Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26638.t1 | AAL99370.1 | 91.2 | 509 | 27 | 4 | 1 | 494 | 1 | 506 | 6.20E-257 | 896.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26638.t1 | Q9LJK1 | 64.3 | 493 | 155 | 5 | 15 | 494 | 17 | 501 | 1.4e-177 | 624.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26638.t1 | Q5DTC8 | 90.8 | 512 | 22 | 5 | 1 | 494 | 1 | 505 | 4.4e-257 | 896.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053083 | MS.gene26638 | 0.808601 | 2.86E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26638.t1 | MTR_4g086010 | 91.107 | 506 | 31 | 3 | 1 | 494 | 1 | 504 | 0.0 | 917 |
| MS.gene26638.t1 | MTR_1g096880 | 30.000 | 150 | 100 | 3 | 221 | 366 | 257 | 405 | 4.48e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26638.t1 | AT3G19280 | 63.116 | 507 | 168 | 5 | 1 | 494 | 1 | 501 | 0.0 | 642 |
| MS.gene26638.t1 | AT1G49710 | 64.182 | 483 | 151 | 3 | 28 | 494 | 37 | 513 | 0.0 | 639 |
| MS.gene26638.t1 | AT1G71990 | 33.333 | 108 | 71 | 1 | 253 | 360 | 282 | 388 | 1.09e-12 | 70.1 |
Find 110 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGAATTTGAGGTCTTTC+AGG | 0.176747 | 4.1:+23665954 | None:intergenic |
| GGAGCAAAATCTTGAATATT+TGG | 0.188827 | 4.1:+23667301 | None:intergenic |
| TGTTCAGTGGGATGTAAATT+TGG | 0.189104 | 4.1:-23670089 | MS.gene26638:CDS |
| GGATGTAAATTTGGGTTTAA+TGG | 0.196217 | 4.1:-23670080 | MS.gene26638:CDS |
| GATGTAAATTTGGGTTTAAT+GGG | 0.244101 | 4.1:-23670079 | MS.gene26638:CDS |
| CAAGGTCGCTTCTTGAAGTC+TGG | 0.249475 | 4.1:+23666798 | None:intergenic |
| TTTCAAAGCCCTTGTGGATA+TGG | 0.260182 | 4.1:-23666892 | MS.gene26638:CDS |
| CTGAAACTGGTAAACCTTCT+TGG | 0.261326 | 4.1:+23670987 | None:intergenic |
| CAAATGCAGCCTCAGGTTTC+CGG | 0.264039 | 4.1:+23670054 | None:intergenic |
| ATTCACAAGCTAGATGATTA+TGG | 0.286226 | 4.1:-23670440 | MS.gene26638:intron |
| ATAAGTATACCTCAAGTAAA+TGG | 0.291681 | 4.1:+23666704 | None:intergenic |
| GTGGTTGAAGGTGATGATTT+TGG | 0.305457 | 4.1:-23670812 | MS.gene26638:CDS |
| TTCCTTCTCTCTACTCTTTG+TGG | 0.307095 | 4.1:+23666830 | None:intergenic |
| AGCTAAATTTGTAGCGCGTC+AGG | 0.312319 | 4.1:+23668193 | None:intergenic |
| GAAAGACCTCAAATTCTAAA+AGG | 0.322355 | 4.1:-23665951 | MS.gene26638:CDS |
| TCCATACAGGAACATGATTC+AGG | 0.327965 | 4.1:+23665979 | None:intergenic |
| AATGAATGATTATATGCTTC+AGG | 0.344669 | 4.1:+23667196 | None:intergenic |
| CGGAAACCTGAGGCTGCATT+TGG | 0.349184 | 4.1:-23670053 | MS.gene26638:CDS |
| GTTCAGTGGGATGTAAATTT+GGG | 0.358728 | 4.1:-23670088 | MS.gene26638:CDS |
| ACCACAAGTGCTACAAATAA+AGG | 0.376044 | 4.1:+23670920 | None:intergenic |
| TGAAACTGGTAAACCTTCTT+GGG | 0.382153 | 4.1:+23670988 | None:intergenic |
| AAATTCGACCATTTCTTCTT+CGG | 0.400382 | 4.1:+23670947 | None:intergenic |
| AACATCTCGATCGACTCTTA+TGG | 0.406384 | 4.1:-23669219 | MS.gene26638:CDS |
| GAAATTTCGAGCACCACAAT+TGG | 0.407353 | 4.1:+23669275 | None:intergenic |
| AATCAACATCCCCGTTGAAC+TGG | 0.408380 | 4.1:+23665859 | None:intergenic |
| GGTCTTTCAGGCTTCCATAC+AGG | 0.423025 | 4.1:+23665966 | None:intergenic |
| TGTAAGAACAGCAGTCTTGA+AGG | 0.423681 | 4.1:+23666013 | None:intergenic |
| TTTATACCTTCCAGTTCAAC+GGG | 0.427236 | 4.1:-23665869 | MS.gene26638:CDS |
