Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26248.t1 | XP_003616047.1 | 99.7 | 321 | 1 | 0 | 1 | 321 | 1 | 321 | 5.50E-182 | 646.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26248.t1 | Q680A5 | 80.6 | 314 | 60 | 1 | 8 | 321 | 25 | 337 | 3.8e-147 | 522.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26248.t1 | G7K0V0 | 99.7 | 321 | 1 | 0 | 1 | 321 | 1 | 321 | 4.0e-182 | 646.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055573 | MS.gene26248 | 0.815521 | 8.86E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26248.t1 | MTR_5g075540 | 99.688 | 321 | 1 | 0 | 1 | 321 | 1 | 321 | 0.0 | 662 |
| MS.gene26248.t1 | MTR_5g033300 | 72.293 | 314 | 85 | 2 | 9 | 321 | 89 | 401 | 7.04e-163 | 460 |
| MS.gene26248.t1 | MTR_5g033300 | 64.650 | 314 | 77 | 3 | 9 | 321 | 89 | 369 | 7.70e-136 | 390 |
| MS.gene26248.t1 | MTR_6g007707 | 56.566 | 99 | 38 | 2 | 50 | 147 | 8 | 102 | 3.11e-28 | 105 |
| MS.gene26248.t1 | MTR_4g098820 | 26.102 | 295 | 194 | 11 | 11 | 298 | 94 | 371 | 1.10e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26248.t1 | AT2G42910 | 80.573 | 314 | 60 | 1 | 8 | 321 | 25 | 337 | 0.0 | 533 |
| MS.gene26248.t1 | AT1G10700 | 71.203 | 316 | 85 | 3 | 9 | 321 | 99 | 411 | 2.51e-166 | 469 |
| MS.gene26248.t1 | AT1G10700 | 71.875 | 192 | 53 | 1 | 9 | 200 | 99 | 289 | 4.22e-99 | 294 |
| MS.gene26248.t1 | AT2G44530 | 27.431 | 288 | 183 | 12 | 33 | 312 | 98 | 367 | 1.87e-15 | 77.0 |
| MS.gene26248.t1 | AT2G44530 | 27.431 | 288 | 183 | 12 | 33 | 312 | 97 | 366 | 2.02e-15 | 76.6 |
| MS.gene26248.t1 | AT2G35390 | 26.766 | 269 | 179 | 10 | 4 | 265 | 86 | 343 | 3.29e-14 | 72.8 |
| MS.gene26248.t1 | AT2G35390 | 26.259 | 278 | 187 | 10 | 4 | 274 | 35 | 301 | 3.69e-14 | 72.8 |
| MS.gene26248.t1 | AT2G35390 | 26.259 | 278 | 187 | 10 | 4 | 274 | 35 | 301 | 3.69e-14 | 72.8 |
| MS.gene26248.t1 | AT2G35390 | 26.766 | 269 | 179 | 10 | 4 | 265 | 86 | 343 | 3.90e-14 | 72.8 |
| MS.gene26248.t1 | AT1G32380 | 24.908 | 273 | 183 | 10 | 33 | 298 | 2 | 259 | 4.85e-13 | 68.9 |
| MS.gene26248.t1 | AT1G32380 | 25.000 | 272 | 182 | 10 | 34 | 298 | 111 | 367 | 8.31e-13 | 68.9 |
Find 71 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGTTATTTATAAATATATT+TGG | 0.186047 | 5.4:-58771369 | None:intergenic |
| GTTGGGCCACCTCTTGAAAT+TGG | 0.235056 | 5.4:-58771609 | None:intergenic |
| AGTTTACCTGACACTCAATT+AGG | 0.236042 | 5.4:-58773431 | None:intergenic |
| GCCAGAGCTTTGACTGTAAC+TGG | 0.254674 | 5.4:-58774245 | None:intergenic |
| AGAAGGCATTTGCCTACTTT+TGG | 0.262156 | 5.4:+58774207 | MS.gene26248:CDS |
| GTTGATGATTTAGTCCAATC+TGG | 0.298173 | 5.4:+58773402 | MS.gene26248:CDS |
| CGCTTCCATGCACCATCATC+TGG | 0.347826 | 5.4:-58773198 | None:intergenic |
| GTTGTAGCAGACGTTGCTTT+AGG | 0.373616 | 5.4:-58772050 | None:intergenic |
| AGAGCTGAATGATGCCAAAA+AGG | 0.389793 | 5.4:-58771418 | None:intergenic |
| GTTTACCTGACACTCAATTA+GGG | 0.394592 | 5.4:-58773430 | None:intergenic |
| AATCGCAGCCATGATTGGTT+AGG | 0.407083 | 5.4:-58774073 | None:intergenic |
| TTGCAAGTTCTTCACAATCA+AGG | 0.418746 | 5.4:-58770056 | None:intergenic |
| GTCATTGCATTTCCAGATGA+TGG | 0.424723 | 5.4:+58773186 | MS.gene26248:CDS |
| TTTGAAGTATTGAGTCTAGC+AGG | 0.437700 | 5.4:+58774281 | MS.gene26248:CDS |
| TCATATATGACTAAACTAGT+TGG | 0.456462 | 5.4:-58771627 | None:intergenic |
| TGCAAGTTCTTCACAATCAA+GGG | 0.457166 | 5.4:-58770055 | None:intergenic |
| GGGCACCCTAATTGAGTGTC+AGG | 0.460843 | 5.4:+58773425 | MS.gene26248:CDS |
| TTGATGATTTAGTCCAATCT+GGG | 0.464717 | 5.4:+58773403 | MS.gene26248:CDS |
| CTCAAGGAAGGTCATGTCTC+TGG | 0.466819 | 5.4:+58773363 | MS.gene26248:CDS |
| ATTTGTTGCTTCTTTCACAT+TGG | 0.469191 | 5.4:+58771491 | MS.gene26248:CDS |
| ATACTCACATTATCAGCATC+AGG | 0.471492 | 5.4:-58772075 | None:intergenic |
| AATGATCCAGTTGGGAAGAA+AGG | 0.473072 | 5.4:-58771519 | None:intergenic |
| AGTTGTTCAAACACTTGAGC+TGG | 0.480569 | 5.4:-58771441 | None:intergenic |
| GCTAGACTCAATACTTCAAA+AGG | 0.480610 | 5.4:-58774278 | None:intergenic |
| AATAATTGTCGAACAACTTG+TGG | 0.483377 | 5.4:-58773224 | None:intergenic |
| CATATATGACTAAACTAGTT+GGG | 0.489811 | 5.4:-58771626 | None:intergenic |
| ATATGACATTCATGCCCTGC+AGG | 0.491592 | 5.4:+58771644 | MS.gene26248:CDS |
| TCACTCTTCAGAATATCAAA+TGG | 0.496186 | 5.4:+58770109 | MS.gene26248:CDS |
| AACTGGATCATTTGAGCGAA+TGG | 0.500509 | 5.4:+58771530 | MS.gene26248:CDS |
| CCCAGTTACAGTCAAAGCTC+TGG | 0.506982 | 5.4:+58774244 | MS.gene26248:CDS |
| GCGTGTTCCCTAACCAATCA+TGG | 0.517336 | 5.4:+58774065 | MS.gene26248:CDS |
| TTCGCTCAAATGATCCAGTT+GGG | 0.520965 | 5.4:-58771527 | None:intergenic |
| AAGGTGACAAGAGGATAGTT+CGG | 0.530143 | 5.4:+58773340 | MS.gene26248:CDS |
| ATCGCAGCCATGATTGGTTA+GGG | 0.531280 | 5.4:-58774072 | None:intergenic |
| AGAAAAGAGAAGAATGGCAA+TGG | 0.531717 | 5.4:+58769996 | None:intergenic |
| TTTGAGCGAATGGAAGAAGA+AGG | 0.532177 | 5.4:+58771540 | MS.gene26248:CDS |
