Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25972.t1 | XP_024635366.1 | 98.1 | 413 | 5 | 1 | 1 | 413 | 1 | 410 | 1.30E-180 | 642.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25972.t1 | P52178 | 80.9 | 324 | 58 | 1 | 90 | 413 | 83 | 402 | 9.5e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25972.t1 | G7J5E5 | 98.1 | 413 | 5 | 1 | 1 | 413 | 1 | 410 | 9.7e-181 | 642.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059161 | MS.gene25972 | -0.802141 | 6.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25972.t1 | MTR_3g077640 | 97.821 | 413 | 6 | 1 | 1 | 413 | 1 | 410 | 0.0 | 809 |
| MS.gene25972.t1 | MTR_4g105630 | 78.431 | 306 | 64 | 1 | 107 | 412 | 79 | 382 | 5.23e-178 | 501 |
| MS.gene25972.t1 | MTR_4g105630 | 78.472 | 288 | 62 | 0 | 107 | 394 | 79 | 366 | 4.86e-168 | 476 |
| MS.gene25972.t1 | MTR_6g005480 | 69.632 | 326 | 96 | 1 | 90 | 412 | 90 | 415 | 3.84e-158 | 452 |
| MS.gene25972.t1 | MTR_4g105630 | 77.551 | 245 | 55 | 0 | 107 | 351 | 79 | 323 | 3.57e-139 | 402 |
| MS.gene25972.t1 | MTR_4g105630 | 77.674 | 215 | 48 | 0 | 107 | 321 | 79 | 293 | 7.99e-120 | 352 |
| MS.gene25972.t1 | MTR_3g049400 | 40.615 | 325 | 188 | 4 | 83 | 405 | 80 | 401 | 1.13e-67 | 220 |
| MS.gene25972.t1 | MTR_2g022700 | 39.769 | 347 | 190 | 6 | 75 | 405 | 52 | 395 | 5.09e-67 | 218 |
| MS.gene25972.t1 | MTR_2g029180 | 41.081 | 370 | 198 | 9 | 43 | 402 | 33 | 392 | 9.54e-67 | 218 |
| MS.gene25972.t1 | MTR_4g088350 | 38.235 | 340 | 189 | 7 | 85 | 413 | 69 | 398 | 1.32e-64 | 212 |
| MS.gene25972.t1 | MTR_5g044220 | 36.765 | 340 | 197 | 4 | 88 | 413 | 68 | 403 | 1.32e-62 | 207 |
| MS.gene25972.t1 | MTR_4g088350 | 40.141 | 284 | 148 | 7 | 139 | 413 | 17 | 287 | 2.25e-56 | 187 |
| MS.gene25972.t1 | MTR_4g131800 | 39.481 | 347 | 175 | 6 | 83 | 404 | 78 | 414 | 1.05e-55 | 198 |
| MS.gene25972.t1 | MTR_3g072380 | 29.630 | 324 | 196 | 14 | 103 | 409 | 3 | 311 | 1.35e-23 | 101 |
| MS.gene25972.t1 | MTR_1g030320 | 29.206 | 315 | 194 | 13 | 106 | 409 | 14 | 310 | 2.42e-22 | 97.4 |
| MS.gene25972.t1 | MTR_4g018760 | 27.181 | 298 | 195 | 8 | 120 | 405 | 20 | 307 | 4.47e-20 | 90.5 |
| MS.gene25972.t1 | MTR_3g070000 | 27.948 | 229 | 155 | 3 | 181 | 405 | 97 | 319 | 5.83e-18 | 84.7 |
| MS.gene25972.t1 | MTR_5g081710 | 28.511 | 235 | 156 | 4 | 173 | 405 | 79 | 303 | 4.06e-17 | 82.0 |
| MS.gene25972.t1 | MTR_3g462070 | 25.497 | 302 | 218 | 5 | 115 | 412 | 12 | 310 | 6.46e-17 | 81.3 |
| MS.gene25972.t1 | MTR_3g072380 | 32.418 | 182 | 102 | 7 | 106 | 278 | 15 | 184 | 1.29e-15 | 76.3 |
| MS.gene25972.t1 | MTR_8g090130 | 26.389 | 216 | 151 | 2 | 193 | 405 | 96 | 306 | 1.63e-15 | 77.4 |
| MS.gene25972.t1 | MTR_4g101860 | 26.923 | 234 | 164 | 4 | 178 | 409 | 122 | 350 | 1.17e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25972.t1 | AT5G33320 | 69.471 | 416 | 116 | 5 | 1 | 413 | 1 | 408 | 0.0 | 544 |
| MS.gene25972.t1 | AT3G01550 | 62.154 | 325 | 119 | 2 | 89 | 410 | 55 | 378 | 1.12e-134 | 391 |
| MS.gene25972.t1 | AT3G01550 | 60.923 | 325 | 118 | 3 | 89 | 410 | 55 | 373 | 2.06e-128 | 375 |
| MS.gene25972.t1 | AT5G17630 | 41.429 | 350 | 194 | 5 | 63 | 409 | 67 | 408 | 1.97e-75 | 241 |
| MS.gene25972.t1 | AT5G54800 | 41.956 | 317 | 178 | 3 | 92 | 404 | 73 | 387 | 4.00e-69 | 224 |
| MS.gene25972.t1 | AT1G61800 | 40.176 | 341 | 192 | 5 | 67 | 405 | 58 | 388 | 5.10e-67 | 218 |
| MS.gene25972.t1 | AT1G61800 | 40.176 | 341 | 192 | 5 | 67 | 405 | 58 | 388 | 6.66e-67 | 218 |
| MS.gene25972.t1 | AT5G46110 | 35.475 | 358 | 209 | 6 | 70 | 411 | 54 | 405 | 6.42e-65 | 213 |
| MS.gene25972.t1 | AT5G46110 | 36.111 | 360 | 208 | 7 | 70 | 413 | 54 | 407 | 1.05e-64 | 213 |
| MS.gene25972.t1 | AT5G46110 | 38.926 | 298 | 171 | 5 | 119 | 411 | 1 | 292 | 4.74e-63 | 205 |
| MS.gene25972.t1 | AT5G46110 | 34.167 | 360 | 204 | 7 | 70 | 413 | 54 | 396 | 3.98e-59 | 198 |
| MS.gene25972.t1 | AT1G21870 | 29.846 | 325 | 183 | 13 | 106 | 411 | 15 | 313 | 2.17e-24 | 103 |
| MS.gene25972.t1 | AT1G77610 | 28.037 | 321 | 204 | 11 | 99 | 409 | 2 | 305 | 3.16e-22 | 97.1 |
| MS.gene25972.t1 | AT4G03950 | 28.339 | 307 | 155 | 11 | 106 | 407 | 11 | 257 | 4.43e-21 | 92.8 |
| MS.gene25972.t1 | AT3G10290 | 25.733 | 307 | 210 | 6 | 109 | 405 | 54 | 352 | 1.69e-20 | 92.4 |
| MS.gene25972.t1 | AT3G11320 | 27.027 | 296 | 205 | 6 | 120 | 409 | 18 | 308 | 5.71e-19 | 87.4 |
| MS.gene25972.t1 | AT5G05820 | 27.055 | 292 | 203 | 5 | 120 | 405 | 18 | 305 | 9.61e-19 | 86.7 |
| MS.gene25972.t1 | AT1G43310 | 74.468 | 47 | 12 | 0 | 225 | 271 | 41 | 87 | 1.42e-17 | 77.8 |
| MS.gene25972.t1 | AT5G04160 | 26.349 | 315 | 208 | 8 | 104 | 405 | 3 | 306 | 1.50e-17 | 83.2 |
| MS.gene25972.t1 | AT1G12500 | 28.270 | 237 | 157 | 5 | 175 | 409 | 131 | 356 | 1.14e-15 | 78.2 |
| MS.gene25972.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene25972.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene25972.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene25972.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene25972.t1 | AT3G17430 | 25.168 | 298 | 199 | 8 | 129 | 413 | 28 | 314 | 6.95e-12 | 67.0 |
