Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26507.t1 | XP_013458419.1 | 96.2 | 970 | 37 | 0 | 36 | 1005 | 32 | 1001 | 0.00E+00 | 1247.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26507.t1 | Q6NXD8 | 31.1 | 119 | 76 | 2 | 809 | 921 | 304 | 422 | 3.4e-08 | 62.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26507.t1 | A0A072V2V8 | 96.2 | 970 | 37 | 0 | 36 | 1005 | 32 | 1001 | 0.0e+00 | 1247.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051817 | MS.gene26507 | 0.988575 | 1.46E-174 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26507.t1 | MTR_4g125480 | 94.036 | 1006 | 54 | 3 | 1 | 1005 | 1 | 1001 | 0.0 | 1930 |
| MS.gene26507.t1 | MTR_4g125480 | 93.909 | 985 | 54 | 3 | 1 | 984 | 1 | 980 | 0.0 | 1887 |
| MS.gene26507.t1 | MTR_4g125480 | 91.980 | 985 | 53 | 4 | 1 | 984 | 1 | 960 | 0.0 | 1836 |
| MS.gene26507.t1 | MTR_2g041470 | 74.941 | 427 | 105 | 2 | 580 | 1005 | 357 | 782 | 0.0 | 656 |
| MS.gene26507.t1 | MTR_2g041470 | 67.327 | 404 | 119 | 4 | 7 | 402 | 25 | 423 | 6.07e-168 | 513 |
| MS.gene26507.t1 | MTR_2g041470 | 67.494 | 403 | 118 | 4 | 7 | 401 | 25 | 422 | 2.39e-168 | 513 |
| MS.gene26507.t1 | MTR_2g041470 | 70.769 | 325 | 93 | 2 | 580 | 903 | 357 | 680 | 1.29e-150 | 466 |
| MS.gene26507.t1 | MTR_7g099030 | 48.936 | 329 | 161 | 3 | 694 | 1022 | 501 | 822 | 3.50e-88 | 301 |
| MS.gene26507.t1 | MTR_7g099030 | 42.125 | 273 | 151 | 3 | 27 | 293 | 67 | 338 | 7.96e-59 | 218 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26507.t1 | AT5G35560 | 63.918 | 388 | 123 | 4 | 620 | 1005 | 345 | 717 | 6.63e-164 | 500 |
| MS.gene26507.t1 | AT5G35560 | 61.786 | 280 | 95 | 4 | 17 | 294 | 42 | 311 | 1.47e-107 | 352 |
| MS.gene26507.t1 | AT5G35560 | 63.918 | 388 | 123 | 4 | 620 | 1005 | 371 | 743 | 1.25e-163 | 501 |
| MS.gene26507.t1 | AT5G35560 | 61.786 | 280 | 95 | 4 | 17 | 294 | 42 | 311 | 2.20e-107 | 352 |
| MS.gene26507.t1 | AT2G20320 | 50.667 | 300 | 141 | 3 | 708 | 1005 | 711 | 1005 | 2.29e-90 | 312 |
| MS.gene26507.t1 | AT2G20320 | 42.279 | 272 | 147 | 4 | 29 | 293 | 280 | 548 | 7.55e-62 | 229 |
| MS.gene26507.t1 | AT2G20320 | 50.667 | 300 | 141 | 3 | 708 | 1005 | 711 | 1005 | 2.29e-90 | 312 |
| MS.gene26507.t1 | AT2G20320 | 42.279 | 272 | 147 | 4 | 29 | 293 | 280 | 548 | 7.55e-62 | 229 |
Find 239 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGACAATTCAACACTTTA+TGG | 0.115504 | 8.1:-6715550 | MS.gene26507:CDS |
| CCGATCTTCTAATTCTTTAT+TGG | 0.135191 | 8.1:+6713438 | None:intergenic |
| ATGACAGATCCATTTGTTTA+AGG | 0.146395 | 8.1:+6715714 | None:intergenic |
| TTGAGAGCAGTGAGGATTTC+AGG | 0.206301 | 8.1:+6717411 | None:intergenic |
| GTCATTTGTATTCAGGTTAC+AGG | 0.228632 | 8.1:-6715696 | MS.gene26507:intron |
| TGGATCTGTCATTTGTATTC+AGG | 0.234584 | 8.1:-6715703 | MS.gene26507:CDS |
| ATAAGAATACTCACTATATA+AGG | 0.235466 | 8.1:+6710378 | None:intergenic |
| TTCGGTGTTGAGGTCTTATC+TGG | 0.238265 | 8.1:-6709153 | MS.gene26507:CDS |
| ACCGGATTGGTTGTCCTTCC+AGG | 0.252367 | 8.1:-6712631 | MS.gene26507:CDS |