| CTGCGATTCACTCACAAAGA+TGG | 0.535799 | 5.4:+58774088 | MS.gene26248:CDS |
| AATATTCCAATTTCAAGAGG+TGG | 0.547449 | 5.4:+58771603 | MS.gene26248:CDS |
| ATTCGCTCAAATGATCCAGT+TGG | 0.550408 | 5.4:-58771528 | None:intergenic |
| TCAAATATTCCAATTTCAAG+AGG | 0.551790 | 5.4:+58771600 | MS.gene26248:CDS |
| GAGTGAATCGCAGCCATGAT+TGG | 0.557799 | 5.4:-58774078 | None:intergenic |
| GAACACGCCATGTGTGACAT+AGG | 0.557969 | 5.4:-58774050 | None:intergenic |
| CCAGAGCTTTGACTGTAACT+GGG | 0.567033 | 5.4:-58774244 | None:intergenic |
| AGAATCTGTGATCCAAAAGT+AGG | 0.570262 | 5.4:-58774219 | None:intergenic |
| CAACATCCGTGCAAGGGTGA+AGG | 0.572743 | 5.4:-58771577 | None:intergenic |
| AGGATAGTTCGGCTCAAGGA+AGG | 0.572954 | 5.4:+58773351 | MS.gene26248:CDS |
| AAATATATTTGGAAACCCAT+CGG | 0.573432 | 5.4:-58771358 | None:intergenic |
| CAACTGCCTTCACCCTTGCA+CGG | 0.575482 | 5.4:+58771571 | MS.gene26248:CDS |
| TTGAAGTATTGAGTCTAGCA+GGG | 0.577295 | 5.4:+58774282 | MS.gene26248:CDS |
| TTGAGCGAATGGAAGAAGAA+GGG | 0.584772 | 5.4:+58771541 | MS.gene26248:CDS |
| CAAGAGGATAGTTCGGCTCA+AGG | 0.585535 | 5.4:+58773347 | MS.gene26248:CDS |
| TATTTGACAACATCCGTGCA+AGG | 0.586552 | 5.4:-58771584 | None:intergenic |
| CATTTCCAGATGATGGTGCA+TGG | 0.590118 | 5.4:+58773193 | MS.gene26248:CDS |
| AGCAGACGTTGCTTTAGGAG+AGG | 0.593619 | 5.4:-58772045 | None:intergenic |
| GTTGTTCGACAATTATTCAG+TGG | 0.594555 | 5.4:+58773230 | MS.gene26248:CDS |
| GGAATACCAGTCTCAAACAA+TGG | 0.599758 | 5.4:-58772024 | None:intergenic |
| TGAGCGAATGGAAGAAGAAG+GGG | 0.613969 | 5.4:+58771542 | MS.gene26248:CDS |
| CATTAAAACACAAACCTGCA+GGG | 0.622993 | 5.4:-58771658 | None:intergenic |
| ACTTGCAGAAGCCTCAGAGA+AGG | 0.630105 | 5.4:+58774190 | MS.gene26248:intron |
| ATTTGACAACATCCGTGCAA+GGG | 0.634805 | 5.4:-58771583 | None:intergenic |
| TGATGATTTAGTCCAATCTG+GGG | 0.642420 | 5.4:+58773404 | MS.gene26248:CDS |
| AGGTACGTGAAGGTGACAAG+AGG | 0.654440 | 5.4:+58773331 | MS.gene26248:CDS |
| GTGAGTGCCTATGTCACACA+TGG | 0.667765 | 5.4:+58774043 | MS.gene26248:CDS |
| GATGATTTAGTCCAATCTGG+GGG | 0.670939 | 5.4:+58773405 | MS.gene26248:CDS |
| GTATGCACAAAGGTACGTGA+AGG | 0.671287 | 5.4:+58773321 | MS.gene26248:CDS |
| CTCTTCAGAATATCAAATGG+AGG | 0.672816 | 5.4:+58770112 | MS.gene26248:CDS |
| GTAGGCAAATGCCTTCTCTG+AGG | 0.680450 | 5.4:-58774201 | None:intergenic |
| AAAGAAGCAACAAATAGACG+AGG | 0.695963 | 5.4:-58771483 | None:intergenic |
| GTGGCAGGTTGTATGCACAA+AGG | 0.717387 | 5.4:+58773311 | MS.gene26248:intron |
| AAGAAGCAACAAATAGACGA+GGG | 0.724453 | 5.4:-58771482 | None:intergenic |
| AATAACGCAGAAGAGCTCAG+AGG | 0.761164 | 5.4:+58771384 | MS.gene26248:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAATTAAAAATGAAAA+CGG | - | chr5.4:58773709-58773728 | None:intergenic | 10.0% |
| !!! | AATTTATTATTTTTATGATC+AGG | + | chr5.4:58773161-58773180 | MS.gene26248:intron | 10.0% |
| !!! | ATTATATTTTTATACATGTT+TGG | + | chr5.4:58770169-58770188 | MS.gene26248:intron | 10.0% |
| !!! | ATTGTTTTAAATTTTAAGAA+AGG | - | chr5.4:58772119-58772138 | None:intergenic | 10.0% |
| !! | AATATTTGTACAAAAAACAT+TGG | + | chr5.4:58773761-58773780 | MS.gene26248:intron | 15.0% |
| !! | GAAAAAAGAAAAAAAAAACA+AGG | - | chr5.4:58773027-58773046 | None:intergenic | 15.0% |
| !! | GCGTTATTTATAAATATATT+TGG | - | chr5.4:58771372-58771391 | None:intergenic | 15.0% |
| !! | GTAATTGATTAATTAAAAGT+TGG | + | chr5.4:58773854-58773873 | MS.gene26248:intron | 15.0% |
| !! | TAAATAGAGTGAAAATAAAA+TGG | + | chr5.4:58773832-58773851 | MS.gene26248:intron | 15.0% |
| !! | TTGTAATTAAAAATGAAAAC+GGG | - | chr5.4:58773708-58773727 | None:intergenic | 15.0% |
| !!! | ATTTAAAACAATGTACTTTT+TGG | + | chr5.4:58772127-58772146 | MS.gene26248:intron | 15.0% |
| !!! | TTTAAAACAATGTACTTTTT+GGG | + | chr5.4:58772128-58772147 | MS.gene26248:intron | 15.0% |
| !!! | TTTATAGTTGTCTAATTTTT+GGG | + | chr5.4:58773287-58773306 | MS.gene26248:intron | 15.0% |
| !! | AAAATCATGAGAATACAATT+CGG | - | chr5.4:58771107-58771126 | None:intergenic | 20.0% |
| !! | AATGACATAACTTAAGAAAT+TGG | - | chr5.4:58771177-58771196 | None:intergenic | 20.0% |
| !! | ACAAAAAAACTATTCCAATT+TGG | - | chr5.4:58771289-58771308 | None:intergenic | 20.0% |
| !! | ACATTACAAACAAACAAATT+AGG | + | chr5.4:58771261-58771280 | MS.gene26248:intron | 20.0% |
| !! | ATTAAATACATAGATCCTTA+TGG | - | chr5.4:58773264-58773283 | None:intergenic | 20.0% |
| !! | TTAAATACATAGATCCTTAT+GGG | - | chr5.4:58773263-58773282 | None:intergenic | 20.0% |
| !! | TTTATCACAACCAATATATA+AGG | - | chr5.4:58770556-58770575 | None:intergenic | 20.0% |
| !!! | AAAATATAATCTTTTCCACA+AGG | - | chr5.4:58770159-58770178 | None:intergenic | 20.0% |
| !!! | AAATATAATCTTTTCCACAA+GGG | - | chr5.4:58770158-58770177 | None:intergenic | 20.0% |
| !!! | GTTTATAGTTGTCTAATTTT+TGG | + | chr5.4:58773286-58773305 | MS.gene26248:intron | 20.0% |
| !!! | TAGAAACTTATTGAGTTTTA+GGG | + | chr5.4:58771886-58771905 | MS.gene26248:intron | 20.0% |