| MS.gene25972.t1 | AT3G17430 | 25.168 | 298 | 199 | 8 | 129 | 413 | 28 | 314 | 6.95e-12 | 67.0 |
| MS.gene25972.t1 | AT4G32390 | 23.708 | 329 | 226 | 8 | 98 | 413 | 2 | 318 | 1.26e-11 | 65.9 |
| MS.gene25972.t1 | AT5G11230 | 23.810 | 315 | 225 | 8 | 98 | 404 | 2 | 309 | 3.84e-11 | 64.7 |
Find 116 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATCCTTGTTCGGTTTA+TGG | 0.127694 | 3.3:+65893534 | MS.gene25972:CDS |
| GCGGAGTCACCAGCGCTTTC+GGG | 0.195666 | 3.3:-65893476 | None:intergenic |
| GGCGGAGTCACCAGCGCTTT+CGG | 0.269788 | 3.3:-65893477 | None:intergenic |
| GTCTCTCCTGTGAATGCTTT+TGG | 0.293260 | 3.3:+65896749 | MS.gene25972:CDS |
| CTCGCTATTGTGCATACTTT+GGG | 0.297295 | 3.3:+65894070 | MS.gene25972:CDS |
| GTCGTTGTTGTTAGATGATT+TGG | 0.302177 | 3.3:-65893291 | None:intergenic |
| TGAACTACAGTCACGGTTAC+AGG | 0.306882 | 3.3:-65893758 | None:intergenic |
| TTGCCGACGGAATGGGTAAC+AGG | 0.314706 | 3.3:-65896671 | None:intergenic |
| TGGGGTTGGTGTGGAGAGGG+AGG | 0.317556 | 3.3:-65893229 | None:intergenic |
| TGGTGTGGAGAGGGAGGGTA+GGG | 0.320081 | 3.3:-65893223 | None:intergenic |
| CGGCGGAGAGACGGAGGTTA+AGG | 0.320918 | 3.3:-65893268 | None:intergenic |
| ATCCTTTCTGCAATGTTCCT+TGG | 0.335342 | 3.3:+65894178 | MS.gene25972:CDS |
| ACGTAATGTTCTTAGCAAAA+AGG | 0.346379 | 3.3:+65894937 | MS.gene25972:CDS |
| CACCTTTCCAAGACTCATAT+TGG | 0.360488 | 3.3:-65894104 | None:intergenic |
| CTTCAGCTTGGATCCTTGTT+CGG | 0.377633 | 3.3:+65893527 | MS.gene25972:CDS |
| ACTCGCTATTGTGCATACTT+TGG | 0.384453 | 3.3:+65894069 | MS.gene25972:CDS |
| TTGGTGTGGAGAGGGAGGGT+AGG | 0.399116 | 3.3:-65893224 | None:intergenic |
| TTGTTTCTTTCAGGAATCAT+TGG | 0.401238 | 3.3:+65895071 | MS.gene25972:intron |
| CTGTTCTTGTAACCTTTATG+TGG | 0.412077 | 3.3:+65893795 | MS.gene25972:CDS |
| CTTCAATATTTACAACAAAC+AGG | 0.414806 | 3.3:+65893574 | MS.gene25972:CDS |
| AGGCCTACACCCTGGGTGAT+TGG | 0.426673 | 3.3:+65894685 | MS.gene25972:CDS |
| TTACTGAAGCCTCTTTCAAT+TGG | 0.432373 | 3.3:+65894749 | MS.gene25972:CDS |
| AGGGAGCGTCTGAAACGGTT+GGG | 0.432953 | 3.3:-65893248 | None:intergenic |
| AGCGCTTTCGGGGACGGAAG+TGG | 0.442160 | 3.3:-65893465 | None:intergenic |
| GGTTCACTCGTGCCTATTGT+TGG | 0.445657 | 3.3:+65894706 | MS.gene25972:CDS |
| ACAGCAGATTGCAGGTAAGC+AGG | 0.445859 | 3.3:-65895183 | None:intergenic |
| AGATACTCACAGCAGATTGC+AGG | 0.447914 | 3.3:-65895191 | None:intergenic |
| GAAAGAAGAGGAAGAGGAAG+AGG | 0.453405 | 3.3:-65893390 | None:intergenic |
| AGTGCAACTCCACCAACAAT+AGG | 0.455372 | 3.3:-65894718 | None:intergenic |
| GAGTGCAGCAAGAAGAGATC+TGG | 0.457303 | 3.3:-65895336 | None:intergenic |
| CTTCATTCACTCGTCAATCA+TGG | 0.462555 | 3.3:+65893354 | MS.gene25972:CDS |
| GAATTTGAAAGAAGAGGAAG+AGG | 0.466601 | 3.3:-65893396 | None:intergenic |
| CACACAATTGCCGACGGAAT+GGG | 0.466624 | 3.3:-65896678 | None:intergenic |
| TTCTGCAATGTTCCTTGGAG+AGG | 0.467903 | 3.3:+65894183 | MS.gene25972:CDS |
| GGTGTGGAGAGGGAGGGTAG+GGG | 0.472217 | 3.3:-65893222 | None:intergenic |
| TAGATTTAGAGCCCACATAA+AGG | 0.472384 | 3.3:-65893807 | None:intergenic |
| GGCGGAGAGACGGAGGTTAA+GGG | 0.474532 | 3.3:-65893267 | None:intergenic |
| GAAGAGGAAGAGGAAGAGGA+AGG | 0.483385 | 3.3:-65893386 | None:intergenic |
| TGCTAAGAACATTACGTGAC+TGG | 0.485983 | 3.3:-65894931 | None:intergenic |
| GTCACCAGCGCTTTCGGGGA+CGG | 0.490017 | 3.3:-65893471 | None:intergenic |
| CAGATCTTACCAATTGAAAG+AGG | 0.491870 | 3.3:-65894758 | None:intergenic |
| ACTGTAGTTCAATTTGCTGT+TGG | 0.493045 | 3.3:+65893770 | MS.gene25972:CDS |
| GAGGGTAGGGGAGAGAGTGA+AGG | 0.493247 | 3.3:-65893210 | None:intergenic |
| TCACACAATTGCCGACGGAA+TGG | 0.493383 | 3.3:-65896679 | None:intergenic |
| GGGGTTGGTGTGGAGAGGGA+GGG | 0.496153 | 3.3:-65893228 | None:intergenic |
| TACTCACACAATTAAAGCTA+TGG | 0.496545 | 3.3:+65894138 | MS.gene25972:CDS |
| GCGTCTGAAACGGTTGGGGT+TGG | 0.501064 | 3.3:-65893243 | None:intergenic |
| CAGCAGATTGCAGGTAAGCA+GGG | 0.503249 | 3.3:-65895182 | None:intergenic |
| TGTTCTTGTAACCTTTATGT+GGG | 0.507076 | 3.3:+65893796 | MS.gene25972:CDS |
| TATTGTTGGTGGAGTTGCAC+TGG | 0.508448 | 3.3:+65894720 | MS.gene25972:CDS |
| GGTTGGGGTTGGTGTGGAGA+GGG | 0.509075 | 3.3:-65893232 | None:intergenic |
| AGCTCCCGCAGCTATCTTCA+TGG | 0.509736 | 3.3:+65895143 | MS.gene25972:CDS |
| TCGGGGACGGAAGTGGCTTG+AGG | 0.514782 | 3.3:-65893458 | None:intergenic |
| GCCTAAAATCACTGGTGCCA+TGG | 0.518278 | 3.3:+65893838 | MS.gene25972:CDS |
| GGTACCGCTATAGCTCTTGC+TGG | 0.520308 | 3.3:+65896866 | MS.gene25972:intron |
| CGGTTGGGGTTGGTGTGGAG+AGG | 0.521702 | 3.3:-65893233 | None:intergenic |
| AGGTCTGAATTTGAAAGAAG+AGG | 0.522741 | 3.3:-65893402 | None:intergenic |
| AAAGCATTCACAGGAGAGAC+AGG | 0.525906 | 3.3:-65896746 | None:intergenic |
| GAAGTAGGAACAAGAGGAAG+AGG | 0.529831 | 3.3:-65893422 | None:intergenic |
| CACCAATATGAGTCTTGGAA+AGG | 0.530315 | 3.3:+65894102 | MS.gene25972:CDS |