| AGTTGTTGCCTGCTCTAATT+TGG | 0.255522 | 8.1:-6711349 | MS.gene26507:intron |
| CCACTATCTTCAGAAATTCT+AGG | 0.263141 | 8.1:+6713631 | None:intergenic |
| TCACTATCTTCAGAAATTAT+AGG | 0.264701 | 8.1:+6714216 | None:intergenic |
| AACTGTAGGGCCAGGTTCTT+TGG | 0.269822 | 8.1:+6714086 | None:intergenic |
| TCTTCTTCTTCTTTAGTCAT+TGG | 0.272784 | 8.1:+6717597 | None:intergenic |
| AGTTCCTGAACATCACAATT+AGG | 0.284358 | 8.1:+6717105 | None:intergenic |
| ATCACTTACATTTCATCCTT+TGG | 0.288504 | 8.1:-6712603 | MS.gene26507:CDS |
| GCAGCTGCCCGTCAACTATT+TGG | 0.292722 | 8.1:+6713740 | None:intergenic |
| TGTTGGTTTCACAGGGTTAT+AGG | 0.294641 | 8.1:-6717182 | MS.gene26507:intron |
| CAGTACCTGAGGTTCAATAT+TGG | 0.300865 | 8.1:+6716996 | None:intergenic |
| TGGAGAACTTCAGTCTTATA+AGG | 0.303705 | 8.1:-6714166 | MS.gene26507:CDS |
| TGCACTTTGGTGTATTAAAT+AGG | 0.308629 | 8.1:-6715375 | MS.gene26507:intron |
| CTTCTTTCTTTCTGTTTCCC+TGG | 0.313717 | 8.1:-6716728 | MS.gene26507:CDS |
| TCTAGGGAAAGATTCTTCTA+TGG | 0.316438 | 8.1:+6713648 | None:intergenic |
| TGTAGTGCCAGATTCTTCTT+TGG | 0.319307 | 8.1:+6713942 | None:intergenic |
| AAATTATATGCGAGTATTAC+CGG | 0.320510 | 8.1:-6712649 | MS.gene26507:CDS |
| GATGTTACTGCATTCTTTCA+AGG | 0.321969 | 8.1:-6715414 | MS.gene26507:CDS |
| AGATTCTTCTTTGGCTGCTT+CGG | 0.325461 | 8.1:+6713951 | None:intergenic |
| CGGGCAGCTGCATCCTTATA+AGG | 0.328318 | 8.1:-6713728 | MS.gene26507:CDS |
| TGTACGGCAAGGTTCTTCTT+TGG | 0.336203 | 8.1:+6713795 | None:intergenic |
| ACTTTATGGGTGTTGTGTTT+TGG | 0.340075 | 8.1:-6715536 | MS.gene26507:CDS |
| AGTACCTGAGGTTCAATATT+GGG | 0.340930 | 8.1:+6716997 | None:intergenic |
| CCTTATCACGCAGCTCTTGT+AGG | 0.343628 | 8.1:-6709486 | MS.gene26507:CDS |
| TAATCTATTCTCTCCTTATA+AGG | 0.343634 | 8.1:+6713715 | None:intergenic |
| CTGACAATTCAACACTTTAT+GGG | 0.346432 | 8.1:-6715549 | MS.gene26507:CDS |
| GCAGCTCTCCATCAACTATT+AGG | 0.347447 | 8.1:+6714325 | None:intergenic |
| TGGAGAGCTGCGGTCATATA+AGG | 0.348818 | 8.1:-6714313 | MS.gene26507:CDS |
| AGCTGCAAAGGGGTTTCTTT+CGG | 0.351895 | 8.1:-6709171 | MS.gene26507:CDS |
| TCACCCTAATTGTGATGTTC+AGG | 0.360223 | 8.1:-6717109 | MS.gene26507:CDS |
| CCTGAGAACCTAATAGTTGA+TGG | 0.361614 | 8.1:-6714333 | MS.gene26507:CDS |
| CTTGGCAGTTGTGGTATTGT+TGG | 0.362762 | 8.1:+6709537 | None:intergenic |
| TGAAGATAGTGGTGGTCATC+TGG | 0.362819 | 8.1:-6713620 | MS.gene26507:CDS |
| TTTCTGTTTCCCTGGAGGCT+TGG | 0.364156 | 8.1:-6716720 | MS.gene26507:CDS |
| TGGAGAGATACAGTCATATA+AGG | 0.366811 | 8.1:-6713875 | MS.gene26507:CDS |
| TTATCAGTTTCATGCTTAGT+AGG | 0.367671 | 8.1:+6713679 | None:intergenic |
| CCATCAACTATTAGGTTCTC+AGG | 0.368919 | 8.1:+6714333 | None:intergenic |
| CACTATCTTCAGAAATTATA+GGG | 0.380078 | 8.1:+6714217 | None:intergenic |
| AGAAGATCCTTGCATTTAAG+AGG | 0.384174 | 8.1:+6716746 | None:intergenic |
| ACGATTCAGAGCTTTCATAC+TGG | 0.387340 | 8.1:+6713377 | None:intergenic |
| CCATCTGCCATTAGGTTCTC+CGG | 0.393418 | 8.1:+6713895 | None:intergenic |
