Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055573.t1 | RHN80765.1 | 98.7 | 447 | 6 | 0 | 1 | 447 | 1 | 447 | 7.80E-251 | 875.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055573.t1 | Q39230 | 74.7 | 451 | 110 | 2 | 1 | 447 | 1 | 451 | 2.8e-196 | 686.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055573.t1 | A0A396JX57 | 98.7 | 447 | 6 | 0 | 1 | 447 | 1 | 447 | 5.6e-251 | 875.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055573 | MS.gene26248 | 0.815521 | 8.86E-52 | -1.69E-46 |
| MS.gene055573 | MS.gene44095 | 0.924445 | 6.98E-90 | -1.69E-46 |
| MS.gene055573 | MS.gene98043 | 0.801678 | 8.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055573 | MS.gene45075 | PPI |
| MS.gene38588 | MS.gene055573 | PPI |
| MS.gene055573 | MS.gene013131 | PPI |
| MS.gene055573 | MS.gene055486 | PPI |
| MS.gene055573 | MS.gene35246 | PPI |
| MS.gene055573 | MS.gene43889 | PPI |
| MS.gene026998 | MS.gene055573 | PPI |
| MS.gene82886 | MS.gene055573 | PPI |
| MS.gene027585 | MS.gene055573 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055573.t1 | MTR_1g082850 | 99.329 | 447 | 3 | 0 | 1 | 447 | 1 | 447 | 0.0 | 926 |
| MS.gene055573.t1 | MTR_3g099470 | 36.041 | 394 | 233 | 8 | 46 | 426 | 151 | 538 | 2.80e-75 | 245 |
| MS.gene055573.t1 | MTR_7g029025 | 75.641 | 156 | 16 | 2 | 288 | 442 | 123 | 257 | 1.25e-72 | 231 |
| MS.gene055573.t1 | MTR_7g029025 | 84.615 | 130 | 20 | 0 | 1 | 130 | 1 | 130 | 1.17e-60 | 200 |
| MS.gene055573.t1 | MTR_3g099470 | 31.090 | 312 | 207 | 5 | 46 | 355 | 151 | 456 | 3.21e-47 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055573.t1 | AT5G27470 | 76.497 | 451 | 102 | 3 | 1 | 447 | 1 | 451 | 0.0 | 728 |
| MS.gene055573.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 106 | 505 | 3.06e-73 | 239 |
| MS.gene055573.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 104 | 503 | 4.28e-73 | 239 |
| MS.gene055573.t1 | AT1G11870 | 36.313 | 358 | 208 | 7 | 85 | 426 | 18 | 371 | 8.05e-72 | 231 |
| MS.gene055573.t1 | AT1G11870 | 28.655 | 342 | 231 | 5 | 27 | 367 | 106 | 435 | 2.80e-46 | 166 |
| MS.gene055573.t1 | AT1G11870 | 29.204 | 339 | 227 | 5 | 19 | 356 | 98 | 424 | 3.94e-46 | 166 |
| MS.gene055573.t1 | AT1G11870 | 29.530 | 298 | 197 | 5 | 27 | 323 | 106 | 391 | 4.90e-39 | 145 |
Find 104 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTTCTTCATCAAAT+TGG | 0.134658 | 1.2:+60046744 | None:intergenic |
| AAACCTCTTGAATTCTAAAT+TGG | 0.181417 | 1.2:-60047787 | MS.gene055573:CDS |
| TGAGATTCACGGATGATTTC+AGG | 0.189941 | 1.2:+60048206 | None:intergenic |
| CAAATTGTTTCCATCGTATC+TGG | 0.244081 | 1.2:-60045219 | MS.gene055573:CDS |
| CCCATGAATCATTATCATTT+GGG | 0.270325 | 1.2:+60045662 | None:intergenic |
| CGTATCGAATTTCTAATTTA+CGG | 0.289372 | 1.2:+60045088 | None:intergenic |
| TTCCCTTTGGCTTCATTGTT+CGG | 0.292118 | 1.2:+60044038 | None:intergenic |
| TCCCATGAATCATTATCATT+TGG | 0.297281 | 1.2:+60045661 | None:intergenic |
| AACCAAGCTCTAATCATGTT+TGG | 0.299701 | 1.2:-60046857 | MS.gene055573:CDS |
| TCTCTACTCCATCCTCCTTC+TGG | 0.313005 | 1.2:+60044120 | None:intergenic |
| GTATCGAATTTCTAATTTAC+GGG | 0.328738 | 1.2:+60045089 | None:intergenic |
| GGCCTTCGATTTCTTCCCTT+TGG | 0.338225 | 1.2:+60044025 | None:intergenic |
| ACCAAGCTCTAATCATGTTT+GGG | 0.343110 | 1.2:-60046856 | MS.gene055573:CDS |
| GTAAAGTTCTTCATCAAATT+GGG | 0.357931 | 1.2:+60046745 | None:intergenic |
| TATGCTTACTCGCTTGAGTT+TGG | 0.360842 | 1.2:+60047977 | None:intergenic |
| GTCCTTAGGCCATTCATGTT+TGG | 0.363259 | 1.2:-60044089 | MS.gene055573:CDS |
| CAATCTCTTCCGTGTAGAAA+AGG | 0.380485 | 1.2:-60048237 | MS.gene055573:CDS |
| TACGATGGAAACAATTTGAT+AGG | 0.382311 | 1.2:+60045224 | None:intergenic |
| TCTCATGGTCGGGATACTTT+AGG | 0.390122 | 1.2:-60045736 | MS.gene055573:CDS |
| TCCACATGATTCTTGAGCTT+CGG | 0.390757 | 1.2:+60047590 | None:intergenic |
| CCCCAAATGATAATGATTCA+TGG | 0.406858 | 1.2:-60045663 | MS.gene055573:CDS |
| AATTCTAAATTGGAAACCAT+TGG | 0.410473 | 1.2:-60047777 | MS.gene055573:CDS |
| GAGATAGCTGATTTGAAGAA+AGG | 0.411201 | 1.2:-60047551 | MS.gene055573:intron |
| CTTTGGCTTCATTGTTCGGT+TGG | 0.412270 | 1.2:+60044042 | None:intergenic |
| ATGAATGGCCTAAGGACTTC+TGG | 0.414262 | 1.2:+60044095 | None:intergenic |
| ACGTCTTTCTTGATGAAGAA+TGG | 0.419469 | 1.2:+60046791 | None:intergenic |
| GAATTTCTAATTTACGGGCT+TGG | 0.419762 | 1.2:+60045094 | None:intergenic |
| GTAGTCTGTACAATTTGAAC+AGG | 0.430316 | 1.2:+60045116 | None:intergenic |
| TCTTGCTTTCGTAAAGAAGC+TGG | 0.438723 | 1.2:-60045760 | MS.gene055573:CDS |
| TTCCAGCTTCTAAAACATAC+AGG | 0.439898 | 1.2:-60045149 | MS.gene055573:CDS |
| ATGATAGGAGCCGATGTTGC+TGG | 0.453917 | 1.2:-60046920 | MS.gene055573:intron |
| GCCGATGTTGCTGGAGGTAG+AGG | 0.459004 | 1.2:-60046911 | MS.gene055573:CDS |