| GGCTTGAGGAGGAGAAAGAT+CGG | 0.533503 | 3.3:-65893444 | None:intergenic |
| TACAAGAGGCCTAAAATCAC+TGG | 0.538197 | 3.3:+65893830 | MS.gene25972:CDS |
| TTCTTACATGATATTGCAGA+GGG | 0.548286 | 3.3:+65896643 | MS.gene25972:CDS |
| AGATCGGAAGTAGGAACAAG+AGG | 0.551121 | 3.3:-65893428 | None:intergenic |
| AGAGGAAGAGGAAGGAGACA+TGG | 0.552637 | 3.3:-65893378 | None:intergenic |
| CCCTCCATGAAGATAGCTGC+GGG | 0.553556 | 3.3:-65895147 | None:intergenic |
| GGAGGAGAAAGATCGGAAGT+AGG | 0.554082 | 3.3:-65893437 | None:intergenic |
| GGGAGCGTCTGAAACGGTTG+GGG | 0.557883 | 3.3:-65893247 | None:intergenic |
| ATGATTTGGCGGCGGAGAGA+CGG | 0.559649 | 3.3:-65893277 | None:intergenic |
| TGCCGACGGAATGGGTAACA+GGG | 0.564452 | 3.3:-65896670 | None:intergenic |
| ACTTCCGTCCCCGAAAGCGC+TGG | 0.564558 | 3.3:+65893467 | MS.gene25972:CDS |
| TCTTTACCAAAAGCATTCAC+AGG | 0.565255 | 3.3:-65896755 | None:intergenic |
| TCACTCGTGCCTATTGTTGG+TGG | 0.566205 | 3.3:+65894709 | MS.gene25972:CDS |
| AAGGGAGCGTCTGAAACGGT+TGG | 0.567588 | 3.3:-65893249 | None:intergenic |
| CTAACAGAGGCCTACACCCT+GGG | 0.568546 | 3.3:+65894678 | MS.gene25972:intron |
| AACTCACTTGCTGATACGCA+TGG | 0.568987 | 3.3:-65895364 | None:intergenic |
| GGCTGGATTTGCGAGTGCAA+TGG | 0.570606 | 3.3:+65894892 | MS.gene25972:CDS |
| GAACCAATCACCCAGGGTGT+AGG | 0.571373 | 3.3:-65894688 | None:intergenic |
| TCTAACAGAGGCCTACACCC+TGG | 0.571500 | 3.3:+65894677 | MS.gene25972:intron |
| CAATATGAGTCTTGGAAAGG+TGG | 0.571553 | 3.3:+65894105 | MS.gene25972:CDS |
| AAAGGTCATGGTTAAGCAAG+AGG | 0.575123 | 3.3:+65894955 | MS.gene25972:CDS |
| TCCCCTGTTACCCATTCCGT+CGG | 0.576931 | 3.3:+65896668 | MS.gene25972:CDS |
| GTTGTTGTTAGATGATTTGG+CGG | 0.577181 | 3.3:-65893288 | None:intergenic |
| GAAAGGATGACAGAAAAGAA+AGG | 0.577210 | 3.3:-65894163 | None:intergenic |
| AGGGGAGAGAGTGAAGGCTG+TGG | 0.579441 | 3.3:-65893204 | None:intergenic |
| TATTGAAGTAGATGTTGAAG+AGG | 0.581047 | 3.3:-65893559 | None:intergenic |
| TCGCTATTGTGCATACTTTG+GGG | 0.588012 | 3.3:+65894071 | MS.gene25972:CDS |
| GAACTACAGTCACGGTTACA+GGG | 0.591540 | 3.3:-65893757 | None:intergenic |
| AACGACGGCGTAAATCTCAA+TGG | 0.595180 | 3.3:+65893308 | MS.gene25972:CDS |
| TGAAACGGTTGGGGTTGGTG+TGG | 0.596713 | 3.3:-65893238 | None:intergenic |
| GGTTAAGGGAGCGTCTGAAA+CGG | 0.598374 | 3.3:-65893253 | None:intergenic |
| GGGACGGAAGTGGCTTGAGG+AGG | 0.601394 | 3.3:-65893455 | None:intergenic |
| CTCCAAGGAACATTGCAGAA+AGG | 0.601742 | 3.3:-65894180 | None:intergenic |
| ACGTGACTGGTTTGTCACAT+TGG | 0.602709 | 3.3:-65894918 | None:intergenic |
| AGCAAATTGAACTACAGTCA+CGG | 0.606377 | 3.3:-65893765 | None:intergenic |
| CCCGCAGCTATCTTCATGGA+GGG | 0.610657 | 3.3:+65895147 | MS.gene25972:CDS |
| TTTCTTACATGATATTGCAG+AGG | 0.611685 | 3.3:+65896642 | MS.gene25972:CDS |
| GTTGTTAGATGATTTGGCGG+CGG | 0.614664 | 3.3:-65893285 | None:intergenic |
| CGGAGTCACCAGCGCTTTCG+GGG | 0.619544 | 3.3:-65893475 | None:intergenic |
| AACGCCAGCAAGAGCTATAG+CGG | 0.629902 | 3.3:-65896870 | None:intergenic |
| TTAGCACTCTAACCTCTCCA+AGG | 0.630079 | 3.3:-65894195 | None:intergenic |
| TCCCGCAGCTATCTTCATGG+AGG | 0.630179 | 3.3:+65895146 | MS.gene25972:CDS |
| CAATTGTGTGAAGCGTGTTG+TGG | 0.634531 | 3.3:+65896691 | MS.gene25972:CDS |
| ATTTGGCGGCGGAGAGACGG+AGG | 0.634566 | 3.3:-65893274 | None:intergenic |
| AAAGTATGCACAATAGCGAG+TGG | 0.638254 | 3.3:-65894067 | None:intergenic |
| GAGGTACCATAAACCGAACA+AGG | 0.639078 | 3.3:-65893540 | None:intergenic |
| AGCAGATTGCAGGTAAGCAG+GGG | 0.639869 | 3.3:-65895181 | None:intergenic |
| CACGAGTGAACCAATCACCC+AGG | 0.642426 | 3.3:-65894695 | None:intergenic |
| GGGCTCTAAATCTATACAAG+AGG | 0.650564 | 3.3:+65893816 | MS.gene25972:CDS |
| ACGCTTCACACAATTGCCGA+CGG | 0.667607 | 3.3:-65896684 | None:intergenic |
| ACCCTCCATGAAGATAGCTG+CGG | 0.681078 | 3.3:-65895148 | None:intergenic |
| ACGAGTGAACCAATCACCCA+GGG | 0.685336 | 3.3:-65894694 | None:intergenic |
| GCCGACGGAATGGGTAACAG+GGG | 0.690384 | 3.3:-65896669 | None:intergenic |
| CAACGAACTAGACTCGGCGG+CGG | 0.699628 | 3.3:-65893495 | None:intergenic |
| AAATCATCTAACAACAACGA+CGG | 0.712539 | 3.3:+65893293 | MS.gene25972:CDS |
| TAGCAACGAACTAGACTCGG+CGG | 0.750243 | 3.3:-65893498 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAAATCTATGAAACA+CGG | + | chr3.3:65893881-65893900 | MS.gene25972:intron | 15.0% |
| !! | TACAAAATATTAACAAATAG+CGG | - | chr3.3:65894507-65894526 | None:intergenic | 15.0% |
| !!! | ACCAATAATAATTTTAGAAT+AGG | + | chr3.3:65893931-65893950 | MS.gene25972:intron | 15.0% |
| !!! | CTCTCATTATATTTTTTTAT+AGG | + | chr3.3:65896845-65896864 | MS.gene25972:intron | 15.0% |
| !!! | TCCTATTCTAAAATTATTAT+TGG | - | chr3.3:65893935-65893954 | None:intergenic | 15.0% |
| !! | AAAAAATATAATGAGAGTGA+AGG | - | chr3.3:65896842-65896861 | None:intergenic | 20.0% |
| !! | AAAAATATAATGAGAGTGAA+GGG | - | chr3.3:65896841-65896860 | None:intergenic | 20.0% |
| !! | AATACATTTGATGTATTCTA+AGG | + | chr3.3:65894616-65894635 | MS.gene25972:intron | 20.0% |