| !!! | TTTCTAAAATAGTTCTTCAA+GGG | + | chr5.4:58770529-58770548 | MS.gene26248:intron | 20.0% |
| !!! | TTTTCTAAAATAGTTCTTCA+AGG | + | chr5.4:58770528-58770547 | MS.gene26248:intron | 20.0% |
| !!! | TTTTTATTTGTGATGGTTTT+GGG | + | chr5.4:58772949-58772968 | MS.gene26248:intron | 20.0% |
| !!! | TTTTTTATTTGTGATGGTTT+TGG | + | chr5.4:58772948-58772967 | MS.gene26248:intron | 20.0% |
| ! | AAACAAATTAGGAACCAAAT+TGG | + | chr5.4:58771272-58771291 | MS.gene26248:intron | 25.0% |
| ! | AAATAATAAATTAAGGCTGC+AGG | - | chr5.4:58773153-58773172 | None:intergenic | 25.0% |
| ! | AAATAATCATAGGATTTGCA+AGG | + | chr5.4:58770840-58770859 | MS.gene26248:intron | 25.0% |
| ! | AAATATATTTGGAAACCCAT+CGG | - | chr5.4:58771361-58771380 | None:intergenic | 25.0% |
| ! | AACCATCACAAATAAAAAAC+CGG | - | chr5.4:58772947-58772966 | None:intergenic | 25.0% |
| ! | ATACAACAAGATGATATACT+TGG | - | chr5.4:58770285-58770304 | None:intergenic | 25.0% |
| ! | ATATTCAATAGCAATTCATG+AGG | - | chr5.4:58771740-58771759 | None:intergenic | 25.0% |
| ! | ATCCAAGTCGTAATTAAAAA+TGG | - | chr5.4:58773581-58773600 | None:intergenic | 25.0% |
| ! | ATTTGCAACATGCAATATAA+AGG | + | chr5.4:58770678-58770697 | MS.gene26248:intron | 25.0% |
| ! | CATATATGACTAAACTAGTT+GGG | - | chr5.4:58771629-58771648 | None:intergenic | 25.0% |
| ! | CTAATAATAACAAGTCAACT+AGG | - | chr5.4:58770225-58770244 | None:intergenic | 25.0% |
| ! | TAGATTCAAACTAAATCATG+AGG | + | chr5.4:58770711-58770730 | MS.gene26248:intron | 25.0% |
| ! | TATATTTATGTTACAGCTTG+TGG | - | chr5.4:58770309-58770328 | None:intergenic | 25.0% |
| ! | TCAAATATTCCAATTTCAAG+AGG | + | chr5.4:58771600-58771619 | MS.gene26248:CDS | 25.0% |
| ! | TCATATATGACTAAACTAGT+TGG | - | chr5.4:58771630-58771649 | None:intergenic | 25.0% |
| !! | ACACTGCTTTAAATAATCAT+AGG | + | chr5.4:58770830-58770849 | MS.gene26248:intron | 25.0% |
| !! | ATTAAGTACACTTTTCTTAC+TGG | + | chr5.4:58770334-58770353 | MS.gene26248:intron | 25.0% |
| !! | CTAATGATTTGAAATTATGC+AGG | + | chr5.4:58771972-58771991 | MS.gene26248:intron | 25.0% |
| !! | GTAGAAACTTATTGAGTTTT+AGG | + | chr5.4:58771885-58771904 | MS.gene26248:intron | 25.0% |
| !! | GTGTTTATATGGAAGATTTT+AGG | - | chr5.4:58770923-58770942 | None:intergenic | 25.0% |
| !! | GTTTTTGACCAAATTGATAA+CGG | + | chr5.4:58771307-58771326 | MS.gene26248:intron | 25.0% |
| !!! | AGAAACTTATTGAGTTTTAG+GGG | + | chr5.4:58771887-58771906 | MS.gene26248:intron | 25.0% |
| !!! | GAATTTTGTTTCACTGATAA+CGG | + | chr5.4:58773791-58773810 | MS.gene26248:intron | 25.0% |
| !!! | TGACTTGTTATTATTAGAGA+TGG | + | chr5.4:58770228-58770247 | MS.gene26248:intron | 25.0% |
| !!! | TTGTGTTTTAATGCATTCAA+AGG | + | chr5.4:58771668-58771687 | MS.gene26248:intron | 25.0% |
| !!! | TTTGGGTTGTTTTGATTTTA+AGG | + | chr5.4:58772966-58772985 | MS.gene26248:intron | 25.0% |
| AAAAAAGGCCGTTATCAATT+TGG | - | chr5.4:58771318-58771337 | None:intergenic | 30.0% | |
| AACAAGATGATATACTTGGA+CGG | - | chr5.4:58770281-58770300 | None:intergenic | 30.0% | |
| AATAATTGTCGAACAACTTG+TGG | - | chr5.4:58773227-58773246 | None:intergenic | 30.0% | |
| AATATTCCAATTTCAAGAGG+TGG | + | chr5.4:58771603-58771622 | MS.gene26248:CDS | 30.0% | |
| AGTAGCAATCTTAGTTATCT+TGG | + | chr5.4:58771146-58771165 | MS.gene26248:intron | 30.0% | |
| CAGACATATGCATTGAAAAT+AGG | - | chr5.4:58773952-58773971 | None:intergenic | 30.0% | |
| GATGTGCATATAGAGATTAA+GGG | - | chr5.4:58773921-58773940 | None:intergenic | 30.0% | |
| TATTTGAAAAAATCCGTCTC+CGG | + | chr5.4:58772301-58772320 | MS.gene26248:intron | 30.0% | |
| TCACTCTTCAGAATATCAAA+TGG | + | chr5.4:58770109-58770128 | MS.gene26248:CDS | 30.0% | |
| TGATGTGCATATAGAGATTA+AGG | - | chr5.4:58773922-58773941 | None:intergenic | 30.0% | |
| TGTAATGTTATACGTACAGA+TGG | - | chr5.4:58771249-58771268 | None:intergenic | 30.0% | |
| TTTAGTGATGACACTCTTTA+TGG | + | chr5.4:58770625-58770644 | MS.gene26248:intron | 30.0% | |
| TTTCATATCCTCCACAATTT+GGG | + | chr5.4:58771199-58771218 | MS.gene26248:intron | 30.0% | |
| ! | ATTTGTTGCTTCTTTCACAT+TGG | + | chr5.4:58771491-58771510 | MS.gene26248:CDS | 30.0% |
| ! | CTAGCTATTTGAAACTTGAA+CGG | + | chr5.4:58772225-58772244 | MS.gene26248:intron | 30.0% |
| ! | TCATGAGGCATTCATAAAAT+AGG | + | chr5.4:58770726-58770745 | MS.gene26248:intron | 30.0% |
| ! | TTGATGATTTAGTCCAATCT+GGG | + | chr5.4:58773403-58773422 | MS.gene26248:CDS | 30.0% |
| ! | TTTTCATATCCTCCACAATT+TGG | + | chr5.4:58771198-58771217 | MS.gene26248:intron | 30.0% |
| !! | AAAACAATGTACTTTTTGGG+TGG | + | chr5.4:58772131-58772150 | MS.gene26248:intron | 30.0% |
| !! | ATTAACAGAGGGGTATATTT+TGG | - | chr5.4:58772768-58772787 | None:intergenic | 30.0% |
| !! | GTATTTTTAAATGGCTACCA+TGG | - | chr5.4:58771025-58771044 | None:intergenic | 30.0% |
| !! | GTGTAGGCAGTATTTTTAAA+TGG | - | chr5.4:58771034-58771053 | None:intergenic | 30.0% |