| CACTGCTCTCAAGCGTCAAT+GGG | 0.396144 | 8.1:-6717400 | MS.gene26507:CDS |
| CCTACAAGAGCTGCGTGATA+AGG | 0.400743 | 8.1:+6709486 | None:intergenic |
| GTATCTCTCCATCTGCCATT+AGG | 0.402200 | 8.1:+6713887 | None:intergenic |
| CCGTCAACTATTTGGTTCTC+CGG | 0.403550 | 8.1:+6713748 | None:intergenic |
| CTGGAGAATGCAATGGTTGA+TGG | 0.404044 | 8.1:-6713601 | MS.gene26507:CDS |
| GAAGTTCTCCAACAACCATT+AGG | 0.405095 | 8.1:+6714178 | None:intergenic |
| CTGTTTCCCTGGAGGCTTGG+AGG | 0.408696 | 8.1:-6716717 | MS.gene26507:intron |
| TCACTGCTCTCAAGCGTCAA+TGG | 0.411870 | 8.1:-6717401 | MS.gene26507:CDS |
| TGCATAGGCAATTTGTTGAT+AGG | 0.412840 | 8.1:-6717083 | MS.gene26507:CDS |
| TATAGGGCCAGATTCTTCAT+TGG | 0.414422 | 8.1:+6714233 | None:intergenic |
| CTACTGAGCATGAAACTGAT+AGG | 0.419168 | 8.1:-6713825 | MS.gene26507:CDS |
| TTCGAAAGCATGGTGGTTGT+TGG | 0.419586 | 8.1:-6717135 | MS.gene26507:CDS |
| ACTTAAATGATATTCTTGAA+TGG | 0.419604 | 8.1:-6712788 | MS.gene26507:CDS |
| TTAAGTCATTTAAATTCTCT+TGG | 0.421502 | 8.1:+6712805 | None:intergenic |
| CAGTCTTATAAGGACAGAAT+AGG | 0.422776 | 8.1:-6714156 | MS.gene26507:CDS |
| GATATTAGCTCTTTCTGTCT+TGG | 0.423417 | 8.1:+6709519 | None:intergenic |
| TAACATTGGTAAACTTTGAC+TGG | 0.428914 | 8.1:+6709988 | None:intergenic |
| CTACAAGAGCTGCGTGATAA+GGG | 0.433410 | 8.1:+6709487 | None:intergenic |
| TCTGAAGACAATGATCAGTA+TGG | 0.434045 | 8.1:-6713475 | MS.gene26507:CDS |
| CCTAGAATTTCTGAAGATAG+TGG | 0.434304 | 8.1:-6713631 | MS.gene26507:CDS |
| GTTCCTGAACATCACAATTA+GGG | 0.435119 | 8.1:+6717106 | None:intergenic |
| TTTGGAGCACCTGCATCCCT+TGG | 0.438368 | 8.1:-6712585 | MS.gene26507:CDS |
| ATCTTCTAATTCTTTATTGG+TGG | 0.438856 | 8.1:+6713441 | None:intergenic |
| CCAACAACCATTAGGTTCTC+CGG | 0.441190 | 8.1:+6714186 | None:intergenic |
| TCAAGTTACTAAATTGTTCA+AGG | 0.442467 | 8.1:-6717472 | MS.gene26507:CDS |
| CCGGAGAACCTAATGGTTGT+TGG | 0.442593 | 8.1:-6714186 | MS.gene26507:CDS |
| TGGACTACTGCTTGCTTATG+TGG | 0.443811 | 8.1:-6712286 | MS.gene26507:CDS |
| CTTAAATGATATTCTTGAAT+GGG | 0.444172 | 8.1:-6712787 | MS.gene26507:CDS |
| GAAGCAGCCAAAGAAGAATC+TGG | 0.445818 | 8.1:-6713949 | MS.gene26507:CDS |
| GAAAAGTTGCAGTACCGGTC+TGG | 0.446659 | 8.1:-6712507 | MS.gene26507:CDS |
| GCAGGTCTCCATCAACCATT+AGG | 0.449721 | 8.1:+6714034 | None:intergenic |
| CCGGATTGGTTGTCCTTCCA+GGG | 0.449866 | 8.1:-6712630 | MS.gene26507:CDS |
| CGATTCAGAGCTTTCATACT+GGG | 0.451992 | 8.1:+6713378 | None:intergenic |
| CTACAGATTGGAGCTGCAAA+GGG | 0.455645 | 8.1:-6709182 | MS.gene26507:intron |
| GCAGGAACACCTTAAACAAA+TGG | 0.458315 | 8.1:-6715723 | MS.gene26507:intron |
| CTACGACGAATATTAGCAAT+AGG | 0.464254 | 8.1:-6706492 | MS.gene26507:CDS |
| TCAACGGCCAATGAAGAATC+TGG | 0.464288 | 8.1:-6714240 | MS.gene26507:CDS |
| CAGGTGAACCTAATGGTTGA+TGG | 0.464377 | 8.1:-6714042 | MS.gene26507:CDS |
| AGCAGGCTTTGCCATCGATA+AGG | 0.465137 | 8.1:+6710556 | None:intergenic |
| TCGACATCTGAAAACATTGT+TGG | 0.466403 | 8.1:-6714366 | MS.gene26507:CDS |