| !! | AATTGAGATGAAATAAATGA+GGG | - | chr3.3:65895709-65895728 | None:intergenic | 20.0% |
| !! | GAACAAGATTAAATTTAAAC+CGG | - | chr3.3:65894321-65894340 | None:intergenic | 20.0% |
| !! | TGTGTAATTGAAATTCTAAA+AGG | - | chr3.3:65895663-65895682 | None:intergenic | 20.0% |
| !!! | ACTCTTTTGATATATTTCTA+TGG | + | chr3.3:65894432-65894451 | MS.gene25972:intron | 20.0% |
| !!! | AGAGTATTTTATTTTCAATG+TGG | + | chr3.3:65893698-65893717 | MS.gene25972:intron | 20.0% |
| !!! | AGTAATATTTTTCTGTGAAT+GGG | + | chr3.3:65896611-65896630 | MS.gene25972:intron | 20.0% |
| !!! | ATTCCTTTAAAGAAAATAGA+GGG | - | chr3.3:65895429-65895448 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTAATGAACGTC+AGG | + | chr3.3:65895954-65895973 | MS.gene25972:intron | 20.0% |
| ! | ACTTAAGCAACACTTAAATT+GGG | + | chr3.3:65895831-65895850 | MS.gene25972:intron | 25.0% |
| ! | ATACATTATCTTTCTTGACA+GGG | + | chr3.3:65895290-65895309 | MS.gene25972:intron | 25.0% |
| ! | ATATTACTCTTTCATTGCAT+TGG | - | chr3.3:65896599-65896618 | None:intergenic | 25.0% |
| ! | CATAAAATGTCTTCTTGAAT+GGG | - | chr3.3:65895011-65895030 | None:intergenic | 25.0% |
| ! | CTTCAATATTTACAACAAAC+AGG | + | chr3.3:65893574-65893593 | MS.gene25972:CDS | 25.0% |
| ! | GAATTGAGATGAAATAAATG+AGG | - | chr3.3:65895710-65895729 | None:intergenic | 25.0% |
| ! | GCATGTTATAAAACATTTCA+CGG | - | chr3.3:65895583-65895602 | None:intergenic | 25.0% |
| ! | TACTTAAGCAACACTTAAAT+TGG | + | chr3.3:65895830-65895849 | MS.gene25972:intron | 25.0% |
| ! | TACTTCATAAGATAATCTAC+AGG | - | chr3.3:65896438-65896457 | None:intergenic | 25.0% |
| ! | TATACATTATCTTTCTTGAC+AGG | + | chr3.3:65895289-65895308 | MS.gene25972:intron | 25.0% |
| ! | TCATAAAATGTCTTCTTGAA+TGG | - | chr3.3:65895012-65895031 | None:intergenic | 25.0% |
| ! | TGAATTCTAATATGCTTTGA+TGG | + | chr3.3:65894857-65894876 | MS.gene25972:intron | 25.0% |
| !! | CATTCCTTTAAAGAAAATAG+AGG | - | chr3.3:65895430-65895449 | None:intergenic | 25.0% |
| !! | GAGTAATATTTTTCTGTGAA+TGG | + | chr3.3:65896610-65896629 | MS.gene25972:intron | 25.0% |
| !! | TGGTTTGTAAAGAAAAGATT+CGG | + | chr3.3:65894825-65894844 | MS.gene25972:intron | 25.0% |
| !!! | ACAATGATTTTGTTTCTTTC+AGG | + | chr3.3:65895062-65895081 | MS.gene25972:intron | 25.0% |
| !!! | CTTTGATGGATTATTGAATA+GGG | + | chr3.3:65894871-65894890 | MS.gene25972:intron | 25.0% |
| !!! | TCTAGCTTTTGTATTGTAAT+TGG | + | chr3.3:65894586-65894605 | MS.gene25972:intron | 25.0% |
| AAAGAAATGCTGACATATGA+AGG | + | chr3.3:65896504-65896523 | MS.gene25972:intron | 30.0% | |
| AAATCATCTAACAACAACGA+CGG | + | chr3.3:65893293-65893312 | MS.gene25972:CDS | 30.0% | |
| AAGAAATGCTGACATATGAA+GGG | + | chr3.3:65896505-65896524 | MS.gene25972:intron | 30.0% | |
| ACGTAATGTTCTTAGCAAAA+AGG | + | chr3.3:65894937-65894956 | MS.gene25972:CDS | 30.0% | |
| AGACTAATTACAGTAACCAA+TGG | - | chr3.3:65894254-65894273 | None:intergenic | 30.0% | |
| AGTATGCATCAAACTATTAC+CGG | + | chr3.3:65894299-65894318 | MS.gene25972:intron | 30.0% | |
| ATTGTTTCGATTTCTAACAG+AGG | + | chr3.3:65894665-65894684 | MS.gene25972:intron | 30.0% | |
| CTTAAGCAACACTTAAATTG+GGG | + | chr3.3:65895832-65895851 | MS.gene25972:intron | 30.0% | |
| GACAAAGAACTATAAGCAAA+AGG | - | chr3.3:65895496-65895515 | None:intergenic | 30.0% | |
| GAGAAAATAGATCTCATGAA+AGG | - | chr3.3:65893615-65893634 | None:intergenic | 30.0% | |
| TACATTATCTTTCTTGACAG+GGG | + | chr3.3:65895291-65895310 | MS.gene25972:intron | 30.0% | |
| TACTCACACAATTAAAGCTA+TGG | + | chr3.3:65894138-65894157 | MS.gene25972:CDS | 30.0% | |
| TATTGAAGTAGATGTTGAAG+AGG | - | chr3.3:65893562-65893581 | None:intergenic | 30.0% | |
| TCTGTTAGAAATCGAAACAA+TGG | - | chr3.3:65894666-65894685 | None:intergenic | 30.0% | |
| TGCATTGAAAGATAAGGAAA+TGG | - | chr3.3:65896389-65896408 | None:intergenic | 30.0% | |
| TGCTTATAGTTCTTTGTCTT+TGG | + | chr3.3:65895498-65895517 | MS.gene25972:intron | 30.0% | |
| TGTTCTTGTAACCTTTATGT+GGG | + | chr3.3:65893796-65893815 | MS.gene25972:CDS | 30.0% | |
| TTCTTACATGATATTGCAGA+GGG | + | chr3.3:65896643-65896662 | MS.gene25972:CDS | 30.0% | |
| TTGTTCAAATTCTGCTATGA+TGG | + | chr3.3:65894557-65894576 | MS.gene25972:intron | 30.0% | |
| TTTCTTACATGATATTGCAG+AGG | + | chr3.3:65896642-65896661 | MS.gene25972:CDS | 30.0% | |
| ! | ATATGTCAGCATTTCTTTTC+AGG | - | chr3.3:65896502-65896521 | None:intergenic | 30.0% |
| ! | CTCGACTATAAATTTGCTTT+AGG | - | chr3.3:65896001-65896020 | None:intergenic | 30.0% |
| ! | GAGTAATAGAGTACACTTTT+AGG | + | chr3.3:65895868-65895887 | MS.gene25972:intron | 30.0% |
| ! | TATGTTTTGTGTTTTCGCAA+CGG | + | chr3.3:65893672-65893691 | MS.gene25972:intron | 30.0% |
| ! | TCAAAGTTTAGGGTGAAAAA+AGG | - | chr3.3:65896195-65896214 | None:intergenic | 30.0% |
| ! | TCTCGTTTGTTAAAGTTGAT+AGG | + | chr3.3:65895211-65895230 | MS.gene25972:intron | 30.0% |
| ! | TGTCCCTCTATTTTCTTTAA+AGG | + | chr3.3:65895423-65895442 | MS.gene25972:intron | 30.0% |