| TTGTTCGGTTGGTTCTTGAA+TGG | 0.460611 | 1.2:+60044053 | None:intergenic |
| ACTGCTCCACCTTCTCGAAC+TGG | 0.468726 | 1.2:+60045698 | None:intergenic |
| CTTCTTTAGGTAACCGGGGA+AGG | 0.469820 | 1.2:-60045966 | MS.gene055573:intron |
| TTGGGCTAGTTGAGCACACT+TGG | 0.471518 | 1.2:+60046763 | None:intergenic |
| ACAATCTTGTTGTCCGAACA+TGG | 0.475085 | 1.2:-60047631 | MS.gene055573:CDS |
| TAGAGATACCAGAAGTCCTT+AGG | 0.475235 | 1.2:-60044103 | MS.gene055573:CDS |
| TCGGTTGGTTCTTGAATGGC+AGG | 0.477198 | 1.2:+60044057 | None:intergenic |
| CATGCTTGCTGTAGGTATGC+TGG | 0.481103 | 1.2:-60045790 | MS.gene055573:intron |
| GCCCAAACATGATTAGAGCT+TGG | 0.483827 | 1.2:+60046855 | None:intergenic |
| TTATCAATCTCGACAAAGAA+TGG | 0.490410 | 1.2:-60048145 | MS.gene055573:CDS |
| GAGATTCACGGATGATTTCA+GGG | 0.494661 | 1.2:+60048207 | None:intergenic |
| CCTTCTCGAACTGGTGAACT+CGG | 0.504962 | 1.2:+60045707 | None:intergenic |
| ACAAACCTCATCATTGCTGA+TGG | 0.508461 | 1.2:+60047731 | None:intergenic |
| ATTTGATGAAGAACTTTACA+AGG | 0.508998 | 1.2:-60046741 | MS.gene055573:intron |
| TTCCAAACATGAATGGCCTA+AGG | 0.510108 | 1.2:+60044087 | None:intergenic |
| AATCTCTTCCGTGTAGAAAA+GGG | 0.512839 | 1.2:-60048236 | MS.gene055573:CDS |
| CGAGTTTATTTCTAAATCTG+AGG | 0.522194 | 1.2:-60047859 | MS.gene055573:CDS |
| GTTCTCTAGTATGCAGCAAA+TGG | 0.522458 | 1.2:+60044145 | None:intergenic |
| CAAGTTACCTTAGGGGTAGA+CGG | 0.525382 | 1.2:+60045868 | None:intergenic |
| CGTAAAGAAGCTGGATCTCA+TGG | 0.526898 | 1.2:-60045751 | MS.gene055573:CDS |
| CCCAAATGATAATGATTCAT+GGG | 0.530653 | 1.2:-60045662 | MS.gene055573:CDS |
| AACGACGGCGTTGAGATTCA+CGG | 0.531799 | 1.2:+60048195 | None:intergenic |
| ATCCTACCCGTCTACCCCTA+AGG | 0.539398 | 1.2:-60045875 | MS.gene055573:intron |
| AATTCGATACGGACAGAAGA+AGG | 0.542480 | 1.2:-60045076 | MS.gene055573:intron |
| ATACTTATCATCTCCTTCCC+CGG | 0.545996 | 1.2:+60045953 | None:intergenic |
| GAGAACAACCAGAAGGAGGA+TGG | 0.546439 | 1.2:-60044128 | MS.gene055573:CDS |
| AAGTTACCTTAGGGGTAGAC+GGG | 0.552419 | 1.2:+60045869 | None:intergenic |
| AACCGAACAATGAAGCCAAA+GGG | 0.552476 | 1.2:-60044040 | MS.gene055573:CDS |
| CAACCGAACAATGAAGCCAA+AGG | 0.552548 | 1.2:-60044041 | MS.gene055573:CDS |
| ACCTCTACCTCCAGCAACAT+CGG | 0.553887 | 1.2:+60046910 | None:intergenic |
| AGAAGCTGGATCTCATGGTC+GGG | 0.554511 | 1.2:-60045746 | MS.gene055573:CDS |
| TTCGTCAACTACTTCGACGC+TGG | 0.554815 | 1.2:+60048169 | None:intergenic |
| GAACTCCACTCTCACGGCTA+CGG | 0.555219 | 1.2:-60044174 | MS.gene055573:CDS |
| GTGCATATCATTCAGACGAA+TGG | 0.559096 | 1.2:-60045902 | MS.gene055573:CDS |
| AGTTCACCAGTTCGAGAAGG+TGG | 0.559770 | 1.2:-60045704 | MS.gene055573:CDS |
| TTTGTTGAACTCCACTCTCA+CGG | 0.563048 | 1.2:-60044180 | MS.gene055573:CDS |
| TTAGGGGTAGACGGGTAGGA+TGG | 0.567147 | 1.2:+60045877 | None:intergenic |
| CCTTTCCGTAGCCGTGAGAG+TGG | 0.571162 | 1.2:+60044169 | None:intergenic |
| CAATCTTGTTGTCCGAACAT+GGG | 0.572903 | 1.2:-60047630 | MS.gene055573:CDS |
| TTCTAAAACATACAGGGAGT+TGG | 0.576857 | 1.2:-60045142 | MS.gene055573:CDS |
| AAGAAGCTGGATCTCATGGT+CGG | 0.582102 | 1.2:-60045747 | MS.gene055573:CDS |
| ACGATGGAAACAATTTGATA+GGG | 0.582357 | 1.2:+60045225 | None:intergenic |
| GGTTTCTATCTCAAAGGAGA+TGG | 0.585776 | 1.2:-60046890 | MS.gene055573:CDS |
| CTCAGATTTAGAAATAAACT+CGG | 0.588681 | 1.2:+60047860 | None:intergenic |
| CCGAGTTCACCAGTTCGAGA+AGG | 0.591093 | 1.2:-60045707 | MS.gene055573:CDS |
| GGTAGAGGTTTCTATCTCAA+AGG | 0.591210 | 1.2:-60046896 | MS.gene055573:CDS |
| TTTCCAATTTAGAATTCAAG+AGG | 0.592409 | 1.2:+60047784 | None:intergenic |
| ATCATGAACGAGGTTTCCAA+TGG | 0.592505 | 1.2:+60047761 | None:intergenic |
| TGTTCCCATCAGCAATGATG+AGG | 0.598513 | 1.2:-60047736 | MS.gene055573:intron |
| AATCTTGTTGTCCGAACATG+GGG | 0.604845 | 1.2:-60047629 | MS.gene055573:CDS |
| CCACTCTCACGGCTACGGAA+AGG | 0.609655 | 1.2:-60044169 | MS.gene055573:CDS |
| CCATGAATCATTATCATTTG+GGG | 0.613961 | 1.2:+60045663 | None:intergenic |
| CGTAAATTAGAAATTCGATA+CGG | 0.619082 | 1.2:-60045087 | MS.gene055573:CDS |
| CAAACCTCATCATTGCTGAT+GGG | 0.630129 | 1.2:+60047732 | None:intergenic |
| CTAAATTCAAGTTACCTTAG+GGG | 0.638039 | 1.2:+60045861 | None:intergenic |
| TACCTTAGGGGTAGACGGGT+AGG | 0.642685 | 1.2:+60045873 | None:intergenic |
| TGATTCATGGGACATGCATG+AGG | 0.643636 | 1.2:-60045650 | MS.gene055573:CDS |
| TAGATCATACTTCTTAGCCG+CGG | 0.644071 | 1.2:+60045182 | None:intergenic |
| TCCAGCTTCTAAAACATACA+GGG | 0.644409 | 1.2:-60045148 | MS.gene055573:CDS |
| AGAAGTATGATCTAGAAGCA+TGG | 0.654923 | 1.2:-60045173 | MS.gene055573:CDS |
| GTTCAAAGCTCCAGATACGA+TGG | 0.655676 | 1.2:+60045209 | None:intergenic |
| AGCCAAAGGGAAGAAATCGA+AGG | 0.662628 | 1.2:-60044027 | MS.gene055573:CDS |