| !!! | ATGTTTTATTTTTGTGCCAG+CGG | + | chr5.4:58772643-58772662 | MS.gene26248:intron | 30.0% |
| !!! | CACTTTTCTTACTGGTTTTA+TGG | + | chr5.4:58770342-58770361 | MS.gene26248:intron | 30.0% |
| !!! | TCTCAAGTGTTGCTTATTTT+CGG | - | chr5.4:58773536-58773555 | None:intergenic | 30.0% |
| !!! | TGCCATTTTTAATTACGACT+TGG | + | chr5.4:58773576-58773595 | MS.gene26248:intron | 30.0% |
| AAAGAAGCAACAAATAGACG+AGG | - | chr5.4:58771486-58771505 | None:intergenic | 35.0% | |
| AACAAACAACCAGATGAAGA+TGG | - | chr5.4:58771056-58771075 | None:intergenic | 35.0% | |
| AACACCCATAAAAGATTCCA+AGG | - | chr5.4:58772682-58772701 | None:intergenic | 35.0% | |
| AAGAAGCAACAAATAGACGA+GGG | - | chr5.4:58771485-58771504 | None:intergenic | 35.0% | |
| AAGCCACACAATAAAACTAG+CGG | - | chr5.4:58773054-58773073 | None:intergenic | 35.0% | |
| AAGTAAAGATCCCCAAATTG+TGG | - | chr5.4:58771213-58771232 | None:intergenic | 35.0% | |
| ACACCTAGATAAAAACCAAG+AGG | - | chr5.4:58772739-58772758 | None:intergenic | 35.0% | |
| ACATAAGAAATGACTGCTAC+AGG | - | chr5.4:58772868-58772887 | None:intergenic | 35.0% | |
| ACTTGAACGGTTATTAGTGT+TGG | + | chr5.4:58772238-58772257 | MS.gene26248:intron | 35.0% | |
| AGAATCTGTGATCCAAAAGT+AGG | - | chr5.4:58774222-58774241 | None:intergenic | 35.0% | |
| AGTTTACCTGACACTCAATT+AGG | - | chr5.4:58773434-58773453 | None:intergenic | 35.0% | |
| ATACTCACATTATCAGCATC+AGG | - | chr5.4:58772078-58772097 | None:intergenic | 35.0% | |
| CATAAGAAATGACTGCTACA+GGG | - | chr5.4:58772867-58772886 | None:intergenic | 35.0% | |
| CATTAAAACACAAACCTGCA+GGG | - | chr5.4:58771661-58771680 | None:intergenic | 35.0% | |
| CTAGATAAAAACCAAGAGGT+AGG | - | chr5.4:58772735-58772754 | None:intergenic | 35.0% | |
| CTCAGCAAAAACAAATAGTG+AGG | - | chr5.4:58772900-58772919 | None:intergenic | 35.0% | |
| CTCTTCAGAATATCAAATGG+AGG | + | chr5.4:58770112-58770131 | MS.gene26248:CDS | 35.0% | |
| CTTCAAGGGACCTTATATAT+TGG | + | chr5.4:58770543-58770562 | MS.gene26248:intron | 35.0% | |
| GACCTGGATAAGCATAAAAA+AGG | - | chr5.4:58771333-58771352 | None:intergenic | 35.0% | |
| GAGCTTAAATTCAGTAGTGT+AGG | + | chr5.4:58770756-58770775 | MS.gene26248:intron | 35.0% | |
| GATTGATCAAGTGAGACATA+TGG | + | chr5.4:58770375-58770394 | MS.gene26248:intron | 35.0% | |
| GCATACAATGATCATATGGT+GGG | + | chr5.4:58773634-58773653 | MS.gene26248:intron | 35.0% | |
| GCTAGACTCAATACTTCAAA+AGG | - | chr5.4:58774281-58774300 | None:intergenic | 35.0% | |
| GGGTGTTTCATTTACTTGTT+GGG | + | chr5.4:58772695-58772714 | MS.gene26248:intron | 35.0% | |
| GTTGTTCGACAATTATTCAG+TGG | + | chr5.4:58773230-58773249 | MS.gene26248:CDS | 35.0% | |
| GTTTACCTGACACTCAATTA+GGG | - | chr5.4:58773433-58773452 | None:intergenic | 35.0% | |
| TACAATTCGGACAAATGTCA+TGG | - | chr5.4:58771094-58771113 | None:intergenic | 35.0% | |
| TGAGATAGTAGAGGATATCA+AGG | + | chr5.4:58772387-58772406 | MS.gene26248:intron | 35.0% | |
| TGATCCATTAGTACCAAACA+TGG | + | chr5.4:58770409-58770428 | MS.gene26248:intron | 35.0% | |
| TGATGATTTAGTCCAATCTG+GGG | + | chr5.4:58773404-58773423 | MS.gene26248:CDS | 35.0% | |
| TGCAAGTTCTTCACAATCAA+GGG | - | chr5.4:58770058-58770077 | None:intergenic | 35.0% | |
| TGCATACAATGATCATATGG+TGG | + | chr5.4:58773633-58773652 | MS.gene26248:intron | 35.0% | |
| TGGGTGTTTCATTTACTTGT+TGG | + | chr5.4:58772694-58772713 | MS.gene26248:intron | 35.0% | |
| TTCATATCCTCCACAATTTG+GGG | + | chr5.4:58771200-58771219 | MS.gene26248:intron | 35.0% | |
| TTCGACAATTATTCAGTGGT+CGG | + | chr5.4:58773234-58773253 | MS.gene26248:intron | 35.0% | |
| TTGCAAGTTCTTCACAATCA+AGG | - | chr5.4:58770059-58770078 | None:intergenic | 35.0% | |
| TTGTGTAAAGAAACAGGGTA+AGG | + | chr5.4:58773609-58773628 | MS.gene26248:intron | 35.0% | |
| TTTCAGAAATGTGGTGAAAG+AGG | + | chr5.4:58772360-58772379 | MS.gene26248:intron | 35.0% | |
| ! | AAGAGATTGACATGCTTTTG+TGG | - | chr5.4:58770030-58770049 | None:intergenic | 35.0% |
| ! | AGGAACCTTGGAATCTTTTA+TGG | + | chr5.4:58772674-58772693 | MS.gene26248:intron | 35.0% |
| ! | ATTCCAAATTAGCCTGAATC+CGG | - | chr5.4:58772323-58772342 | None:intergenic | 35.0% |
| ! | CCACATTTCTGAAAACTCAA+TGG | - | chr5.4:58772354-58772373 | None:intergenic | 35.0% |
| ! | CCATTGAGTTTTCAGAAATG+TGG | + | chr5.4:58772351-58772370 | MS.gene26248:intron | 35.0% |
| ! | GATTTGAAATTATGCAGGAG+AGG | + | chr5.4:58771977-58771996 | MS.gene26248:intron | 35.0% |
| ! | GGAACCTTGGAATCTTTTAT+GGG | + | chr5.4:58772675-58772694 | MS.gene26248:intron | 35.0% |
| !! | AGTTGTCTAATTTTTGGGAG+TGG | + | chr5.4:58773292-58773311 | MS.gene26248:intron | 35.0% |
| !! | CTACCTCTTGGTTTTTATCT+AGG | + | chr5.4:58772733-58772752 | MS.gene26248:intron | 35.0% |
| !! | GAAGTTGATGAGATTAAGCT+AGG | - | chr5.4:58774119-58774138 | None:intergenic | 35.0% |
| !! | GTTGATGATTTAGTCCAATC+TGG | + | chr5.4:58773402-58773421 | MS.gene26248:CDS | 35.0% |
| !! | TTGAAGTATTGAGTCTAGCA+GGG | + | chr5.4:58774282-58774301 | MS.gene26248:CDS | 35.0% |