| ! | TTGTTTCTTTCAGGAATCAT+TGG | + | chr3.3:65895071-65895090 | MS.gene25972:intron | 30.0% |
| !! | GCTTTGATGGATTATTGAAT+AGG | + | chr3.3:65894870-65894889 | MS.gene25972:intron | 30.0% |
| !! | GTTCAAAAGTATTCTAACGT+CGG | - | chr3.3:65896367-65896386 | None:intergenic | 30.0% |
| !! | TTTTTCTGTTCTAGTCTTCT+AGG | + | chr3.3:65895392-65895411 | MS.gene25972:intron | 30.0% |
| !!! | TTTTTTCACCCTAAACTTTG+AGG | + | chr3.3:65896194-65896213 | MS.gene25972:intron | 30.0% |
| AGCAAATTGAACTACAGTCA+CGG | - | chr3.3:65893768-65893787 | None:intergenic | 35.0% | |
| AGGTCTGAATTTGAAAGAAG+AGG | - | chr3.3:65893405-65893424 | None:intergenic | 35.0% | |
| ATCCTATGTTACACTTAAGC+AGG | + | chr3.3:65896276-65896295 | MS.gene25972:intron | 35.0% | |
| CAACAGTGCATTGAAAGATA+AGG | - | chr3.3:65896395-65896414 | None:intergenic | 35.0% | |
| CAGATCTTACCAATTGAAAG+AGG | - | chr3.3:65894761-65894780 | None:intergenic | 35.0% | |
| CTGTTCTTGTAACCTTTATG+TGG | + | chr3.3:65893795-65893814 | MS.gene25972:CDS | 35.0% | |
| GAAAGGATGACAGAAAAGAA+AGG | - | chr3.3:65894166-65894185 | None:intergenic | 35.0% | |
| GAATGAAGAAGAAGAAGAAG+AGG | - | chr3.3:65893342-65893361 | None:intergenic | 35.0% | |
| GAATTTGAAAGAAGAGGAAG+AGG | - | chr3.3:65893399-65893418 | None:intergenic | 35.0% | |
| GACACTTAAGATGAGAATGA+GGG | - | chr3.3:65895607-65895626 | None:intergenic | 35.0% | |
| GACATATGAAGGGAAAATAG+TGG | + | chr3.3:65896515-65896534 | MS.gene25972:intron | 35.0% | |
| GCAAGAGGTAATATGATCTT+TGG | + | chr3.3:65894970-65894989 | MS.gene25972:intron | 35.0% | |
| GCTTAAGTGTAACATAGGAT+AGG | - | chr3.3:65896276-65896295 | None:intergenic | 35.0% | |
| TCCTATGTTACACTTAAGCA+GGG | + | chr3.3:65896277-65896296 | MS.gene25972:intron | 35.0% | |
| TGATAGGATTGTTGTATCAC+AGG | + | chr3.3:65895227-65895246 | MS.gene25972:intron | 35.0% | |
| TGGTAAAGATTGCTTCTTTC+TGG | + | chr3.3:65896769-65896788 | MS.gene25972:intron | 35.0% | |
| TGTTCTTAGCAAAAAGGTCA+TGG | + | chr3.3:65894943-65894962 | MS.gene25972:CDS | 35.0% | |
| TTACTGAAGCCTCTTTCAAT+TGG | + | chr3.3:65894749-65894768 | MS.gene25972:CDS | 35.0% | |
| TTGCTAAAAACTCTTCAGCT+TGG | + | chr3.3:65893515-65893534 | MS.gene25972:CDS | 35.0% | |
| TTTAGGCCTCTAAACATGTT+GGG | - | chr3.3:65895984-65896003 | None:intergenic | 35.0% | |
| ! | ATGAGGGCTTTAGTAGAAAA+AGG | - | chr3.3:65895693-65895712 | None:intergenic | 35.0% |
| ! | ATGTGGATTTTCCTTTTTGC+AGG | + | chr3.3:65893715-65893734 | MS.gene25972:intron | 35.0% |
| ! | CTGTGGATTGCATAAAACAA+TGG | + | chr3.3:65894469-65894488 | MS.gene25972:intron | 35.0% |
| ! | CTTTTCACCAATATGAGTCT+TGG | + | chr3.3:65894097-65894116 | MS.gene25972:CDS | 35.0% |
| ! | GTCGTTGTTGTTAGATGATT+TGG | - | chr3.3:65893294-65893313 | None:intergenic | 35.0% |
| ! | GTTGTTGTTAGATGATTTGG+CGG | - | chr3.3:65893291-65893310 | None:intergenic | 35.0% |
| ! | TAGATTTAGAGCCCACATAA+AGG | - | chr3.3:65893810-65893829 | None:intergenic | 35.0% |
| ! | TTTTAGCAACGAACTAGACT+CGG | - | chr3.3:65893504-65893523 | None:intergenic | 35.0% |
| !! | ACTGTAGTTCAATTTGCTGT+TGG | + | chr3.3:65893770-65893789 | MS.gene25972:CDS | 35.0% |
| !! | TCTTTACCAAAAGCATTCAC+AGG | - | chr3.3:65896758-65896777 | None:intergenic | 35.0% |
| !! | TTCCTTTTTGCAGGTTTTGA+AGG | + | chr3.3:65893724-65893743 | MS.gene25972:intron | 35.0% |
| !!! | TCAGCATTTCTTTTCAGGTT+AGG | - | chr3.3:65896497-65896516 | None:intergenic | 35.0% |
| AAAGGTCATGGTTAAGCAAG+AGG | + | chr3.3:65894955-65894974 | MS.gene25972:CDS | 40.0% | |
| AAAGTATGCACAATAGCGAG+TGG | - | chr3.3:65894070-65894089 | None:intergenic | 40.0% | |
| AAGATTGTAGTGCAACATCG+AGG | - | chr3.3:65894392-65894411 | None:intergenic | 40.0% | |
| AAGCAACACTTAAATTGGGG+TGG | + | chr3.3:65895835-65895854 | MS.gene25972:intron | 40.0% | |
| AAGTTGCAAGAACCTGATAG+GGG | + | chr3.3:65895455-65895474 | MS.gene25972:intron | 40.0% | |
| ACCCTGCTTAAGTGTAACAT+AGG | - | chr3.3:65896281-65896300 | None:intergenic | 40.0% | |
| ACTCGCTATTGTGCATACTT+TGG | + | chr3.3:65894069-65894088 | MS.gene25972:CDS | 40.0% | |
| AGCCTCTTGACTAACTAAGT+TGG | + | chr3.3:65896107-65896126 | MS.gene25972:intron | 40.0% | |
| AGTAACCAATGGCATATTGC+GGG | - | chr3.3:65894243-65894262 | None:intergenic | 40.0% | |
| ATCCTTTCTGCAATGTTCCT+TGG | + | chr3.3:65894178-65894197 | MS.gene25972:CDS | 40.0% | |
| CAATATGAGTCTTGGAAAGG+TGG | + | chr3.3:65894105-65894124 | MS.gene25972:CDS | 40.0% | |
| CACCAATATGAGTCTTGGAA+AGG | + | chr3.3:65894102-65894121 | MS.gene25972:CDS | 40.0% | |
| CACCTTTCCAAGACTCATAT+TGG | - | chr3.3:65894107-65894126 | None:intergenic | 40.0% | |
| CAGTAACCAATGGCATATTG+CGG | - | chr3.3:65894244-65894263 | None:intergenic | 40.0% | |
| CGACACTTAAGATGAGAATG+AGG | - | chr3.3:65895608-65895627 | None:intergenic | 40.0% | |
| CTCGCTATTGTGCATACTTT+GGG | + | chr3.3:65894070-65894089 | MS.gene25972:CDS | 40.0% | |
| CTTCATTCACTCGTCAATCA+TGG | + | chr3.3:65893354-65893373 | MS.gene25972:CDS | 40.0% | |