| ACCGAAGCTCAAGAATCATG+TGG | 0.667853 | 1.2:-60047591 | MS.gene055573:CDS |
| CTCTGAGGACTTCTACAAAG+CGG | 0.670185 | 1.2:-60045614 | MS.gene055573:intron |
| ACTAGAGAACAACCAGAAGG+AGG | 0.673239 | 1.2:-60044132 | MS.gene055573:CDS |
| ATAGGAGCCGATGTTGCTGG+AGG | 0.692103 | 1.2:-60046917 | MS.gene055573:intron |
| CTTCGACGCTGGCAAAACGA+CGG | 0.699893 | 1.2:+60048180 | None:intergenic |
| TGGAGCTTTGAACGATGCCG+CGG | 0.704815 | 1.2:-60045199 | MS.gene055573:CDS |
| AGAAGTCAACAAAATCAACA+AGG | 0.710411 | 1.2:-60048006 | MS.gene055573:CDS |
| CATACTAGAGAACAACCAGA+AGG | 0.710513 | 1.2:-60044135 | MS.gene055573:CDS |
| TGGGAACAGAATCATGAACG+AGG | 0.772919 | 1.2:+60047751 | None:intergenic |
| TCTGAATGATATGCACACAG+AGG | 0.783230 | 1.2:+60045909 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAAAAACAAATTATA+AGG | + | chr1.2:60045671-60045690 | None:intergenic | 10.0% |
| !! | GAAAATAAAAAATAAAAAAG+AGG | + | chr1.2:60046983-60047002 | None:intergenic | 10.0% |
| !! | TACATGTTTAATATTAAAAT+TGG | - | chr1.2:60046433-60046452 | MS.gene055573:intron | 10.0% |
| !! | TTATATAAATTGATATAACA+AGG | + | chr1.2:60047343-60047362 | None:intergenic | 10.0% |
| !! | ATTCCAAAAAAATTTAAACA+AGG | + | chr1.2:60047454-60047473 | None:intergenic | 15.0% |
| !! | CTTATAATTGAATTCTTATA+AGG | + | chr1.2:60045593-60045612 | None:intergenic | 15.0% |
| !! | TTCACTATAATTAATAATGA+CGG | + | chr1.2:60046104-60046123 | None:intergenic | 15.0% |
| !!! | AAGAAGTTTTTATTTTTTTG+TGG | - | chr1.2:60046123-60046142 | MS.gene055573:intron | 15.0% |
| !!! | CACTTTTACATTATATTATA+AGG | + | chr1.2:60045161-60045180 | None:intergenic | 15.0% |
| !!! | GATAATTGTTTTTTAATCTT+GGG | - | chr1.2:60046455-60046474 | MS.gene055573:intron | 15.0% |
| !!! | TATATAATATAGTTTTGGTA+TGG | - | chr1.2:60046742-60046761 | MS.gene055573:CDS | 15.0% |
| !!! | TATCCTTGTTTAAATTTTTT+TGG | - | chr1.2:60047448-60047467 | MS.gene055573:intron | 15.0% |
| !!! | TATTCTAAGAATATTAAACA+AGG | + | chr1.2:60047839-60047858 | None:intergenic | 15.0% |
| !! | AATATAAGCAAAACATGATT+AGG | + | chr1.2:60044214-60044233 | None:intergenic | 20.0% |
| !! | ATCATGCATCAAATAAAAAT+AGG | + | chr1.2:60045335-60045354 | None:intergenic | 20.0% |
| !! | CTTTAGATTAATTTAACACT+GGG | + | chr1.2:60046777-60046796 | None:intergenic | 20.0% |
| !!! | AATCATGTTTTGCTTATATT+AGG | - | chr1.2:60044214-60044233 | MS.gene055573:intron | 20.0% |
| !!! | ATTTTTATTTGATGCATGAT+AGG | - | chr1.2:60045335-60045354 | MS.gene055573:intron | 20.0% |
| !!! | CTTTAATATTTTGTGAGATT+TGG | - | chr1.2:60044800-60044819 | MS.gene055573:intron | 20.0% |
| !!! | GCAAATAAAGTTATTGATTT+GGG | + | chr1.2:60046960-60046979 | None:intergenic | 20.0% |
| !!! | GGATAATTGTTTTTTAATCT+TGG | - | chr1.2:60046454-60046473 | MS.gene055573:intron | 20.0% |
| !!! | TAGAATAATTTAGTTTGTGA+TGG | - | chr1.2:60047562-60047581 | MS.gene055573:CDS | 20.0% |
| !!! | TTGTTTTCAAATTCAATGTA+TGG | - | chr1.2:60044933-60044952 | MS.gene055573:intron | 20.0% |
| !!! | TTTTTGTATTATACTCTTTC+TGG | - | chr1.2:60045891-60045910 | MS.gene055573:CDS | 20.0% |
| ! | AAAATATCAACTATATACCG+AGG | + | chr1.2:60045630-60045649 | None:intergenic | 25.0% |
| ! | AAACCTCTTGAATTCTAAAT+TGG | - | chr1.2:60044483-60044502 | MS.gene055573:intron | 25.0% |
| ! | AATTCTAAATTGGAAACCAT+TGG | - | chr1.2:60044493-60044512 | MS.gene055573:intron | 25.0% |
| ! | AATTGTTTCATGTGTGTTAT+AGG | - | chr1.2:60045033-60045052 | MS.gene055573:intron | 25.0% |
| ! | AGAATAAGAGTCATTGAAAA+AGG | - | chr1.2:60046054-60046073 | MS.gene055573:intron | 25.0% |
| ! | AGGAAGAATTTAGAAATTTC+AGG | + | chr1.2:60047762-60047781 | None:intergenic | 25.0% |
| ! | AGTGTTTGTATTGAAATTCA+TGG | - | chr1.2:60044595-60044614 | MS.gene055573:intron | 25.0% |
| ! | AGTTTAACTGCAGAATATAT+TGG | + | chr1.2:60047612-60047631 | None:intergenic | 25.0% |
| ! | ATACCTAAGTTCAATATTGA+TGG | - | chr1.2:60047222-60047241 | MS.gene055573:intron | 25.0% |
| ! | ATATTGCTCAAGTAAAAACA+TGG | + | chr1.2:60047948-60047967 | None:intergenic | 25.0% |
| ! | ATTTATATAACCCATTCTTC+TGG | - | chr1.2:60047353-60047372 | MS.gene055573:intron | 25.0% |
| ! | ATTTGATGAAGAACTTTACA+AGG | - | chr1.2:60045529-60045548 | MS.gene055573:intron | 25.0% |
| ! | CCAGTGTTAAATTAATCTAA+AGG | - | chr1.2:60046775-60046794 | MS.gene055573:CDS | 25.0% |
| ! | CCTTTAGATTAATTTAACAC+TGG | + | chr1.2:60046778-60046797 | None:intergenic | 25.0% |
| ! | CGTAAATTAGAAATTCGATA+CGG | - | chr1.2:60047183-60047202 | MS.gene055573:intron | 25.0% |
| ! | CGTATCGAATTTCTAATTTA+CGG | + | chr1.2:60047185-60047204 | None:intergenic | 25.0% |
| ! | CTAACATATATGAAGAACTT+GGG | + | chr1.2:60047318-60047337 | None:intergenic | 25.0% |
| ! | CTATTGTACAAATCATGAAT+AGG | + | chr1.2:60045071-60045090 | None:intergenic | 25.0% |
| ! | CTCAGATTTAGAAATAAACT+CGG | + | chr1.2:60044413-60044432 | None:intergenic | 25.0% |