| !! | TTGACTTGCACATCATACAT+AGG | + | chr5.4:58771782-58771801 | MS.gene26248:intron | 35.0% |
| !! | TTTGAAGTATTGAGTCTAGC+AGG | + | chr5.4:58774281-58774300 | MS.gene26248:CDS | 35.0% |
| !!! | AAGTGTTGCTTATTTTCGGT+TGG | - | chr5.4:58773532-58773551 | None:intergenic | 35.0% |
| !!! | ATGCAGGAGAGGTTTTATTT+CGG | + | chr5.4:58771988-58772007 | MS.gene26248:intron | 35.0% |
| !!! | CTTATTGAGTTTTAGGGGTA+TGG | + | chr5.4:58771892-58771911 | MS.gene26248:intron | 35.0% |
| !!! | GATTTTTTTACAACCGTCAC+CGG | - | chr5.4:58770976-58770995 | None:intergenic | 35.0% |
| !!! | GTCCGGTTTTTTATTTGTGA+TGG | + | chr5.4:58772942-58772961 | MS.gene26248:intron | 35.0% |
| !!! | TATCCGCTAGTTTTATTGTG+TGG | + | chr5.4:58773048-58773067 | MS.gene26248:intron | 35.0% |
| AACTGGATCATTTGAGCGAA+TGG | + | chr5.4:58771530-58771549 | MS.gene26248:CDS | 40.0% | |
| AAGGTGACAAGAGGATAGTT+CGG | + | chr5.4:58773340-58773359 | MS.gene26248:CDS | 40.0% | |
| AATGATCCAGTTGGGAAGAA+AGG | - | chr5.4:58771522-58771541 | None:intergenic | 40.0% | |
| AATGATGCAATGCATGTCAG+TGG | + | chr5.4:58770804-58770823 | MS.gene26248:intron | 40.0% | |
| ACAATCAGTGTTGTCGATGA+TGG | + | chr5.4:58770876-58770895 | MS.gene26248:intron | 40.0% | |
| ACTAAAGCTCCTGCATACAT+AGG | - | chr5.4:58773674-58773693 | None:intergenic | 40.0% | |
| AGAGCTGAATGATGCCAAAA+AGG | - | chr5.4:58771421-58771440 | None:intergenic | 40.0% | |
| AGCCTCTTGTGTAAAGAAAC+AGG | + | chr5.4:58773603-58773622 | MS.gene26248:intron | 40.0% | |
| AGTTGTTCAAACACTTGAGC+TGG | - | chr5.4:58771444-58771463 | None:intergenic | 40.0% | |
| ATTCGCTCAAATGATCCAGT+TGG | - | chr5.4:58771531-58771550 | None:intergenic | 40.0% | |
| ATTTGACAACATCCGTGCAA+GGG | - | chr5.4:58771586-58771605 | None:intergenic | 40.0% | |
| CATGATTGGGTTTGTGCTTA+GGG | + | chr5.4:58772821-58772840 | MS.gene26248:intron | 40.0% | |
| CTAAAGCTCCTGCATACATA+GGG | - | chr5.4:58773673-58773692 | None:intergenic | 40.0% | |
| GAGTGTCATCACTAAAGACT+TGG | - | chr5.4:58770621-58770640 | None:intergenic | 40.0% | |
| GATGATTTAGTCCAATCTGG+GGG | + | chr5.4:58773405-58773424 | MS.gene26248:CDS | 40.0% | |
| GCATTAAAACACAAACCTGC+AGG | - | chr5.4:58771662-58771681 | None:intergenic | 40.0% | |
| GCCTCTTGTGTAAAGAAACA+GGG | + | chr5.4:58773604-58773623 | MS.gene26248:intron | 40.0% | |
| GGAATACCAGTCTCAAACAA+TGG | - | chr5.4:58772027-58772046 | None:intergenic | 40.0% | |
| GGCTGCATACAATGATCATA+TGG | + | chr5.4:58773630-58773649 | MS.gene26248:intron | 40.0% | |
| GTACTATTGCTGTAGCTTCT+GGG | + | chr5.4:58772547-58772566 | MS.gene26248:intron | 40.0% | |
| GTATTGTACTGTGCCATGTT+TGG | - | chr5.4:58770425-58770444 | None:intergenic | 40.0% | |
| GTCATTGCATTTCCAGATGA+TGG | + | chr5.4:58773186-58773205 | MS.gene26248:CDS | 40.0% | |
| GTTAATTCTGGTAGACTGTC+CGG | + | chr5.4:58772925-58772944 | MS.gene26248:intron | 40.0% | |
| TAAAGATCCCCAAATTGTGG+AGG | - | chr5.4:58771210-58771229 | None:intergenic | 40.0% | |
| TATTTGACAACATCCGTGCA+AGG | - | chr5.4:58771587-58771606 | None:intergenic | 40.0% | |
| TGGAGTTGGAATTTGGAAGA+GGG | + | chr5.4:58772182-58772201 | MS.gene26248:intron | 40.0% | |
| TGTGCCATGTTTGGTACTAA+TGG | - | chr5.4:58770416-58770435 | None:intergenic | 40.0% | |
| TTCGCTCAAATGATCCAGTT+GGG | - | chr5.4:58771530-58771549 | None:intergenic | 40.0% | |
| TTGAGCGAATGGAAGAAGAA+GGG | + | chr5.4:58771541-58771560 | MS.gene26248:CDS | 40.0% | |
| TTTATTGTCTGCCTACCTCT+TGG | + | chr5.4:58772721-58772740 | MS.gene26248:intron | 40.0% | |
| TTTGAGCGAATGGAAGAAGA+AGG | + | chr5.4:58771540-58771559 | MS.gene26248:CDS | 40.0% | |
| ! | ACCCTGTTTCTTTACACAAG+AGG | - | chr5.4:58773608-58773627 | None:intergenic | 40.0% |
| ! | ATAATCTTTTCCACAAGGGC+AGG | - | chr5.4:58770154-58770173 | None:intergenic | 40.0% |
| ! | TAAGGTGTTCCGCCTATATA+CGG | + | chr5.4:58772984-58773003 | MS.gene26248:intron | 40.0% |
| ! | TCATCGACAACACTGATTGT+AGG | - | chr5.4:58770876-58770895 | None:intergenic | 40.0% |
| ! | TGATGGATGGCAGAATATTG+AGG | + | chr5.4:58770893-58770912 | MS.gene26248:intron | 40.0% |
| ! | TGCTGAGTTGCTGTTAATTC+TGG | + | chr5.4:58772913-58772932 | MS.gene26248:intron | 40.0% |
| ! | TTCTGGGTGTTTTTCTCTAC+TGG | + | chr5.4:58772563-58772582 | MS.gene26248:intron | 40.0% |
| !! | GTTTTGCCATTGTTTGAGAC+TGG | + | chr5.4:58772018-58772037 | MS.gene26248:CDS | 40.0% |
| !!! | AGAAGGCATTTGCCTACTTT+TGG | + | chr5.4:58774207-58774226 | MS.gene26248:CDS | 40.0% |
| !!! | CTACTGGTTTTTGCTGTTGT+TGG | + | chr5.4:58772579-58772598 | MS.gene26248:intron | 40.0% |
| !!! | GGCCTTTTTTATGCTTATCC+AGG | + | chr5.4:58771328-58771347 | MS.gene26248:intron | 40.0% |
| !!! | GTACTTTTTGGGTGGTTTCT+CGG | + | chr5.4:58772139-58772158 | MS.gene26248:intron | 40.0% |
| !!! | TACTTTTTGGGTGGTTTCTC+GGG | + | chr5.4:58772140-58772159 | MS.gene26248:intron | 40.0% |
| AAAAATCCGTCTCCGGATTC+AGG | + | chr5.4:58772308-58772327 | MS.gene26248:intron | 45.0% | |