| CTTTAGGCCTCTAAACATGT+TGG | - | chr3.3:65895985-65896004 | None:intergenic | 40.0% | |
| GAAGTTGCAAGAACCTGATA+GGG | + | chr3.3:65895454-65895473 | MS.gene25972:intron | 40.0% | |
| GCCTCTTGACTAACTAAGTT+GGG | + | chr3.3:65896108-65896127 | MS.gene25972:intron | 40.0% | |
| TACAAGAGGCCTAAAATCAC+TGG | + | chr3.3:65893830-65893849 | MS.gene25972:CDS | 40.0% | |
| TCCCAACTTAGTTAGTCAAG+AGG | - | chr3.3:65896112-65896131 | None:intergenic | 40.0% | |
| TCGCTATTGTGCATACTTTG+GGG | + | chr3.3:65894071-65894090 | MS.gene25972:CDS | 40.0% | |
| TGAAGTTGCAAGAACCTGAT+AGG | + | chr3.3:65895453-65895472 | MS.gene25972:intron | 40.0% | |
| TGCCTTCAAAACCTGCAAAA+AGG | - | chr3.3:65893729-65893748 | None:intergenic | 40.0% | |
| TGCTAAGAACATTACGTGAC+TGG | - | chr3.3:65894934-65894953 | None:intergenic | 40.0% | |
| TGGTACAATGTTGTCAACTG+TGG | + | chr3.3:65894452-65894471 | MS.gene25972:intron | 40.0% | |
| TTAGGCCTCTAAACATGTTG+GGG | - | chr3.3:65895983-65896002 | None:intergenic | 40.0% | |
| TTATCTTTCTTGACAGGGGT+TGG | + | chr3.3:65895295-65895314 | MS.gene25972:intron | 40.0% | |
| TTGCTAGACTAAACTCTAGG+TGG | + | chr3.3:65895919-65895938 | MS.gene25972:intron | 40.0% | |
| TTGGATCCTTGTTCGGTTTA+TGG | + | chr3.3:65893534-65893553 | MS.gene25972:CDS | 40.0% | |
| ! | CAGGTGATTTTCTGTCAAGA+TGG | - | chr3.3:65896419-65896438 | None:intergenic | 40.0% |
| ! | CGCAAAATCATGGATTGCAA+CGG | - | chr3.3:65894345-65894364 | None:intergenic | 40.0% |
| ! | CGTTGCAATCCATGATTTTG+CGG | + | chr3.3:65894343-65894362 | MS.gene25972:intron | 40.0% |
| ! | TGCTTGCTAGACTAAACTCT+AGG | + | chr3.3:65895916-65895935 | MS.gene25972:intron | 40.0% |
| ! | TGGCGTTTTCTTCTACTCAA+GGG | + | chr3.3:65896886-65896905 | MS.gene25972:CDS | 40.0% |
| ! | TTTTTCCCGCAATATGCCAT+TGG | + | chr3.3:65894235-65894254 | MS.gene25972:intron | 40.0% |
| !! | GATGGATTATTGAATAGGGC+TGG | + | chr3.3:65894875-65894894 | MS.gene25972:intron | 40.0% |
| !! | GGGCTCTAAATCTATACAAG+AGG | + | chr3.3:65893816-65893835 | MS.gene25972:CDS | 40.0% |
| !! | TCTTCTTGAATGGGAGCATT+AGG | - | chr3.3:65895002-65895021 | None:intergenic | 40.0% |
| AACGACGGCGTAAATCTCAA+TGG | + | chr3.3:65893308-65893327 | MS.gene25972:CDS | 45.0% | |
| ACATCTCCCTGTTCAAACCT+TGG | - | chr3.3:65896086-65896105 | None:intergenic | 45.0% | |
| AGACTAGGGCCTCAAAGTTT+AGG | - | chr3.3:65896206-65896225 | None:intergenic | 45.0% | |
| AGATACTCACAGCAGATTGC+AGG | - | chr3.3:65895194-65895213 | None:intergenic | 45.0% | |
| AGATCGGAAGTAGGAACAAG+AGG | - | chr3.3:65893431-65893450 | None:intergenic | 45.0% | |
| AGTGCAACTCCACCAACAAT+AGG | - | chr3.3:65894721-65894740 | None:intergenic | 45.0% | |
| AGTTCGCAACCGCAAAATCA+TGG | - | chr3.3:65894355-65894374 | None:intergenic | 45.0% | |
| ATCAAATTCTGCCGAGTCCA+AGG | + | chr3.3:65896066-65896085 | MS.gene25972:intron | 45.0% | |
| ATGTGTCCTGTTCCTTCTAG+AGG | + | chr3.3:65894781-65894800 | MS.gene25972:intron | 45.0% | |
| CAATTGTGTGAAGCGTGTTG+TGG | + | chr3.3:65896691-65896710 | MS.gene25972:CDS | 45.0% | |
| CTCCAAGGAACATTGCAGAA+AGG | - | chr3.3:65894183-65894202 | None:intergenic | 45.0% | |
| CTTCAGCTTGGATCCTTGTT+CGG | + | chr3.3:65893527-65893546 | MS.gene25972:CDS | 45.0% | |
| GAAAGAAGAGGAAGAGGAAG+AGG | - | chr3.3:65893393-65893412 | None:intergenic | 45.0% | |
| GAACTACAGTCACGGTTACA+GGG | - | chr3.3:65893760-65893779 | None:intergenic | 45.0% | |
| GAAGTAGGAACAAGAGGAAG+AGG | - | chr3.3:65893425-65893444 | None:intergenic | 45.0% | |
| GACTAGGGCCTCAAAGTTTA+GGG | - | chr3.3:65896205-65896224 | None:intergenic | 45.0% | |
| GAGCAGAGAGCAAAATACCA+TGG | - | chr3.3:65893858-65893877 | None:intergenic | 45.0% | |
| TCAGTGTTTGTGTGAGTGTC+TGG | - | chr3.3:65893910-65893929 | None:intergenic | 45.0% | |
| TGAACTACAGTCACGGTTAC+AGG | - | chr3.3:65893761-65893780 | None:intergenic | 45.0% | |
| TGTACTCTATTACTCCCTCC+AGG | - | chr3.3:65895863-65895882 | None:intergenic | 45.0% | |
| TTAGCACTCTAACCTCTCCA+AGG | - | chr3.3:65894198-65894217 | None:intergenic | 45.0% | |
| TTCTGCAATGTTCCTTGGAG+AGG | + | chr3.3:65894183-65894202 | MS.gene25972:CDS | 45.0% | |
| ! | AAAGCATTCACAGGAGAGAC+AGG | - | chr3.3:65896749-65896768 | None:intergenic | 45.0% |
| ! | AACTCACTTGCTGATACGCA+TGG | - | chr3.3:65895367-65895386 | None:intergenic | 45.0% |
| ! | ACCATGGCACCAGTGATTTT+AGG | - | chr3.3:65893842-65893861 | None:intergenic | 45.0% |
| ! | ATTTTGCGGTTGCGAACTCA+AGG | + | chr3.3:65894357-65894376 | MS.gene25972:intron | 45.0% |
| ! | CTGGCGTTTTCTTCTACTCA+AGG | + | chr3.3:65896885-65896904 | MS.gene25972:CDS | 45.0% |
| ! | GAGGTACCATAAACCGAACA+AGG | - | chr3.3:65893543-65893562 | None:intergenic | 45.0% |
| ! | GTCTCTCCTGTGAATGCTTT+TGG | + | chr3.3:65896749-65896768 | MS.gene25972:CDS | 45.0% |
| ! | GTTGTTAGATGATTTGGCGG+CGG | - | chr3.3:65893288-65893307 | None:intergenic | 45.0% |
| ! | TATTGTTGGTGGAGTTGCAC+TGG | + | chr3.3:65894720-65894739 | MS.gene25972:CDS | 45.0% |
| ! | TTGCTGCTCAATGCATTGAC+TGG | + | chr3.3:65895893-65895912 | MS.gene25972:intron | 45.0% |