| ! | GTAAAGTTCTTCATCAAATT+GGG | + | chr1.2:60045528-60045547 | None:intergenic | 25.0% |
| ! | GTATCGAATTTCTAATTTAC+GGG | + | chr1.2:60047184-60047203 | None:intergenic | 25.0% |
| ! | GTGTTTGTATTGAAATTCAT+GGG | - | chr1.2:60044596-60044615 | MS.gene055573:intron | 25.0% |
| ! | TAACACACATGAAACAATTA+AGG | + | chr1.2:60045032-60045051 | None:intergenic | 25.0% |
| ! | TACATTTGTATTACATCACT+TGG | - | chr1.2:60046924-60046943 | MS.gene055573:intron | 25.0% |
| ! | TCATTGAAAAAGGAAACTTA+GGG | - | chr1.2:60046064-60046083 | MS.gene055573:intron | 25.0% |
| ! | TCTAACATATATGAAGAACT+TGG | + | chr1.2:60047319-60047338 | None:intergenic | 25.0% |
| ! | TGTAAAGTTCTTCATCAAAT+TGG | + | chr1.2:60045529-60045548 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCAGGAAGAAT+GGG | + | chr1.2:60047753-60047772 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCCAGAAGAAT+GGG | + | chr1.2:60047366-60047385 | None:intergenic | 25.0% |
| ! | TTCAATAGTTTCTACATTTC+TGG | - | chr1.2:60045302-60045321 | MS.gene055573:intron | 25.0% |
| ! | TTCACACTTACTAAGAAATT+TGG | - | chr1.2:60045941-60045960 | MS.gene055573:CDS | 25.0% |
| ! | TTTAGAAATTTCAGGAAGAA+TGG | + | chr1.2:60047754-60047773 | None:intergenic | 25.0% |
| ! | TTTAGAAATTTCCAGAAGAA+TGG | + | chr1.2:60047367-60047386 | None:intergenic | 25.0% |
| ! | TTTCAAATTCAATGTATGGT+GGG | - | chr1.2:60044937-60044956 | MS.gene055573:intron | 25.0% |
| !! | AAAGTTTTTCCAAACATGAA+TGG | + | chr1.2:60048193-60048212 | None:intergenic | 25.0% |
| !! | AACTAAATTCAAGTTACCTT+AGG | + | chr1.2:60046414-60046433 | None:intergenic | 25.0% |
| !! | AAGAAGTTATTCTAAAGAGA+GGG | - | chr1.2:60047281-60047300 | MS.gene055573:intron | 25.0% |
| !! | ACTAAATTCAAGTTACCTTA+GGG | + | chr1.2:60046413-60046432 | None:intergenic | 25.0% |
| !! | AGGATTTTCTTTTCTTCTTT+AGG | - | chr1.2:60046291-60046310 | MS.gene055573:intron | 25.0% |
| !! | CAATAATGTTATTTGCAGTT+TGG | + | chr1.2:60045718-60045737 | None:intergenic | 25.0% |
| !! | CATGGGATAATATATGTTTT+AGG | - | chr1.2:60044613-60044632 | MS.gene055573:intron | 25.0% |
| !! | CCTTTGGAAAAATTGAAAAA+TGG | + | chr1.2:60045812-60045831 | None:intergenic | 25.0% |
| !! | GGCAAATAAAGTTATTGATT+TGG | + | chr1.2:60046961-60046980 | None:intergenic | 25.0% |
| !! | TAAGAAGTTATTCTAAAGAG+AGG | - | chr1.2:60047280-60047299 | MS.gene055573:intron | 25.0% |
| !! | TCTTGTTATAAAGTTAAGTG+AGG | + | chr1.2:60045843-60045862 | None:intergenic | 25.0% |
| !! | TTTCCAATTTAGAATTCAAG+AGG | + | chr1.2:60044489-60044508 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCAATGTATGG+TGG | - | chr1.2:60044936-60044955 | MS.gene055573:intron | 25.0% |
| !!! | AACAACGTTTTTGTTTTTTG+AGG | + | chr1.2:60044972-60044991 | None:intergenic | 25.0% |
| !!! | AATAATTTAGTTTGTGATGG+TGG | - | chr1.2:60047565-60047584 | MS.gene055573:CDS | 25.0% |
| !!! | ACAACTAAAAGAAAAGTGTT+GGG | + | chr1.2:60045003-60045022 | None:intergenic | 25.0% |
| !!! | CCATTTTTCAATTTTTCCAA+AGG | - | chr1.2:60045809-60045828 | MS.gene055573:intron | 25.0% |
| !!! | TGATTTTGTTGACTTCTTTA+CGG | + | chr1.2:60044261-60044280 | None:intergenic | 25.0% |
| !!! | TGTTTCTTTTTTCTGTTGAT+TGG | - | chr1.2:60045741-60045760 | MS.gene055573:CDS | 25.0% |
| AAATCAGAGGAAAAAGATTG+GGG | + | chr1.2:60046260-60046279 | None:intergenic | 30.0% | |
| AAGCCATCAATATTGAACTT+AGG | + | chr1.2:60047228-60047247 | None:intergenic | 30.0% | |
| ACATGAAACAATTAAGGAAG+CGG | + | chr1.2:60045026-60045045 | None:intergenic | 30.0% | |
| ACGATGGAAACAATTTGATA+GGG | + | chr1.2:60047048-60047067 | None:intergenic | 30.0% | |
| ACTGTGATTACAAAAACAAG+AGG | + | chr1.2:60044855-60044874 | None:intergenic | 30.0% | |
| AGAAGTCAACAAAATCAACA+AGG | - | chr1.2:60044264-60044283 | MS.gene055573:intron | 30.0% | |
| AGATGCATTAAACATTCCTT+TGG | + | chr1.2:60046843-60046862 | None:intergenic | 30.0% | |
| AGTATTATTCGCTAACTGTT+GGG | - | chr1.2:60047649-60047668 | MS.gene055573:intron | 30.0% | |
| CAAATCAGAGGAAAAAGATT+GGG | + | chr1.2:60046261-60046280 | None:intergenic | 30.0% | |
| CCATGAATCATTATCATTTG+GGG | + | chr1.2:60046610-60046629 | None:intergenic | 30.0% | |
| CCCATGAATCATTATCATTT+GGG | + | chr1.2:60046611-60046630 | None:intergenic | 30.0% | |
| CTTAGAATAACTGTCATTGA+TGG | - | chr1.2:60047850-60047869 | MS.gene055573:CDS | 30.0% | |
| GAAAAAGATTGCTGAAAAAG+AGG | - | chr1.2:60044441-60044460 | MS.gene055573:intron | 30.0% | |
| GTCATTGAAAAAGGAAACTT+AGG | - | chr1.2:60046063-60046082 | MS.gene055573:intron | 30.0% | |
| TAACATAAAAAGCTTCAGCT+GGG | + | chr1.2:60045236-60045255 | None:intergenic | 30.0% | |
| TACGATGGAAACAATTTGAT+AGG | + | chr1.2:60047049-60047068 | None:intergenic | 30.0% | |
| TAGTATTATTCGCTAACTGT+TGG | - | chr1.2:60047648-60047667 | MS.gene055573:intron | 30.0% | |
