Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26158.t1 | Q40345.1 | 99.8 | 412 | 1 | 0 | 1 | 412 | 22 | 433 | 2.30E-241 | 844.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26158.t1 | Q40345 | 99.8 | 412 | 1 | 0 | 1 | 412 | 22 | 433 | 5.6e-244 | 844.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26158.t1 | G7KFV7 | 99.5 | 412 | 2 | 0 | 1 | 412 | 1 | 412 | 4.9e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055276 | MS.gene26158 | -0.81057 | 1.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26158.t1 | MTR_5g077070 | 99.515 | 412 | 2 | 0 | 1 | 412 | 1 | 412 | 0.0 | 849 |
| MS.gene26158.t1 | MTR_2g062840 | 86.375 | 411 | 56 | 0 | 1 | 411 | 1 | 411 | 0.0 | 759 |
| MS.gene26158.t1 | MTR_6g005470 | 81.975 | 405 | 72 | 1 | 6 | 410 | 73 | 476 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26158.t1 | AT1G65930 | 88.592 | 412 | 45 | 1 | 1 | 412 | 1 | 410 | 0.0 | 768 |
| MS.gene26158.t1 | AT1G54340 | 84.878 | 410 | 61 | 1 | 1 | 410 | 1 | 409 | 0.0 | 746 |
| MS.gene26158.t1 | AT5G14590 | 79.951 | 409 | 81 | 1 | 2 | 410 | 72 | 479 | 0.0 | 699 |
| MS.gene26158.t1 | AT1G54340 | 85.906 | 298 | 41 | 1 | 1 | 298 | 1 | 297 | 0.0 | 550 |
Find 107 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTACCCGTCATTTC+AGG | 0.205155 | 5.4:-57327099 | MS.gene26158:CDS |
| GCCACTGACTCGGTGATTAA+AGG | 0.234489 | 5.4:-57328667 | MS.gene26158:CDS |
| TGCTGGTTTCTCCACCCTTT+TGG | 0.261463 | 5.4:+57327071 | None:intergenic |
| TTCAATAAATACCAGGAATA+AGG | 0.281383 | 5.4:+57328808 | None:intergenic |
| AAAACCAGCTTCAGCTTTCC+TGG | 0.287132 | 5.4:+57328643 | None:intergenic |
| ATGGGCTGCTTCTGCTTCTA+TGG | 0.319299 | 5.4:+57327123 | None:intergenic |
| ATATGTTGACAGGGCAAAAC+TGG | 0.321227 | 5.4:-57326897 | MS.gene26158:intron |
| GATTTGGCACTTATTCTTCA+TGG | 0.329970 | 5.4:-57326791 | MS.gene26158:CDS |
| GCTTCTATGGTCTTTCCATC+AGG | 0.345727 | 5.4:+57327136 | None:intergenic |
| TGGGAAGATGACCAAGGATT+TGG | 0.355308 | 5.4:-57326807 | MS.gene26158:CDS |
| GTGGTCTCACCCTGGCCTTC+CGG | 0.358843 | 5.4:+57328529 | None:intergenic |
| GCATGCCTTCCAATACATAT+TGG | 0.365350 | 5.4:+57328709 | None:intergenic |
| ATGAAATGACCCGTATTATC+TGG | 0.366530 | 5.4:-57329779 | MS.gene26158:CDS |
| TGTATTGGAGTTGTAGAGTC+TGG | 0.370851 | 5.4:-57326827 | MS.gene26158:CDS |
| GAAGCTCGTGTCAAGGAGTT+TGG | 0.371216 | 5.4:-57329077 | MS.gene26158:CDS |
| AACATCCCTCGCCTTATTCC+TGG | 0.377795 | 5.4:-57328819 | MS.gene26158:intron |
| CCAGGGTGAGACCACCGATT+TGG | 0.378111 | 5.4:-57328521 | MS.gene26158:CDS |
| ATGTTTCTGATTGTTCCATT+TGG | 0.380317 | 5.4:+57329032 | None:intergenic |
| AGTATGAGGCTGCTGGTATA+TGG | 0.391774 | 5.4:-57328092 | MS.gene26158:intron |
| GACTCCTCCACATACTCTTC+AGG | 0.392513 | 5.4:+57329054 | None:intergenic |
| TGATATACTTCCAGATAATA+CGG | 0.410893 | 5.4:+57329769 | None:intergenic |
| AAGCTAGAGGCAGCTTGTAT+TGG | 0.414178 | 5.4:-57326842 | MS.gene26158:CDS |
| GCACCGGCTCATTGATGATA+TGG | 0.426422 | 5.4:-57327982 | MS.gene26158:CDS |
| CATATTTCAAGAAGTTTATG+AGG | 0.433565 | 5.4:-57328130 | MS.gene26158:CDS |
| GGATGCTATGCTATTTGTGC+TGG | 0.446890 | 5.4:+57327054 | None:intergenic |
| CCACTGACTCGGTGATTAAA+GGG | 0.449911 | 5.4:-57328666 | MS.gene26158:CDS |
| TCATTTCAGGGTTCACCAAA+AGG | 0.451552 | 5.4:-57327086 | MS.gene26158:CDS |
| ATTTATTGGTTAAAGATTCA+AGG | 0.453213 | 5.4:-57328154 | MS.gene26158:intron |
| TGATTTCAGGTTTGCCCTGA+TGG | 0.458547 | 5.4:-57327151 | MS.gene26158:intron |
| TTTCAAGAAGTTTATGAGGC+AGG | 0.458695 | 5.4:-57328126 | MS.gene26158:CDS |
| AGAGTGAAGGAGGTTATGTA+TGG | 0.460602 | 5.4:-57327944 | MS.gene26158:CDS |
| CGCCAATCCCATCGTTGAGA+TGG | 0.461209 | 5.4:-57330998 | MS.gene26158:CDS |
| TTCTTGCAACTAGGCTGTCT+AGG | 0.463457 | 5.4:-57326662 | MS.gene26158:intron |
| GGATGACAATGCTACACTCT+TGG | 0.467572 | 5.4:-57326876 | MS.gene26158:CDS |
| TGGACAAAGCCAATATGTAT+TGG | 0.468376 | 5.4:-57328718 | MS.gene26158:CDS |
| TGTATTGGAAGGCATGCTTT+TGG | 0.469894 | 5.4:-57328703 | MS.gene26158:CDS |
| AAGAATAAGTGCCAAATCCT+TGG | 0.470345 | 5.4:+57326796 | None:intergenic |
| GGGTTTGATGACTTCTGTAT+TGG | 0.471973 | 5.4:-57327750 | MS.gene26158:intron |
| GACAGTTACCCGTCATTTCA+GGG | 0.475980 | 5.4:-57327098 | MS.gene26158:CDS |
| ACAATTCTTAAGAAATATGA+TGG | 0.480666 | 5.4:-57328262 | MS.gene26158:CDS |
| AAGAAGTTTATGAGGCAGGC+TGG | 0.487955 | 5.4:-57328122 | MS.gene26158:CDS |
| CAGAGTGATTTCTTAGCTCA+AGG | 0.489025 | 5.4:-57327894 | MS.gene26158:intron |
| TCCATCTTTGCTTGGACAAG+AGG | 0.489775 | 5.4:-57327034 | MS.gene26158:CDS |
| ACCTCTTGTCCAAGCAAAGA+TGG | 0.491078 | 5.4:+57327033 | None:intergenic |
| CTGGAAGTATATCAAGGATA+AGG | 0.496867 | 5.4:-57329760 | MS.gene26158:intron |
| CAATGCAACACCTCCTTCAC+CGG | 0.504537 | 5.4:+57328483 | None:intergenic |
| GTCCATCTCAACGATGGGAT+TGG | 0.504713 | 5.4:+57330996 | None:intergenic |