| AAAAATGAAAACGGGCAGCC+CGG | - | chr5.4:58773700-58773719 | None:intergenic | 45.0% | |
| AAGGGCAGGAGAAGAAATTG+AGG | - | chr5.4:58770140-58770159 | None:intergenic | 45.0% | |
| AATAACGCAGAAGAGCTCAG+AGG | + | chr5.4:58771384-58771403 | MS.gene26248:CDS | 45.0% | |
| AATTTCTTCTCCTGCCCTTG+TGG | + | chr5.4:58770141-58770160 | MS.gene26248:intron | 45.0% | |
| AGAGGTGGATGAGATAGTAG+AGG | + | chr5.4:58772378-58772397 | MS.gene26248:intron | 45.0% | |
| AGTTGGAATTTGGAAGAGGG+GGG | + | chr5.4:58772185-58772204 | MS.gene26248:intron | 45.0% | |
| ATATGACATTCATGCCCTGC+AGG | + | chr5.4:58771644-58771663 | MS.gene26248:CDS | 45.0% | |
| CAACCAGATGAAGATGGTGT+AGG | - | chr5.4:58771050-58771069 | None:intergenic | 45.0% | |
| CAGAAATGTGGTGAAAGAGG+TGG | + | chr5.4:58772363-58772382 | MS.gene26248:intron | 45.0% | |
| CGCTGAACAGGATTAACAGA+GGG | - | chr5.4:58772779-58772798 | None:intergenic | 45.0% | |
| CGTACTATTGCTGTAGCTTC+TGG | + | chr5.4:58772546-58772565 | MS.gene26248:intron | 45.0% | |
| CTGCGATTCACTCACAAAGA+TGG | + | chr5.4:58774088-58774107 | MS.gene26248:CDS | 45.0% | |
| GAGTTGGAATTTGGAAGAGG+GGG | + | chr5.4:58772184-58772203 | MS.gene26248:intron | 45.0% | |
| GCATGATTGGGTTTGTGCTT+AGG | + | chr5.4:58772820-58772839 | MS.gene26248:intron | 45.0% | |
| GCTGAACAGGATTAACAGAG+GGG | - | chr5.4:58772778-58772797 | None:intergenic | 45.0% | |
| GCTGCAATGGCGTGTTTATA+TGG | - | chr5.4:58770934-58770953 | None:intergenic | 45.0% | |
| GGAAGAAGAGAGAAGTGGTT+TGG | + | chr5.4:58772259-58772278 | MS.gene26248:intron | 45.0% | |
| GGAGTTGGAATTTGGAAGAG+GGG | + | chr5.4:58772183-58772202 | MS.gene26248:intron | 45.0% | |
| GGATGGCAGAATATTGAGGA+AGG | + | chr5.4:58770897-58770916 | MS.gene26248:intron | 45.0% | |
| GTGGAGTTGGAATTTGGAAG+AGG | + | chr5.4:58772181-58772200 | MS.gene26248:intron | 45.0% | |
| GTGTTGGAAGAAGAGAGAAG+TGG | + | chr5.4:58772254-58772273 | MS.gene26248:intron | 45.0% | |
| TCTCCGGATTCAGGCTAATT+TGG | + | chr5.4:58772317-58772336 | MS.gene26248:intron | 45.0% | |
| TGAGCGAATGGAAGAAGAAG+GGG | + | chr5.4:58771542-58771561 | MS.gene26248:CDS | 45.0% | |
| TGCTTAGGGAGCAGATTGTT+AGG | + | chr5.4:58772835-58772854 | MS.gene26248:intron | 45.0% | |
| TTAGGGAGCAGATTGTTAGG+TGG | + | chr5.4:58772838-58772857 | MS.gene26248:intron | 45.0% | |
| ! | AATCGCAGCCATGATTGGTT+AGG | - | chr5.4:58774076-58774095 | None:intergenic | 45.0% |
| ! | AATTAGCCTGAATCCGGAGA+CGG | - | chr5.4:58772317-58772336 | None:intergenic | 45.0% |
| ! | AGGCAAGGGTATGCATGATT+GGG | + | chr5.4:58772808-58772827 | MS.gene26248:intron | 45.0% |
| ! | AGGTCAACACGTTGCCTTTT+TGG | + | chr5.4:58771404-58771423 | MS.gene26248:CDS | 45.0% |
| ! | ATCGCAGCCATGATTGGTTA+GGG | - | chr5.4:58774075-58774094 | None:intergenic | 45.0% |
| ! | ATGCAGGAGCTTTAGTGTAC+CGG | + | chr5.4:58773678-58773697 | MS.gene26248:intron | 45.0% |
| ! | CATTTCCAGATGATGGTGCA+TGG | + | chr5.4:58773193-58773212 | MS.gene26248:CDS | 45.0% |
| ! | CCAGAGCTTTGACTGTAACT+GGG | - | chr5.4:58774247-58774266 | None:intergenic | 45.0% |
| ! | GTATGCACAAAGGTACGTGA+AGG | + | chr5.4:58773321-58773340 | MS.gene26248:CDS | 45.0% |
| ! | GTTGTAGCAGACGTTGCTTT+AGG | - | chr5.4:58772053-58772072 | None:intergenic | 45.0% |
| ! | GTTTTGCCTTTCTTCCCAAC+TGG | + | chr5.4:58771513-58771532 | MS.gene26248:CDS | 45.0% |
| ! | TATCCAGGTCTTTTGCCGAT+GGG | + | chr5.4:58771343-58771362 | MS.gene26248:intron | 45.0% |
| ! | TGTTGGTGTGGCTTCTGTTT+TGG | + | chr5.4:58772596-58772615 | MS.gene26248:intron | 45.0% |
| ! | TTATCCAGGTCTTTTGCCGA+TGG | + | chr5.4:58771342-58771361 | MS.gene26248:intron | 45.0% |
| !! | AATCCAAGGGAGTGCCTATA+GGG | + | chr5.4:58772478-58772497 | MS.gene26248:intron | 45.0% |
| !! | ACTCACTTTTGCTGCACCAT+TGG | - | chr5.4:58774029-58774048 | None:intergenic | 45.0% |
| !! | AGGATATCAAGGTGTTGTCG+TGG | + | chr5.4:58772398-58772417 | MS.gene26248:intron | 45.0% |
| !! | CAGAAAGTTTTGGCAGCCAA+TGG | + | chr5.4:58774010-58774029 | MS.gene26248:intron | 45.0% |
| !! | GTCTAATTTTTGGGAGTGGC+AGG | + | chr5.4:58773296-58773315 | MS.gene26248:intron | 45.0% |
| !! | TCAGTGTTGTCGATGATGGA+TGG | + | chr5.4:58770880-58770899 | MS.gene26248:intron | 45.0% |
| !!! | ACTTTTTGGGTGGTTTCTCG+GGG | + | chr5.4:58772141-58772160 | MS.gene26248:intron | 45.0% |
| !!! | GAGGTTTTATTTCGGAGACG+AGG | + | chr5.4:58771996-58772015 | MS.gene26248:CDS | 45.0% |
| !!! | GGTTTTTGCTGTTGTTGGTG+TGG | + | chr5.4:58772584-58772603 | MS.gene26248:intron | 45.0% |
| !!! | GTGTGGCTTCTGTTTTGGTT+CGG | + | chr5.4:58772601-58772620 | MS.gene26248:intron | 45.0% |
| !! | ATCATAAAAATAATAAATTA+AGG | - | chr5.4:58773160-58773179 | None:intergenic | 5.0% |
| AAACACGCCATTGCAGCCTA+TGG | + | chr5.4:58770937-58770956 | MS.gene26248:intron | 50.0% | |
| AAACCCATCGGCAAAAGACC+TGG | - | chr5.4:58771349-58771368 | None:intergenic | 50.0% | |
| ACTTGCAGAAGCCTCAGAGA+AGG | + | chr5.4:58774190-58774209 | MS.gene26248:intron | 50.0% | |