| CACCTAACCTCCAAGCCTCC+AGG | 0.466727 | 8.1:+6716710 | None:intergenic |
| TTGGAATATCATAGACCATC+CGG | 0.470147 | 8.1:-6712566 | MS.gene26507:CDS |
| ACAACAGCAAAAGAAGAATC+TGG | 0.471224 | 8.1:-6713508 | MS.gene26507:CDS |
| GATACTGCAACCTTTGAAGT+TGG | 0.478141 | 8.1:+6717493 | None:intergenic |
| TGTACAATCAAATGACGATA+AGG | 0.478142 | 8.1:-6709090 | MS.gene26507:intron |
| ATTCTTAGCAGGAATTCTGC+TGG | 0.483107 | 8.1:-6711382 | MS.gene26507:CDS |
| TCATTGTCTTCAGAAATTGT+AGG | 0.483670 | 8.1:+6713484 | None:intergenic |
| TAAGAATACTCACTATATAA+GGG | 0.485316 | 8.1:+6710379 | None:intergenic |
| GGCTTTGCCATCGATAAGGC+TGG | 0.485441 | 8.1:+6710560 | None:intergenic |
| AGGCAACTTCGTTATCTGTA+TGG | 0.486973 | 8.1:-6712306 | MS.gene26507:CDS |
| AATTTCATTCAACTCACTCA+TGG | 0.487854 | 8.1:+6716067 | None:intergenic |
| GAACTAGTGCAAAAGCCCTC+TGG | 0.488144 | 8.1:-6715508 | MS.gene26507:CDS |
| AAACTTTGACTGGACTTCAC+TGG | 0.488522 | 8.1:+6709998 | None:intergenic |
| GATTTGAAAAGTTGCAGTAC+CGG | 0.488753 | 8.1:-6712512 | MS.gene26507:CDS |
| TGGAGACCTGCAGTCTCATA+AGG | 0.491106 | 8.1:-6714022 | MS.gene26507:CDS |
| TCAAATTTAGAATTTGTTGA+AGG | 0.492252 | 8.1:-6714504 | MS.gene26507:CDS |
| TTTCACAGGGTTATAGGTCG+TGG | 0.492407 | 8.1:-6717176 | MS.gene26507:intron |
| GGGACAGTCCTGTGTCGTAC+TGG | 0.492408 | 8.1:-6712545 | MS.gene26507:CDS |
| CTCACGGCTGTTCGAAAGCA+TGG | 0.494790 | 8.1:-6717145 | MS.gene26507:CDS |
| CATTGTCTTCAGAAATTGTA+GGG | 0.497709 | 8.1:+6713485 | None:intergenic |
| CCCTGGAAGGACAACCAATC+CGG | 0.498435 | 8.1:+6712630 | None:intergenic |
| CGTCAACTATTTGGTTCTCC+GGG | 0.501380 | 8.1:+6713749 | None:intergenic |
| TTATTGTGGTTGATGCCAAC+AGG | 0.502457 | 8.1:-6709968 | MS.gene26507:CDS |
| TATGATATTCCAAGGGATGC+AGG | 0.505823 | 8.1:+6712576 | None:intergenic |
| TGAAAGGCCGATCGCGATGC+GGG | 0.506734 | 8.1:+6707926 | None:intergenic |
| TGTCCTATCAATTTCATGCT+CGG | 0.509586 | 8.1:+6713528 | None:intergenic |
| CAGGTGTTAACATTCTTAGC+AGG | 0.509682 | 8.1:-6711393 | MS.gene26507:CDS |
| CATTCAACTCACTCATGGAA+GGG | 0.509870 | 8.1:+6716072 | None:intergenic |
| GCTCATTCCCGCATCGCGAT+CGG | 0.510279 | 8.1:-6707933 | MS.gene26507:CDS |
| TCTTGTAGGAGAAAGTTACT+TGG | 0.510737 | 8.1:-6709472 | MS.gene26507:CDS |
| GAACTCAAACTGTCATTAGC+AGG | 0.510770 | 8.1:+6710539 | None:intergenic |
| AGGGGTTTCTTTCGGTGTTG+AGG | 0.511421 | 8.1:-6709163 | MS.gene26507:CDS |
| TGGAGAGTTGGAGCCTTACA+AGG | 0.512953 | 8.1:-6713581 | MS.gene26507:CDS |
| ATATGCGAGTATTACCGGAT+TGG | 0.514796 | 8.1:-6712644 | MS.gene26507:CDS |
| AAAGCTCTGAATCGTCCTGC+AGG | 0.515801 | 8.1:-6713369 | MS.gene26507:intron |
| CACTATCTTCAGAAATTCTA+GGG | 0.517423 | 8.1:+6713632 | None:intergenic |
| CACTATCTTCAGAAATTGTA+CGG | 0.519878 | 8.1:+6713779 | None:intergenic |
| CCTACAGATTGGAGCTGCAA+AGG | 0.520536 | 8.1:-6709183 | MS.gene26507:intron |
| GAGAAGCTGACGAAGAGCGT+TGG | 0.520783 | 8.1:-6714531 | MS.gene26507:CDS |