| GTTTATAACTTCACCGGTGA+AGG | 0.506170 | 5.4:-57328496 | MS.gene26158:CDS |
| GCATAGCATCCATCTTTGCT+TGG | 0.511490 | 5.4:-57327042 | MS.gene26158:CDS |
| CTTCTATGGTCTTTCCATCA+GGG | 0.513807 | 5.4:+57327137 | None:intergenic |
| TCTTGCAACTAGGCTGTCTA+GGG | 0.516308 | 5.4:-57326661 | MS.gene26158:intron |
| GGGTGAGACCACCGATTTGG+AGG | 0.516484 | 5.4:-57328518 | MS.gene26158:CDS |
| GAAGTTATAAACCTCCAAAT+CGG | 0.520537 | 5.4:+57328507 | None:intergenic |
| GTATTGGAGTTGTAGAGTCT+GGG | 0.522399 | 5.4:-57326826 | MS.gene26158:CDS |
| CATTTCAGGGTTCACCAAAA+GGG | 0.523081 | 5.4:-57327085 | MS.gene26158:CDS |
| TCATCAGTCTCATCACGATA+AGG | 0.524711 | 5.4:+57329575 | None:intergenic |
| TTGGAGGTTTATAACTTCAC+CGG | 0.530673 | 5.4:-57328502 | MS.gene26158:CDS |
| CATCACGATAAGGAAGGCCT+AGG | 0.534182 | 5.4:+57329585 | None:intergenic |
| TTTGGTGAACCCTGAAATGA+CGG | 0.536064 | 5.4:+57327089 | None:intergenic |
| TTTGTAGTTCCGGAAGGCCA+GGG | 0.538541 | 5.4:-57328538 | MS.gene26158:intron |
| AGGCTGGAAATCAAAGTATG+AGG | 0.540407 | 5.4:-57328106 | MS.gene26158:CDS |
| AGGGCCAGGAAAGCTGAAGC+TGG | 0.546183 | 5.4:-57328647 | MS.gene26158:CDS |
| TCAATATCGGGCCACTGACT+CGG | 0.546877 | 5.4:-57328677 | MS.gene26158:CDS |
| AGTATGTGGAGGAGTCCAAA+TGG | 0.548669 | 5.4:-57329047 | MS.gene26158:CDS |
| AAATCAAAGTATGAGGCTGC+TGG | 0.551069 | 5.4:-57328099 | MS.gene26158:CDS |
| GACTCGGTGATTAAAGGGCC+AGG | 0.555372 | 5.4:-57328661 | MS.gene26158:CDS |
| GACATCAAGTACTTTGACCT+AGG | 0.560843 | 5.4:-57329602 | MS.gene26158:CDS |
| CCACCATATCATCAATGAGC+CGG | 0.562306 | 5.4:+57327979 | None:intergenic |
| AAGTGTGCAACTATCACTCC+AGG | 0.563401 | 5.4:-57329304 | MS.gene26158:intron |
| TATTATCTGGAAGTATATCA+AGG | 0.565173 | 5.4:-57329766 | MS.gene26158:CDS |
| AACCTCGTCAGTGTTGTACA+TGG | 0.567146 | 5.4:+57328459 | None:intergenic |
| CGGTGAAGGAGGTGTTGCAT+TGG | 0.567213 | 5.4:-57328482 | MS.gene26158:CDS |
| CCCTTTAATCACCGAGTCAG+TGG | 0.567575 | 5.4:+57328666 | None:intergenic |
| AGTTTGGCCTGAAGAGTATG+TGG | 0.575672 | 5.4:-57329061 | MS.gene26158:CDS |
| GATATACTTCCAGATAATAC+GGG | 0.575963 | 5.4:+57329770 | None:intergenic |
| CCAAATCGGTGGTCTCACCC+TGG | 0.579651 | 5.4:+57328521 | None:intergenic |
| AATCCCATCGTTGAGATGGA+CGG | 0.579795 | 5.4:-57330994 | MS.gene26158:intron |
| TAACCGTCCATCTCAACGAT+GGG | 0.583372 | 5.4:+57330991 | None:intergenic |
| CAAAGCCAATATGTATTGGA+AGG | 0.585098 | 5.4:-57328714 | MS.gene26158:CDS |
| TTCAGGGTTCACCAAAAGGG+TGG | 0.585742 | 5.4:-57327082 | MS.gene26158:CDS |
| GACAGATGAAGCTCGTGTCA+AGG | 0.586650 | 5.4:-57329084 | MS.gene26158:intron |
| GGACAAGAGGTCTAGCCCAT+AGG | 0.593822 | 5.4:-57327021 | MS.gene26158:intron |
| TTCTTAAGAAATATGATGGA+AGG | 0.594992 | 5.4:-57328258 | MS.gene26158:intron |
| TTGGTGAACCCTGAAATGAC+GGG | 0.610959 | 5.4:+57327090 | None:intergenic |
| GGATTTCACTGAAAAGCTAG+AGG | 0.613200 | 5.4:-57326855 | MS.gene26158:CDS |
| TAAATACCAGGAATAAGGCG+AGG | 0.613657 | 5.4:+57328813 | None:intergenic |
| TATAACTTCACCGGTGAAGG+AGG | 0.617817 | 5.4:-57328493 | MS.gene26158:CDS |
| CAGTCTCATCACGATAAGGA+AGG | 0.622102 | 5.4:+57329579 | None:intergenic |
| GCATATGCACTCAAGAGTGA+AGG | 0.624556 | 5.4:-57327957 | MS.gene26158:CDS |
| AATGACGGGTAACTGTCCCA+TGG | 0.626520 | 5.4:+57327104 | None:intergenic |
| CCGGCTCATTGATGATATGG+TGG | 0.626860 | 5.4:-57327979 | MS.gene26158:CDS |
| AGAGGAATTCATCGATGCTG+TGG | 0.629811 | 5.4:-57326622 | MS.gene26158:CDS |
| AAATACCAGGAATAAGGCGA+GGG | 0.630051 | 5.4:+57328814 | None:intergenic |
| ATAGAAGCAGAAGCAGCCCA+TGG | 0.631005 | 5.4:-57327121 | MS.gene26158:CDS |
| TAGAAGCAGAAGCAGCCCAT+GGG | 0.635643 | 5.4:-57327120 | MS.gene26158:CDS |
| GAGTGAAGGAGGTTATGTAT+GGG | 0.638514 | 5.4:-57327943 | MS.gene26158:CDS |
| CTTGAGCTAAGAAATCACTC+TGG | 0.639119 | 5.4:+57327895 | None:intergenic |
| TTGATGTCCAACTCCACGAA+GGG | 0.641675 | 5.4:+57329617 | None:intergenic |
| GTTATAAACCTCCAAATCGG+TGG | 0.643639 | 5.4:+57328510 | None:intergenic |
| ATGACGGGTAACTGTCCCAT+GGG | 0.647069 | 5.4:+57327105 | None:intergenic |
| TATGCACTCAAGAGTGAAGG+AGG | 0.651106 | 5.4:-57327954 | MS.gene26158:CDS |
| CTAACCGTCCATCTCAACGA+TGG | 0.685218 | 5.4:+57330990 | None:intergenic |
| GGAGCATTATTTGAACACAG+AGG | 0.687364 | 5.4:-57326640 | MS.gene26158:CDS |
| CTTGATGTCCAACTCCACGA+AGG | 0.690252 | 5.4:+57329616 | None:intergenic |
| TTGGCCTGAAGAGTATGTGG+AGG | 0.691036 | 5.4:-57329058 | MS.gene26158:CDS |
| GGCCATGTACAACACTGACG+AGG | 0.710277 | 5.4:-57328461 | MS.gene26158:intron |
| AGAGTCTGGGAAGATGACCA+AGG | 0.742586 | 5.4:-57326813 | MS.gene26158:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTAAAATAATATGTT+AGG | + | chr5.4:57328347-57328366 | None:intergenic | 10.0% |
| !! | AAATACTATAACTAAAAATT+CGG | + | chr5.4:57328172-57328191 | None:intergenic | 10.0% |