| AGGATAGTTCGGCTCAAGGA+AGG | + | chr5.4:58773351-58773370 | MS.gene26248:CDS | 50.0% | |
| AGGTACGTGAAGGTGACAAG+AGG | + | chr5.4:58773331-58773350 | MS.gene26248:CDS | 50.0% | |
| AGGTTCCTAAAGCAATCCGC+TGG | - | chr5.4:58772662-58772681 | None:intergenic | 50.0% | |
| CAAAAGCCGCCGTATATAGG+CGG | - | chr5.4:58772996-58773015 | None:intergenic | 50.0% | |
| CAAGAGGATAGTTCGGCTCA+AGG | + | chr5.4:58773347-58773366 | MS.gene26248:CDS | 50.0% | |
| CACCAAAAGCCGCCGTATAT+AGG | - | chr5.4:58772999-58773018 | None:intergenic | 50.0% | |
| CATACATAGGGTTCGGGAAG+GGG | - | chr5.4:58773661-58773680 | None:intergenic | 50.0% | |
| CCCAGTTACAGTCAAAGCTC+TGG | + | chr5.4:58774244-58774263 | MS.gene26248:CDS | 50.0% | |
| CTATGGAGCTGGCAAATTGC+CGG | + | chr5.4:58770954-58770973 | MS.gene26248:intron | 50.0% | |
| CTCAAGGAAGGTCATGTCTC+TGG | + | chr5.4:58773363-58773382 | MS.gene26248:CDS | 50.0% | |
| CTCCTGCATACATAGGGTTC+GGG | - | chr5.4:58773667-58773686 | None:intergenic | 50.0% | |
| CTGCCTACACCATCTTCATC+TGG | + | chr5.4:58771044-58771063 | MS.gene26248:intron | 50.0% | |
| CTGTTAATCCTGTTCAGCGC+TGG | + | chr5.4:58772780-58772799 | MS.gene26248:intron | 50.0% | |
| GAACACGCCATGTGTGACAT+AGG | - | chr5.4:58774053-58774072 | None:intergenic | 50.0% | |
| GAGTGAATCGCAGCCATGAT+TGG | - | chr5.4:58774081-58774100 | None:intergenic | 50.0% | |
| GCATACATAGGGTTCGGGAA+GGG | - | chr5.4:58773662-58773681 | None:intergenic | 50.0% | |
| GCGCTGAACAGGATTAACAG+AGG | - | chr5.4:58772780-58772799 | None:intergenic | 50.0% | |
| GCGTGTTCCCTAACCAATCA+TGG | + | chr5.4:58774065-58774084 | MS.gene26248:CDS | 50.0% | |
| GCTAGCAAGAGGAAGGTTGT+GGG | + | chr5.4:58772509-58772528 | MS.gene26248:intron | 50.0% | |
| GCTAGCCAATGACACCCTAT+AGG | - | chr5.4:58772495-58772514 | None:intergenic | 50.0% | |
| GCTCCTGCATACATAGGGTT+CGG | - | chr5.4:58773668-58773687 | None:intergenic | 50.0% | |
| GGATGGGTGGAGTTGGAATT+TGG | + | chr5.4:58772175-58772194 | MS.gene26248:intron | 50.0% | |
| GTAGGCAAATGCCTTCTCTG+AGG | - | chr5.4:58774204-58774223 | None:intergenic | 50.0% | |
| GTGAGTGCCTATGTCACACA+TGG | + | chr5.4:58774043-58774062 | MS.gene26248:CDS | 50.0% | |
| GTGGCAGGTTGTATGCACAA+AGG | + | chr5.4:58773311-58773330 | MS.gene26248:intron | 50.0% | |
| GTTGGGCCACCTCTTGAAAT+TGG | - | chr5.4:58771612-58771631 | None:intergenic | 50.0% | |
| TCCAACACCAGTCGTAGTAC+AGG | - | chr5.4:58772459-58772478 | None:intergenic | 50.0% | |
| TGCATACATAGGGTTCGGGA+AGG | - | chr5.4:58773663-58773682 | None:intergenic | 50.0% | |
| TTCCCGAACCCTATGTATGC+AGG | + | chr5.4:58773662-58773681 | MS.gene26248:intron | 50.0% | |
| ! | ACGACTGGTGTTGGAATCCA+AGG | + | chr5.4:58772464-58772483 | MS.gene26248:intron | 50.0% |
| ! | CGACAACACTGATTGTAGGC+AGG | - | chr5.4:58770872-58770891 | None:intergenic | 50.0% |
| ! | CGACTGGTGTTGGAATCCAA+GGG | + | chr5.4:58772465-58772484 | MS.gene26248:intron | 50.0% |
| ! | GAGGCAAGGGTATGCATGAT+TGG | + | chr5.4:58772807-58772826 | MS.gene26248:intron | 50.0% |
| ! | GAGTGCCTATAGGGTGTCAT+TGG | + | chr5.4:58772487-58772506 | MS.gene26248:intron | 50.0% |
| ! | GCCAGAGCTTTGACTGTAAC+TGG | - | chr5.4:58774248-58774267 | None:intergenic | 50.0% |
| ! | GTCATTGGCTAGCAAGAGGA+AGG | + | chr5.4:58772502-58772521 | MS.gene26248:intron | 50.0% |
| ! | TGCAGGAGCTTTAGTGTACC+GGG | + | chr5.4:58773679-58773698 | MS.gene26248:intron | 50.0% |
| !! | AGCAGACGTTGCTTTAGGAG+AGG | - | chr5.4:58772048-58772067 | None:intergenic | 50.0% |
| !! | GAATCCAAGGGAGTGCCTAT+AGG | + | chr5.4:58772477-58772496 | MS.gene26248:intron | 50.0% |
| !! | GCGGATTGCTTTAGGAACCT+TGG | + | chr5.4:58772662-58772681 | MS.gene26248:intron | 50.0% |
| !! | TTGTGCCAGCGGATTGCTTT+AGG | + | chr5.4:58772654-58772673 | MS.gene26248:intron | 50.0% |
| AAGAGGAAGGTTGTGGGAGG+TGG | + | chr5.4:58772515-58772534 | MS.gene26248:intron | 55.0% | |
| ACACCCTATAGGCACTCCCT+TGG | - | chr5.4:58772484-58772503 | None:intergenic | 55.0% | |
| ACCGCCATGGAAGAATGGCA+TGG | - | chr5.4:58771001-58771020 | None:intergenic | 55.0% | |
| AGAGGAAGGTTGTGGGAGGT+GGG | + | chr5.4:58772516-58772535 | MS.gene26248:intron | 55.0% | |
| AGCAAGAGGAAGGTTGTGGG+AGG | + | chr5.4:58772512-58772531 | MS.gene26248:intron | 55.0% | |
| AGCTGGCAAATTGCCGGTGA+CGG | + | chr5.4:58770960-58770979 | MS.gene26248:intron | 55.0% | |
| ATGGCACCGCCATGGAAGAA+TGG | - | chr5.4:58771006-58771025 | None:intergenic | 55.0% | |
| CAACATCCGTGCAAGGGTGA+AGG | - | chr5.4:58771580-58771599 | None:intergenic | 55.0% | |
| CAACTGCCTTCACCCTTGCA+CGG | + | chr5.4:58771571-58771590 | MS.gene26248:CDS | 55.0% | |
| CACCAGTCGTAGTACAGGCA+AGG | - | chr5.4:58772454-58772473 | None:intergenic | 55.0% | |
| CACCTTGCCTGTACTACGAC+TGG | + | chr5.4:58772449-58772468 | MS.gene26248:intron | 55.0% | |
| CAGTCGTAGTACAGGCAAGG+TGG | - | chr5.4:58772451-58772470 | None:intergenic | 55.0% | |
| CGCTTCCATGCACCATCATC+TGG | - | chr5.4:58773201-58773220 | None:intergenic | 55.0% | |