| TTCTCTCCTTATGAGACTGC+AGG | 0.521189 | 8.1:+6714016 | None:intergenic |
| TCACTATCTTCAGAAACTGT+AGG | 0.523218 | 8.1:+6714072 | None:intergenic |
| TCTTTCTGTCTTGGCAGTTG+TGG | 0.523888 | 8.1:+6709528 | None:intergenic |
| CTTTCTTTCTGTTTCCCTGG+AGG | 0.524994 | 8.1:-6716725 | MS.gene26507:CDS |
| TCGCGATCGGCCTTTCATGA+AGG | 0.527167 | 8.1:-6707920 | MS.gene26507:intron |
| AGCGTAGAAGCCAAAGAACC+TGG | 0.528564 | 8.1:-6714096 | MS.gene26507:CDS |
| TGAAGATAGTGATGGTCACC+AGG | 0.528788 | 8.1:-6714061 | MS.gene26507:CDS |
| TTTGTTGATAGGAAATCTGA+TGG | 0.531845 | 8.1:-6717072 | MS.gene26507:CDS |
| ATCGTCATTTGATTGTACAT+TGG | 0.532247 | 8.1:+6709094 | None:intergenic |
| GTAGTAGTAGCCAACTTCAA+AGG | 0.533228 | 8.1:-6717503 | MS.gene26507:CDS |
| CTGATAAAACTGAAGCAGAA+AGG | 0.533787 | 8.1:+6710596 | None:intergenic |
| CAACAACCATTAGGTTCTCC+GGG | 0.534602 | 8.1:+6714187 | None:intergenic |
| GGTTGATGCCAACAGGAACC+AGG | 0.534661 | 8.1:-6709961 | MS.gene26507:intron |
| AAGAAATAAACCTTCATGAA+AGG | 0.534930 | 8.1:+6707910 | None:intergenic |
| GAGAGTGTGTTGGTGAGTGA+TGG | 0.535318 | 8.1:-6714447 | MS.gene26507:CDS |
| TGATATTCTTGAATGGGCCA+TGG | 0.535501 | 8.1:-6712781 | MS.gene26507:intron |
| CAAGTTACTAAATTGTTCAA+GGG | 0.538937 | 8.1:-6717471 | MS.gene26507:CDS |
| CATCAACTATTAGGTTCTCA+GGG | 0.539193 | 8.1:+6714334 | None:intergenic |
| CATCTGCCATTAGGTTCTCC+GGG | 0.539618 | 8.1:+6713896 | None:intergenic |
| TCGTAGAACCCGATTGAGCA+TGG | 0.539893 | 8.1:+6706509 | None:intergenic |
| TAGGAGAAAGTTACTTGGGA+AGG | 0.540092 | 8.1:-6709467 | MS.gene26507:CDS |
| CCGGAGAACCAAATAGTTGA+CGG | 0.542247 | 8.1:-6713748 | MS.gene26507:CDS |
| CACTATCTTCAGAAACTGTA+GGG | 0.542555 | 8.1:+6714073 | None:intergenic |
| CTATCAGTTTCATGCTCAGT+AGG | 0.542900 | 8.1:+6713826 | None:intergenic |
| TTACCGAGCATGAAATTGAT+AGG | 0.542943 | 8.1:-6713531 | MS.gene26507:CDS |
| GTATGAATGCACAGAAGTGC+AGG | 0.544270 | 8.1:-6709433 | MS.gene26507:intron |
| TCATTCAACTCACTCATGGA+AGG | 0.545224 | 8.1:+6716071 | None:intergenic |
| ATTCAACTCACTCATGGAAG+GGG | 0.545368 | 8.1:+6716073 | None:intergenic |
| TGAAGATAGTGATGGTCACC+CGG | 0.546321 | 8.1:-6713767 | MS.gene26507:CDS |
| TGAAGATAGTGATGGTCACC+CGG | 0.546321 | 8.1:-6714205 | MS.gene26507:CDS |
| TGGTCACCCGGAGAACCTAA+TGG | 0.548219 | 8.1:-6714193 | MS.gene26507:CDS |
| CATCAACCATTAGGTTCACC+TGG | 0.548263 | 8.1:+6714043 | None:intergenic |
| AGAACCCAATATTGAACCTC+AGG | 0.548327 | 8.1:-6717001 | MS.gene26507:intron |
| TCTTCAGAAACTGTAGGGCC+AGG | 0.548762 | 8.1:+6714078 | None:intergenic |
| GATAGGAAATCTGATGGATC+TGG | 0.549328 | 8.1:-6717066 | MS.gene26507:CDS |
| CATCGATAAGGCTGGATTAG+CGG | 0.549735 | 8.1:+6710568 | None:intergenic |
| TGCAATGGTTGATGGAGAGT+TGG | 0.550418 | 8.1:-6713593 | MS.gene26507:CDS |
| GTAGCATCTTCACTCAAGAA+AGG | 0.552814 | 8.1:-6714557 | MS.gene26507:intron |
| CTTGTAGGAGAAAGTTACTT+GGG | 0.552826 | 8.1:-6709471 | MS.gene26507:CDS |
| CGGAGAACCAAATAGTTGAC+GGG | 0.553446 | 8.1:-6713747 | MS.gene26507:CDS |