| !! | AATAAAATAATACAATACTT+TGG | + | chr5.4:57327336-57327355 | None:intergenic | 10.0% |
| !! | AATTAATTGTATTCATTTAT+TGG | - | chr5.4:57329443-57329462 | MS.gene26158:intron | 10.0% |
| !! | ATGAATACAATTAATTAAAT+AGG | + | chr5.4:57329439-57329458 | None:intergenic | 10.0% |
| !! | AAAAAAATTCAATAAATACC+AGG | + | chr5.4:57328813-57328832 | None:intergenic | 15.0% |
| !! | AAATAAAAACGATAGAAAAA+TGG | + | chr5.4:57326916-57326935 | None:intergenic | 15.0% |
| !! | ATATAATATAATCAAGATAC+CGG | - | chr5.4:57330676-57330695 | MS.gene26158:intron | 15.0% |
| !! | ATTAAATTAAAACATACTTG+AGG | + | chr5.4:57328092-57328111 | None:intergenic | 15.0% |
| !! | TAAGAAAATTACATAAAATG+TGG | - | chr5.4:57327570-57327589 | MS.gene26158:intron | 15.0% |
| !! | TTAAATTAAAACATACTTGA+GGG | + | chr5.4:57328091-57328110 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTGTTTTTTTGTT+TGG | - | chr5.4:57327084-57327103 | MS.gene26158:CDS | 15.0% |
| !!! | GTATAATTTTGAAACAAAAA+AGG | - | chr5.4:57327600-57327619 | MS.gene26158:intron | 15.0% |
| !!! | GTATTGTATTATTTTATTGT+TGG | - | chr5.4:57327338-57327357 | MS.gene26158:intron | 15.0% |
| !!! | TTTCTTAAGAATTGTATTTT+TGG | + | chr5.4:57329344-57329363 | None:intergenic | 15.0% |
| !! | AAAAATAACGAAACATAGAA+TGG | + | chr5.4:57326837-57326856 | None:intergenic | 20.0% |
| !! | AATATTTCAATGAAATATGC+TGG | - | chr5.4:57329214-57329233 | MS.gene26158:intron | 20.0% |
| !! | ACAATTCTTAAGAAATATGA+TGG | - | chr5.4:57329349-57329368 | MS.gene26158:intron | 20.0% |
| !! | ACAGTTAATGAAATTAAGTT+CGG | + | chr5.4:57328617-57328636 | None:intergenic | 20.0% |
| !! | ATATGAGTAGAGATATATAT+TGG | - | chr5.4:57328708-57328727 | MS.gene26158:CDS | 20.0% |
| !! | ATTAAGTATGTATCAGATTA+TGG | + | chr5.4:57330115-57330134 | None:intergenic | 20.0% |
| !! | GATATAATGTTGAGTTAAAT+CGG | - | chr5.4:57328201-57328220 | MS.gene26158:intron | 20.0% |
| !! | TAACTCAACATTATATCATA+TGG | + | chr5.4:57328198-57328217 | None:intergenic | 20.0% |
| !! | TAATCTGATACATACTTAAT+TGG | - | chr5.4:57330115-57330134 | MS.gene26158:intron | 20.0% |
| !! | TATAATATAATCAAGATACC+GGG | - | chr5.4:57330677-57330696 | MS.gene26158:intron | 20.0% |
| !! | TTAACTTATCAGTTATCATT+GGG | - | chr5.4:57330854-57330873 | MS.gene26158:intron | 20.0% |
| !! | TTCATTCATATTAATTTCCT+TGG | - | chr5.4:57327723-57327742 | MS.gene26158:intron | 20.0% |
| !! | TTGAATTATTGTATGATTTC+AGG | - | chr5.4:57330391-57330410 | MS.gene26158:intron | 20.0% |
| !! | TTGTTTATACTTCTATCTAA+TGG | - | chr5.4:57329592-57329611 | MS.gene26158:CDS | 20.0% |
| !!! | ACAGTTTCATTTTTTTTTTC+TGG | - | chr5.4:57327911-57327930 | MS.gene26158:CDS | 20.0% |
| !!! | ATATATTGGTTTCTTATTTG+CGG | - | chr5.4:57328722-57328741 | MS.gene26158:CDS | 20.0% |
| !!! | ATTCTATGTTTCGTTATTTT+TGG | - | chr5.4:57326836-57326855 | MS.gene26158:CDS | 20.0% |
| !!! | ATTTATTGGTTAAAGATTCA+AGG | - | chr5.4:57329457-57329476 | MS.gene26158:intron | 20.0% |
| !!! | TGAATAGATATTAGTTTTGA+GGG | + | chr5.4:57329817-57329836 | None:intergenic | 20.0% |
| !!! | TGTCTTTTATTAATTTTGGT+TGG | - | chr5.4:57329185-57329204 | MS.gene26158:intron | 20.0% |
| !!! | TTAAATTTCACACTTTTTAC+CGG | + | chr5.4:57327175-57327194 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTTGTAGTTC+CGG | - | chr5.4:57329063-57329082 | MS.gene26158:CDS | 20.0% |
| !!! | TTCTTATCATTGTTTTCTAA+TGG | - | chr5.4:57328246-57328265 | MS.gene26158:intron | 20.0% |
| !!! | TTGTTTCAGATATTTTTTTG+TGG | - | chr5.4:57326810-57326829 | MS.gene26158:CDS | 20.0% |
| ! | AAAATAACCATACAAAAGTG+AGG | + | chr5.4:57330279-57330298 | None:intergenic | 25.0% |
| ! | AAAATGCATATATGTTGACA+GGG | - | chr5.4:57330705-57330724 | MS.gene26158:intron | 25.0% |
| ! | AACAACGTGATTCTATAAAA+TGG | + | chr5.4:57326990-57327009 | None:intergenic | 25.0% |
| ! | AACATCAAGATATATTGCAA+AGG | + | chr5.4:57330092-57330111 | None:intergenic | 25.0% |
| ! | AATAGGAATTAATACAGCAA+AGG | + | chr5.4:57329422-57329441 | None:intergenic | 25.0% |
| ! | AATTACACAGTAATTACCTA+TGG | + | chr5.4:57330609-57330628 | None:intergenic | 25.0% |
| ! | ACATAAAAATAACCTTCAGT+TGG | + | chr5.4:57329042-57329061 | None:intergenic | 25.0% |
| ! | ATAATATAATCAAGATACCG+GGG | - | chr5.4:57330678-57330697 | MS.gene26158:intron | 25.0% |
| ! | ATTACACAGTAATTACCTAT+GGG | + | chr5.4:57330608-57330627 | None:intergenic | 25.0% |
| ! | ATTTGTATAGTCGAGTATTA+TGG | - | chr5.4:57330626-57330645 | MS.gene26158:intron | 25.0% |
| ! | CATATTTCAAGAAGTTTATG+AGG | - | chr5.4:57329481-57329500 | MS.gene26158:intron | 25.0% |
| ! | CCAAACATAAACTCAATATT+TGG | + | chr5.4:57327215-57327234 | None:intergenic | 25.0% |
| ! | CCAAATATTGAGTTTATGTT+TGG | - | chr5.4:57327212-57327231 | MS.gene26158:intron | 25.0% |
| ! | GTTAACTTATCAGTTATCAT+TGG | - | chr5.4:57330853-57330872 | MS.gene26158:intron | 25.0% |