| TCAAATCAGAGGAAAAAGAT+TGG | + | chr1.2:60046262-60046281 | None:intergenic | 30.0% | |
| TCCCATGAATCATTATCATT+TGG | + | chr1.2:60046612-60046631 | None:intergenic | 30.0% | |
| TTAGATGCTTCTGCTTAAAA+TGG | + | chr1.2:60045920-60045939 | None:intergenic | 30.0% | |
| TTATCAATCTCGACAAAGAA+TGG | - | chr1.2:60044125-60044144 | MS.gene055573:CDS | 30.0% | |
| TTCAAATTCAATGTATGGTG+GGG | - | chr1.2:60044938-60044957 | MS.gene055573:intron | 30.0% | |
| TTCAATGACTCTTATTCTCA+TGG | + | chr1.2:60046052-60046071 | None:intergenic | 30.0% | |
| TTTCATCGAAATTGCTTCTT+AGG | + | chr1.2:60046022-60046041 | None:intergenic | 30.0% | |
| ! | ACTTGAGCAATATGTTCTTT+TGG | - | chr1.2:60047955-60047974 | MS.gene055573:intron | 30.0% |
| ! | AGAAGTTATTCTAAAGAGAG+GGG | - | chr1.2:60047282-60047301 | MS.gene055573:intron | 30.0% |
| ! | CCCAAATGATAATGATTCAT+GGG | - | chr1.2:60046608-60046627 | MS.gene055573:intron | 30.0% |
| ! | CTAAATTCAAGTTACCTTAG+GGG | + | chr1.2:60046412-60046431 | None:intergenic | 30.0% |
| ! | CTTTATAACAAGAAGCATAC+TGG | - | chr1.2:60045850-60045869 | MS.gene055573:intron | 30.0% |
| ! | CTTTTTATGTTAGTCACCTA+TGG | - | chr1.2:60045244-60045263 | MS.gene055573:intron | 30.0% |
| ! | GACAACTAAAAGAAAAGTGT+TGG | + | chr1.2:60045004-60045023 | None:intergenic | 30.0% |
| ! | TCAAAAGTTATTCTAGAGAG+AGG | - | chr1.2:60047672-60047691 | MS.gene055573:intron | 30.0% |
| ! | TCTTTTCTTCTTTAGGTAAC+CGG | - | chr1.2:60046298-60046317 | MS.gene055573:intron | 30.0% |
| ! | TTTGGAATAATTGTCAGTGA+TGG | - | chr1.2:60047466-60047485 | MS.gene055573:intron | 30.0% |
| !! | AAAGAAAAGTGTTGGGTAAA+AGG | + | chr1.2:60044996-60045015 | None:intergenic | 30.0% |
| !! | AAGAAAAGTGTTGGGTAAAA+GGG | + | chr1.2:60044995-60045014 | None:intergenic | 30.0% |
| !! | CGAGTTTATTTCTAAATCTG+AGG | - | chr1.2:60044411-60044430 | MS.gene055573:intron | 30.0% |
| !!! | ATTTTGTTTCTGTGTGTGTT+AGG | - | chr1.2:60044372-60044391 | MS.gene055573:intron | 30.0% |
| !!! | CATGTTTGGGCTTAATTTTT+TGG | - | chr1.2:60045427-60045446 | MS.gene055573:intron | 30.0% |
| !!! | TTTTGTTTCTGTGTGTGTTA+GGG | - | chr1.2:60044373-60044392 | MS.gene055573:intron | 30.0% |
| AAGGACACCTAGATCAATAA+TGG | + | chr1.2:60045574-60045593 | None:intergenic | 35.0% | |
| AAGTGAGGAAATCATTCCTT+TGG | + | chr1.2:60045828-60045847 | None:intergenic | 35.0% | |
| AATCAGAGGAAAAAGATTGG+GGG | + | chr1.2:60046259-60046278 | None:intergenic | 35.0% | |
| AATCTCTTCCGTGTAGAAAA+GGG | - | chr1.2:60044034-60044053 | MS.gene055573:CDS | 35.0% | |
| ACGTCTTTCTTGATGAAGAA+TGG | + | chr1.2:60045482-60045501 | None:intergenic | 35.0% | |
| AGAATAACTGTCATTGATGG+TGG | - | chr1.2:60047853-60047872 | MS.gene055573:CDS | 35.0% | |
| ATTCTGCAGTTAAACTCTGA+TGG | - | chr1.2:60047616-60047635 | MS.gene055573:CDS | 35.0% | |
| CAAATTGTTTCCATCGTATC+TGG | - | chr1.2:60047051-60047070 | MS.gene055573:intron | 35.0% | |
| CATGTCAAAGACATAACAGT+GGG | + | chr1.2:60046806-60046825 | None:intergenic | 35.0% | |
| CCCTGTATATGTTAGAATCT+CGG | - | chr1.2:60047710-60047729 | MS.gene055573:intron | 35.0% | |
| CCGAGATTCTAACATATACA+GGG | + | chr1.2:60047713-60047732 | None:intergenic | 35.0% | |
| CTAACATAAAAAGCTTCAGC+TGG | + | chr1.2:60045237-60045256 | None:intergenic | 35.0% | |
| CTTAGATAAGCTCAAATCAG+AGG | + | chr1.2:60046273-60046292 | None:intergenic | 35.0% | |
| GAATTTCTAATTTACGGGCT+TGG | + | chr1.2:60047179-60047198 | None:intergenic | 35.0% | |
| GAGTAACCAATACAGAAGAT+AGG | + | chr1.2:60046903-60046922 | None:intergenic | 35.0% | |
| GTAGTCTGTACAATTTGAAC+AGG | + | chr1.2:60047157-60047176 | None:intergenic | 35.0% | |
| GTTCACTCCATTATTGATCT+AGG | - | chr1.2:60045564-60045583 | MS.gene055573:intron | 35.0% | |
| TAATGGAGGGAAGATTATGA+AGG | + | chr1.2:60046693-60046712 | None:intergenic | 35.0% | |
| TCCGAGATTCTAACATATAC+AGG | + | chr1.2:60047714-60047733 | None:intergenic | 35.0% | |
| TGTAAACAGAAGATGAAGAG+AGG | + | chr1.2:60044174-60044193 | None:intergenic | 35.0% | |
| TGTTTCAACTGCAGTAGATA+AGG | - | chr1.2:60045277-60045296 | MS.gene055573:intron | 35.0% | |
| TTAATGCTTACATTCGAGAC+TGG | - | chr1.2:60046172-60046191 | MS.gene055573:intron | 35.0% | |
| TTAGTGCCTATCTTCTGTAT+TGG | - | chr1.2:60046894-60046913 | MS.gene055573:CDS | 35.0% | |
| TTCCTTTGGTTAGACATGTT+TGG | + | chr1.2:60046829-60046848 | None:intergenic | 35.0% | |
| ! | AAAGTTATTCTAGAGAGAGG+AGG | - | chr1.2:60047675-60047694 | MS.gene055573:intron | 35.0% |
| ! | AACCAAGCTCTAATCATGTT+TGG | - | chr1.2:60045413-60045432 | MS.gene055573:intron | 35.0% |
| ! | AAGTTATTCTAGAGAGAGGA+GGG | - | chr1.2:60047676-60047695 | MS.gene055573:intron | 35.0% |
| ! | ACCAAGCTCTAATCATGTTT+GGG | - | chr1.2:60045414-60045433 | MS.gene055573:intron | 35.0% |