| AAGGGATGCAGGTGCTCCAA+AGG | 0.554651 | 8.1:+6712587 | None:intergenic |
| ATATAATTTGTAGTGGTCCA+TGG | 0.555439 | 8.1:+6712663 | None:intergenic |
| GGCACAGAACACTCTTGCGA+TGG | 0.558151 | 8.1:-6712332 | MS.gene26507:CDS |
| CAGGAGAGGCAAAATAGCAT+GGG | 0.558806 | 8.1:+6713408 | None:intergenic |
| CCAATAAAGAATTAGAAGAT+CGG | 0.559196 | 8.1:-6713438 | MS.gene26507:CDS |
| GCAGGAGAGGCAAAATAGCA+TGG | 0.562597 | 8.1:+6713407 | None:intergenic |
| TACTGAGCATGAAACTGATA+GGG | 0.562704 | 8.1:-6713824 | MS.gene26507:CDS |
| TGTTCACCCGGAGAACCTAA+TGG | 0.563331 | 8.1:-6713902 | MS.gene26507:CDS |
| GAACACTCTTGCGATGGAAG+AGG | 0.565276 | 8.1:-6712326 | MS.gene26507:CDS |
| AAATGTAAGTGATGAACCCC+TGG | 0.565984 | 8.1:+6712613 | None:intergenic |
| AGTACGACACAGGACTGTCC+CGG | 0.573443 | 8.1:+6712547 | None:intergenic |
| AACACAAACCTGGTTCCTGT+TGG | 0.574238 | 8.1:+6709953 | None:intergenic |
| AAAGTTTACCAATGTTATTG+TGG | 0.574396 | 8.1:-6709982 | MS.gene26507:CDS |
| ATACTCACTATATAAGGGAC+AGG | 0.574732 | 8.1:+6710384 | None:intergenic |
| GCATACGTTTCATGCTCAGT+AGG | 0.575249 | 8.1:+6713973 | None:intergenic |
| CCGGAGAACCTAATGGCAGA+TGG | 0.578295 | 8.1:-6713895 | MS.gene26507:CDS |
| GGCATCAACCACAATAACAT+TGG | 0.578806 | 8.1:+6709974 | None:intergenic |
| TGGTCACCAGGTGAACCTAA+TGG | 0.579355 | 8.1:-6714049 | MS.gene26507:CDS |
| GGATGGTCTATGATATTCCA+AGG | 0.580650 | 8.1:+6712568 | None:intergenic |
| CGCTAATCCAGCCTTATCGA+TGG | 0.586062 | 8.1:-6710567 | MS.gene26507:CDS |
| CGGATTGGTTGTCCTTCCAG+GGG | 0.587875 | 8.1:-6712629 | MS.gene26507:CDS |
| GGTAAATTGAGAAGTTCACT+TGG | 0.592657 | 8.1:-6717045 | MS.gene26507:CDS |
| ACGACTGCCTCTTAAATGCA+AGG | 0.592811 | 8.1:-6716753 | MS.gene26507:CDS |
| TATGATGAAGAAAACTCGGA+GGG | 0.596061 | 8.1:-6714477 | MS.gene26507:CDS |
| ATGCTTTCGAACAGCCGTGA+GGG | 0.596972 | 8.1:+6717147 | None:intergenic |
| AACACATACCAAATTAGAGC+AGG | 0.601107 | 8.1:+6711341 | None:intergenic |
| ACAGGGTTATAGGTCGTGGA+AGG | 0.601452 | 8.1:-6717172 | MS.gene26507:intron |
| GGTCGTGGAAGGAGCCCTCA+CGG | 0.602693 | 8.1:-6717161 | MS.gene26507:CDS |
| TGGAATATCATAGACCATCC+GGG | 0.603720 | 8.1:-6712565 | MS.gene26507:CDS |
| TGAAGATAGTGATGTTCACC+CGG | 0.604466 | 8.1:-6713914 | MS.gene26507:CDS |
| TACTCGCATATAATTTGTAG+TGG | 0.605532 | 8.1:+6712656 | None:intergenic |
| AAAGTTACTTGGGAAGGAGA+AGG | 0.608555 | 8.1:-6709461 | MS.gene26507:CDS |
| ACTTCTGTGCATTCATACAC+TGG | 0.608746 | 8.1:+6709438 | None:intergenic |
| CTACTGAGTATGAAACTGAC+AGG | 0.610487 | 8.1:-6714263 | MS.gene26507:CDS |
| TCTTCAGAAATTGTACGGCA+AGG | 0.611661 | 8.1:+6713784 | None:intergenic |
| ATAATTTCTGAAGATAGTGA+TGG | 0.616179 | 8.1:-6714213 | MS.gene26507:CDS |
| ACAATTTCTGAAGATAGTGA+TGG | 0.618662 | 8.1:-6713775 | MS.gene26507:CDS |
| ACCTAACCTCCAAGCCTCCA+GGG | 0.619617 | 8.1:+6716711 | None:intergenic |
| GGGAAATTCAGAGAGTGTGT+TGG | 0.623647 | 8.1:-6714457 | MS.gene26507:CDS |
| TAGATATGATGAAGAAAACT+CGG | 0.624639 | 8.1:-6714481 | MS.gene26507:CDS |