| ! | TAAAATGCATATATGTTGAC+AGG | - | chr5.4:57330704-57330723 | MS.gene26158:intron | 25.0% |
| ! | TAACCTAAAAGATGATGAAT+TGG | - | chr5.4:57327690-57327709 | MS.gene26158:intron | 25.0% |
| ! | TAACTTATCAGTTATCATTG+GGG | - | chr5.4:57330855-57330874 | MS.gene26158:intron | 25.0% |
| ! | TAGAAAAATCTCTGATACAA+CGG | + | chr5.4:57330657-57330676 | None:intergenic | 25.0% |
| ! | TAGTAGAAAAACAAATGCTT+TGG | + | chr5.4:57330898-57330917 | None:intergenic | 25.0% |
| ! | TGATATACTTCCAGATAATA+CGG | + | chr5.4:57327845-57327864 | None:intergenic | 25.0% |
| ! | TTCAATAAATACCAGGAATA+AGG | + | chr5.4:57328806-57328825 | None:intergenic | 25.0% |
| ! | TTGTACTCAGCATTAAATAT+CGG | - | chr5.4:57328479-57328498 | MS.gene26158:CDS | 25.0% |
| !! | AATGAAGTATTTCAGAATCA+TGG | + | chr5.4:57327307-57327326 | None:intergenic | 25.0% |
| !! | ACAATCAGAAACATTTTGAA+TGG | - | chr5.4:57328588-57328607 | MS.gene26158:intron | 25.0% |
| !! | ACCAACAAAAAGTATGTTAA+AGG | + | chr5.4:57329904-57329923 | None:intergenic | 25.0% |
| !! | ACTAGTTAGTTTACATATTC+TGG | - | chr5.4:57328659-57328678 | MS.gene26158:CDS | 25.0% |
| !! | ATTCCAATTCATCATCTTTT+AGG | + | chr5.4:57327696-57327715 | None:intergenic | 25.0% |
| !! | GCGTTGTCTTTTATTAATTT+TGG | - | chr5.4:57329181-57329200 | MS.gene26158:intron | 25.0% |
| !! | GTTGAATTTATGAGTTTTTG+TGG | - | chr5.4:57327430-57327449 | MS.gene26158:intron | 25.0% |
| !! | TATTATCTGGAAGTATATCA+AGG | - | chr5.4:57327845-57327864 | MS.gene26158:intron | 25.0% |
| !! | TTCTTAAGAAATATGATGGA+AGG | - | chr5.4:57329353-57329372 | MS.gene26158:intron | 25.0% |
| !!! | ACATAGTGGATTTTTTCATT+AGG | + | chr5.4:57330246-57330265 | None:intergenic | 25.0% |
| !!! | ACTATTGACTTAGCAATTAA+AGG | - | chr5.4:57330183-57330202 | MS.gene26158:intron | 25.0% |
| !!! | ATATATGCATTTTAATTCCC+CGG | + | chr5.4:57330698-57330717 | None:intergenic | 25.0% |
| !!! | ATATGCAGAGTTTTTGTTTT+AGG | - | chr5.4:57328112-57328131 | MS.gene26158:CDS | 25.0% |
| !!! | CTATTGACTTAGCAATTAAA+GGG | - | chr5.4:57330184-57330203 | MS.gene26158:intron | 25.0% |
| !!! | CTTCTATCTAATGGATTTTT+AGG | - | chr5.4:57329601-57329620 | MS.gene26158:CDS | 25.0% |
| !!! | GTGAATAGATATTAGTTTTG+AGG | + | chr5.4:57329818-57329837 | None:intergenic | 25.0% |
| !!! | GTTTTGAATACCCAATTTAT+AGG | - | chr5.4:57327647-57327666 | MS.gene26158:intron | 25.0% |
| !!! | TAAATTTCACACTTTTTACC+GGG | + | chr5.4:57327174-57327193 | None:intergenic | 25.0% |
| !!! | TCCTTTAACATACTTTTTGT+TGG | - | chr5.4:57329900-57329919 | MS.gene26158:intron | 25.0% |
| !!! | TTTGGTATGCTTCTTTATTT+TGG | - | chr5.4:57328989-57329008 | MS.gene26158:intron | 25.0% |
| AAAGTCATAAACATAGACCA+AGG | + | chr5.4:57327743-57327762 | None:intergenic | 30.0% | |
| AACTGATAAGTTAACGTACT+TGG | + | chr5.4:57330848-57330867 | None:intergenic | 30.0% | |
| ACGTTTCATGAGTAAGAAAT+AGG | - | chr5.4:57328397-57328416 | MS.gene26158:intron | 30.0% | |
| ACTGAACAAAACTTTATCCA+AGG | + | chr5.4:57327120-57327139 | None:intergenic | 30.0% | |
| AGAAAAATCTCTGATACAAC+GGG | + | chr5.4:57330656-57330675 | None:intergenic | 30.0% | |
| AGAGGACTTTCAATAAATGT+GGG | + | chr5.4:57329940-57329959 | None:intergenic | 30.0% | |
| ATAACGATAAAAGCTACAAC+TGG | + | chr5.4:57327052-57327071 | None:intergenic | 30.0% | |
| ATATCTATTCACACTTGTTC+AGG | - | chr5.4:57329826-57329845 | MS.gene26158:intron | 30.0% | |
| ATCGATGAAATCAAAGATGA+AGG | + | chr5.4:57326677-57326696 | None:intergenic | 30.0% | |
| CGTTTCATGAGTAAGAAATA+GGG | - | chr5.4:57328398-57328417 | MS.gene26158:intron | 30.0% | |
| GAAGTTATAAACCTCCAAAT+CGG | + | chr5.4:57329107-57329126 | None:intergenic | 30.0% | |
| GATATACTTCCAGATAATAC+GGG | + | chr5.4:57327844-57327863 | None:intergenic | 30.0% | |
| GCTATATTATTCTTGCAACT+AGG | - | chr5.4:57330940-57330959 | MS.gene26158:intron | 30.0% | |
| GTTTCAGTGACCTATAAATT+GGG | + | chr5.4:57327660-57327679 | None:intergenic | 30.0% | |
| GTTTCATGAGTAAGAAATAG+GGG | - | chr5.4:57328399-57328418 | MS.gene26158:intron | 30.0% | |
| TAATTTATGTTGCCAACTGA+AGG | - | chr5.4:57329027-57329046 | MS.gene26158:CDS | 30.0% | |
| TAGAGGACTTTCAATAAATG+TGG | + | chr5.4:57329941-57329960 | None:intergenic | 30.0% | |
| TGTTTCAGTGACCTATAAAT+TGG | + | chr5.4:57327661-57327680 | None:intergenic | 30.0% | |
| TGTTTGACACATACAATGTA+TGG | - | chr5.4:57330357-57330376 | MS.gene26158:intron | 30.0% | |
| TTCATGAACAAGCAATACAT+AGG | + | chr5.4:57328429-57328448 | None:intergenic | 30.0% | |
| TTGAATATCTCAACATTTCC+AGG | - | chr5.4:57328869-57328888 | MS.gene26158:intron | 30.0% | |
| TTGAGATATGTCAGAATCAT+GGG | - | chr5.4:57327239-57327258 | MS.gene26158:intron | 30.0% | |
| ! | ACCTCTGCTTTGTAATTTTA+AGG | - | chr5.4:57327506-57327525 | MS.gene26158:intron | 30.0% |
| ! | ACTTGTAGCTAGTTTGTATT+GGG | - | chr5.4:57327402-57327421 | MS.gene26158:intron | 30.0% |
| ! | ATGTTTCTGATTGTTCCATT+TGG | + | chr5.4:57328582-57328601 | None:intergenic | 30.0% |
| ! | ATTTTTCCATGTCACACTAT+CGG | + | chr5.4:57330306-57330325 | None:intergenic | 30.0% |
| ! | CCTCTGCTTTGTAATTTTAA+GGG | - | chr5.4:57327507-57327526 | MS.gene26158:intron | 30.0% |
| ! | GTTTATGACTTTGTGCTTTT+GGG | - | chr5.4:57327751-57327770 | MS.gene26158:CDS | 30.0% |
| ! | TAGCTTTTGCAAAATCACAA+CGG | - | chr5.4:57327277-57327296 | MS.gene26158:intron | 30.0% |
| ! | TGTTTATGACTTTGTGCTTT+TGG | - | chr5.4:57327750-57327769 | MS.gene26158:intron | 30.0% |
| ! | TTATGAGTTTTTGTGGTTTG+TGG | - | chr5.4:57327437-57327456 | MS.gene26158:intron | 30.0% |
| ! | TTTGAGATATGTCAGAATCA+TGG | - | chr5.4:57327238-57327257 | MS.gene26158:intron | 30.0% |
| !! | ATGCTTTTGGTGATCAATAT+CGG | - | chr5.4:57328921-57328940 | MS.gene26158:intron | 30.0% |
| !! | CAGTTGCTTTAGAGAAAAAA+TGG | - | chr5.4:57329302-57329321 | MS.gene26158:intron | 30.0% |
| !! | GGGATGTTTTTGCAAATAAT+TGG | + | chr5.4:57328780-57328799 | None:intergenic | 30.0% |
| !! | GTTTATCAGTCACTTTCTTT+TGG | - | chr5.4:57329757-57329776 | MS.gene26158:intron | 30.0% |
| !!! | GTTTTTTTTTACTGCATTGC+AGG | - | chr5.4:57327807-57327826 | MS.gene26158:intron | 30.0% |
| !!! | TGTTTTAGTTACACTTTTCC+CGG | - | chr5.4:57327153-57327172 | MS.gene26158:intron | 30.0% |
| !!! | TTTTTGGTGCTAAGATAAAG+TGG | + | chr5.4:57329328-57329347 | None:intergenic | 30.0% |
| AAAACAAAGATCTCTGCGTA+GGG | - | chr5.4:57331023-57331042 | MS.gene26158:CDS | 35.0% | |
| AAAACTTCAGTGCTTACATG+TGG | + | chr5.4:57327376-57327395 | None:intergenic | 35.0% | |
| AAGAATAAGTGCCAAATCCT+TGG | + | chr5.4:57330818-57330837 | None:intergenic | 35.0% | |
| AGAATACTAAATATGCCTCG+AGG | + | chr5.4:57330141-57330160 | None:intergenic | 35.0% | |
| ATATCTCAACATTTCCAGGT+TGG | - | chr5.4:57328873-57328892 | MS.gene26158:intron | 35.0% | |
| ATCCAATTGAATCAAAGCAG+AGG | + | chr5.4:57326787-57326806 | None:intergenic | 35.0% | |
| ATGAAATGACCCGTATTATC+TGG | - | chr5.4:57327832-57327851 | MS.gene26158:intron | 35.0% | |
| ATTTCTTAGCTCAAGATAGG+TGG | - | chr5.4:57329782-57329801 | MS.gene26158:CDS | 35.0% | |
| CAAAGCCAATATGTATTGGA+AGG | - | chr5.4:57328897-57328916 | MS.gene26158:intron | 35.0% | |
| CCCTTAAAATTACAAAGCAG+AGG | + | chr5.4:57327510-57327529 | None:intergenic | 35.0% | |
| CGAGGCATATTTAGTATTCT+TGG | - | chr5.4:57330141-57330160 | MS.gene26158:intron | 35.0% | |
| GATAGTGTGACATGGAAAAA+TGG | - | chr5.4:57330305-57330324 | MS.gene26158:intron | 35.0% | |
| GATTTGGCACTTATTCTTCA+TGG | - | chr5.4:57330820-57330839 | MS.gene26158:intron | 35.0% | |
| GCAATTTCTTAGCTCAAGAT+AGG | - | chr5.4:57329779-57329798 | MS.gene26158:CDS | 35.0% | |
| TAAAACAAAGATCTCTGCGT+AGG | - | chr5.4:57331022-57331041 | MS.gene26158:CDS | 35.0% | |
| TAGGATTTAACTACGATACC+TGG | + | chr5.4:57328328-57328347 | None:intergenic | 35.0% | |
| TGAGATATGTCAGAATCATG+GGG | - | chr5.4:57327240-57327259 | MS.gene26158:intron | 35.0% | |
| TGGACAAAGCCAATATGTAT+TGG | - | chr5.4:57328893-57328912 | MS.gene26158:intron | 35.0% | |
| TGTTTGGTTAATAGAAGCCT+TGG | - | chr5.4:57327100-57327119 | MS.gene26158:CDS | 35.0% | |
| TTACATAAAATGTGGCAGTC+AGG | - | chr5.4:57327578-57327597 | MS.gene26158:intron | 35.0% | |
| TTATCTTGCTTCTGACATTG+TGG | - | chr5.4:57327785-57327804 | MS.gene26158:intron | 35.0% | |
| TTCCTCTGCTTTGATTCAAT+TGG | - | chr5.4:57326782-57326801 | MS.gene26158:intron | 35.0% | |
| TTGGAGGTTTATAACTTCAC+CGG | - | chr5.4:57329109-57329128 | MS.gene26158:intron | 35.0% | |
| TTTCAAGAAGTTTATGAGGC+AGG | - | chr5.4:57329485-57329504 | MS.gene26158:intron | 35.0% | |
| TTTGCGGTCTGAAAAATTTC+AGG | - | chr5.4:57328738-57328757 | MS.gene26158:intron | 35.0% | |
| ! | AATTGATTAGCTACCAACGA+TGG | + | chr5.4:57328686-57328705 | None:intergenic | 35.0% |
| ! | AGCTTTTGCAAAATCACAAC+GGG | - | chr5.4:57327278-57327297 | MS.gene26158:intron | 35.0% |
| ! | CACTTGTAGCTAGTTTGTAT+TGG | - | chr5.4:57327401-57327420 | MS.gene26158:intron | 35.0% |
| ! | CTGGAAGTATATCAAGGATA+AGG | - | chr5.4:57327851-57327870 | MS.gene26158:intron | 35.0% |
| ! | TACTCCTTTTCCTTGATGAA+CGG | - | chr5.4:57328840-57328859 | MS.gene26158:CDS | 35.0% |
| !! | ATTCACACTTGTTCAGGTTT+TGG | - | chr5.4:57329832-57329851 | MS.gene26158:intron | 35.0% |
| !! | TGCTTTTGGTGATCAATATC+GGG | - | chr5.4:57328922-57328941 | MS.gene26158:intron | 35.0% |
| !!! | TGTTCAGGTTTTGGATCATT+GGG | - | chr5.4:57329841-57329860 | MS.gene26158:intron | 35.0% |
| !!! | TTGTTCAGGTTTTGGATCAT+TGG | - | chr5.4:57329840-57329859 | MS.gene26158:intron | 35.0% |
| !!! | TTTGTTTTTGTAGTTCCGGA+AGG | - | chr5.4:57329067-57329086 | MS.gene26158:CDS | 35.0% |
| AAATACCAGGAATAAGGCGA+GGG | + | chr5.4:57328800-57328819 | None:intergenic | 40.0% | |
| AAATCAAAGTATGAGGCTGC+TGG | - | chr5.4:57329512-57329531 | MS.gene26158:intron | 40.0% | |
| AAATGCTTTGGCCATTGTTG+TGG | + | chr5.4:57330886-57330905 | None:intergenic | 40.0% | |
| AACAGCCATACATTGCATCA+GGG | + | chr5.4:57330421-57330440 | None:intergenic | 40.0% | |
| AATGGTGGCTTCTCATTGAT+TGG | - | chr5.4:57330323-57330342 | MS.gene26158:intron | 40.0% | |
| ACAGCAACTGAGAGATATAG+AGG | + | chr5.4:57329958-57329977 | None:intergenic | 40.0% | |
| ACTAACACAAGTCTGCATGA+AGG | + | chr5.4:57328371-57328390 | None:intergenic | 40.0% | |
| AGAGTGAAGGAGGTTATGTA+TGG | - | chr5.4:57329667-57329686 | MS.gene26158:intron | 40.0% | |
| AGGCTGGAAATCAAAGTATG+AGG | - | chr5.4:57329505-57329524 | MS.gene26158:intron | 40.0% | |
| AGTGTGACATGGAAAAATGG+TGG | - | chr5.4:57330308-57330327 | MS.gene26158:intron | 40.0% | |
| ATATGTTGACAGGGCAAAAC+TGG | - | chr5.4:57330714-57330733 | MS.gene26158:intron | 40.0% | |
| ATCTCCGTTCATCAAGGAAA+AGG | + | chr5.4:57328847-57328866 | None:intergenic | 40.0% | |
| CAGAGTGATTTCTTAGCTCA+AGG | - | chr5.4:57329717-57329736 | MS.gene26158:intron | 40.0% | |
| CATTTCAGGGTTCACCAAAA+GGG | - | chr5.4:57330526-57330545 | MS.gene26158:intron | 40.0% | |
| CTCAGCATTAAATATCGGCA+TGG | - | chr5.4:57328484-57328503 | MS.gene26158:CDS | 40.0% | |
| CTTCTATGGTCTTTCCATCA+GGG | + | chr5.4:57330477-57330496 | None:intergenic | 40.0% | |
| CTTGAGCTAAGAAATCACTC+TGG | + | chr5.4:57329719-57329738 | None:intergenic | 40.0% | |
| GACATCAAGTACTTTGACCT+AGG | - | chr5.4:57328009-57328028 | MS.gene26158:intron | 40.0% | |
| GAGTGAAGGAGGTTATGTAT+GGG | - | chr5.4:57329668-57329687 | MS.gene26158:intron | 40.0% | |
| GCATGCCTTCCAATACATAT+TGG | + | chr5.4:57328905-57328924 | None:intergenic | 40.0% | |
| GGAATGATAGATCAGATCGA+AGG | + | chr5.4:57326656-57326675 | None:intergenic | 40.0% | |
| GGATTTCACTGAAAAGCTAG+AGG | - | chr5.4:57330756-57330775 | MS.gene26158:intron | 40.0% | |
| GTATTGGAGTTGTAGAGTCT+GGG | - | chr5.4:57330785-57330804 | MS.gene26158:intron | 40.0% | |
| GTTATAAACCTCCAAATCGG+TGG | + | chr5.4:57329104-57329123 | None:intergenic | 40.0% | |
| GTTTATAACTTCACCGGTGA+AGG | - | chr5.4:57329115-57329134 | MS.gene26158:intron | 40.0% | |
| TAAATACCAGGAATAAGGCG+AGG | + | chr5.4:57328801-57328820 | None:intergenic | 40.0% | |
| TAACAGCCATACATTGCATC+AGG | + | chr5.4:57330422-57330441 | None:intergenic | 40.0% | |
| TACATATTCTGGTCCATCGT+TGG | - | chr5.4:57328670-57328689 | MS.gene26158:CDS | 40.0% | |
| TCAAACATCTCCGTTCATCA+AGG | + | chr5.4:57328853-57328872 | None:intergenic | 40.0% | |
| TCATCAGTCTCATCACGATA+AGG | + | chr5.4:57328039-57328058 | None:intergenic | 40.0% | |
| TCATTTCAGGGTTCACCAAA+AGG | - | chr5.4:57330525-57330544 | MS.gene26158:intron | 40.0% | |
| TGGGCATGCAAAAACTATGA+TGG | - | chr5.4:57329687-57329706 | MS.gene26158:intron | 40.0% | |
| TGTATTGGAGTTGTAGAGTC+TGG | - | chr5.4:57330784-57330803 | MS.gene26158:intron | 40.0% | |
| TTGAAACCGATAGTGTGACA+TGG | - | chr5.4:57330297-57330316 | MS.gene26158:intron | 40.0% | |
| TTTGGTGAACCCTGAAATGA+CGG | + | chr5.4:57330525-57330544 | None:intergenic | 40.0% | |
| ! | GGAGCATTATTTGAACACAG+AGG | - | chr5.4:57330971-57330990 | MS.gene26158:intron | 40.0% |
| ! | GGGTTTGATGACTTCTGTAT+TGG | - | chr5.4:57329861-57329880 | MS.gene26158:intron | 40.0% |
| ! | GTCTATTCGTTCTTTTGCTG+AGG | - | chr5.4:57329270-57329289 | MS.gene26158:intron | 40.0% |
| ! | TACATACTTAATTGGCCTCG+AGG | - | chr5.4:57330123-57330142 | MS.gene26158:intron | 40.0% |
| !! | ATAGCTCATTTTTCCCTTCG+TGG | - | chr5.4:57327981-57328000 | MS.gene26158:CDS | 40.0% |
| !! | GATTGGCGACTTTGATTTTC+TGG | + | chr5.4:57326601-57326620 | None:intergenic | 40.0% |
| !! | TGCAACACCTCACTTTTGTA+TGG | - | chr5.4:57330269-57330288 | MS.gene26158:intron | 40.0% |
| !! | TGTATTGGAAGGCATGCTTT+TGG | - | chr5.4:57328908-57328927 | MS.gene26158:intron | 40.0% |
| !!! | GGATTTTTAGGTATGAGCAC+CGG | - | chr5.4:57329613-57329632 | MS.gene26158:CDS | 40.0% |
| AAAACCAGCTTCAGCTTTCC+TGG | + | chr5.4:57328971-57328990 | None:intergenic | 45.0% | |
| AACCTCGTCAGTGTTGTACA+TGG | + | chr5.4:57329155-57329174 | None:intergenic | 45.0% | |
| AAGAAGTTTATGAGGCAGGC+TGG | - | chr5.4:57329489-57329508 | MS.gene26158:intron | 45.0% | |
| AAGCTAGAGGCAGCTTGTAT+TGG | - | chr5.4:57330769-57330788 | MS.gene26158:intron | 45.0% | |
| AAGTGTGCAACTATCACTCC+AGG | - | chr5.4:57328307-57328326 | MS.gene26158:CDS | 45.0% | |
| AATCCCATCGTTGAGATGGA+CGG | - | chr5.4:57326617-57326636 | MS.gene26158:CDS | 45.0% | |
| AGAGGAATTCATCGATGCTG+TGG | - | chr5.4:57330989-57331008 | MS.gene26158:intron | 45.0% | |
| AGTATGAGGCTGCTGGTATA+TGG | - | chr5.4:57329519-57329538 | MS.gene26158:intron | 45.0% | |
| AGTATGTGGAGGAGTCCAAA+TGG | - | chr5.4:57328564-57328583 | MS.gene26158:intron | 45.0% | |
| AGTCAATAGTACCAACCAGC+AGG | + | chr5.4:57330173-57330192 | None:intergenic | 45.0% | |
| ATGTACAACACTGACGAGGT+TGG | - | chr5.4:57329154-57329173 | MS.gene26158:intron | 45.0% | |
| CAGTCTCATCACGATAAGGA+AGG | + | chr5.4:57328035-57328054 | None:intergenic | 45.0% | |
| CCACCATATCATCAATGAGC+CGG | + | chr5.4:57329635-57329654 | None:intergenic | 45.0% | |
| GACAGTTACCCGTCATTTCA+GGG | - | chr5.4:57330513-57330532 | MS.gene26158:intron | 45.0% | |
| GCATATGCACTCAAGAGTGA+AGG | - | chr5.4:57329654-57329673 | MS.gene26158:intron | 45.0% | |
| GCTTCTATGGTCTTTCCATC+AGG | + | chr5.4:57330478-57330497 | None:intergenic | 45.0% | |
| GGATGACAATGCTACACTCT+TGG | - | chr5.4:57330735-57330754 | MS.gene26158:intron | 45.0% | |
| GGTTTGTGGTCGTAATTCAG+AGG | - | chr5.4:57327451-57327470 | MS.gene26158:intron | 45.0% | |
| GTAGACTGTAGTGCTTCGTT+AGG | - | chr5.4:57329976-57329995 | MS.gene26158:intron | 45.0% | |
| GTTTGCCCTGATGCAATGTA+TGG | - | chr5.4:57330413-57330432 | MS.gene26158:intron | 45.0% | |
| TAACCGTCCATCTCAACGAT+GGG | + | chr5.4:57326623-57326642 | None:intergenic | 45.0% | |
| TATAACTTCACCGGTGAAGG+AGG | - | chr5.4:57329118-57329137 | MS.gene26158:intron | 45.0% | |
| TATGCACTCAAGAGTGAAGG+AGG | - | chr5.4:57329657-57329676 | MS.gene26158:intron | 45.0% | |
| TCTTGCAACTAGGCTGTCTA+GGG | - | chr5.4:57330950-57330969 | MS.gene26158:intron | 45.0% | |
| TGGGAAGATGACCAAGGATT+TGG | - | chr5.4:57330804-57330823 | MS.gene26158:intron | 45.0% | |
| TTCTTGCAACTAGGCTGTCT+AGG | - | chr5.4:57330949-57330968 | MS.gene26158:intron | 45.0% | |
| TTGATGTCCAACTCCACGAA+GGG | + | chr5.4:57327997-57328016 | None:intergenic | 45.0% | |
| TTGCACTTGCACTGCTATGT+AGG | - | chr5.4:57328269-57328288 | MS.gene26158:CDS | 45.0% | |
| TTGGTGAACCCTGAAATGAC+GGG | + | chr5.4:57330524-57330543 | None:intergenic | 45.0% | |
| ! | AGTTTGGCCTGAAGAGTATG+TGG | - | chr5.4:57328550-57328569 | MS.gene26158:intron | 45.0% |
| ! | CATTTTTCCCTTCGTGGAGT+TGG | - | chr5.4:57327987-57328006 | MS.gene26158:CDS | 45.0% |
| ! | GGATGCTATGCTATTTGTGC+TGG | + | chr5.4:57330560-57330579 | None:intergenic | 45.0% |
| ! | GTGCTGATCAAATTGCTGCA+TGG | - | chr5.4:57328451-57328470 | MS.gene26158:intron | 45.0% |
| ! | TTGGGGCATTACCACAACAA+TGG | - | chr5.4:57330872-57330891 | MS.gene26158:intron | 45.0% |
| !! | CATATTGGCTTTGTCCAACC+TGG | + | chr5.4:57328890-57328909 | None:intergenic | 45.0% |
| !! | CCACTGACTCGGTGATTAAA+GGG | - | chr5.4:57328945-57328964 | MS.gene26158:intron | 45.0% |
| !! | TATTCTTGGTGTCTTCCTGC+TGG | - | chr5.4:57330155-57330174 | MS.gene26158:intron | 45.0% |
| !! | TGATTTCAGGTTTGCCCTGA+TGG | - | chr5.4:57330404-57330423 | MS.gene26158:intron | 45.0% |
| !! | TTCTTTTGCTGAGGCGTCTA+TGG | - | chr5.4:57329279-57329298 | MS.gene26158:intron | 45.0% |
| !!! | GGAAAGCTGAAGCTGGTTTT+TGG | - | chr5.4:57328971-57328990 | MS.gene26158:intron | 45.0% |
| AGAGTCTGGGAAGATGACCA+AGG | - | chr5.4:57330798-57330817 | MS.gene26158:intron | 50.0% | |
| ATAGAAGCAGAAGCAGCCCA+TGG | - | chr5.4:57330490-57330509 | MS.gene26158:intron | 50.0% | |
| CAATGCAACACCTCCTTCAC+CGG | + | chr5.4:57329131-57329150 | None:intergenic | 50.0% | |
| CATCACGATAAGGAAGGCCT+AGG | + | chr5.4:57328029-57328048 | None:intergenic | 50.0% | |
| CCCTTTAATCACCGAGTCAG+TGG | + | chr5.4:57328948-57328967 | None:intergenic | 50.0% | |
| CTAACCGTCCATCTCAACGA+TGG | + | chr5.4:57326624-57326643 | None:intergenic | 50.0% | |
| CTTGATGTCCAACTCCACGA+AGG | + | chr5.4:57327998-57328017 | None:intergenic | 50.0% | |
| GAAGCTCGTGTCAAGGAGTT+TGG | - | chr5.4:57328534-57328553 | MS.gene26158:CDS | 50.0% | |
| GACAGATGAAGCTCGTGTCA+AGG | - | chr5.4:57328527-57328546 | MS.gene26158:CDS | 50.0% | |
| GACTCCTCCACATACTCTTC+AGG | + | chr5.4:57328560-57328579 | None:intergenic | 50.0% | |
| GGACAGTTACCCGTCATTTC+AGG | - | chr5.4:57330512-57330531 | MS.gene26158:intron | 50.0% | |
| GTCCATCTCAACGATGGGAT+TGG | + | chr5.4:57326618-57326637 | None:intergenic | 50.0% | |
| TAGAAGCAGAAGCAGCCCAT+GGG | - | chr5.4:57330491-57330510 | MS.gene26158:intron | 50.0% | |
| TTCAGGGTTCACCAAAAGGG+TGG | - | chr5.4:57330529-57330548 | MS.gene26158:intron | 50.0% | |
| TTTGTAGTTCCGGAAGGCCA+GGG | - | chr5.4:57329073-57329092 | MS.gene26158:CDS | 50.0% | |
| ! | AACATCCCTCGCCTTATTCC+TGG | - | chr5.4:57328792-57328811 | MS.gene26158:intron | 50.0% |
| ! | ATGGGCTGCTTCTGCTTCTA+TGG | + | chr5.4:57330491-57330510 | None:intergenic | 50.0% |
| ! | CCGGCTCATTGATGATATGG+TGG | - | chr5.4:57329632-57329651 | MS.gene26158:intron | 50.0% |
| ! | TCAATATCGGGCCACTGACT+CGG | - | chr5.4:57328934-57328953 | MS.gene26158:intron | 50.0% |
| ! | TTGGCCTGAAGAGTATGTGG+AGG | - | chr5.4:57328553-57328572 | MS.gene26158:intron | 50.0% |
| ! | TTTTGTAGTTCCGGAAGGCC+AGG | - | chr5.4:57329072-57329091 | MS.gene26158:CDS | 50.0% |
| !! | AATGACGGGTAACTGTCCCA+TGG | + | chr5.4:57330510-57330529 | None:intergenic | 50.0% |
| !! | ATGACGGGTAACTGTCCCAT+GGG | + | chr5.4:57330509-57330528 | None:intergenic | 50.0% |
| !! | GAGGTGTTGCAGCAACATAG+TGG | + | chr5.4:57330260-57330279 | None:intergenic | 50.0% |
| !! | GCACCGGCTCATTGATGATA+TGG | - | chr5.4:57329629-57329648 | MS.gene26158:CDS | 50.0% |
| !! | GCCACTGACTCGGTGATTAA+AGG | - | chr5.4:57328944-57328963 | MS.gene26158:intron | 50.0% |
| !!! | TGCTGGTTTCTCCACCCTTT+TGG | + | chr5.4:57330543-57330562 | None:intergenic | 50.0% |
| CGCCAATCCCATCGTTGAGA+TGG | - | chr5.4:57326613-57326632 | MS.gene26158:CDS | 55.0% | |
| GGACAAGAGGTCTAGCCCAT+AGG | - | chr5.4:57330590-57330609 | MS.gene26158:intron | 55.0% | |
| GGCCATGTACAACACTGACG+AGG | - | chr5.4:57329150-57329169 | MS.gene26158:intron | 55.0% | |
| !! | CGGTGAAGGAGGTGTTGCAT+TGG | - | chr5.4:57329129-57329148 | MS.gene26158:intron | 55.0% |
| !! | CTTGGTGTCTTCCTGCTGGT+TGG | - | chr5.4:57330159-57330178 | MS.gene26158:intron | 55.0% |
| !! | GACTCGGTGATTAAAGGGCC+AGG | - | chr5.4:57328950-57328969 | MS.gene26158:intron | 55.0% |
| AGGGCCAGGAAAGCTGAAGC+TGG | - | chr5.4:57328964-57328983 | MS.gene26158:intron | 60.0% | |
| ATCATGGGGACTCGCTGCGA+TGG | - | chr5.4:57327254-57327273 | MS.gene26158:intron | 60.0% | |
| CCAAATCGGTGGTCTCACCC+TGG | + | chr5.4:57329093-57329112 | None:intergenic | 60.0% | |
| ! | CCAGGGTGAGACCACCGATT+TGG | - | chr5.4:57329090-57329109 | MS.gene26158:intron | 60.0% |
| !! | GGGTGAGACCACCGATTTGG+AGG | - | chr5.4:57329093-57329112 | MS.gene26158:intron | 60.0% |
| ! | GTGGTCTCACCCTGGCCTTC+CGG | + | chr5.4:57329085-57329104 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 57326590 | 57331043 | 57326590 | ID=MS.gene26158 |
| chr5.4 | mRNA | 57326590 | 57331043 | 57326590 | ID=MS.gene26158.t1;Parent=MS.gene26158 |
| chr5.4 | exon | 57330995 | 57331043 | 57330995 | ID=MS.gene26158.t1.exon1;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57330995 | 57331043 | 57330995 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57329761 | 57329804 | 57329761 | ID=MS.gene26158.t1.exon2;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57329761 | 57329804 | 57329761 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57329539 | 57329648 | 57329539 | ID=MS.gene26158.t1.exon3;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57329539 | 57329648 | 57329539 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57329305 | 57329342 | 57329305 | ID=MS.gene26158.t1.exon4;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57329305 | 57329342 | 57329305 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57329024 | 57329101 | 57329024 | ID=MS.gene26158.t1.exon5;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57329024 | 57329101 | 57329024 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57328820 | 57328873 | 57328820 | ID=MS.gene26158.t1.exon6;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57328820 | 57328873 | 57328820 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57328641 | 57328742 | 57328641 | ID=MS.gene26158.t1.exon7;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57328641 | 57328742 | 57328641 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57328462 | 57328553 | 57328462 | ID=MS.gene26158.t1.exon8;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57328462 | 57328553 | 57328462 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57328259 | 57328362 | 57328259 | ID=MS.gene26158.t1.exon9;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57328259 | 57328362 | 57328259 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57328093 | 57328161 | 57328093 | ID=MS.gene26158.t1.exon10;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57328093 | 57328161 | 57328093 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57327895 | 57328010 | 57327895 | ID=MS.gene26158.t1.exon11;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57327895 | 57328010 | 57327895 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57327751 | 57327785 | 57327751 | ID=MS.gene26158.t1.exon12;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57327751 | 57327785 | 57327751 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57327022 | 57327164 | 57327022 | ID=MS.gene26158.t1.exon13;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57327022 | 57327164 | 57327022 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57326785 | 57326907 | 57326785 | ID=MS.gene26158.t1.exon14;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57326785 | 57326907 | 57326785 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| chr5.4 | exon | 57326590 | 57326671 | 57326590 | ID=MS.gene26158.t1.exon15;Parent=MS.gene26158.t1 |
| chr5.4 | CDS | 57326590 | 57326671 | 57326590 | ID=cds.MS.gene26158.t1;Parent=MS.gene26158.t1 |
| Gene Sequence |
| Protein sequence |