| ! | AGAAGTATGATCTAGAAGCA+TGG | - | chr1.2:60047097-60047116 | MS.gene055573:intron | 35.0% |
| ! | CCCCAAATGATAATGATTCA+TGG | - | chr1.2:60046607-60046626 | MS.gene055573:intron | 35.0% |
| ! | CTCTGATTTGAGCTTATCTA+AGG | - | chr1.2:60046271-60046290 | MS.gene055573:intron | 35.0% |
| ! | CTTTTCTTCTTTAGGTAACC+GGG | - | chr1.2:60046299-60046318 | MS.gene055573:intron | 35.0% |
| ! | GAAGTTATTCTAAAGAGAGG+GGG | - | chr1.2:60047283-60047302 | MS.gene055573:intron | 35.0% |
| ! | GAATAACTGTCATTGATGGT+GGG | - | chr1.2:60047854-60047873 | MS.gene055573:CDS | 35.0% |
| ! | GAGATTTGGAATGTGATTCT+GGG | - | chr1.2:60044814-60044833 | MS.gene055573:intron | 35.0% |
| ! | TGAGATTTGGAATGTGATTC+TGG | - | chr1.2:60044813-60044832 | MS.gene055573:intron | 35.0% |
| ! | TTCTTTCTTTTTCTGCTGAC+TGG | - | chr1.2:60047387-60047406 | MS.gene055573:intron | 35.0% |
| ! | TTTTCTTCTTTAGGTAACCG+GGG | - | chr1.2:60046300-60046319 | MS.gene055573:intron | 35.0% |
| !! | ACAGTAGCTATTTGTTTTCG+TGG | - | chr1.2:60044870-60044889 | MS.gene055573:intron | 35.0% |
| !! | AGGAAACTTAGGGCTATTTT+AGG | - | chr1.2:60046074-60046093 | MS.gene055573:intron | 35.0% |
| !! | GAGATAGCTGATTTGAAGAA+AGG | - | chr1.2:60044719-60044738 | MS.gene055573:intron | 35.0% |
| !! | TCCAGCTTCTAAAACATACA+GGG | - | chr1.2:60047122-60047141 | MS.gene055573:intron | 35.0% |
| !! | TTCCAGCTTCTAAAACATAC+AGG | - | chr1.2:60047121-60047140 | MS.gene055573:intron | 35.0% |
| !! | TTCTAAAACATACAGGGAGT+TGG | - | chr1.2:60047128-60047147 | MS.gene055573:intron | 35.0% |
| !!! | CTTAATTTTTTGGCGGAAAG+GGG | - | chr1.2:60045437-60045456 | MS.gene055573:intron | 35.0% |
| !!! | GCTTAATTTTTTGGCGGAAA+GGG | - | chr1.2:60045436-60045455 | MS.gene055573:intron | 35.0% |
| !!! | GTTTGGGCTTAATTTTTTGG+CGG | - | chr1.2:60045430-60045449 | MS.gene055573:intron | 35.0% |
| AAACAGAAGATGAAGAGAGG+AGG | + | chr1.2:60044171-60044190 | None:intergenic | 40.0% | |
| AACCGAACAATGAAGCCAAA+GGG | - | chr1.2:60048230-60048249 | MS.gene055573:CDS | 40.0% | |
| AAGACATGTTAGTGATGCCT+CGG | - | chr1.2:60045610-60045629 | MS.gene055573:intron | 40.0% | |
| AATTCGATACGGACAGAAGA+AGG | - | chr1.2:60047194-60047213 | MS.gene055573:intron | 40.0% | |
| ACAAACCTCATCATTGCTGA+TGG | + | chr1.2:60044542-60044561 | None:intergenic | 40.0% | |
| ACAACACCTCCATCTCTTAA+TGG | + | chr1.2:60046710-60046729 | None:intergenic | 40.0% | |
| ATACTTATCATCTCCTTCCC+CGG | + | chr1.2:60046320-60046339 | None:intergenic | 40.0% | |
| ATCAGAGGAAAAAGATTGGG+GGG | + | chr1.2:60046258-60046277 | None:intergenic | 40.0% | |
| ATCATGAACGAGGTTTCCAA+TGG | + | chr1.2:60044512-60044531 | None:intergenic | 40.0% | |
| ATCTTCCCTCCATTAAGAGA+TGG | - | chr1.2:60046698-60046717 | MS.gene055573:intron | 40.0% | |
| CAAACCTCATCATTGCTGAT+GGG | + | chr1.2:60044541-60044560 | None:intergenic | 40.0% | |
| CAAAGAAGCTATCTTTGTCG+TGG | + | chr1.2:60045776-60045795 | None:intergenic | 40.0% | |
| CAATCTCTTCCGTGTAGAAA+AGG | - | chr1.2:60044033-60044052 | MS.gene055573:CDS | 40.0% | |
| CATACTAGAGAACAACCAGA+AGG | - | chr1.2:60048135-60048154 | MS.gene055573:intron | 40.0% | |
| GAAACACAACAGTGTTCCAT+AGG | + | chr1.2:60045263-60045282 | None:intergenic | 40.0% | |
| GAGATTCACGGATGATTTCA+GGG | + | chr1.2:60044066-60044085 | None:intergenic | 40.0% | |
| GATTGCTGAAAAAGAGGTTG+AGG | - | chr1.2:60044447-60044466 | MS.gene055573:intron | 40.0% | |
| GCATGTCAAAGACATAACAG+TGG | + | chr1.2:60046807-60046826 | None:intergenic | 40.0% | |
| GGAAATGCTCAAAAACTCTG+AGG | - | chr1.2:60046641-60046660 | MS.gene055573:intron | 40.0% | |
| GGAATAATTGTCAGTGATGG+CGG | - | chr1.2:60047469-60047488 | MS.gene055573:intron | 40.0% | |
| GGTAGAGGTTTCTATCTCAA+AGG | - | chr1.2:60045374-60045393 | MS.gene055573:intron | 40.0% | |
| GGTTTCTATCTCAAAGGAGA+TGG | - | chr1.2:60045380-60045399 | MS.gene055573:intron | 40.0% | |
| GTGCATATCATTCAGACGAA+TGG | - | chr1.2:60046368-60046387 | MS.gene055573:intron | 40.0% | |
| GTTCTCTAGTATGCAGCAAA+TGG | + | chr1.2:60048128-60048147 | None:intergenic | 40.0% | |
| TACTTGACAGTGTCCAGATT+CGG | + | chr1.2:60045109-60045128 | None:intergenic | 40.0% | |
| TAGAGATACCAGAAGTCCTT+AGG | - | chr1.2:60048167-60048186 | MS.gene055573:CDS | 40.0% | |
| TAGATCATACTTCTTAGCCG+CGG | + | chr1.2:60047091-60047110 | None:intergenic | 40.0% | |
| TATGCTTACTCGCTTGAGTT+TGG | + | chr1.2:60044296-60044315 | None:intergenic | 40.0% | |
| TCCACATGATTCTTGAGCTT+CGG | + | chr1.2:60044683-60044702 | None:intergenic | 40.0% | |
| TCTGAATGATATGCACACAG+AGG | + | chr1.2:60046364-60046383 | None:intergenic | 40.0% | |
| TCTTGCTTTCGTAAAGAAGC+TGG | - | chr1.2:60046510-60046529 | MS.gene055573:intron | 40.0% | |
| TGAGATTCACGGATGATTTC+AGG | + | chr1.2:60044067-60044086 | None:intergenic | 40.0% | |
| TGCCAAACATGTCTAACCAA+AGG | - | chr1.2:60046824-60046843 | MS.gene055573:CDS | 40.0% | |
