.2 exon 17170098 17170404 17170098 ID=MS.gene060619.t1.exon2;Parent=MS.gene060619.t1
chr2.2 CDS 17170098 17170404 17170098 ID=cds.MS.gene060619.t1;Parent=MS.gene060619.t1
chr2.2 exon 17169895 17169982 17169895 ID=MS.gene060619.t1.exon3;Parent=MS.gene060619.t1
chr2.2 CDS 17169895 17169982 17169895 ID=cds.MS.gene060619.t1;Parent=MS.gene060619.t1
chr2.2 exon 17167271 17167380 17167271 ID=MS.gene060619.t1.exon4;Parent=MS.gene060619.t1
chr2.2 CDS 17167271 17167380 17167271 ID=cds.MS.gene060619.t1;Parent=MS.gene060619.t1
chr2.2 exon 17167047 17167195 17167047 ID=MS.gene060619.t1.exon5;Parent=MS.gene060619.t1
chr2.2 CDS 17167047 17167195 17167047 ID=cds.MS.gene060619.t1;Parent=MS.gene060619.t1
chr2.2 exon 17166247 17166308 17166247 ID=MS.gene060619.t1.exon6;Parent=MS.gene060619.t1
chr2.2 CDS 17166247 17166308 17166247 ID=cds.MS.gene060619.t1;Parent=MS.gene060619.t1
Gene Sequence