| CGGCAATTTGCCAGCTCCAT+AGG | - | chr5.4:58770956-58770975 | None:intergenic | 55.0% | |
| GCCATGCCATTCTTCCATGG+CGG | + | chr5.4:58770997-58771016 | MS.gene26248:intron | 55.0% | |
| GCCATGGAAGAATGGCATGG+CGG | - | chr5.4:58770998-58771017 | None:intergenic | 55.0% | |
| GCCTGTACTACGACTGGTGT+TGG | + | chr5.4:58772455-58772474 | MS.gene26248:intron | 55.0% | |
| GGCTAGCAAGAGGAAGGTTG+TGG | + | chr5.4:58772508-58772527 | MS.gene26248:intron | 55.0% | |
| GGGCACCCTAATTGAGTGTC+AGG | + | chr5.4:58773425-58773444 | MS.gene26248:CDS | 55.0% | |
| GGTGTTCCGCCTATATACGG+CGG | + | chr5.4:58772987-58773006 | MS.gene26248:intron | 55.0% | |
| TCAGTGGTCGGTCTCCCATA+AGG | + | chr5.4:58773246-58773265 | MS.gene26248:intron | 55.0% | |
| TCCGCCATGCCATTCTTCCA+TGG | + | chr5.4:58770994-58771013 | MS.gene26248:intron | 55.0% | |
| ! | ATTCTTCCATGGCGGTGCCA+TGG | + | chr5.4:58771005-58771024 | MS.gene26248:intron | 55.0% |
| ! | CAATTAGGGTGCCCCCAGAT+TGG | - | chr5.4:58773419-58773438 | None:intergenic | 55.0% |
| ! | CGCCTATATACGGCGGCTTT+TGG | + | chr5.4:58772994-58773013 | MS.gene26248:intron | 55.0% |
| ! | GGAAGAGGGGGGAGTTTTCA+CGG | + | chr5.4:58772196-58772215 | MS.gene26248:intron | 55.0% |
| !! | GGGTGTCATTGGCTAGCAAG+AGG | + | chr5.4:58772498-58772517 | MS.gene26248:intron | 55.0% |
| !! | TCAAGGTGTTGTCGTGGCGA+TGG | + | chr5.4:58772404-58772423 | MS.gene26248:intron | 55.0% |
| !!! | GGCTTCTGTTTTGGTTCGGC+TGG | + | chr5.4:58772605-58772624 | MS.gene26248:intron | 55.0% |
| AGGAAGGTTGTGGGAGGTGG+GGG | + | chr5.4:58772518-58772537 | MS.gene26248:intron | 60.0% | |
| GAGGAAGGTTGTGGGAGGTG+GGG | + | chr5.4:58772517-58772536 | MS.gene26248:intron | 60.0% | |
| GCCAGCTCCATAGGCTGCAA+TGG | - | chr5.4:58770947-58770966 | None:intergenic | 60.0% | |
| GCCATTGCAGCCTATGGAGC+TGG | + | chr5.4:58770943-58770962 | MS.gene26248:intron | 60.0% | |
| GGTGGTTTCTCGGGGTCGTT+GGG | + | chr5.4:58772149-58772168 | MS.gene26248:intron | 60.0% | |
| GTGGTTTCTCGGGGTCGTTG+GGG | + | chr5.4:58772150-58772169 | MS.gene26248:intron | 60.0% | |
| TGGTTTCTCGGGGTCGTTGG+GGG | + | chr5.4:58772151-58772170 | MS.gene26248:intron | 60.0% | |
| ! | CCTCACTACCAGCGCTGAAC+AGG | - | chr5.4:58772791-58772810 | None:intergenic | 60.0% |
| !! | CAGCGCTGGTAGTGAGGCAA+GGG | + | chr5.4:58772794-58772813 | MS.gene26248:intron | 60.0% |
| !! | CCTGTTCAGCGCTGGTAGTG+AGG | + | chr5.4:58772788-58772807 | MS.gene26248:intron | 60.0% |
| !! | TCAGCGCTGGTAGTGAGGCA+AGG | + | chr5.4:58772793-58772812 | MS.gene26248:intron | 60.0% |
| GGGTGGTTTCTCGGGGTCGT+TGG | + | chr5.4:58772148-58772167 | MS.gene26248:intron | 65.0% | |
| TGGCTACCATGGCACCGCCA+TGG | - | chr5.4:58771014-58771033 | None:intergenic | 65.0% | |
| TGGGGGAGGATGGGTGGAGT+TGG | + | chr5.4:58772168-58772187 | MS.gene26248:intron | 65.0% | |
| TTTCTCGGGGTCGTTGGGGG+AGG | + | chr5.4:58772154-58772173 | MS.gene26248:intron | 65.0% | |
| CGGGGTCGTTGGGGGAGGAT+GGG | + | chr5.4:58772159-58772178 | MS.gene26248:intron | 70.0% | |
| GGTCGTTGGGGGAGGATGGG+TGG | + | chr5.4:58772162-58772181 | MS.gene26248:intron | 70.0% | |
| TCGGGGTCGTTGGGGGAGGA+TGG | + | chr5.4:58772158-58772177 | MS.gene26248:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 58770009 | 58774331 | 58770009 | ID=MS.gene26248 |
| chr5.4 | mRNA | 58770009 | 58774331 | 58770009 | ID=MS.gene26248.t1;Parent=MS.gene26248 |
| chr5.4 | exon | 58770009 | 58770133 | 58770009 | ID=MS.gene26248.t1.exon1;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58770009 | 58770133 | 58770009 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| chr5.4 | exon | 58771350 | 58771665 | 58771350 | ID=MS.gene26248.t1.exon2;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58771350 | 58771665 | 58771350 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| chr5.4 | exon | 58771994 | 58772089 | 58771994 | ID=MS.gene26248.t1.exon3;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58771994 | 58772089 | 58771994 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| chr5.4 | exon | 58773183 | 58773251 | 58773183 | ID=MS.gene26248.t1.exon4;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58773183 | 58773251 | 58773183 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| chr5.4 | exon | 58773318 | 58773446 | 58773318 | ID=MS.gene26248.t1.exon5;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58773318 | 58773446 | 58773318 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| chr5.4 | exon | 58774013 | 58774109 | 58774013 | ID=MS.gene26248.t1.exon6;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58774013 | 58774109 | 58774013 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| chr5.4 | exon | 58774198 | 58774331 | 58774198 | ID=MS.gene26248.t1.exon7;Parent=MS.gene26248.t1 |
| chr5.4 | CDS | 58774198 | 58774331 | 58774198 | ID=cds.MS.gene26248.t1;Parent=MS.gene26248.t1 |
| Gene Sequence |
| Protein sequence |