| TTCCAAACATGAATGGCCTA+AGG | + | chr1.2:60048186-60048205 | None:intergenic | 40.0% | |
| TTTGTTGAACTCCACTCTCA+CGG | - | chr1.2:60048090-60048109 | MS.gene055573:intron | 40.0% | |
| ! | AATCTTGTTGTCCGAACATG+GGG | - | chr1.2:60044641-60044660 | MS.gene055573:intron | 40.0% |
| ! | ACAATCTTGTTGTCCGAACA+TGG | - | chr1.2:60044639-60044658 | MS.gene055573:intron | 40.0% |
| ! | AGTTATTCTAGAGAGAGGAG+GGG | - | chr1.2:60047677-60047696 | MS.gene055573:intron | 40.0% |
| ! | CAATCTTGTTGTCCGAACAT+GGG | - | chr1.2:60044640-60044659 | MS.gene055573:intron | 40.0% |
| ! | TAACAAGAAGCATACTGGCA+TGG | - | chr1.2:60045855-60045874 | MS.gene055573:intron | 40.0% |
| ! | TCAATGTATGGTGGGGTTAA+GGG | - | chr1.2:60044945-60044964 | MS.gene055573:intron | 40.0% |
| ! | TTCAATGTATGGTGGGGTTA+AGG | - | chr1.2:60044944-60044963 | MS.gene055573:intron | 40.0% |
| ! | TTCCCTTTGGCTTCATTGTT+CGG | + | chr1.2:60048235-60048254 | None:intergenic | 40.0% |
| ! | TTGTTCGGTTGGTTCTTGAA+TGG | + | chr1.2:60048220-60048239 | None:intergenic | 40.0% |
| !!! | CGTGGTAGCTAGTCTTTTTT+TGG | - | chr1.2:60044888-60044907 | MS.gene055573:intron | 40.0% |
| !!! | GGCTTAATTTTTTGGCGGAA+AGG | - | chr1.2:60045435-60045454 | MS.gene055573:intron | 40.0% |
| !!! | TCCCTGTATGTTTTAGAAGC+TGG | + | chr1.2:60047126-60047145 | None:intergenic | 40.0% |
| AAAAGACCAGTCAGCAGAGA+AGG | + | chr1.2:60047782-60047801 | None:intergenic | 45.0% | |
| AAGAAGCTGGATCTCATGGT+CGG | - | chr1.2:60046523-60046542 | MS.gene055573:intron | 45.0% | |
| AAGTTACCTTAGGGGTAGAC+GGG | + | chr1.2:60046404-60046423 | None:intergenic | 45.0% | |
| ACACCTCCATCTCTTAATGG+AGG | + | chr1.2:60046707-60046726 | None:intergenic | 45.0% | |
| ACCGAAGCTCAAGAATCATG+TGG | - | chr1.2:60044679-60044698 | MS.gene055573:intron | 45.0% | |
| ACTAGAGAACAACCAGAAGG+AGG | - | chr1.2:60048138-60048157 | MS.gene055573:CDS | 45.0% | |
| ACTTGACAGTGTCCAGATTC+GGG | + | chr1.2:60045108-60045127 | None:intergenic | 45.0% | |
| AGCCAAAGGGAAGAAATCGA+AGG | - | chr1.2:60048243-60048262 | MS.gene055573:CDS | 45.0% | |
| ATGAATGGCCTAAGGACTTC+TGG | + | chr1.2:60048178-60048197 | None:intergenic | 45.0% | |
| ATGCTTACATTCGAGACTGG+AGG | - | chr1.2:60046175-60046194 | MS.gene055573:intron | 45.0% | |
| ATTCTTCCTTCTCTGCTGAC+TGG | - | chr1.2:60047773-60047792 | MS.gene055573:CDS | 45.0% | |
| CAACCGAACAATGAAGCCAA+AGG | - | chr1.2:60048229-60048248 | MS.gene055573:CDS | 45.0% | |
| CAAGTTACCTTAGGGGTAGA+CGG | + | chr1.2:60046405-60046424 | None:intergenic | 45.0% | |
| CACCTCCATCTCTTAATGGA+GGG | + | chr1.2:60046706-60046725 | None:intergenic | 45.0% | |
| CGTAAAGAAGCTGGATCTCA+TGG | - | chr1.2:60046519-60046538 | MS.gene055573:intron | 45.0% | |
| GCCCAAACATGATTAGAGCT+TGG | + | chr1.2:60045418-60045437 | None:intergenic | 45.0% | |
| GCTCTGCAACAGGATAAAAG+AGG | + | chr1.2:60048044-60048063 | None:intergenic | 45.0% | |
| GTCCTTAGGCCATTCATGTT+TGG | - | chr1.2:60048181-60048200 | MS.gene055573:CDS | 45.0% | |
| GTTCAAAGCTCCAGATACGA+TGG | + | chr1.2:60047064-60047083 | None:intergenic | 45.0% | |
| TCTCATGGTCGGGATACTTT+AGG | - | chr1.2:60046534-60046553 | MS.gene055573:intron | 45.0% | |
| TGAAAAAGAGGTTGAGGCTC+AGG | - | chr1.2:60044453-60044472 | MS.gene055573:intron | 45.0% | |
| TGATTCATGGGACATGCATG+AGG | - | chr1.2:60046620-60046639 | MS.gene055573:intron | 45.0% | |
| TGCTTACATTCGAGACTGGA+GGG | - | chr1.2:60046176-60046195 | MS.gene055573:intron | 45.0% | |
| TGGGAACAGAATCATGAACG+AGG | + | chr1.2:60044522-60044541 | None:intergenic | 45.0% | |
| TGTTCCCATCAGCAATGATG+AGG | - | chr1.2:60044534-60044553 | MS.gene055573:intron | 45.0% | |
| TTCCCTCCATTAAGAGATGG+AGG | - | chr1.2:60046701-60046720 | MS.gene055573:intron | 45.0% | |
| TTGGAATGTGATTCTGGGTC+AGG | - | chr1.2:60044819-60044838 | MS.gene055573:intron | 45.0% | |
| ! | CTCTGAGGACTTCTACAAAG+CGG | - | chr1.2:60046656-60046675 | MS.gene055573:intron | 45.0% |
| ! | CTCTTTTCTCACCCCATGTT+CGG | + | chr1.2:60044655-60044674 | None:intergenic | 45.0% |
| ! | CTTTGGCTTCATTGTTCGGT+TGG | + | chr1.2:60048231-60048250 | None:intergenic | 45.0% |
| ! | GGTTGTGACCCTTTTCTACA+CGG | + | chr1.2:60044045-60044064 | None:intergenic | 45.0% |
| ! | TGTTTCTGTGTGTGTTAGGG+TGG | - | chr1.2:60044376-60044395 | MS.gene055573:intron | 45.0% |
| !! | AAAATAAAAAATAAAAAAGA+GGG | + | chr1.2:60046982-60047001 | None:intergenic | 5.0% |
| !!! | TATATTATATAATATAGTTT+TGG | - | chr1.2:60046737-60046756 | MS.gene055573:intron | 5.0% |
| ACCTCTACCTCCAGCAACAT+CGG | + | chr1.2:60045363-60045382 | None:intergenic | 50.0% | |
| ACTGCTCATTGCTCTGCAAC+AGG | + | chr1.2:60048054-60048073 | None:intergenic | 50.0% | |
| AGAAGCTGGATCTCATGGTC+GGG | - | chr1.2:60046524-60046543 | MS.gene055573:intron | 50.0% | |