| TCTGAAAACATTGTTGGTGA+TGG | 0.625769 | 8.1:-6714360 | MS.gene26507:CDS |
| CATTGGTAATTGTGTGAGAA+CGG | 0.626236 | 8.1:+6709111 | None:intergenic |
| TACATCAGCTAACTCCAGAC+CGG | 0.627142 | 8.1:+6712493 | None:intergenic |
| TTTCATACTGGGAATAACGC+AGG | 0.628198 | 8.1:+6713389 | None:intergenic |
| ATCAACTATTAGGTTCTCAG+GGG | 0.629913 | 8.1:+6714335 | None:intergenic |
| TCAAAAGATGATAACAACAA+TGG | 0.629958 | 8.1:-6717531 | MS.gene26507:CDS |
| CTGTCAGTTTCATACTCAGT+AGG | 0.631983 | 8.1:+6714264 | None:intergenic |
| GTGATGTTCAGGAACTGCAT+AGG | 0.634986 | 8.1:-6717098 | MS.gene26507:CDS |
| ATCAGAGACAGCAATCCAGA+GGG | 0.636699 | 8.1:+6715493 | None:intergenic |
| CGTCTTAAAGAAGAGTGAGA+TGG | 0.636727 | 8.1:+6715457 | None:intergenic |
| ACAGTTTCTGAAGATAGTGA+TGG | 0.638042 | 8.1:-6714069 | MS.gene26507:CDS |
| TACTGGGAATAACGCAGGAG+AGG | 0.649934 | 8.1:+6713394 | None:intergenic |
| CTGTTGAACCAGTACGACAC+AGG | 0.653684 | 8.1:+6712537 | None:intergenic |
| GTATGAAACTGACAGGTCAA+CGG | 0.656919 | 8.1:-6714256 | MS.gene26507:CDS |
| GTAAGTGATGAACCCCTGGA+AGG | 0.657537 | 8.1:+6712617 | None:intergenic |
| ATGAAAGGCCGATCGCGATG+CGG | 0.666016 | 8.1:+6707925 | None:intergenic |
| ATATGATGAAGAAAACTCGG+AGG | 0.668194 | 8.1:-6714478 | MS.gene26507:CDS |
| AATCAGAGACAGCAATCCAG+AGG | 0.670398 | 8.1:+6715492 | None:intergenic |
| CGACACAGGACTGTCCCGGA+TGG | 0.670958 | 8.1:+6712551 | None:intergenic |
| TGGTCATCTGGAGAATGCAA+TGG | 0.674983 | 8.1:-6713608 | MS.gene26507:CDS |
| AGAATTTCTGAAGATAGTGG+TGG | 0.678763 | 8.1:-6713628 | MS.gene26507:CDS |
| CATGCTTTCGAACAGCCGTG+AGG | 0.679456 | 8.1:+6717146 | None:intergenic |
| GATGGTCTATGATATTCCAA+GGG | 0.684841 | 8.1:+6712569 | None:intergenic |
| AATTTGCAGGAAAATGACCA+TGG | 0.689684 | 8.1:-6712680 | MS.gene26507:intron |
| TACAGATTGGAGCTGCAAAG+GGG | 0.690826 | 8.1:-6709181 | MS.gene26507:intron |
| AGGAGAGGCAAAATAGCATG+GGG | 0.701722 | 8.1:+6713409 | None:intergenic |
| TCAACTATTAGGTTCTCAGG+GGG | 0.705304 | 8.1:+6714336 | None:intergenic |
| TAATAGTTGATGGAGAGCTG+CGG | 0.708549 | 8.1:-6714323 | MS.gene26507:CDS |
| AGTGATGGAATAATAGAACA+CGG | 0.710993 | 8.1:-6714432 | MS.gene26507:CDS |
| ACGGCTGTTCGAAAGCATGG+TGG | 0.718537 | 8.1:-6717142 | MS.gene26507:CDS |
| ATTGACGCTTGAGAGCAGTG+AGG | 0.768293 | 8.1:+6717403 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 6706456 | 6717616 | 6706456 | ID=MS.gene26507 |
| chr8.1 | mRNA | 6706456 | 6717616 | 6706456 | ID=MS.gene26507.t1;Parent=MS.gene26507 |
| chr8.1 | exon | 6717374 | 6717616 | 6717374 | ID=MS.gene26507.t1.exon1;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6717374 | 6717616 | 6717374 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6717002 | 6717190 | 6717002 | ID=MS.gene26507.t1.exon2;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6717002 | 6717190 | 6717002 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6716718 | 6716801 | 6716718 | ID=MS.gene26507.t1.exon3;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6716718 | 6716801 | 6716718 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6716055 | 6716114 | 6716055 | ID=MS.gene26507.t1.exon4;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6716055 | 6716114 | 6716055 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6715697 | 6715741 | 6715697 | ID=MS.gene26507.t1.exon5;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6715697 | 6715741 | 6715697 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6715376 | 6715575 | 6715376 | ID=MS.gene26507.t1.exon6;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6715376 | 6715575 | 6715376 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6713370 | 6714575 | 6713370 | ID=MS.gene26507.t1.exon7;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6713370 | 6714575 | 6713370 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6712782 | 6712908 | 6712782 | ID=MS.gene26507.t1.exon8;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6712782 | 6712908 | 6712782 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6712496 | 6712693 | 6712496 | ID=MS.gene26507.t1.exon9;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6712496 | 6712693 | 6712496 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6712267 | 6712353 | 6712267 | ID=MS.gene26507.t1.exon10;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6712267 | 6712353 | 6712267 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6711350 | 6711412 | 6711350 | ID=MS.gene26507.t1.exon11;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6711350 | 6711412 | 6711350 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6710549 | 6710623 | 6710549 | ID=MS.gene26507.t1.exon12;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6710549 | 6710623 | 6710549 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6710392 | 6710442 | 6710392 | ID=MS.gene26507.t1.exon13;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6710392 | 6710442 | 6710392 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6709962 | 6710039 | 6709962 | ID=MS.gene26507.t1.exon14;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6709962 | 6710039 | 6709962 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6709434 | 6709568 | 6709434 | ID=MS.gene26507.t1.exon15;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6709434 | 6709568 | 6709434 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6709091 | 6709198 | 6709091 | ID=MS.gene26507.t1.exon16;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6709091 | 6709198 | 6709091 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6707921 | 6707986 | 6707921 | ID=MS.gene26507.t1.exon17;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6707921 | 6707986 | 6707921 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| chr8.1 | exon | 6706456 | 6706533 | 6706456 | ID=MS.gene26507.t1.exon18;Parent=MS.gene26507.t1 |
| chr8.1 | CDS | 6706456 | 6706533 | 6706456 | ID=cds.MS.gene26507.t1;Parent=MS.gene26507.t1 |
| Gene Sequence |
| Protein sequence |