>MS.gene060619

ATGGCTTCTTCCACCAACGTCCGTGAGAACTTTGTCTATGTTGCAAAGCTAGCAGAACAAGCTGAACGCTATGATGGTTCTCTCTCTCTCTCTCTCTCTATGAAGTTTTGAACAGTGTTTATGGCTCTTCATTTTAATTGCTTTCAATTTTTTATCATGTTTTCACTAACTTTTACTTCTACCCATTTTCTCTTTCTTACTCATTACATTCTTTCTTTTCATAAAGTTTCAATTTTTACAAAAAAAAAAAACTTCACATTTTTTCTTTCTGCTTCATTGACCCATTACAAGAGTGTGGGTATGTGAAAGTAAAGTAATGTGATTTATGGATTTATTACAAGAGTGTGCCTATGAAGCACAGACACTCTACATGTGTCCGACACTGATACATATAATTACATTGAATTATGTGTGATTTTTATCAAACTATTAGCTGCGTGCGTCTGTGCCGTGTCCGGTGTTTGTGTCCGTATCCGTGCTTCATAGGCTGTGTGTGCAATTTTTTTAGTAAAGCCCAATTTAGTTCTCTAGAATTTTCTTGCGGCTCAATTTTGTCTACGAGAAAAAAATAATATCTAAACTAGTCTCTTCCGGTATTTTCATACCGGGGACAAATTATGTTTGGGTCATTATATTAGAGGAATTAATTTCTGAGGGACTAGTTTTGAGATTATTTTTTGTCGAAACTAAATTGGGCCGCTAGAAAATTGTGAGAGACTAAATCAGTTTTTTTTCAATCACTTCAGAAAAAGTACGGCTATCATCACTGCCGCGTAAACACCGGTAATAATTTAAGAAAGTAAATGTGGTCGAATGTAATCACTTGTGTTGGTGTCAGACATGGACATGTGTCGAACACCTTCAATTCAGGGCTTTGGTGTTTCATAGGTCTTTTGTATGAATTGTTTCAAGAAATTTGAATGATTTAGAATGTGGTGTGCAGAAATGGTGGAGGCAATGAAGAAACTGGCGAAGATGGATGTTGAACTAAGTGTGGAAGAGAGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGTTCTAGAAGAGCTTCATGGAGGATCTTATCATCAATTGAGCAGAAAGAAGAATCAAAAGGGAATGAATTGAATGTTAAGCGTATTAAGGAGTATAGGCAGAAGGTGGAGGCGGAGCTTTCCAACATTTGCAATGACATTATGATTATTATTGATGAGCATCTTATTCCATCTACTAATATTGCTGAATCCACCGTGTTTTATTATAAGATGTATGTTTATTTTTTCATTTGATCTTGTTGTTTGTGAGGTTATTTAATTAAGTGCTTTTGTTTTTGTGTTAGATTTTGGATTTTGAAAGTAATTTGAGTATTTGTTTGGATGTAGGAAAGGAGATTATTATCGGTATTTGGCGGAATTCAAAGCTGGCGATGAAAAGAAAGAGGTGGCGGATCTGTCACTTAAAGCATATCAGGTATTTACAATTTACTTGAAGTAACAACGTGATTGTCTTCGTAACATGAGTTTGCCTTAGGTCATGTTTGGATAACCAGCTTAATTAAATGCTTTTGTATAAACTATTTTCAAACTATTTTCTATAAACCATACACTATTTTCATAAGTTATCTTGGAGAGTTTATAAATAAGCTGAAAGCTGTTTGCATAAGCTTTCCAAAACAGTCTCACAACAAGGGTTATGCCAGTAGATGAATTTAAATAAGTCAATCCAAATAGACCCTTATACTTTCTTATGCCTAACCGCTGCTGACAAGGATAGATGAACTTTATGGTTTTTAATGTTAGCTGAAAATGTAGATGATATATTTAATGACTGAATCTCTTCACAGGCTTGTAATATATCAGGAAAATAATCATGCTTCAATAAATTTGTATCATAAGATTAGATGGGAATGTTTTCATCCTTATTATCCCCATTAAGATCCTGCTATGTACGAATAACTTTTATGTCATGGCTTATTGGGTCTAAGAATTTTATCTTAGGATCTTTGTGCCCTTTAATAAACTCTCTAGTACACCTTTTTTTGTTATACATTAGTGGGTTAGTTTAATCCTTTATATTTATGCTTCTTGCCTTGTTGGAGAACTTCATTTGGATTTATGTCCATAGTTTTGGTGCTAATCTAACTGTGTCTTTCAAGTCGCATGTTGCCTTTTACCAAATTGTTTCAAATTAAGTTTTACCAATACCATAACATTTTTTTTTTTGTTTAGATCTGGTGTGTAATGCATTAAGTTATGACATTGTGCATAGTCATTGATTTAATTGATCTATAATAATCTATGTTTTTCACTTAAAGGTTTTCCTTCCATACGACATCACAATTCAATTTCTCAAAGTAAAAATGTATAAGTAAAACTTGGTATTGCATGAATACTTTGGTGCCCTCTTAGGAACAAACATCTTCATTAGATGCTGAACAATCTTGTGTTTCCATGAAATGACAATATTATTATCCAGTAACTTAGTTATGCATTAATCCATCATGATTCTCTGTGTCATATTATGGAGGACTTAACCTGTTGTAGACGATTTGGCCACTGTTGTCAAACCGCAGCTGCAGCGGTGCTATAGCACCAGAGCACAGCTGACTTTGAACAAATCGTTATTGCTAAAAGATAAACTATTTAGGAAAAAGTGTTGTCAAATAGCGGCTAATGCGCCGGTACAGTGCTGTGGCGTTATAGAATTTGACAACTCTGGGTTTGCCTTGGCCGTTCATGTTTCATTTGATTATTTGTTGTATACAATTAAGGATTTTAACGAAGATAGCTTTATGTTACTCTCTAAAGAATCATTTGTTTACTTTCCATAATATGAAAAGATAGTTGATATAGGAAGAGCAGATTAAGCACCATGCAAGGAGGTATTTGTGGTCCAAGAAAATTGAGCTCAGTGTTATTACTGCTGAAGTTCTGAAAACAGAGGGCAGGCTAGAAAAAATGCATCTGATAGGGAGCAGTTGTGGGTGGTGATAGAGAGATAATTTATAGGGCACATGTCACAAATCTTTCCCAATTTGGTACCAATTTCTCGGCTTATTGTATTATCCTTTTGCACTAGTGACCATTTTATCATCATTATAGTTCTTGTTGTTAAGAGTTAAGACCGCGAGTTAGATCGTAGGATTGGACGATTTTATGACCTTACAGCCACTGGGCGATCTAACTCGCATGTAAATTTGTTTACTGGTGGGATTGCTTGCAAGATTGCTGAGATCGGTATATCTCAAGTGATCCTAAAAGTTCCATTATATTGGTCAAGTTTTGATTCTTTAAACCAATCTTTTAGCCAATATTTTACCTTAAAAATTACTCAGTCTCACGCAAGACACTAATTTTCTTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTCCCTCCCTCCCTCCCTCCCCAACTGGTTTTCAACAGACACCTCTACTGCTTCATTGCAGTCATCTCTGCCAACAAGCTCCTCGCTTTCATGTTTTTTCTTTCCCAAGTTCATCTGTACTTGTGCATTCTCATGGCATCTAGTGGGGTTGCGGTAGGTGGTAGTGGGTCAGGGGGTTAGGTGTCAATGGGTCAGTGCTAATTGTGAGTCATGGAATTTATGATTATCAAATTTCAGTTTTAAGTTTGCTTTAATGTTGTCATTTATAGTATTTTTCTTGTTTAGTGTATATGTTAGTGACTTGATAGAATTTATCATTTTGGTAGGATCTTATGATTCTTGTTACGATCGTATGTTTTACGATCATACTACCCCTAAGTAAGATTTCAATCTGGTGACCACCTTGGTTGGCATAGGTTTTAAAAGTTATGCTAGTCGTTTACAGTGTCTTTCCTTATTCTTCAATATATTTCAACTTAGTATTAGTGGAGAAAACTTGAAAAATTTCCAGGTCCAGACAAAGATTTCAACTGTTGTGTTGTGATTATTTGCAGACAGCTTCTGCCACTGCTGAGAATGAATTACAACCAACACATCCTATCCGATTGGGTCTGGCTCTAAATTTCTCAGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGTACGGGCGAAAATGTTTGTGTTAATGAGAACCGAGGCTGCTGCCAAATCGTAATTTTGCGTAATTTGTTTTCAGGGCCTGCCACCTGGCAAAGCAAGCCTTTGATGATGGTGTCTCAGAACTGGATACCCTAAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGCGAGACAACCTTACTTTATGGACTTCTGATATTCCAGAAGATGGTGGTAAGATACTTAAACGGCTTCCACACACACATGCACATATCAGTTTTCATCATTTCTTTCCCAACATTAAGTTGCTTCTTATTGGTGCTAATCAAGGTTATCAGAATCTTACGATATGTGATTCATGTTTTGATTTGATACAAAACTGAACCTAATCGATACGAATCCCTATTGTGTATCAATTTTGGATATGGATCTCATTTTGAATTCCTATTCATTATGATGAATCTTGATTTACTATGACGAATCCCAAAATCTATTTTAATAAATTACTACGTAAACTTAGTGCAGCCAACCATTTTTTTTTTTTGTCAAGTTTGTATAGCCAATCATTTTTCTCTTGTCACTTGATTTATGATTTGAATTTTGAATTATTTTGAGCTTCAAACATGTTATATCATCTTATAAGTTTGTTTTATCACTAGTCATCACTTAAAAATGCCATATTTTTATTGATTTTGTTTCTTAGTTCTTACAAATCATAATAAGATTTTATCACGATTTAGAACATAAGTCTTCTGATTCACGGTTTGAATCTTAATTTTATAACCATGGTGGTAATAGTTATTATGTGCATATGACAATTGTGGGAGCGAAAAATACAGTGAAGCTCGCGCACCAAGCACTCAATCTTAGCTTCTTATTGGACACGATATCTCAAACTTTTGTTCCTATGGTTTGAGTTATTTATATATGTTCTTTGGTCTAACAAGTTAAACTTCCAATTTTCCATTTCAGAGGACCAAAAAATGGAAAGCGCAACTAAGAGCGGTCAAGATGAAGATGAATTGGGTCGCTAA

Protein sequence

>MS.gene060619.t1

MASSTNVRENFVYVAKLAEQAERYDEMVEAMKKLAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIKEYRQKVEAELSNICNDIMIIIDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGDEKKEVADLSLKAYQTASATAENELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDGVSELDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMESATKSGQDEDELGR