Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26175.t1 | XP_003616166.2 | 97.2 | 843 | 24 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1671.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26175.t1 | Q9FX32 | 72.3 | 806 | 223 | 0 | 7 | 812 | 9 | 814 | 0.0e+00 | 1233.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26175.t1 | G7KFT7 | 97.2 | 843 | 24 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1671.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85350 | MS.gene26175 | PPI |
| MS.gene22944 | MS.gene26175 | PPI |
| MS.gene07013 | MS.gene26175 | PPI |
| MS.gene030241 | MS.gene26175 | PPI |
| MS.gene012174 | MS.gene26175 | PPI |
| MS.gene025337 | MS.gene26175 | PPI |
| MS.gene26175 | MS.gene07237 | PPI |
| MS.gene26175 | MS.gene005566 | PPI |
| MS.gene26175 | MS.gene28775 | PPI |
| MS.gene062124 | MS.gene26175 | PPI |
| MS.gene26705 | MS.gene26175 | PPI |
| MS.gene26175 | MS.gene20759 | PPI |
| MS.gene26175 | MS.gene070146 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26175.t1 | MTR_5g076830 | 97.153 | 843 | 24 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1715 |
| MS.gene26175.t1 | MTR_3g064610 | 81.851 | 832 | 146 | 2 | 1 | 827 | 1 | 832 | 0.0 | 1439 |
| MS.gene26175.t1 | MTR_6g478000 | 64.792 | 818 | 216 | 3 | 13 | 828 | 15 | 762 | 0.0 | 1097 |
| MS.gene26175.t1 | MTR_6g478030 | 75.439 | 627 | 154 | 0 | 130 | 756 | 894 | 1520 | 0.0 | 998 |
| MS.gene26175.t1 | MTR_7g108930 | 55.791 | 803 | 351 | 2 | 9 | 811 | 9 | 807 | 0.0 | 952 |
| MS.gene26175.t1 | MTR_1g088170 | 56.554 | 801 | 347 | 1 | 1 | 801 | 1 | 800 | 0.0 | 947 |
| MS.gene26175.t1 | MTR_2g044070 | 54.771 | 807 | 359 | 4 | 6 | 811 | 3 | 804 | 0.0 | 937 |
| MS.gene26175.t1 | MTR_4g124660 | 54.783 | 805 | 358 | 4 | 4 | 807 | 3 | 802 | 0.0 | 929 |
| MS.gene26175.t1 | MTR_4g124660 | 56.117 | 752 | 324 | 4 | 4 | 754 | 3 | 749 | 0.0 | 882 |
| MS.gene26175.t1 | MTR_6g478020 | 72.500 | 200 | 53 | 1 | 636 | 833 | 1 | 200 | 2.25e-96 | 328 |
| MS.gene26175.t1 | MTR_0277s0020 | 59.896 | 192 | 43 | 2 | 644 | 833 | 1159 | 1318 | 2.62e-65 | 238 |
| MS.gene26175.t1 | MTR_0419s0050 | 54.088 | 159 | 13 | 2 | 580 | 738 | 1 | 99 | 3.33e-45 | 157 |
| MS.gene26175.t1 | MTR_4g115620 | 26.111 | 540 | 321 | 20 | 283 | 776 | 168 | 675 | 2.04e-35 | 145 |
| MS.gene26175.t1 | MTR_5g091340 | 25.676 | 518 | 319 | 18 | 283 | 758 | 171 | 664 | 1.48e-34 | 142 |
| MS.gene26175.t1 | MTR_3g047380 | 25.388 | 516 | 320 | 18 | 283 | 758 | 167 | 657 | 2.34e-32 | 135 |
| MS.gene26175.t1 | MTR_0277s0030 | 72.059 | 68 | 19 | 0 | 580 | 647 | 1 | 68 | 9.94e-25 | 103 |
| MS.gene26175.t1 | MTR_0277s0030 | 48.148 | 81 | 40 | 1 | 755 | 833 | 65 | 145 | 6.24e-20 | 89.7 |
| MS.gene26175.t1 | MTR_0419s0010 | 47.115 | 104 | 20 | 1 | 699 | 802 | 2 | 70 | 2.24e-24 | 97.4 |
| MS.gene26175.t1 | MTR_4g021160 | 52.239 | 67 | 31 | 1 | 7 | 72 | 10 | 76 | 5.69e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26175.t1 | AT1G73370 | 72.333 | 806 | 223 | 0 | 7 | 812 | 9 | 814 | 0.0 | 1266 |
| MS.gene26175.t1 | AT1G73370 | 72.333 | 806 | 223 | 0 | 7 | 812 | 9 | 814 | 0.0 | 1266 |
| MS.gene26175.t1 | AT5G37180 | 70.694 | 836 | 240 | 2 | 10 | 843 | 5 | 837 | 0.0 | 1241 |
| MS.gene26175.t1 | AT1G73370 | 73.117 | 770 | 207 | 0 | 43 | 812 | 1 | 770 | 0.0 | 1213 |
| MS.gene26175.t1 | AT5G37180 | 74.884 | 649 | 161 | 1 | 197 | 843 | 1 | 649 | 0.0 | 1030 |
| MS.gene26175.t1 | AT4G02280 | 56.398 | 805 | 350 | 1 | 7 | 811 | 6 | 809 | 0.0 | 972 |
| MS.gene26175.t1 | AT5G37180 | 75.465 | 591 | 143 | 1 | 255 | 843 | 1 | 591 | 0.0 | 944 |
| MS.gene26175.t1 | AT5G49190 | 54.388 | 809 | 356 | 3 | 9 | 811 | 5 | 806 | 0.0 | 934 |
| MS.gene26175.t1 | AT5G49190 | 55.471 | 786 | 337 | 3 | 32 | 811 | 18 | 796 | 0.0 | 927 |
| MS.gene26175.t1 | AT5G20830 | 55.266 | 807 | 353 | 5 | 7 | 811 | 8 | 808 | 0.0 | 923 |
| MS.gene26175.t1 | AT5G20830 | 55.266 | 807 | 353 | 5 | 7 | 811 | 8 | 808 | 0.0 | 923 |
| MS.gene26175.t1 | AT5G20830 | 55.266 | 807 | 353 | 5 | 7 | 811 | 8 | 808 | 0.0 | 923 |
| MS.gene26175.t1 | AT5G49190 | 57.510 | 739 | 313 | 1 | 73 | 811 | 3 | 740 | 0.0 | 916 |
| MS.gene26175.t1 | AT3G43190 | 54.703 | 808 | 358 | 5 | 6 | 811 | 7 | 808 | 0.0 | 912 |
| MS.gene26175.t1 | AT3G43190 | 54.703 | 808 | 358 | 5 | 6 | 811 | 7 | 808 | 0.0 | 912 |
| MS.gene26175.t1 | AT5G11110 | 26.568 | 542 | 320 | 22 | 283 | 781 | 177 | 683 | 1.23e-34 | 143 |
| MS.gene26175.t1 | AT5G20280 | 25.326 | 537 | 328 | 19 | 283 | 776 | 170 | 676 | 1.01e-33 | 140 |
| MS.gene26175.t1 | AT4G10120 | 24.951 | 513 | 320 | 17 | 283 | 758 | 23 | 507 | 2.22e-33 | 139 |
| MS.gene26175.t1 | AT4G10120 | 25.194 | 516 | 315 | 18 | 283 | 758 | 197 | 681 | 3.91e-33 | 138 |
| MS.gene26175.t1 | AT4G10120 | 25.194 | 516 | 315 | 18 | 283 | 758 | 197 | 681 | 3.91e-33 | 138 |
| MS.gene26175.t1 | AT4G10120 | 25.194 | 516 | 315 | 18 | 283 | 758 | 197 | 681 | 3.91e-33 | 138 |
| MS.gene26175.t1 | AT4G10120 | 24.593 | 492 | 308 | 15 | 302 | 758 | 17 | 480 | 4.22e-32 | 134 |
| MS.gene26175.t1 | AT1G04920 | 25.319 | 549 | 338 | 22 | 258 | 758 | 138 | 662 | 5.55e-32 | 134 |
Find 185 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAGTTCATGGTTATTT+TGG | 0.070641 | 5.4:-57524051 | MS.gene26175:CDS |
| TGCAAACAAGTTGGTAAATA+TGG | 0.130999 | 5.4:-57521230 | MS.gene26175:CDS |
| TAATTTCTTATTCAAGAATT+TGG | 0.152548 | 5.4:-57521131 | MS.gene26175:intron |
| GGGCTATGTAGGGTTGTTTC+AGG | 0.160248 | 5.4:-57522578 | MS.gene26175:CDS |
| CTTGCCATTGAGAAGATTAT+TGG | 0.177357 | 5.4:+57521954 | None:intergenic |
| GAAGAAGACAAGGTTAATTT+AGG | 0.178184 | 5.4:+57524797 | None:intergenic |
| GGATGCAGCAACCAAGATTT+TGG | 0.185147 | 5.4:-57523129 | MS.gene26175:CDS |
| ATTCCTTTCTCTGTATTAAA+AGG | 0.218868 | 5.4:+57523399 | None:intergenic |
| GACTTTGGAGCATTTGATAT+TGG | 0.226670 | 5.4:-57524824 | MS.gene26175:CDS |
| TGACATGAGAAGTGATATTT+AGG | 0.235805 | 5.4:+57522832 | None:intergenic |
| CAAACCTTCCAGCAATTTCT+TGG | 0.238963 | 5.4:+57522752 | None:intergenic |
| TTCAAGGACAACTGGAAAAT+TGG | 0.245819 | 5.4:-57524735 | MS.gene26175:CDS |
| GGTTATTACTTGGAGCTTAA+TGG | 0.249918 | 5.4:-57520290 | None:intergenic |
| GGGAAGCCAGATCTTGTTAT+TGG | 0.282391 | 5.4:-57523095 | MS.gene26175:CDS |
| TGGGGAACACTTACACCTTT+TGG | 0.282985 | 5.4:-57521210 | MS.gene26175:CDS |
| ATCACTACTTTGAAAATTGT+TGG | 0.288854 | 5.4:+57524075 | None:intergenic |
| AAATTTGGTAGCATCATTAA+TGG | 0.291041 | 5.4:-57523057 | MS.gene26175:CDS |
| GGTTGCTTGCCAACTGGTTT+TGG | 0.291946 | 5.4:+57520965 | None:intergenic |
| CATATGTAGCCTTTGCAATT+AGG | 0.298129 | 5.4:-57525425 | MS.gene26175:CDS |
| CATTTCCAGGTTGAAGGATT+GGG | 0.305291 | 5.4:-57524214 | MS.gene26175:intron |
| CATGAAACTTCATGAATTAA+TGG | 0.308219 | 5.4:-57525788 | MS.gene26175:CDS |
| CATGCTGCATTTACTCTTCC+AGG | 0.309459 | 5.4:-57522599 | MS.gene26175:CDS |
| CTTCCTTTCAGGTTATTACT+TGG | 0.312619 | 5.4:-57520300 | MS.gene26175:intron |
| ACTTTGGAGCATTTGATATT+GGG | 0.313644 | 5.4:-57524823 | MS.gene26175:CDS |
| AAATTACACAGATGGAAATT+TGG | 0.316028 | 5.4:-57523072 | MS.gene26175:CDS |
| TTAACCTTGTCTTCTTCAAT+TGG | 0.317572 | 5.4:-57524791 | MS.gene26175:CDS |
| TTGTCTTCTTCAATTGGAAA+TGG | 0.326217 | 5.4:-57524785 | MS.gene26175:CDS |
| CCTGCTTTGTATGAAGCATT+TGG | 0.338153 | 5.4:-57521657 | MS.gene26175:CDS |
| TTTGGGCAAGCAGATGTTCT+TGG | 0.338987 | 5.4:-57524033 | MS.gene26175:CDS |
| ATACCCTTTCCTTGAATTTG+AGG | 0.348077 | 5.4:+57525325 | None:intergenic |
| AAATGAAAGAAATTATGTTT+TGG | 0.349393 | 5.4:-57525737 | MS.gene26175:CDS |
| GTAGTGATCTTCTCAGTTCA+TGG | 0.349932 | 5.4:-57524060 | MS.gene26175:CDS |
| TTCCATTAGGTCCAAAATCT+TGG | 0.351148 | 5.4:+57523118 | None:intergenic |
| TTTCAAAGTTCTTAACTTCA+AGG | 0.358243 | 5.4:-57524751 | MS.gene26175:CDS |
| ACAACAGGTAGTTTACATAT+TGG | 0.359818 | 5.4:-57523680 | MS.gene26175:intron |
| TTCTTAACTTCAAGGACAAC+TGG | 0.367621 | 5.4:-57524743 | MS.gene26175:CDS |
| TACTCCCAGACTCCTGGATT+TGG | 0.368840 | 5.4:+57525402 | None:intergenic |
| GCAAAGTAGACCCATCATAT+TGG | 0.374838 | 5.4:-57521476 | MS.gene26175:CDS |
| ATCAAAAGATAGAGAGGAAA+TGG | 0.388957 | 5.4:-57521820 | MS.gene26175:CDS |
| TAAAGAATTTGTCCGCTTCA+AGG | 0.389301 | 5.4:+57525897 | None:intergenic |
| GGAGGTTCATCACTTGGAAT+AGG | 0.389616 | 5.4:+57520986 | None:intergenic |
| ATAAGAAATTATAGAACATA+TGG | 0.396630 | 5.4:+57521143 | None:intergenic |
| GCAAACAAGTTGGTAAATAT+GGG | 0.397058 | 5.4:-57521229 | MS.gene26175:CDS |
| TCACTTCTCATGTCAATTCA+TGG | 0.397520 | 5.4:-57522824 | MS.gene26175:CDS |
| ATTTCCAGGTTCACAGGATC+CGG | 0.402834 | 5.4:+57524114 | None:intergenic |
| TCATTAATGGCTAGAAAACT+TGG | 0.403919 | 5.4:-57523044 | MS.gene26175:CDS |
| AGCAATTTCTTGGTAAGTAC+TGG | 0.410775 | 5.4:+57522762 | None:intergenic |
| CAATTTCATTTCCAGGTTGA+AGG | 0.411074 | 5.4:-57524220 | MS.gene26175:intron |
| TTACTCTTCCAGGGCTATGT+AGG | 0.411179 | 5.4:-57522589 | MS.gene26175:CDS |
| TTCATTTATGCGCTGCAATC+CGG | 0.411646 | 5.4:+57521437 | None:intergenic |
| TCATTTCCAGGTTGAAGGAT+TGG | 0.413551 | 5.4:-57524215 | MS.gene26175:intron |
| TAGCAAAGCACTTCTTCATA+TGG | 0.418506 | 5.4:+57525836 | None:intergenic |
| ATAATTGTTGATGGTGTCTC+AGG | 0.422446 | 5.4:-57521564 | MS.gene26175:CDS |
| TTTACCTGGCCACCAGTGTC+TGG | 0.422921 | 5.4:+57524006 | None:intergenic |
| GATCTGGCTTCCCTTCCATT+AGG | 0.423211 | 5.4:+57523105 | None:intergenic |
| TGATCCTTCTCCCTTTCTCT+AGG | 0.427018 | 5.4:+57525809 | None:intergenic |
| TAATTTCCAATAACAAGATC+TGG | 0.429386 | 5.4:+57523089 | None:intergenic |
| TTAGGCCAAATCCAGGAGTC+TGG | 0.431019 | 5.4:-57525407 | MS.gene26175:CDS |
| CAATGTGGATTGTGAACGTC+TGG | 0.431421 | 5.4:+57520403 | None:intergenic |
| ACGTAGAATGTGAGAGTGTT+TGG | 0.432164 | 5.4:+57523425 | None:intergenic |
| AATGCATTTGAAGCAGACTT+TGG | 0.434330 | 5.4:-57524839 | MS.gene26175:CDS |
| GAAATCACGTTCCAATATGA+TGG | 0.435511 | 5.4:+57521465 | None:intergenic |
| CTTCTTCCAAAGCCTTGACT+TGG | 0.437629 | 5.4:+57523656 | None:intergenic |
| ATTGGACCAAGTCAAGGCTT+TGG | 0.438859 | 5.4:-57523662 | MS.gene26175:CDS |
| CTACTCTGCTTCAATGCATC+AGG | 0.439087 | 5.4:+57525862 | None:intergenic |
| AGATAATGCAGGAAGGGTGA+AGG | 0.439483 | 5.4:-57524172 | MS.gene26175:CDS |
| ACTTAAGCGGGTTAGTTGAA+TGG | 0.440702 | 5.4:-57521914 | MS.gene26175:CDS |
| TTCAAACTCCTGGTGGCACT+TGG | 0.442030 | 5.4:+57523461 | None:intergenic |
| TGTTATCTACTTTATTAAAG+AGG | 0.443546 | 5.4:+57522435 | None:intergenic |
| CGATGCATTGCTGACTCAAA+GGG | 0.446727 | 5.4:-57521693 | MS.gene26175:CDS |
| CCATCAACAATTATTTCTGC+TGG | 0.448191 | 5.4:+57521573 | None:intergenic |
| AGACTCACCACAAGAATTTG+AGG | 0.449816 | 5.4:+57523592 | None:intergenic |
| TTTGTTAACTTCCTTCCAAA+AGG | 0.450923 | 5.4:+57521195 | None:intergenic |
| ATTAAAGAGGAGATCTTCAA+TGG | 0.461482 | 5.4:+57522448 | None:intergenic |
| CTTGCCAGACACTGGTGGCC+AGG | 0.463571 | 5.4:-57524010 | MS.gene26175:intron |
| ATTTCCAGGTTGAAGGATTG+GGG | 0.463666 | 5.4:-57524213 | MS.gene26175:intron |
| GAGTAAACCTCTCAAGATAA+GGG | 0.468220 | 5.4:+57523343 | None:intergenic |
| GTGAACCTTGTCATAGTTGG+TGG | 0.468895 | 5.4:-57521861 | MS.gene26175:CDS |
| CACTTGGTTCCTCTAGCATC+AGG | 0.470322 | 5.4:+57523477 | None:intergenic |
| AGAGTTGGTTGCTTGCCAAC+TGG | 0.472054 | 5.4:+57520959 | None:intergenic |
| TACTCTTCCAGGGCTATGTA+GGG | 0.473850 | 5.4:-57522588 | MS.gene26175:CDS |
| AGTACTTACCAAGAAATTGC+TGG | 0.475992 | 5.4:-57522760 | MS.gene26175:CDS |
| GGTTCACAGGATCCGGAGCT+TGG | 0.476030 | 5.4:+57524121 | None:intergenic |
| CACAGATTACCTCAAATTCA+AGG | 0.476544 | 5.4:-57525334 | MS.gene26175:CDS |
| GTCCGCTTCAAGGTATGTGT+TGG | 0.479582 | 5.4:+57525907 | None:intergenic |
| CTTGAATTTGAGGTAATCTG+TGG | 0.479667 | 5.4:+57525335 | None:intergenic |
| TGAGTAAACCTCTCAAGATA+AGG | 0.482349 | 5.4:+57523342 | None:intergenic |
| AGTACTGGTTATGATGAAAT+CGG | 0.483236 | 5.4:+57522777 | None:intergenic |
| AGAAAGGAATCTTGCGCCAA+TGG | 0.483395 | 5.4:-57523386 | MS.gene26175:CDS |
| AAAGGATGGGGAGATAATGC+AGG | 0.486672 | 5.4:-57524183 | MS.gene26175:CDS |
| CATACATACTCCCAGACTCC+TGG | 0.488713 | 5.4:+57525396 | None:intergenic |
| GAAAGGAATCTTGCGCCAAT+GGG | 0.490101 | 5.4:-57523385 | MS.gene26175:CDS |
| CCAGCAGAAATAATTGTTGA+TGG | 0.490757 | 5.4:-57521573 | MS.gene26175:CDS |
| ATGAAGACTCAGATGTTAAG+TGG | 0.491444 | 5.4:-57522867 | MS.gene26175:CDS |
| CTAATTGCAAAGGCTACATA+TGG | 0.493536 | 5.4:+57525426 | None:intergenic |
| GTTCACAATCCACATTGAAA+AGG | 0.494536 | 5.4:-57520397 | MS.gene26175:intron |
| AGCTCCGGATCCTGTGAACC+TGG | 0.494693 | 5.4:-57524118 | MS.gene26175:CDS |
| AAGAGGAGATCTTCAATGGC+AGG | 0.497771 | 5.4:+57522452 | None:intergenic |
| AGGTGCAGCTATATTGAACT+TGG | 0.502677 | 5.4:+57522538 | None:intergenic |
| GAACAAGAGGCTAAGAAACT+TGG | 0.507784 | 5.4:-57521883 | MS.gene26175:CDS |
| GAGCCTTGTTGTTTGAGAGT+TGG | 0.508078 | 5.4:+57520944 | None:intergenic |
| GTTATTGGAAATTACACAGA+TGG | 0.508428 | 5.4:-57523080 | MS.gene26175:CDS |
| CATTGATAGCTTCAAACTCC+TGG | 0.511650 | 5.4:+57523451 | None:intergenic |
| TTGAATTTGAGGTAATCTGT+GGG | 0.512878 | 5.4:+57525336 | None:intergenic |
| CTTGATTCATCTCCATTGAG+AGG | 0.513096 | 5.4:+57521528 | None:intergenic |
| AGCGGGTTAGTTGAATGGTA+TGG | 0.513516 | 5.4:-57521909 | MS.gene26175:CDS |
| GAAACCAATAATCTTCTCAA+TGG | 0.514548 | 5.4:-57521958 | MS.gene26175:CDS |
| GGCTATGTAGGGTTGTTTCA+GGG | 0.514946 | 5.4:-57522577 | MS.gene26175:CDS |
| TTACCTCAAATTCAAGGAAA+GGG | 0.515471 | 5.4:-57525328 | MS.gene26175:CDS |
| GTTCTTGGCTTGCCAGACAC+TGG | 0.515609 | 5.4:-57524018 | MS.gene26175:CDS |
| ATCAGAAGTACTCCAAGCTC+CGG | 0.522664 | 5.4:-57524133 | MS.gene26175:CDS |
| TTCCACATTGATCCTCTCAA+TGG | 0.523550 | 5.4:-57521540 | MS.gene26175:CDS |
| GGCAAAAGCACAGACTATAG+TGG | 0.530206 | 5.4:-57524714 | MS.gene26175:CDS |
| CTTAACTTTGACAGGTAACA+AGG | 0.533143 | 5.4:-57523506 | MS.gene26175:intron |
| GCATGACTTTCATACTGTCC+TGG | 0.533606 | 5.4:+57522617 | None:intergenic |
| TTTGCTAAGTACCTAGAGAA+AGG | 0.536077 | 5.4:-57525820 | MS.gene26175:CDS |
| CCTTGATTAGTAGCAAAAGT+TGG | 0.536164 | 5.4:+57521600 | None:intergenic |
| ATTACCTCAAATTCAAGGAA+AGG | 0.536681 | 5.4:-57525329 | MS.gene26175:CDS |
| TTTGCAATTAGGCCAAATCC+AGG | 0.538416 | 5.4:-57525414 | MS.gene26175:CDS |
| TTGGTGAACCTTGTCATAGT+TGG | 0.540805 | 5.4:-57521864 | MS.gene26175:CDS |
| CTCGGCTGCAAAGCTTCAGA+TGG | 0.543389 | 5.4:-57524528 | MS.gene26175:CDS |
| TCGATGCATTGCTGACTCAA+AGG | 0.544831 | 5.4:-57521694 | MS.gene26175:CDS |
| CTCTCAAACAACAAGGCTCT+AGG | 0.545501 | 5.4:-57520940 | MS.gene26175:intron |
| GAAGATATATGCAAACAAGT+TGG | 0.545929 | 5.4:-57521239 | MS.gene26175:CDS |
| ATGTTGTGAAGAACTTAAGC+GGG | 0.548780 | 5.4:-57521926 | MS.gene26175:CDS |
| TCATGAATTAATGGAAGAAG+TGG | 0.551105 | 5.4:-57525779 | MS.gene26175:CDS |
| GAAACAACCCTACATAGCCC+TGG | 0.551996 | 5.4:+57522581 | None:intergenic |
| TTCAAAATCAAAAGATAGAG+AGG | 0.553369 | 5.4:-57521826 | MS.gene26175:CDS |
| CTTGGCTTGCCAGACACTGG+TGG | 0.554446 | 5.4:-57524015 | MS.gene26175:CDS |
| TAGGCCAAATCCAGGAGTCT+GGG | 0.558832 | 5.4:-57525406 | MS.gene26175:CDS |
| TTGTTGAAACTAAATCATCA+TGG | 0.559548 | 5.4:-57524686 | MS.gene26175:CDS |
| TTTCCAGGTTGAAGGATTGG+GGG | 0.562858 | 5.4:-57524212 | MS.gene26175:intron |
| AACTAAAGGGACAATTCAGA+TGG | 0.563580 | 5.4:-57521758 | MS.gene26175:CDS |
| TTATCTTGAGAGGTTTACTC+AGG | 0.564285 | 5.4:-57523340 | MS.gene26175:intron |
| TTATAAACCTCAAATTCTTG+TGG | 0.564326 | 5.4:-57523599 | MS.gene26175:intron |
| GATAAATGACACGTTGAGCT+CGG | 0.568356 | 5.4:-57524546 | MS.gene26175:CDS |
| TTGCTAAGTACCTAGAGAAA+GGG | 0.568510 | 5.4:-57525819 | MS.gene26175:CDS |
| ATTGCAAAGGCTACATATGG+TGG | 0.571806 | 5.4:+57525429 | None:intergenic |
| CAATAATCTTCTCAATGGCA+AGG | 0.572371 | 5.4:-57521953 | MS.gene26175:CDS |
| CCAAATGCTTCATACAAAGC+AGG | 0.573499 | 5.4:+57521657 | None:intergenic |
| GATTGCAGCGCATAAATGAA+TGG | 0.573820 | 5.4:-57521434 | MS.gene26175:intron |
| ACATTTACCCTTATCTTGAG+AGG | 0.575762 | 5.4:-57523350 | MS.gene26175:CDS |
| TGGATTTGGCCTAATTGCAA+AGG | 0.577939 | 5.4:+57525416 | None:intergenic |
| CTTTATATTGAGCTCTACAC+AGG | 0.580216 | 5.4:-57525701 | MS.gene26175:intron |
| TAGATACTTTGATCGGCACC+AGG | 0.582476 | 5.4:+57522518 | None:intergenic |
| GTGGATATCTAGCAGAGAAG+AGG | 0.585549 | 5.4:-57521980 | MS.gene26175:CDS |
| TAGAGGAACCAAGTGCCACC+AGG | 0.586416 | 5.4:-57523469 | MS.gene26175:CDS |
| ATGCTGCATTTACTCTTCCA+GGG | 0.587477 | 5.4:-57522598 | MS.gene26175:CDS |
| CATTAATGGCTAGAAAACTT+GGG | 0.588048 | 5.4:-57523043 | MS.gene26175:CDS |
| TTACATATTGGACCAAGTCA+AGG | 0.590231 | 5.4:-57523668 | MS.gene26175:CDS |
| TGGAACGTGATTTCTGCGGC+CGG | 0.591424 | 5.4:-57521456 | MS.gene26175:CDS |
| ATGGGGAGATAATGCAGGAA+GGG | 0.592050 | 5.4:-57524178 | MS.gene26175:CDS |
| AAATCACGTTCCAATATGAT+GGG | 0.592482 | 5.4:+57521466 | None:intergenic |
| GATGGGGAGATAATGCAGGA+AGG | 0.601426 | 5.4:-57524179 | MS.gene26175:CDS |
| TACTAAGAATTAAGCAACAA+GGG | 0.601632 | 5.4:-57523627 | MS.gene26175:CDS |
| TGTCGAAGCGAGACACCCAT+TGG | 0.604105 | 5.4:+57523370 | None:intergenic |
| AATGGTATGGCAAGAACAAG+AGG | 0.607213 | 5.4:-57521896 | MS.gene26175:CDS |
| TAGAAAACTTGGGATAACTC+AGG | 0.607985 | 5.4:-57523033 | MS.gene26175:intron |
| CAAACAAGTTGGTAAATATG+GGG | 0.611526 | 5.4:-57521228 | MS.gene26175:CDS |
| CTTACCAAGAAATTGCTGGA+AGG | 0.614950 | 5.4:-57522756 | MS.gene26175:intron |
| ATTTCCAATTGAAGAAGACA+AGG | 0.616302 | 5.4:+57524787 | None:intergenic |
| CTCGGAGGACCTCTCTGTTG+AGG | 0.619017 | 5.4:-57525367 | MS.gene26175:CDS |
| AGTACCTAGAGAAAGGGAGA+AGG | 0.621869 | 5.4:-57525813 | MS.gene26175:CDS |
| GATGTTGTGAAGAACTTAAG+CGG | 0.622437 | 5.4:-57521927 | MS.gene26175:CDS |
| GATGAACCTCCAAAACCAGT+TGG | 0.627880 | 5.4:-57520974 | MS.gene26175:CDS |
| CAACCAACTCTCAAACAACA+AGG | 0.628977 | 5.4:-57520947 | MS.gene26175:CDS |
| AGAGGAGATCTTCAATGGCA+GGG | 0.629397 | 5.4:+57522453 | None:intergenic |
| AAGTTCAATATAGCTGCACC+TGG | 0.631221 | 5.4:-57522536 | MS.gene26175:CDS |
| CTCCAACACATACCTTGAAG+CGG | 0.632080 | 5.4:-57525909 | MS.gene26175:CDS |
| AGTTAACAAAGAGCAAAATG+AGG | 0.635410 | 5.4:-57521182 | MS.gene26175:CDS |
| AGGGAAATAGATACTTTGAT+CGG | 0.639658 | 5.4:+57522511 | None:intergenic |
| GGTGCAGCTATATTGAACTT+GGG | 0.641192 | 5.4:+57522539 | None:intergenic |
| GAATTTGAGGTAATCTGTGG+GGG | 0.644323 | 5.4:+57525338 | None:intergenic |
| GGAGTATGTATGTGTCAACT+CGG | 0.646575 | 5.4:-57525385 | MS.gene26175:CDS |
| ATACTAAGAATTAAGCAACA+AGG | 0.656208 | 5.4:-57523628 | MS.gene26175:CDS |
| TGATAGCTTCAAACTCCTGG+TGG | 0.660620 | 5.4:+57523454 | None:intergenic |
| TGAATTTGAGGTAATCTGTG+GGG | 0.661174 | 5.4:+57525337 | None:intergenic |
| CTCCATTGAGAGGATCAATG+TGG | 0.693616 | 5.4:+57521538 | None:intergenic |
| GTCATTGAAGCAATGAACTG+TGG | 0.697770 | 5.4:-57521627 | MS.gene26175:CDS |
| CAGACTGATCGATATCGCAA+CGG | 0.702884 | 5.4:-57521726 | MS.gene26175:CDS |
| ATATTGGAACGTGATTTCTG+CGG | 0.707520 | 5.4:-57521460 | MS.gene26175:CDS |
| AGAAGCCACCAACTATGACA+AGG | 0.713700 | 5.4:+57521856 | None:intergenic |
| GGGTGATAGCCTCAACAGAG+AGG | 0.723003 | 5.4:+57525358 | None:intergenic |
| GTATGTATGTGTCAACTCGG+AGG | 0.730584 | 5.4:-57525382 | MS.gene26175:CDS |
| AGGTTGATACCTGATGCTAG+AGG | 0.743701 | 5.4:-57523486 | MS.gene26175:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAATAAAATTAAA+GGG | + | chr5.4:57524848-57524867 | None:intergenic | 0.0% |
| !! | TAAAAATAAAATAAAATTAA+AGG | + | chr5.4:57524849-57524868 | None:intergenic | 0.0% |
| !! | AACAAATATTAATAAATGAA+AGG | + | chr5.4:57523489-57523508 | None:intergenic | 10.0% |
| !! | TAGATTTATTTATATAATCT+TGG | - | chr5.4:57525833-57525852 | MS.gene26175:CDS | 10.0% |
| !! | TATAAGTATTAAGTAATATA+AGG | - | chr5.4:57522253-57522272 | MS.gene26175:intron | 10.0% |
| !!! | TTTTTTATATTTTGTCTAAT+AGG | - | chr5.4:57520530-57520549 | MS.gene26175:intron | 10.0% |
| !! | AATTGAAAAATATCAACTAA+AGG | - | chr5.4:57524434-57524453 | MS.gene26175:intron | 15.0% |
| !! | ACAAAAATAGAAAGAATTTA+CGG | + | chr5.4:57525687-57525706 | None:intergenic | 15.0% |
| !! | ATAAGAAATTATAGAACATA+TGG | + | chr5.4:57525066-57525085 | None:intergenic | 15.0% |
| !! | ATTAAAATTAATGTTCCTTA+TGG | + | chr5.4:57522233-57522252 | None:intergenic | 15.0% |
| !! | ATTGAAAAATATCAACTAAA+GGG | - | chr5.4:57524435-57524454 | MS.gene26175:intron | 15.0% |
| !! | CAAATAAGAAAATATTGTTT+CGG | - | chr5.4:57525345-57525364 | MS.gene26175:CDS | 15.0% |
| !! | TAATTTCTTATTCAAGAATT+TGG | - | chr5.4:57525075-57525094 | MS.gene26175:intron | 15.0% |
| !! | TGTTAAATACATATTTAAGT+TGG | - | chr5.4:57525660-57525679 | MS.gene26175:intron | 15.0% |
| !! | TTATTAATTGTCTATTAAAG+AGG | - | chr5.4:57521780-57521799 | MS.gene26175:CDS | 15.0% |
| !!! | AAATGAAAGAAATTATGTTT+TGG | - | chr5.4:57520469-57520488 | MS.gene26175:intron | 15.0% |
| !!! | TTAACATTTTCTATATTGTA+GGG | - | chr5.4:57521333-57521352 | MS.gene26175:intron | 15.0% |
| !! | AAAACTCATTATGCAATAAT+TGG | + | chr5.4:57525140-57525159 | None:intergenic | 20.0% |
| !! | AAAAGCAAATATCAATCATT+TGG | + | chr5.4:57524188-57524207 | None:intergenic | 20.0% |
| !! | AACATAGCTAAAAACAAATT+TGG | + | chr5.4:57521806-57521825 | None:intergenic | 20.0% |
| !! | AGATATGATTTACCATATAA+AGG | + | chr5.4:57525425-57525444 | None:intergenic | 20.0% |
| !! | TGAAATTATTATAGAAACAG+TGG | - | chr5.4:57524207-57524226 | MS.gene26175:CDS | 20.0% |
| !! | TGTTATCTACTTTATTAAAG+AGG | + | chr5.4:57523774-57523793 | None:intergenic | 20.0% |
| !! | TTGTTTGAATATCTTATGTA+AGG | - | chr5.4:57520972-57520991 | MS.gene26175:CDS | 20.0% |
| !!! | AAAATTAATTTTCTTGCTGA+TGG | + | chr5.4:57524911-57524930 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAGAATTTGAG+AGG | - | chr5.4:57525303-57525322 | MS.gene26175:intron | 20.0% |
| !!! | CATTTTTCTCTCATTATTAT+CGG | + | chr5.4:57525578-57525597 | None:intergenic | 20.0% |
| !!! | CTTAACATTTTCTATATTGT+AGG | - | chr5.4:57521332-57521351 | MS.gene26175:intron | 20.0% |
| !!! | TTTAGCTATGTTTAAAATCT+CGG | - | chr5.4:57521814-57521833 | MS.gene26175:CDS | 20.0% |
| ! | AAAAACTTAGTATTACTAGC+TGG | - | chr5.4:57522464-57522483 | MS.gene26175:CDS | 25.0% |
| ! | AAAGAATATGTAACTGTTGT+TGG | + | chr5.4:57521593-57521612 | None:intergenic | 25.0% |
| ! | AAATTACACAGATGGAAATT+TGG | - | chr5.4:57523134-57523153 | MS.gene26175:intron | 25.0% |
| ! | AATGTCTGTGATCAAAATTT+AGG | + | chr5.4:57521929-57521948 | None:intergenic | 25.0% |
| ! | AGAGACACATAAATCTTATA+AGG | + | chr5.4:57525509-57525528 | None:intergenic | 25.0% |
| ! | ATACTAAGAATTAAGCAACA+AGG | - | chr5.4:57522578-57522597 | MS.gene26175:CDS | 25.0% |
| ! | ATTAATATCAACCAAAGTGT+TGG | + | chr5.4:57523056-57523075 | None:intergenic | 25.0% |
| ! | ATTATACTCTTAACTTTGAC+AGG | - | chr5.4:57522692-57522711 | MS.gene26175:intron | 25.0% |
| ! | ATTCCTTTCTCTGTATTAAA+AGG | + | chr5.4:57522810-57522829 | None:intergenic | 25.0% |
| ! | CATATCAAAAATTTGAGCTA+AGG | - | chr5.4:57521749-57521768 | MS.gene26175:CDS | 25.0% |
| ! | CATGAAACTTCATGAATTAA+TGG | - | chr5.4:57520418-57520437 | MS.gene26175:intron | 25.0% |
| ! | CCTTATTGTGATTGAAAATT+AGG | - | chr5.4:57523283-57523302 | MS.gene26175:intron | 25.0% |
| ! | CGAATGTATATAGTCTAATT+TGG | + | chr5.4:57525473-57525492 | None:intergenic | 25.0% |
| ! | GAATAATCTCAACCTTTATA+TGG | - | chr5.4:57525410-57525429 | MS.gene26175:CDS | 25.0% |
| ! | GTAATTATATACATCTGATG+TGG | - | chr5.4:57521869-57521888 | MS.gene26175:CDS | 25.0% |
| ! | GTTAAGTAAATCTATCTTCT+TGG | + | chr5.4:57521299-57521318 | None:intergenic | 25.0% |
| ! | TAATTTCCAATAACAAGATC+TGG | + | chr5.4:57523120-57523139 | None:intergenic | 25.0% |
| ! | TACTAAGAATTAAGCAACAA+GGG | - | chr5.4:57522579-57522598 | MS.gene26175:CDS | 25.0% |
| ! | TACTATCTTAGAATTTGAGT+TGG | + | chr5.4:57523947-57523966 | None:intergenic | 25.0% |
| ! | TGAAAGGGAAACTAAATAAA+GGG | + | chr5.4:57523216-57523235 | None:intergenic | 25.0% |
| ! | TGTTAGCATGAAAAATCAAA+TGG | + | chr5.4:57525746-57525765 | None:intergenic | 25.0% |
| ! | TTACAACAAAAACTAGTATG+AGG | + | chr5.4:57523910-57523929 | None:intergenic | 25.0% |
| ! | TTATAAACCTCAAATTCTTG+TGG | - | chr5.4:57522607-57522626 | MS.gene26175:CDS | 25.0% |
| ! | TTATAAGATTTATGTGTCTC+TGG | - | chr5.4:57525508-57525527 | MS.gene26175:intron | 25.0% |
| ! | TTCAAAATCAAAAGATAGAG+AGG | - | chr5.4:57524380-57524399 | MS.gene26175:intron | 25.0% |
| ! | TTGAAAGGGAAACTAAATAA+AGG | + | chr5.4:57523217-57523236 | None:intergenic | 25.0% |
| ! | TTGTTGAAACTAAATCATCA+TGG | - | chr5.4:57521520-57521539 | MS.gene26175:CDS | 25.0% |
| ! | TTTCAAAGTTCTTAACTTCA+AGG | - | chr5.4:57521455-57521474 | MS.gene26175:CDS | 25.0% |
| !! | AAATTTGGTAGCATCATTAA+TGG | - | chr5.4:57523149-57523168 | MS.gene26175:intron | 25.0% |
| !! | ACACTTTGGTTGATATTAAT+AGG | - | chr5.4:57523056-57523075 | MS.gene26175:CDS | 25.0% |
| !! | ACATAAGATTTTATATGTCG+CGG | + | chr5.4:57521901-57521920 | None:intergenic | 25.0% |
| !! | ATCACTACTTTGAAAATTGT+TGG | + | chr5.4:57522134-57522153 | None:intergenic | 25.0% |
| !! | CCTAATTTTCAATCACAATA+AGG | + | chr5.4:57523286-57523305 | None:intergenic | 25.0% |
| !! | CTTTTTCTTATAGCTATACA+TGG | - | chr5.4:57524945-57524964 | MS.gene26175:intron | 25.0% |
| !! | TAAATCTAACCTTTTCAATG+TGG | + | chr5.4:57525821-57525840 | None:intergenic | 25.0% |
| !! | TTAAAGGGGTCTTATAAAAA+TGG | + | chr5.4:57524833-57524852 | None:intergenic | 25.0% |
| !! | TTTTCTATTACGGTAAAAAG+CGG | - | chr5.4:57522955-57522974 | MS.gene26175:intron | 25.0% |
| !! | TTTTGTCTTTTTCTGTGTAA+GGG | + | chr5.4:57523717-57523736 | None:intergenic | 25.0% |
| !!! | AGCAAGTGTTTTTTTTAGTA+AGG | + | chr5.4:57525888-57525907 | None:intergenic | 25.0% |
| !!! | CATACTAGTTTTTGTTGTAA+GGG | - | chr5.4:57523910-57523929 | MS.gene26175:intron | 25.0% |
| !!! | CGATTTTTTATCTTGTACTA+TGG | - | chr5.4:57522906-57522925 | MS.gene26175:intron | 25.0% |
| !!! | CTCTATCTTTTGATTTTGAA+GGG | + | chr5.4:57524380-57524399 | None:intergenic | 25.0% |
| !!! | GAAAAGTTTTAAAATTTGCG+TGG | + | chr5.4:57524137-57524156 | None:intergenic | 25.0% |
| !!! | GAAAGAAATTATGTTTTGGA+GGG | - | chr5.4:57520473-57520492 | MS.gene26175:intron | 25.0% |
| !!! | TCATACTAGTTTTTGTTGTA+AGG | - | chr5.4:57523909-57523928 | MS.gene26175:intron | 25.0% |
| !!! | TCTCTATCTTTTGATTTTGA+AGG | + | chr5.4:57524381-57524400 | None:intergenic | 25.0% |
| !!! | TGAAAGAAATTATGTTTTGG+AGG | - | chr5.4:57520472-57520491 | MS.gene26175:intron | 25.0% |
| !!! | TTAGCCTTTGAATTTTAATG+TGG | - | chr5.4:57520722-57520741 | MS.gene26175:intron | 25.0% |
| !!! | TTCTTTTTTCCTTTTCTTCT+TGG | - | chr5.4:57525771-57525790 | MS.gene26175:CDS | 25.0% |
| !!! | TTTCCCTTTCAATATTTTTG+TGG | - | chr5.4:57523225-57523244 | MS.gene26175:intron | 25.0% |
| !!! | TTTTGATATGAAGTGTCTTT+TGG | + | chr5.4:57521739-57521758 | None:intergenic | 25.0% |
| !!! | TTTTTGATTACTCAATGTGT+TGG | + | chr5.4:57520663-57520682 | None:intergenic | 25.0% |
| !!! | TTTTTTAAAGCTCTACTTGT+TGG | - | chr5.4:57521948-57521967 | MS.gene26175:CDS | 25.0% |
| AAAAATATTTCCAGGTTCAC+AGG | + | chr5.4:57522101-57522120 | None:intergenic | 30.0% | |
| AAAAGTTTAATGTGCAAGTG+TGG | + | chr5.4:57523823-57523842 | None:intergenic | 30.0% | |
| AAAGTTCATAAGAGCGAAAA+AGG | + | chr5.4:57523025-57523044 | None:intergenic | 30.0% | |
| AAAGTTTAATGTGCAAGTGT+GGG | + | chr5.4:57523822-57523841 | None:intergenic | 30.0% | |
| AAATCACGTTCCAATATGAT+GGG | + | chr5.4:57524743-57524762 | None:intergenic | 30.0% | |
| ACAACAGGTAGTTTACATAT+TGG | - | chr5.4:57522526-57522545 | MS.gene26175:CDS | 30.0% | |
| AGGGAAATAGATACTTTGAT+CGG | + | chr5.4:57523698-57523717 | None:intergenic | 30.0% | |
| AGTAAATCTATCTTCTTGGT+AGG | + | chr5.4:57521295-57521314 | None:intergenic | 30.0% | |
| AGTTAACAAAGAGCAAAATG+AGG | - | chr5.4:57525024-57525043 | MS.gene26175:intron | 30.0% | |
| ATCAAAAGATAGAGAGGAAA+TGG | - | chr5.4:57524386-57524405 | MS.gene26175:intron | 30.0% | |
| ATTAAAGAGGAGATCTTCAA+TGG | + | chr5.4:57523761-57523780 | None:intergenic | 30.0% | |
| ATTACCTCAAATTCAAGGAA+AGG | - | chr5.4:57520877-57520896 | MS.gene26175:intron | 30.0% | |
| ATTTCCAATTGAAGAAGACA+AGG | + | chr5.4:57521422-57521441 | None:intergenic | 30.0% | |
| CAGCCACAAAAATATTGAAA+GGG | + | chr5.4:57523231-57523250 | None:intergenic | 30.0% | |
| CAGGTAAAATTTCTACCATA+AGG | - | chr5.4:57522215-57522234 | MS.gene26175:intron | 30.0% | |
| CATATGTATGAATGTCAAGT+CGG | - | chr5.4:57525614-57525633 | MS.gene26175:intron | 30.0% | |
| CATTAATGGCTAGAAAACTT+GGG | - | chr5.4:57523163-57523182 | MS.gene26175:intron | 30.0% | |
| GAAACCAATAATCTTCTCAA+TGG | - | chr5.4:57524248-57524267 | MS.gene26175:intron | 30.0% | |
| GAAGAAGACAAGGTTAATTT+AGG | + | chr5.4:57521412-57521431 | None:intergenic | 30.0% | |
| GAAGATATATGCAAACAAGT+TGG | - | chr5.4:57524967-57524986 | MS.gene26175:intron | 30.0% | |
| GTTATTGGAAATTACACAGA+TGG | - | chr5.4:57523126-57523145 | MS.gene26175:CDS | 30.0% | |
| TAACTCATCTCTTAAGAATG+TGG | - | chr5.4:57521068-57521087 | MS.gene26175:intron | 30.0% | |
| TACAATTCTTCGCAATATCA+AGG | + | chr5.4:57521852-57521871 | None:intergenic | 30.0% | |
| TACTATCACTGATCTTCATT+TGG | + | chr5.4:57521260-57521279 | None:intergenic | 30.0% | |
| TCAGCCACAAAAATATTGAA+AGG | + | chr5.4:57523232-57523251 | None:intergenic | 30.0% | |
| TCATGAATTAATGGAAGAAG+TGG | - | chr5.4:57520427-57520446 | MS.gene26175:intron | 30.0% | |
| TCATTAATGGCTAGAAAACT+TGG | - | chr5.4:57523162-57523181 | MS.gene26175:intron | 30.0% | |
| TGACATGAGAAGTGATATTT+AGG | + | chr5.4:57523377-57523396 | None:intergenic | 30.0% | |
| TGCACCACATTAAAATTCAA+AGG | + | chr5.4:57520729-57520748 | None:intergenic | 30.0% | |
| TGGAAATGAAATTGGCATTA+GGG | + | chr5.4:57521980-57521999 | None:intergenic | 30.0% | |
| TTAACCTTGTCTTCTTCAAT+TGG | - | chr5.4:57521415-57521434 | MS.gene26175:intron | 30.0% | |
| TTAAGGATCACAATGCTATA+GGG | + | chr5.4:57522305-57522324 | None:intergenic | 30.0% | |
| TTACCTCAAATTCAAGGAAA+GGG | - | chr5.4:57520878-57520897 | MS.gene26175:intron | 30.0% | |
| TTCTGCTGAAAAATATTTCC+AGG | + | chr5.4:57522109-57522128 | None:intergenic | 30.0% | |
| TTGTCTTCTTCAATTGGAAA+TGG | - | chr5.4:57521421-57521440 | MS.gene26175:intron | 30.0% | |
| TTTCATTCTCTCCAATGTTA+AGG | + | chr5.4:57522322-57522341 | None:intergenic | 30.0% | |
| TTTGTTAACTTCCTTCCAAA+AGG | + | chr5.4:57525014-57525033 | None:intergenic | 30.0% | |
| ! | AAAGGGTATATGACCAAAAA+TGG | - | chr5.4:57520895-57520914 | MS.gene26175:intron | 30.0% |
| ! | CAATTTTCTTAACTGCACAA+AGG | + | chr5.4:57525719-57525738 | None:intergenic | 30.0% |
| ! | CTTATGGTAGAAATTTTACC+TGG | + | chr5.4:57522217-57522236 | None:intergenic | 30.0% |
| ! | CTTTTGTCTTTTTCTGTGTA+AGG | + | chr5.4:57523718-57523737 | None:intergenic | 30.0% |
| ! | GAATTTGGTTAGTCAATGTT+TGG | - | chr5.4:57525090-57525109 | MS.gene26175:intron | 30.0% |
| ! | TTCAATTTGAAGTAGTGACA+AGG | + | chr5.4:57522429-57522448 | None:intergenic | 30.0% |
| ! | TTCTCAGTTCATGGTTATTT+TGG | - | chr5.4:57522155-57522174 | MS.gene26175:intron | 30.0% |
| ! | TTGAATTTGAGGTAATCTGT+GGG | + | chr5.4:57520873-57520892 | None:intergenic | 30.0% |
| ! | TTTTTGTTGCATGTAGAAAG+AGG | + | chr5.4:57522655-57522674 | None:intergenic | 30.0% |
| !! | ACTTTGGAGCATTTGATATT+GGG | - | chr5.4:57521383-57521402 | MS.gene26175:intron | 30.0% |
| !! | AGTACTGGTTATGATGAAAT+CGG | + | chr5.4:57523432-57523451 | None:intergenic | 30.0% |
| !! | CAAAACATAGTTCTAAACTG+CGG | + | chr5.4:57523000-57523019 | None:intergenic | 30.0% |
| !! | CAAACAAGTTGGTAAATATG+GGG | - | chr5.4:57524978-57524997 | MS.gene26175:intron | 30.0% |
| !! | GCAAACAAGTTGGTAAATAT+GGG | - | chr5.4:57524977-57524996 | MS.gene26175:intron | 30.0% |
| !! | TCAATATTTTTGTGGCTGAA+AGG | - | chr5.4:57523233-57523252 | MS.gene26175:intron | 30.0% |
| !! | TCTCAGTTCATGGTTATTTT+GGG | - | chr5.4:57522156-57522175 | MS.gene26175:intron | 30.0% |
| !! | TGCAAACAAGTTGGTAAATA+TGG | - | chr5.4:57524976-57524995 | MS.gene26175:intron | 30.0% |
| !!! | TGTAAACTACCTGTTGTTTT+TGG | + | chr5.4:57522523-57522542 | None:intergenic | 30.0% |
| AAAAACACTTGCTTCCTTTC+AGG | - | chr5.4:57525895-57525914 | MS.gene26175:CDS | 35.0% | |
| AACTAAAGGGACAATTCAGA+TGG | - | chr5.4:57524448-57524467 | MS.gene26175:intron | 35.0% | |
| AATCATCATGGAGAAGTAAG+TGG | - | chr5.4:57521532-57521551 | MS.gene26175:CDS | 35.0% | |
| ACATTTACCCTTATCTTGAG+AGG | - | chr5.4:57522856-57522875 | MS.gene26175:CDS | 35.0% | |
| AGCAATTTCTTGGTAAGTAC+TGG | + | chr5.4:57523447-57523466 | None:intergenic | 35.0% | |
| AGCATTGTGATCCTTAACAT+TGG | - | chr5.4:57522308-57522327 | MS.gene26175:intron | 35.0% | |
| AGTACTTACCAAGAAATTGC+TGG | - | chr5.4:57523446-57523465 | MS.gene26175:CDS | 35.0% | |
| AGTCTACTTAAGATCCAATC+GGG | - | chr5.4:57523971-57523990 | MS.gene26175:intron | 35.0% | |
| ATACCCTTTCCTTGAATTTG+AGG | + | chr5.4:57520884-57520903 | None:intergenic | 35.0% | |
| ATATTGGAACGTGATTTCTG+CGG | - | chr5.4:57524746-57524765 | MS.gene26175:CDS | 35.0% | |
| ATGAAGACTCAGATGTTAAG+TGG | - | chr5.4:57523339-57523358 | MS.gene26175:intron | 35.0% | |
| ATGTTGTGAAGAACTTAAGC+GGG | - | chr5.4:57524280-57524299 | MS.gene26175:intron | 35.0% | |
| CAAGGTTTAAGAAAGTCTTG+CGG | + | chr5.4:57522411-57522430 | None:intergenic | 35.0% | |
| CAATAATCTTCTCAATGGCA+AGG | - | chr5.4:57524253-57524272 | MS.gene26175:intron | 35.0% | |
| CACAGATTACCTCAAATTCA+AGG | - | chr5.4:57520872-57520891 | MS.gene26175:intron | 35.0% | |
| CATATGTAGCCTTTGCAATT+AGG | - | chr5.4:57520781-57520800 | MS.gene26175:intron | 35.0% | |
| CCAGCAGAAATAATTGTTGA+TGG | - | chr5.4:57524633-57524652 | MS.gene26175:intron | 35.0% | |
| CCTTGATTAGTAGCAAAAGT+TGG | + | chr5.4:57524609-57524628 | None:intergenic | 35.0% | |
| CGACTTGACATTCATACATA+TGG | + | chr5.4:57525616-57525635 | None:intergenic | 35.0% | |
| CTAATGCCAATTTCATTTCC+AGG | - | chr5.4:57521979-57521998 | MS.gene26175:CDS | 35.0% | |
| CTAATTGCAAAGGCTACATA+TGG | + | chr5.4:57520783-57520802 | None:intergenic | 35.0% | |
| CTGGAAATGAAATTGGCATT+AGG | + | chr5.4:57521981-57522000 | None:intergenic | 35.0% | |
| CTTAACTTTGACAGGTAACA+AGG | - | chr5.4:57522700-57522719 | MS.gene26175:intron | 35.0% | |
| CTTCAACCTGGAAATGAAAT+TGG | + | chr5.4:57521988-57522007 | None:intergenic | 35.0% | |
| CTTGCCATTGAGAAGATTAT+TGG | + | chr5.4:57524255-57524274 | None:intergenic | 35.0% | |
| CTTTATATTGAGCTCTACAC+AGG | - | chr5.4:57520505-57520524 | MS.gene26175:intron | 35.0% | |
| GAAATCACGTTCCAATATGA+TGG | + | chr5.4:57524744-57524763 | None:intergenic | 35.0% | |
| GAGTAAACCTCTCAAGATAA+GGG | + | chr5.4:57522866-57522885 | None:intergenic | 35.0% | |
| GAGTCTACTTAAGATCCAAT+CGG | - | chr5.4:57523970-57523989 | MS.gene26175:intron | 35.0% | |
| GATGTTGTGAAGAACTTAAG+CGG | - | chr5.4:57524279-57524298 | MS.gene26175:intron | 35.0% | |
| GGAGAGAATGAAATGTAATG+CGG | - | chr5.4:57522329-57522348 | MS.gene26175:intron | 35.0% | |
| GTTAAGGATCACAATGCTAT+AGG | + | chr5.4:57522306-57522325 | None:intergenic | 35.0% | |
| GTTCACAATCCACATTGAAA+AGG | - | chr5.4:57525809-57525828 | MS.gene26175:CDS | 35.0% | |
| TAAAGAATTTGTCCGCTTCA+AGG | + | chr5.4:57520312-57520331 | None:intergenic | 35.0% | |
| TAGAAAACTTGGGATAACTC+AGG | - | chr5.4:57523173-57523192 | MS.gene26175:intron | 35.0% | |
| TCACTGATCTTCATTTGGTA+TGG | + | chr5.4:57521255-57521274 | None:intergenic | 35.0% | |
| TCACTTCTCATGTCAATTCA+TGG | - | chr5.4:57523382-57523401 | MS.gene26175:CDS | 35.0% | |
| TCTGTTAAAAGACTCGTTTG+AGG | - | chr5.4:57523842-57523861 | MS.gene26175:intron | 35.0% | |
| TGAGTAAACCTCTCAAGATA+AGG | + | chr5.4:57522867-57522886 | None:intergenic | 35.0% | |
| TTACATATTGGACCAAGTCA+AGG | - | chr5.4:57522538-57522557 | MS.gene26175:CDS | 35.0% | |
| TTATCTTGAGAGGTTTACTC+AGG | - | chr5.4:57522866-57522885 | MS.gene26175:CDS | 35.0% | |
| TTCAAGGACAACTGGAAAAT+TGG | - | chr5.4:57521471-57521490 | MS.gene26175:CDS | 35.0% | |
| TTCCATTAGGTCCAAAATCT+TGG | + | chr5.4:57523091-57523110 | None:intergenic | 35.0% | |
| TTCTTAACTTCAAGGACAAC+TGG | - | chr5.4:57521463-57521482 | MS.gene26175:CDS | 35.0% | |
| TTGCTAAGTACCTAGAGAAA+GGG | - | chr5.4:57520387-57520406 | MS.gene26175:intron | 35.0% | |
| TTGTGATACGTTAATGTCAC+AGG | - | chr5.4:57525186-57525205 | MS.gene26175:intron | 35.0% | |
| TTTCCTTCTTACCAACACTT+TGG | - | chr5.4:57523042-57523061 | MS.gene26175:CDS | 35.0% | |
| TTTGCTAAGTACCTAGAGAA+AGG | - | chr5.4:57520386-57520405 | MS.gene26175:intron | 35.0% | |
| TTTGGCAACAAGTGTTAGAA+AGG | + | chr5.4:57522505-57522524 | None:intergenic | 35.0% | |
| ! | AACCAAGATTTTGGACCTAA+TGG | - | chr5.4:57523086-57523105 | MS.gene26175:CDS | 35.0% |
| ! | AAGATTTTGGACCTAATGGA+AGG | - | chr5.4:57523090-57523109 | MS.gene26175:CDS | 35.0% |
| ! | AATGCATTTGAAGCAGACTT+TGG | - | chr5.4:57521367-57521386 | MS.gene26175:intron | 35.0% |
| ! | ACTTTTGCTACTAATCAAGG+AGG | - | chr5.4:57524609-57524628 | MS.gene26175:intron | 35.0% |
| ! | AGATTTTGGACCTAATGGAA+GGG | - | chr5.4:57523091-57523110 | MS.gene26175:CDS | 35.0% |
| ! | CAATTTCATTTCCAGGTTGA+AGG | - | chr5.4:57521986-57522005 | MS.gene26175:intron | 35.0% |
| ! | CCAACTTTTGCTACTAATCA+AGG | - | chr5.4:57524606-57524625 | MS.gene26175:intron | 35.0% |
| ! | CGCTGCAAACTTTTCTATTA+CGG | - | chr5.4:57522945-57522964 | MS.gene26175:intron | 35.0% |
| ! | CTTGAATTTGAGGTAATCTG+TGG | + | chr5.4:57520874-57520893 | None:intergenic | 35.0% |
| ! | GAGAAATGACACACCATTTT+TGG | + | chr5.4:57520911-57520930 | None:intergenic | 35.0% |
| ! | GGGTCTTATAAAAATGGACA+AGG | + | chr5.4:57524827-57524846 | None:intergenic | 35.0% |
| ! | GTGCCTTTTAATACAGAGAA+AGG | - | chr5.4:57522804-57522823 | MS.gene26175:CDS | 35.0% |
| ! | GTTTCGGTATAAAGTGTCAT+AGG | - | chr5.4:57525361-57525380 | MS.gene26175:CDS | 35.0% |
| ! | TAGCAAAGCACTTCTTCATA+TGG | + | chr5.4:57520373-57520392 | None:intergenic | 35.0% |
| ! | TGAATTTGAGGTAATCTGTG+GGG | + | chr5.4:57520872-57520891 | None:intergenic | 35.0% |
| ! | TTTGTTGTAAGGGTTGAGTT+AGG | - | chr5.4:57523920-57523939 | MS.gene26175:intron | 35.0% |
| !! | ACTTTACAAACCGGTTTTGT+AGG | - | chr5.4:57524100-57524119 | MS.gene26175:CDS | 35.0% |
| !! | ATAATTGTTGATGGTGTCTC+AGG | - | chr5.4:57524642-57524661 | MS.gene26175:intron | 35.0% |
| !! | CCATCAACAATTATTTCTGC+TGG | + | chr5.4:57524636-57524655 | None:intergenic | 35.0% |
| !! | CTTCCTTTCAGGTTATTACT+TGG | - | chr5.4:57525906-57525925 | MS.gene26175:CDS | 35.0% |
| !! | CTTTACAAACCGGTTTTGTA+GGG | - | chr5.4:57524101-57524120 | MS.gene26175:CDS | 35.0% |
| !! | GACTTTGGAGCATTTGATAT+TGG | - | chr5.4:57521382-57521401 | MS.gene26175:intron | 35.0% |
| !!! | TATGTTTTGGAGGGAAATCT+TGG | - | chr5.4:57520482-57520501 | MS.gene26175:intron | 35.0% |
| AAGTTCAATATAGCTGCACC+TGG | - | chr5.4:57523670-57523689 | MS.gene26175:CDS | 40.0% | |
| AATGGTATGGCAAGAACAAG+AGG | - | chr5.4:57524310-57524329 | MS.gene26175:intron | 40.0% | |
| ACAAGGAAACATCTCAAGAG+GGG | + | chr5.4:57524810-57524829 | None:intergenic | 40.0% | |
| AGACTCACCACAAGAATTTG+AGG | + | chr5.4:57522617-57522636 | None:intergenic | 40.0% | |
| AGCTACTAGCTAATCTTTCG+AGG | + | chr5.4:57521172-57521191 | None:intergenic | 40.0% | |
| AGGTGCAGCTATATTGAACT+TGG | + | chr5.4:57523671-57523690 | None:intergenic | 40.0% | |
| ATGCTGCATTTACTCTTCCA+GGG | - | chr5.4:57523608-57523627 | MS.gene26175:CDS | 40.0% | |
| ATTGCAAAGGCTACATATGG+TGG | + | chr5.4:57520780-57520799 | None:intergenic | 40.0% | |
| CAAACCTTCCAGCAATTTCT+TGG | + | chr5.4:57523457-57523476 | None:intergenic | 40.0% | |
| CAACCAACTCTCAAACAACA+AGG | - | chr5.4:57525259-57525278 | MS.gene26175:intron | 40.0% | |
| CCAAATGCTTCATACAAAGC+AGG | + | chr5.4:57524552-57524571 | None:intergenic | 40.0% | |
| CCTGAAAATGCGTTTGTAAG+TGG | - | chr5.4:57524065-57524084 | MS.gene26175:CDS | 40.0% | |
| CTAACTCAACCCTACAAAAC+CGG | + | chr5.4:57524113-57524132 | None:intergenic | 40.0% | |
| CTAATTGTAGCACACGAAGT+TGG | + | chr5.4:57521044-57521063 | None:intergenic | 40.0% | |
| CTTACCAAGAAATTGCTGGA+AGG | - | chr5.4:57523450-57523469 | MS.gene26175:CDS | 40.0% | |
| CTTGATTCATCTCCATTGAG+AGG | + | chr5.4:57524681-57524700 | None:intergenic | 40.0% | |
| GAAAATGCGTTTGTAAGTGG+CGG | - | chr5.4:57524068-57524087 | MS.gene26175:CDS | 40.0% | |
| GAACAAGAGGCTAAGAAACT+TGG | - | chr5.4:57524323-57524342 | MS.gene26175:intron | 40.0% | |
| GACAAGGAAACATCTCAAGA+GGG | + | chr5.4:57524811-57524830 | None:intergenic | 40.0% | |
| GATAAATGACACGTTGAGCT+CGG | - | chr5.4:57521660-57521679 | MS.gene26175:CDS | 40.0% | |
| GATTGCAGCGCATAAATGAA+TGG | - | chr5.4:57524772-57524791 | MS.gene26175:CDS | 40.0% | |
| GCAAAGTAGACCCATCATAT+TGG | - | chr5.4:57524730-57524749 | MS.gene26175:CDS | 40.0% | |
| GCTCCAAGTAATAACCTGAA+AGG | + | chr5.4:57525912-57525931 | None:intergenic | 40.0% | |
| GGAGTATGTATGTGTCAACT+CGG | - | chr5.4:57520821-57520840 | MS.gene26175:intron | 40.0% | |
| GGTGCAGCTATATTGAACTT+GGG | + | chr5.4:57523670-57523689 | None:intergenic | 40.0% | |
| GTAGTGATCTTCTCAGTTCA+TGG | - | chr5.4:57522146-57522165 | MS.gene26175:intron | 40.0% | |
| TCGTTTGAGGAGATAAAGTC+AGG | - | chr5.4:57523855-57523874 | MS.gene26175:intron | 40.0% | |
| TGCTGCAAACCAAGAAGAAA+AGG | + | chr5.4:57525783-57525802 | None:intergenic | 40.0% | |
| TGGATTTGGCCTAATTGCAA+AGG | + | chr5.4:57520793-57520812 | None:intergenic | 40.0% | |
| TGTCTCTGTGACTACAACTA+AGG | + | chr5.4:57522355-57522374 | None:intergenic | 40.0% | |
| TTCATTTATGCGCTGCAATC+CGG | + | chr5.4:57524772-57524791 | None:intergenic | 40.0% | |
| TTCCACATTGATCCTCTCAA+TGG | - | chr5.4:57524666-57524685 | MS.gene26175:intron | 40.0% | |
| TTGGTGAACCTTGTCATAGT+TGG | - | chr5.4:57524342-57524361 | MS.gene26175:intron | 40.0% | |
| TTTGCAATTAGGCCAAATCC+AGG | - | chr5.4:57520792-57520811 | MS.gene26175:intron | 40.0% | |
| ! | ATTTCCAGGTTGAAGGATTG+GGG | - | chr5.4:57521993-57522012 | MS.gene26175:intron | 40.0% |
| ! | CACTTGTTGCCAAAAACAAC+AGG | - | chr5.4:57522511-57522530 | MS.gene26175:CDS | 40.0% |
| ! | CATTGATAGCTTCAAACTCC+TGG | + | chr5.4:57522758-57522777 | None:intergenic | 40.0% |
| ! | CATTTCCAGGTTGAAGGATT+GGG | - | chr5.4:57521992-57522011 | MS.gene26175:intron | 40.0% |
| ! | CCACTTACAAACGCATTTTC+AGG | + | chr5.4:57524068-57524087 | None:intergenic | 40.0% |
| ! | CCTGCTTTGTATGAAGCATT+TGG | - | chr5.4:57524549-57524568 | MS.gene26175:CDS | 40.0% |
| ! | GAACACTTACACCTTTTGGA+AGG | - | chr5.4:57525000-57525019 | MS.gene26175:intron | 40.0% |
| ! | GAATTTGAGGTAATCTGTGG+GGG | + | chr5.4:57520871-57520890 | None:intergenic | 40.0% |
| ! | GAGGTACATAGTTCTACGTA+AGG | + | chr5.4:57521153-57521172 | None:intergenic | 40.0% |
| ! | GATTTTATATGTCGCGGTTG+AGG | + | chr5.4:57521895-57521914 | None:intergenic | 40.0% |
| ! | TACTCAATGTGTTGGACTAG+TGG | + | chr5.4:57520655-57520674 | None:intergenic | 40.0% |
| ! | TCATTTCCAGGTTGAAGGAT+TGG | - | chr5.4:57521991-57522010 | MS.gene26175:intron | 40.0% |
| ! | TGCTGATGGTGCACATAAAA+GGG | + | chr5.4:57524897-57524916 | None:intergenic | 40.0% |
| ! | TTGCTGATGGTGCACATAAA+AGG | + | chr5.4:57524898-57524917 | None:intergenic | 40.0% |
| ! | TTTTGCAGCAAAGATAGACC+AGG | - | chr5.4:57523571-57523590 | MS.gene26175:intron | 40.0% |
| !! | ACGTAGAATGTGAGAGTGTT+TGG | + | chr5.4:57522784-57522803 | None:intergenic | 40.0% |
| !! | ACTTAAGCGGGTTAGTTGAA+TGG | - | chr5.4:57524292-57524311 | MS.gene26175:intron | 40.0% |
| !! | CAAAACCGGTTTGTAAAGTG+AGG | + | chr5.4:57524099-57524118 | None:intergenic | 40.0% |
| !! | CAACCAAAGTGTTGGTAAGA+AGG | + | chr5.4:57523048-57523067 | None:intergenic | 40.0% |
| !! | CTTATGAAAGAGCGCTTGTT+AGG | - | chr5.4:57521116-57521135 | MS.gene26175:intron | 40.0% |
| !!! | TGTCTTTTGGAATTGCTGAG+AGG | + | chr5.4:57521726-57521745 | None:intergenic | 40.0% |
| AAAGGATGGGGAGATAATGC+AGG | - | chr5.4:57522023-57522042 | MS.gene26175:intron | 45.0% | |
| AACATCTCAAGAGGGGACAT+AGG | + | chr5.4:57524803-57524822 | None:intergenic | 45.0% | |
| AAGAGGAGATCTTCAATGGC+AGG | + | chr5.4:57523757-57523776 | None:intergenic | 45.0% | |
| AAGGATTGGGGGTTTGAGAA+AGG | - | chr5.4:57522005-57522024 | MS.gene26175:intron | 45.0% | |
| ACGGTCCTCACTTTACAAAC+CGG | - | chr5.4:57524091-57524110 | MS.gene26175:CDS | 45.0% | |
| AGAAAGGAATCTTGCGCCAA+TGG | - | chr5.4:57522820-57522839 | MS.gene26175:CDS | 45.0% | |
| AGAAGCCACCAACTATGACA+AGG | + | chr5.4:57524353-57524372 | None:intergenic | 45.0% | |
| AGAGGAGATCTTCAATGGCA+GGG | + | chr5.4:57523756-57523775 | None:intergenic | 45.0% | |
| AGATAATGCAGGAAGGGTGA+AGG | - | chr5.4:57522034-57522053 | MS.gene26175:intron | 45.0% | |
| AGGCCTATCTGATTCAATGC+GGG | + | chr5.4:57524048-57524067 | None:intergenic | 45.0% | |
| AGTACCTAGAGAAAGGGAGA+AGG | - | chr5.4:57520393-57520412 | MS.gene26175:intron | 45.0% | |
| AGTCCCGCATTGAATCAGAT+AGG | - | chr5.4:57524042-57524061 | MS.gene26175:CDS | 45.0% | |
| ATGGGGAGATAATGCAGGAA+GGG | - | chr5.4:57522028-57522047 | MS.gene26175:intron | 45.0% | |
| ATTGGACCAAGTCAAGGCTT+TGG | - | chr5.4:57522544-57522563 | MS.gene26175:CDS | 45.0% | |
| ATTGGGGGTTTGAGAAAGGA+TGG | - | chr5.4:57522009-57522028 | MS.gene26175:intron | 45.0% | |
| ATTTCCAGGTTCACAGGATC+CGG | + | chr5.4:57522095-57522114 | None:intergenic | 45.0% | |
| CAGACTGATCGATATCGCAA+CGG | - | chr5.4:57524480-57524499 | MS.gene26175:CDS | 45.0% | |
| CAGGCCTATCTGATTCAATG+CGG | + | chr5.4:57524049-57524068 | None:intergenic | 45.0% | |
| CATCAGAAACCAAGATGTCG+TGG | - | chr5.4:57522373-57522392 | MS.gene26175:intron | 45.0% | |
| CATGCTGCATTTACTCTTCC+AGG | - | chr5.4:57523607-57523626 | MS.gene26175:CDS | 45.0% | |
| CTACTCTGCTTCAATGCATC+AGG | + | chr5.4:57520347-57520366 | None:intergenic | 45.0% | |
| CTCCAACACATACCTTGAAG+CGG | - | chr5.4:57520297-57520316 | MS.gene26175:intron | 45.0% | |
| CTCCATTGAGAGGATCAATG+TGG | + | chr5.4:57524671-57524690 | None:intergenic | 45.0% | |
| CTCTCAAACAACAAGGCTCT+AGG | - | chr5.4:57525266-57525285 | MS.gene26175:intron | 45.0% | |
| CTTCTTCCAAAGCCTTGACT+TGG | + | chr5.4:57522553-57522572 | None:intergenic | 45.0% | |
| GAAAGGAATCTTGCGCCAAT+GGG | - | chr5.4:57522821-57522840 | MS.gene26175:CDS | 45.0% | |
| GATGAACCTCCAAAACCAGT+TGG | - | chr5.4:57525232-57525251 | MS.gene26175:intron | 45.0% | |
| GCATGACTTTCATACTGTCC+TGG | + | chr5.4:57523592-57523611 | None:intergenic | 45.0% | |
| GCGATTGTCAAGTCTGTGTA+TGG | + | chr5.4:57525549-57525568 | None:intergenic | 45.0% | |
| GGACAAGGAAACATCTCAAG+AGG | + | chr5.4:57524812-57524831 | None:intergenic | 45.0% | |
| GGAGGTTCATCACTTGGAAT+AGG | + | chr5.4:57525223-57525242 | None:intergenic | 45.0% | |
| GTATGTATGTGTCAACTCGG+AGG | - | chr5.4:57520824-57520843 | MS.gene26175:intron | 45.0% | |
| GTGAACCTTGTCATAGTTGG+TGG | - | chr5.4:57524345-57524364 | MS.gene26175:intron | 45.0% | |
| GTGGATATCTAGCAGAGAAG+AGG | - | chr5.4:57524226-57524245 | MS.gene26175:intron | 45.0% | |
| TACTCTTCCAGGGCTATGTA+GGG | - | chr5.4:57523618-57523637 | MS.gene26175:CDS | 45.0% | |
| TAGATACTTTGATCGGCACC+AGG | + | chr5.4:57523691-57523710 | None:intergenic | 45.0% | |
| TCACAATGCTATAGGGATCG+TGG | + | chr5.4:57522298-57522317 | None:intergenic | 45.0% | |
| TGATAGCTTCAAACTCCTGG+TGG | + | chr5.4:57522755-57522774 | None:intergenic | 45.0% | |
| TGATCCTTCTCCCTTTCTCT+AGG | + | chr5.4:57520400-57520419 | None:intergenic | 45.0% | |
| TGTCAAACACAGACACGTGT+TGG | - | chr5.4:57525637-57525656 | MS.gene26175:intron | 45.0% | |
| TGTGGTGCATATGAACTTGC+AGG | - | chr5.4:57520740-57520759 | MS.gene26175:intron | 45.0% | |
| TTACTCTTCCAGGGCTATGT+AGG | - | chr5.4:57523617-57523636 | MS.gene26175:CDS | 45.0% | |
| TTGGGGGTTTGAGAAAGGAT+GGG | - | chr5.4:57522010-57522029 | MS.gene26175:intron | 45.0% | |
| TTTGGGCAAGCAGATGTTCT+TGG | - | chr5.4:57522173-57522192 | MS.gene26175:intron | 45.0% | |
| ! | AGATGTCTAGTCTTCGCATG+AGG | - | chr5.4:57524012-57524031 | MS.gene26175:CDS | 45.0% |
| ! | CAATGTGGATTGTGAACGTC+TGG | + | chr5.4:57525806-57525825 | None:intergenic | 45.0% |
| ! | GATGTCTAGTCTTCGCATGA+GGG | - | chr5.4:57524013-57524032 | MS.gene26175:CDS | 45.0% |
| ! | GGATGCAGCAACCAAGATTT+TGG | - | chr5.4:57523077-57523096 | MS.gene26175:CDS | 45.0% |
| ! | GGCAAAAGCACAGACTATAG+TGG | - | chr5.4:57521492-57521511 | MS.gene26175:CDS | 45.0% |
| ! | GGCTATGTAGGGTTGTTTCA+GGG | - | chr5.4:57523629-57523648 | MS.gene26175:CDS | 45.0% |
| ! | GGGAAGCCAGATCTTGTTAT+TGG | - | chr5.4:57523111-57523130 | MS.gene26175:CDS | 45.0% |
| ! | TGGGGAACACTTACACCTTT+TGG | - | chr5.4:57524996-57525015 | MS.gene26175:intron | 45.0% |
| ! | TTTCCAGGTTGAAGGATTGG+GGG | - | chr5.4:57521994-57522013 | MS.gene26175:intron | 45.0% |
| !! | AATGTGTTGGACTAGTGGTG+GGG | + | chr5.4:57520650-57520669 | None:intergenic | 45.0% |
| !! | AGCGGGTTAGTTGAATGGTA+TGG | - | chr5.4:57524297-57524316 | MS.gene26175:intron | 45.0% |
| !! | AGGTTGATACCTGATGCTAG+AGG | - | chr5.4:57522720-57522739 | MS.gene26175:intron | 45.0% |
| !! | ATCAGAAGTACTCCAAGCTC+CGG | - | chr5.4:57522073-57522092 | MS.gene26175:intron | 45.0% |
| !! | CAATGTGTTGGACTAGTGGT+GGG | + | chr5.4:57520651-57520670 | None:intergenic | 45.0% |
| !! | CGATGCATTGCTGACTCAAA+GGG | - | chr5.4:57524513-57524532 | MS.gene26175:CDS | 45.0% |
| !! | CGGTTTTGTAGGGTTGAGTT+AGG | - | chr5.4:57524111-57524130 | MS.gene26175:CDS | 45.0% |
| !! | GAGCCTTGTTGTTTGAGAGT+TGG | + | chr5.4:57525265-57525284 | None:intergenic | 45.0% |
| !! | TCAATGTGTTGGACTAGTGG+TGG | + | chr5.4:57520652-57520671 | None:intergenic | 45.0% |
| !! | TCGATGCATTGCTGACTCAA+AGG | - | chr5.4:57524512-57524531 | MS.gene26175:CDS | 45.0% |
| !!! | GGTTTTGGAGGTTCATCACT+TGG | + | chr5.4:57525229-57525248 | None:intergenic | 45.0% |
| !! | AAAATAAAATAAAATTAAAG+GGG | + | chr5.4:57524847-57524866 | None:intergenic | 5.0% |
| AAACCCCCAATCCTTCAACC+TGG | + | chr5.4:57522000-57522019 | None:intergenic | 50.0% | |
| AAAGTCTTGCGGCTGCGATT+TGG | + | chr5.4:57522400-57522419 | None:intergenic | 50.0% | |
| AAGTCTTGCGGCTGCGATTT+GGG | + | chr5.4:57522399-57522418 | None:intergenic | 50.0% | |
| CACTTGGTTCCTCTAGCATC+AGG | + | chr5.4:57522732-57522751 | None:intergenic | 50.0% | |
| CATACATACTCCCAGACTCC+TGG | + | chr5.4:57520813-57520832 | None:intergenic | 50.0% | |
| CATCTATAGCGTGACCTGAG+TGG | + | chr5.4:57523997-57524016 | None:intergenic | 50.0% | |
| GAAACAACCCTACATAGCCC+TGG | + | chr5.4:57523628-57523647 | None:intergenic | 50.0% | |
| GATGGGGAGATAATGCAGGA+AGG | - | chr5.4:57522027-57522046 | MS.gene26175:intron | 50.0% | |
| GTCCGCTTCAAGGTATGTGT+TGG | + | chr5.4:57520302-57520321 | None:intergenic | 50.0% | |
| TACTCCCAGACTCCTGGATT+TGG | + | chr5.4:57520807-57520826 | None:intergenic | 50.0% | |
| TAGGCCAAATCCAGGAGTCT+GGG | - | chr5.4:57520800-57520819 | MS.gene26175:intron | 50.0% | |
| TGGGGGTTTGAGAAAGGATG+GGG | - | chr5.4:57522011-57522030 | MS.gene26175:intron | 50.0% | |
| TTAGGCCAAATCCAGGAGTC+TGG | - | chr5.4:57520799-57520818 | MS.gene26175:intron | 50.0% | |
| TTCAAACTCCTGGTGGCACT+TGG | + | chr5.4:57522748-57522767 | None:intergenic | 50.0% | |
| ! | AGAGTTGGTTGCTTGCCAAC+TGG | + | chr5.4:57525250-57525269 | None:intergenic | 50.0% |
| ! | ATGCGTTTGTAAGTGGCGGA+CGG | - | chr5.4:57524072-57524091 | MS.gene26175:CDS | 50.0% |
| ! | GATCTGGCTTCCCTTCCATT+AGG | + | chr5.4:57523104-57523123 | None:intergenic | 50.0% |
| ! | GGGCTATGTAGGGTTGTTTC+AGG | - | chr5.4:57523628-57523647 | MS.gene26175:CDS | 50.0% |
| !! | GAAAGAGCGCTTGTTAGGAG+AGG | - | chr5.4:57521121-57521140 | MS.gene26175:intron | 50.0% |
| !! | GGTTGCTTGCCAACTGGTTT+TGG | + | chr5.4:57525244-57525263 | None:intergenic | 50.0% |
| !!! | TGCTTGCCAACTGGTTTTGG+AGG | + | chr5.4:57525241-57525260 | None:intergenic | 50.0% |
| AAGATCCAATCGGGCCACTC+AGG | - | chr5.4:57523980-57523999 | MS.gene26175:intron | 55.0% | |
| CTCGGCTGCAAAGCTTCAGA+TGG | - | chr5.4:57521678-57521697 | MS.gene26175:CDS | 55.0% | |
| GGGTGATAGCCTCAACAGAG+AGG | + | chr5.4:57520851-57520870 | None:intergenic | 55.0% | |
| TAGAGGAACCAAGTGCCACC+AGG | - | chr5.4:57522737-57522756 | MS.gene26175:intron | 55.0% | |
| TGGAACGTGATTTCTGCGGC+CGG | - | chr5.4:57524750-57524769 | MS.gene26175:CDS | 55.0% | |
| TGTCGAAGCGAGACACCCAT+TGG | + | chr5.4:57522839-57522858 | None:intergenic | 55.0% | |
| TTTACCTGGCCACCAGTGTC+TGG | + | chr5.4:57522203-57522222 | None:intergenic | 55.0% | |
| ! | CGATTTGGGCCACGACATCT+TGG | + | chr5.4:57522385-57522404 | None:intergenic | 55.0% |
| ! | GACTAGTGGTGGGGATCAAG+GGG | + | chr5.4:57520641-57520660 | None:intergenic | 55.0% |
| ! | GGACTAGTGGTGGGGATCAA+GGG | + | chr5.4:57520642-57520661 | None:intergenic | 55.0% |
| !! | GTTCTTGGCTTGCCAGACAC+TGG | - | chr5.4:57522188-57522207 | MS.gene26175:intron | 55.0% |
| !! | TGGACTAGTGGTGGGGATCA+AGG | + | chr5.4:57520643-57520662 | None:intergenic | 55.0% |
| AGCTCCGGATCCTGTGAACC+TGG | - | chr5.4:57522088-57522107 | MS.gene26175:intron | 60.0% | |
| CTCGGAGGACCTCTCTGTTG+AGG | - | chr5.4:57520839-57520858 | MS.gene26175:intron | 60.0% | |
| GGTTCACAGGATCCGGAGCT+TGG | + | chr5.4:57522088-57522107 | None:intergenic | 60.0% | |
| !! | CTTGGCTTGCCAGACACTGG+TGG | - | chr5.4:57522191-57522210 | MS.gene26175:intron | 60.0% |
| CGTGACCTGAGTGGCCCGAT+TGG | + | chr5.4:57523988-57524007 | None:intergenic | 65.0% | |
| CTTGCCAGACACTGGTGGCC+AGG | - | chr5.4:57522196-57522215 | MS.gene26175:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 57520293 | 57525935 | 57520293 | ID=MS.gene26175 |
| chr5.4 | mRNA | 57520293 | 57525935 | 57520293 | ID=MS.gene26175.t1;Parent=MS.gene26175 |
| chr5.4 | exon | 57525702 | 57525935 | 57525702 | ID=MS.gene26175.t1.exon1;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57525702 | 57525935 | 57525702 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57525312 | 57525466 | 57525312 | ID=MS.gene26175.t1.exon2;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57525312 | 57525466 | 57525312 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57524682 | 57524874 | 57524682 | ID=MS.gene26175.t1.exon3;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57524682 | 57524874 | 57524682 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57524458 | 57524576 | 57524458 | ID=MS.gene26175.t1.exon4;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57524458 | 57524576 | 57524458 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57524011 | 57524227 | 57524011 | ID=MS.gene26175.t1.exon5;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57524011 | 57524227 | 57524011 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57523600 | 57523695 | 57523600 | ID=MS.gene26175.t1.exon6;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57523600 | 57523695 | 57523600 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57523341 | 57523514 | 57523341 | ID=MS.gene26175.t1.exon7;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57523341 | 57523514 | 57523341 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57523034 | 57523150 | 57523034 | ID=MS.gene26175.t1.exon8;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57523034 | 57523150 | 57523034 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57522757 | 57522923 | 57522757 | ID=MS.gene26175.t1.exon9;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57522757 | 57522923 | 57522757 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57522425 | 57522649 | 57522425 | ID=MS.gene26175.t1.exon10;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57522425 | 57522649 | 57522425 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57521435 | 57522001 | 57521435 | ID=MS.gene26175.t1.exon11;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57521435 | 57522001 | 57521435 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57521132 | 57521270 | 57521132 | ID=MS.gene26175.t1.exon12;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57521132 | 57521270 | 57521132 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57520941 | 57521020 | 57520941 | ID=MS.gene26175.t1.exon13;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57520941 | 57521020 | 57520941 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57520398 | 57520427 | 57520398 | ID=MS.gene26175.t1.exon14;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57520398 | 57520427 | 57520398 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| chr5.4 | exon | 57520293 | 57520311 | 57520293 | ID=MS.gene26175.t1.exon15;Parent=MS.gene26175.t1 |
| chr5.4 | CDS | 57520293 | 57520311 | 57520293 | ID=cds.MS.gene26175.t1;Parent=MS.gene26175.t1 |
| Gene Sequence |
| Protein sequence |