| AGCATACTGGCATGGTGCAA+TGG | - | chr1.2:60045863-60045882 | MS.gene055573:intron | 50.0% | |
| AGTGTCCAGATTCGGGATAG+TGG | + | chr1.2:60045101-60045120 | None:intergenic | 50.0% | |
| AGTTCACCAGTTCGAGAAGG+TGG | - | chr1.2:60046566-60046585 | MS.gene055573:intron | 50.0% | |
| ATACTGGCATGGTGCAATGG+TGG | - | chr1.2:60045866-60045885 | MS.gene055573:intron | 50.0% | |
| ATGATAGGAGCCGATGTTGC+TGG | - | chr1.2:60045350-60045369 | MS.gene055573:intron | 50.0% | |
| CCTTCTCGAACTGGTGAACT+CGG | + | chr1.2:60046566-60046585 | None:intergenic | 50.0% | |
| CTTCTTTAGGTAACCGGGGA+AGG | - | chr1.2:60046304-60046323 | MS.gene055573:intron | 50.0% | |
| GAGAACAACCAGAAGGAGGA+TGG | - | chr1.2:60048142-60048161 | MS.gene055573:CDS | 50.0% | |
| GGCCTTCGATTTCTTCCCTT+TGG | + | chr1.2:60048248-60048267 | None:intergenic | 50.0% | |
| TCTCTACTCCATCCTCCTTC+TGG | + | chr1.2:60048153-60048172 | None:intergenic | 50.0% | |
| TGTGATTCTGGGTCAGGATG+TGG | - | chr1.2:60044825-60044844 | MS.gene055573:intron | 50.0% | |
| TTCGTCAACTACTTCGACGC+TGG | + | chr1.2:60044104-60044123 | None:intergenic | 50.0% | |
| TTCTGCCACTATCCCGAATC+TGG | - | chr1.2:60045093-60045112 | MS.gene055573:CDS | 50.0% | |
| ! | AACGACGGCGTTGAGATTCA+CGG | + | chr1.2:60044078-60044097 | None:intergenic | 50.0% |
| ! | TCGGTTGGTTCTTGAATGGC+AGG | + | chr1.2:60048216-60048235 | None:intergenic | 50.0% |
| !! | CATGCTTGCTGTAGGTATGC+TGG | - | chr1.2:60046480-60046499 | MS.gene055573:intron | 50.0% |
| !! | CTTGGGAACATGCTTGCTGT+AGG | - | chr1.2:60046472-60046491 | MS.gene055573:intron | 50.0% |
| !! | TTGGGCTAGTTGAGCACACT+TGG | + | chr1.2:60045510-60045529 | None:intergenic | 50.0% |
| ACTGCTCCACCTTCTCGAAC+TGG | + | chr1.2:60046575-60046594 | None:intergenic | 55.0% | |
| ATAGGAGCCGATGTTGCTGG+AGG | - | chr1.2:60045353-60045372 | MS.gene055573:intron | 55.0% | |
| ATCCTACCCGTCTACCCCTA+AGG | - | chr1.2:60046395-60046414 | MS.gene055573:intron | 55.0% | |
| CCGAGTTCACCAGTTCGAGA+AGG | - | chr1.2:60046563-60046582 | MS.gene055573:intron | 55.0% | |
| CTTCGACGCTGGCAAAACGA+CGG | + | chr1.2:60044093-60044112 | None:intergenic | 55.0% | |
| GAACTCCACTCTCACGGCTA+CGG | - | chr1.2:60048096-60048115 | MS.gene055573:intron | 55.0% | |
| TACCTTAGGGGTAGACGGGT+AGG | + | chr1.2:60046400-60046419 | None:intergenic | 55.0% | |
| TTAGGGGTAGACGGGTAGGA+TGG | + | chr1.2:60046396-60046415 | None:intergenic | 55.0% | |
| !! | TGGAGCTTTGAACGATGCCG+CGG | - | chr1.2:60047071-60047090 | MS.gene055573:intron | 55.0% |
| CCACTCTCACGGCTACGGAA+AGG | - | chr1.2:60048101-60048120 | MS.gene055573:intron | 60.0% | |
| CCTTTCCGTAGCCGTGAGAG+TGG | + | chr1.2:60048104-60048123 | None:intergenic | 60.0% | |
| GCCGATGTTGCTGGAGGTAG+AGG | - | chr1.2:60045359-60045378 | MS.gene055573:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 60044022 | 60048270 | 60044022 | ID=MS.gene055573 |
| chr1.2 | mRNA | 60044022 | 60048270 | 60044022 | ID=MS.gene055573.t1;Parent=MS.gene055573 |
| chr1.2 | exon | 60048138 | 60048270 | 60048138 | ID=MS.gene055573.t1.exon1;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60048138 | 60048270 | 60048138 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60047986 | 60048056 | 60047986 | ID=MS.gene055573.t1.exon2;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60047986 | 60048056 | 60047986 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60047737 | 60047898 | 60047737 | ID=MS.gene055573.t1.exon3;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60047737 | 60047898 | 60047737 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60047552 | 60047657 | 60047552 | ID=MS.gene055573.t1.exon4;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60047552 | 60047657 | 60047552 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60046742 | 60046935 | 60046742 | ID=MS.gene055573.t1.exon5;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60046742 | 60046935 | 60046742 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60045876 | 60045979 | 60045876 | ID=MS.gene055573.t1.exon6;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60045876 | 60045979 | 60045876 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60045615 | 60045798 | 60045615 | ID=MS.gene055573.t1.exon7;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60045615 | 60045798 | 60045615 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60045077 | 60045256 | 60045077 | ID=MS.gene055573.t1.exon8;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60045077 | 60045256 | 60045077 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| chr1.2 | exon | 60044022 | 60044231 | 60044022 | ID=MS.gene055573.t1.exon9;Parent=MS.gene055573.t1 |
| chr1.2 | CDS | 60044022 | 60044231 | 60044022 | ID=cds.MS.gene055573.t1;Parent=MS.gene055573.t1 |
| Gene Sequence |
| Protein sequence |