| !! | AAACTTTGAGGCCCTAGTCT+GGG | + | chr3.3:65896206-65896225 | MS.gene25972:intron | 45.0% |
| !! | ACGTGACTGGTTTGTCACAT+TGG | - | chr3.3:65894921-65894940 | None:intergenic | 45.0% |
| !! | CTTCTAGAGGTAGTGGAGAA+GGG | + | chr3.3:65894794-65894813 | MS.gene25972:intron | 45.0% |
| !! | TAAACTTTGAGGCCCTAGTC+TGG | + | chr3.3:65896205-65896224 | MS.gene25972:intron | 45.0% |
| !! | TTTTCTGTGAATGGGCTTGC+AGG | + | chr3.3:65896619-65896638 | MS.gene25972:intron | 45.0% |
| !!! | TGTTTTTATTTATTTTAAAA+AGG | - | chr3.3:65896024-65896043 | None:intergenic | 5.0% |
| AACGCCAGCAAGAGCTATAG+CGG | - | chr3.3:65896873-65896892 | None:intergenic | 50.0% | |
| ACAGCAGATTGCAGGTAAGC+AGG | - | chr3.3:65895186-65895205 | None:intergenic | 50.0% | |
| ACCCTCCATGAAGATAGCTG+CGG | - | chr3.3:65895151-65895170 | None:intergenic | 50.0% | |
| ACGAGTGAACCAATCACCCA+GGG | - | chr3.3:65894697-65894716 | None:intergenic | 50.0% | |
| ACGCTTCACACAATTGCCGA+CGG | - | chr3.3:65896687-65896706 | None:intergenic | 50.0% | |
| ACTTAAATTGGGGTGGAGCC+TGG | + | chr3.3:65895842-65895861 | MS.gene25972:intron | 50.0% | |
| AGAGGAAGAGGAAGGAGACA+TGG | - | chr3.3:65893381-65893400 | None:intergenic | 50.0% | |
| AGCAGATTGCAGGTAAGCAG+GGG | - | chr3.3:65895184-65895203 | None:intergenic | 50.0% | |
| AGTGGAGAAGGGATATGGCA+TGG | + | chr3.3:65894805-65894824 | MS.gene25972:intron | 50.0% | |
| CACACAATTGCCGACGGAAT+GGG | - | chr3.3:65896681-65896700 | None:intergenic | 50.0% | |
| CAGCAGATTGCAGGTAAGCA+GGG | - | chr3.3:65895185-65895204 | None:intergenic | 50.0% | |
| CCCTGTTCAAACCTTGGACT+CGG | - | chr3.3:65896080-65896099 | None:intergenic | 50.0% | |
| CCGAGTCCAAGGTTTGAACA+GGG | + | chr3.3:65896077-65896096 | MS.gene25972:intron | 50.0% | |
| CCTTCTCCACTACCTCTAGA+AGG | - | chr3.3:65894796-65894815 | None:intergenic | 50.0% | |
| GAAGAGGAAGAGGAAGAGGA+AGG | - | chr3.3:65893389-65893408 | None:intergenic | 50.0% | |
| GAGTGCAGCAAGAAGAGATC+TGG | - | chr3.3:65895339-65895358 | None:intergenic | 50.0% | |
| GGAGGAGAAAGATCGGAAGT+AGG | - | chr3.3:65893440-65893459 | None:intergenic | 50.0% | |
| GGCTTGAGGAGGAGAAAGAT+CGG | - | chr3.3:65893447-65893466 | None:intergenic | 50.0% | |
| GGTTCACTCGTGCCTATTGT+TGG | + | chr3.3:65894706-65894725 | MS.gene25972:CDS | 50.0% | |
| TAGCAACGAACTAGACTCGG+CGG | - | chr3.3:65893501-65893520 | None:intergenic | 50.0% | |
| TCACACAATTGCCGACGGAA+TGG | - | chr3.3:65896682-65896701 | None:intergenic | 50.0% | |
| TCACTCGTGCCTATTGTTGG+TGG | + | chr3.3:65894709-65894728 | MS.gene25972:CDS | 50.0% | |
| TTGCAAGAACCTGATAGGGG+AGG | + | chr3.3:65895458-65895477 | MS.gene25972:intron | 50.0% | |
| ! | CCACTACCTCTAGAAGGAAC+AGG | - | chr3.3:65894790-65894809 | None:intergenic | 50.0% |
| ! | CCTGTTCCTTCTAGAGGTAG+TGG | + | chr3.3:65894787-65894806 | MS.gene25972:intron | 50.0% |
| ! | GCCTAAAATCACTGGTGCCA+TGG | + | chr3.3:65893838-65893857 | MS.gene25972:CDS | 50.0% |
| ! | GCTGCATGTTTCTGACAGTG+TGG | + | chr3.3:65896307-65896326 | MS.gene25972:intron | 50.0% |
| !! | CCTTCTAGAGGTAGTGGAGA+AGG | + | chr3.3:65894793-65894812 | MS.gene25972:intron | 50.0% |
| !! | GAGGTAGTGGAGAAGGGATA+TGG | + | chr3.3:65894800-65894819 | MS.gene25972:intron | 50.0% |
| !! | GGTTAAGGGAGCGTCTGAAA+CGG | - | chr3.3:65893256-65893275 | None:intergenic | 50.0% |
| !! | GTTGATTAGCCTCCCCTATC+AGG | - | chr3.3:65895470-65895489 | None:intergenic | 50.0% |
| AAATTGGGGTGGAGCCTGGA+GGG | + | chr3.3:65895846-65895865 | MS.gene25972:intron | 55.0% | |
| AGAGCCAAGTAGCCCAGACT+AGG | - | chr3.3:65896221-65896240 | None:intergenic | 55.0% | |
| AGCTCCCGCAGCTATCTTCA+TGG | + | chr3.3:65895143-65895162 | MS.gene25972:CDS | 55.0% | |
| CACGAGTGAACCAATCACCC+AGG | - | chr3.3:65894698-65894717 | None:intergenic | 55.0% | |
| CCCGCAGCTATCTTCATGGA+GGG | + | chr3.3:65895147-65895166 | MS.gene25972:CDS | 55.0% | |
| CCCTCCATGAAGATAGCTGC+GGG | - | chr3.3:65895150-65895169 | None:intergenic | 55.0% | |
| CTAACAGAGGCCTACACCCT+GGG | + | chr3.3:65894678-65894697 | MS.gene25972:intron | 55.0% | |
| GAACCAATCACCCAGGGTGT+AGG | - | chr3.3:65894691-65894710 | None:intergenic | 55.0% | |
| GAGCCAAGTAGCCCAGACTA+GGG | - | chr3.3:65896220-65896239 | None:intergenic | 55.0% | |
| GCCGAGTCCAAGGTTTGAAC+AGG | + | chr3.3:65896076-65896095 | MS.gene25972:intron | 55.0% | |
| GGCTGGATTTGCGAGTGCAA+TGG | + | chr3.3:65894892-65894911 | MS.gene25972:CDS | 55.0% | |
| GGTACCGCTATAGCTCTTGC+TGG | + | chr3.3:65896866-65896885 | MS.gene25972:intron | 55.0% | |
| GGTCGCCCCAACATGTTTAG+AGG | + | chr3.3:65895975-65895994 | MS.gene25972:intron | 55.0% | |
| TAAATTGGGGTGGAGCCTGG+AGG | + | chr3.3:65895845-65895864 | MS.gene25972:intron | 55.0% | |
| TCCCCTGTTACCCATTCCGT+CGG | + | chr3.3:65896668-65896687 | MS.gene25972:CDS | 55.0% | |
| TCCCGCAGCTATCTTCATGG+AGG | + | chr3.3:65895146-65895165 | MS.gene25972:CDS | 55.0% | |
| TCTAACAGAGGCCTACACCC+TGG | + | chr3.3:65894677-65894696 | MS.gene25972:intron | 55.0% | |
| TGCCGACGGAATGGGTAACA+GGG | - | chr3.3:65896673-65896692 | None:intergenic | 55.0% | |
| TTGCCGACGGAATGGGTAAC+AGG | - | chr3.3:65896674-65896693 | None:intergenic | 55.0% | |
| ! | ATGATTTGGCGGCGGAGAGA+CGG | - | chr3.3:65893280-65893299 | None:intergenic | 55.0% |
| ! | GTCTGGGCTACTTGGCTCTT+CGG | + | chr3.3:65896222-65896241 | MS.gene25972:intron | 55.0% |
| !! | AAGGGAGCGTCTGAAACGGT+TGG | - | chr3.3:65893252-65893271 | None:intergenic | 55.0% |
| !! | AGGGAGCGTCTGAAACGGTT+GGG | - | chr3.3:65893251-65893270 | None:intergenic | 55.0% |
| !! | TGAAACGGTTGGGGTTGGTG+TGG | - | chr3.3:65893241-65893260 | None:intergenic | 55.0% |
| AGGCCCTAGTCTGGGCTACT+TGG | + | chr3.3:65896214-65896233 | MS.gene25972:intron | 60.0% | |
| AGGCCTACACCCTGGGTGAT+TGG | + | chr3.3:65894685-65894704 | MS.gene25972:CDS | 60.0% | |
| AGGGGAGAGAGTGAAGGCTG+TGG | - | chr3.3:65893207-65893226 | None:intergenic | 60.0% | |
| CAACGAACTAGACTCGGCGG+CGG | - | chr3.3:65893498-65893517 | None:intergenic | 60.0% | |
| GAGGGTAGGGGAGAGAGTGA+AGG | - | chr3.3:65893213-65893232 | None:intergenic | 60.0% | |
| GCCGACGGAATGGGTAACAG+GGG | - | chr3.3:65896672-65896691 | None:intergenic | 60.0% | |
| GGCGGAGAGACGGAGGTTAA+GGG | - | chr3.3:65893270-65893289 | None:intergenic | 60.0% | |
| TGGTGTGGAGAGGGAGGGTA+GGG | - | chr3.3:65893226-65893245 | None:intergenic | 60.0% | |
| TTGGTGTGGAGAGGGAGGGT+AGG | - | chr3.3:65893227-65893246 | None:intergenic | 60.0% | |
| ! | GCGTCTGAAACGGTTGGGGT+TGG | - | chr3.3:65893246-65893265 | None:intergenic | 60.0% |
| !! | GGGAGCGTCTGAAACGGTTG+GGG | - | chr3.3:65893250-65893269 | None:intergenic | 60.0% |
| !! | GGTTGGGGTTGGTGTGGAGA+GGG | - | chr3.3:65893235-65893254 | None:intergenic | 60.0% |
| AGCGCTTTCGGGGACGGAAG+TGG | - | chr3.3:65893468-65893487 | None:intergenic | 65.0% | |
| ATTTGGCGGCGGAGAGACGG+AGG | - | chr3.3:65893277-65893296 | None:intergenic | 65.0% | |
| CGGAGTCACCAGCGCTTTCG+GGG | - | chr3.3:65893478-65893497 | None:intergenic | 65.0% | |
| CGGCGGAGAGACGGAGGTTA+AGG | - | chr3.3:65893271-65893290 | None:intergenic | 65.0% | |
| GCGGAGTCACCAGCGCTTTC+GGG | - | chr3.3:65893479-65893498 | None:intergenic | 65.0% | |
| GGCGGAGTCACCAGCGCTTT+CGG | - | chr3.3:65893480-65893499 | None:intergenic | 65.0% | |
| GGGACGGAAGTGGCTTGAGG+AGG | - | chr3.3:65893458-65893477 | None:intergenic | 65.0% | |
| GGTGTGGAGAGGGAGGGTAG+GGG | - | chr3.3:65893225-65893244 | None:intergenic | 65.0% | |
| GTCACCAGCGCTTTCGGGGA+CGG | - | chr3.3:65893474-65893493 | None:intergenic | 65.0% | |
| TCGGGGACGGAAGTGGCTTG+AGG | - | chr3.3:65893461-65893480 | None:intergenic | 65.0% | |
| ! | ACTTCCGTCCCCGAAAGCGC+TGG | + | chr3.3:65893467-65893486 | MS.gene25972:CDS | 65.0% |
| !! | CGGTTGGGGTTGGTGTGGAG+AGG | - | chr3.3:65893236-65893255 | None:intergenic | 65.0% |
| !! | GGGGTTGGTGTGGAGAGGGA+GGG | - | chr3.3:65893231-65893250 | None:intergenic | 65.0% |
| !! | TGGGGTTGGTGTGGAGAGGG+AGG | - | chr3.3:65893232-65893251 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 65893197 | 65896943 | 65893197 | ID=MS.gene25972 |
| chr3.3 | mRNA | 65893197 | 65896943 | 65893197 | ID=MS.gene25972.t1;Parent=MS.gene25972 |
| chr3.3 | exon | 65893197 | 65893595 | 65893197 | ID=MS.gene25972.t1.exon1;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65893197 | 65893595 | 65893197 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65893737 | 65893859 | 65893737 | ID=MS.gene25972.t1.exon2;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65893737 | 65893859 | 65893737 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65894052 | 65894204 | 65894052 | ID=MS.gene25972.t1.exon3;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65894052 | 65894204 | 65894052 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65894685 | 65894770 | 65894685 | ID=MS.gene25972.t1.exon4;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65894685 | 65894770 | 65894685 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65894892 | 65894976 | 65894892 | ID=MS.gene25972.t1.exon5;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65894892 | 65894976 | 65894892 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65895084 | 65895203 | 65895084 | ID=MS.gene25972.t1.exon6;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65895084 | 65895203 | 65895084 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65895311 | 65895379 | 65895311 | ID=MS.gene25972.t1.exon7;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65895311 | 65895379 | 65895311 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65896641 | 65896770 | 65896641 | ID=MS.gene25972.t1.exon8;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65896641 | 65896770 | 65896641 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| chr3.3 | exon | 65896867 | 65896943 | 65896867 | ID=MS.gene25972.t1.exon9;Parent=MS.gene25972.t1 |
| chr3.3 | CDS | 65896867 | 65896943 | 65896867 | ID=cds.MS.gene25972.t1;Parent=MS.gene25972.t1 |
| Gene Sequence |
| Protein sequence |