| ACTCTTATGGTAGTTGTCAT+AGG | 0.429860 | 4.1:-23669206 | MS.gene26638:CDS |
| ATGAATGATTATATGCTTCA+GGG | 0.430093 | 4.1:+23667197 | None:intergenic |
| TGCCTCTGTGTCAAGCCCGC+AGG | 0.433454 | 4.1:+23665897 | None:intergenic |
| CAACGGTTCCGAAGAAGAAA+TGG | 0.436167 | 4.1:-23670955 | MS.gene26638:CDS |
| CGGTCACGTGCGGTGGTTGA+AGG | 0.440213 | 4.1:-23670824 | MS.gene26638:CDS |
| CCCTGAATCATGTTCCTGTA+TGG | 0.440726 | 4.1:-23665980 | MS.gene26638:CDS |
| ATCATATCTATGTGAGAGAA+AGG | 0.446491 | 4.1:-23666746 | MS.gene26638:CDS |
| GGAACTATCCCTGTGGTTGT+TGG | 0.468275 | 4.1:-23667328 | MS.gene26638:CDS |
| GCCTTTATTTGTAGCACTTG+TGG | 0.470674 | 4.1:-23670921 | MS.gene26638:CDS |
| TTGCCGCCTTTGCATTCACT+TGG | 0.471450 | 4.1:-23666853 | MS.gene26638:CDS |
| AAAAGGTGGCGATAAATTGA+AGG | 0.471707 | 4.1:-23665934 | MS.gene26638:CDS |
| TCATATCTATGTGAGAGAAA+GGG | 0.471718 | 4.1:-23666745 | MS.gene26638:CDS |
| GTTGTTGAAGAAACTGAAAC+TGG | 0.471818 | 4.1:+23670974 | None:intergenic |
| TGCTAGGTATCTCATGGACT+TGG | 0.478874 | 4.1:+23667225 | None:intergenic |
| CTTAATAGGTGGAAGTATGA+AGG | 0.479545 | 4.1:-23666927 | MS.gene26638:intron |
| AATTTGGGTTTAATGGGGAC+CGG | 0.493352 | 4.1:-23670073 | MS.gene26638:CDS |
| AAGGTCGCTTCTTGAAGTCT+GGG | 0.499184 | 4.1:+23666799 | None:intergenic |
| TGTTGATTTCAGAAGTCACT+TGG | 0.501731 | 4.1:-23665844 | MS.gene26638:CDS |
| CTTTATACCTTCCAGTTCAA+CGG | 0.510464 | 4.1:-23665870 | MS.gene26638:CDS |
| GGGTTAGAGACAGTTGGTGG+TGG | 0.519319 | 4.1:-23670791 | MS.gene26638:intron |
| TTTGGCTTACCTCAGCAAGC+TGG | 0.521291 | 4.1:-23670035 | MS.gene26638:CDS |
| GCCTCTGTGTCAAGCCCGCA+GGG | 0.522965 | 4.1:+23665898 | None:intergenic |
| TTTATATATCAAAGAACTAG+AGG | 0.526597 | 4.1:-23667263 | MS.gene26638:CDS |
| GGGCTTCGAGAGCTTGCAAT+CGG | 0.529518 | 4.1:+23669253 | None:intergenic |
| CAGATCTAGCAATTTAACTC+TGG | 0.532467 | 4.1:-23666039 | MS.gene26638:CDS |
| CGACCTTGCAAGTGCACTCG+AGG | 0.534412 | 4.1:-23666783 | MS.gene26638:CDS |
| CTATCATCTGACGTCCCTGT+TGG | 0.535464 | 4.1:-23669378 | MS.gene26638:CDS |
| AGAAAGGGGAACATTTGAGA+TGG | 0.538112 | 4.1:-23666730 | MS.gene26638:CDS |
| GACCCTCGAGTGCACTTGCA+AGG | 0.544331 | 4.1:+23666780 | None:intergenic |
| AGATGGAGTCCATTTACTTG+AGG | 0.544735 | 4.1:-23666713 | MS.gene26638:intron |
| GCAAAATCTTGAATATTTGG+AGG | 0.547789 | 4.1:+23667304 | None:intergenic |
| TTTGGGTTAGAGACAGTTGG+TGG | 0.548513 | 4.1:-23670794 | MS.gene26638:CDS |
| GCTAAATTTGTAGCGCGTCA+GGG | 0.548640 | 4.1:+23668194 | None:intergenic |
| CATAGGAATCGTGATGGAAG+AGG | 0.549344 | 4.1:-23669189 | MS.gene26638:intron |
| GGTAAGCCAAATGCAGCCTC+AGG | 0.550885 | 4.1:+23670047 | None:intergenic |
| AGTTTCAGTTTCTTCAACAA+CGG | 0.551370 | 4.1:-23670972 | MS.gene26638:CDS |
| CCATACAGGAACATGATTCA+GGG | 0.555223 | 4.1:+23665980 | None:intergenic |
| AGCAAGTGTTCTGAGATCAA+TGG | 0.556001 | 4.1:-23670009 | MS.gene26638:CDS |
| CTTCAACCACCGCACGTGAC+CGG | 0.560057 | 4.1:+23670825 | None:intergenic |
| GCTTACCCACCGTCGTGCCA+TGG | 0.563480 | 4.1:+23669953 | None:intergenic |
| TGATTCTTTCAAAGCCCTTG+TGG | 0.563594 | 4.1:-23666898 | MS.gene26638:CDS |
| TTAATAGGTGGAAGTATGAA+GGG | 0.568822 | 4.1:-23666926 | MS.gene26638:intron |
| ATGTAAATTTGGGTTTAATG+GGG | 0.569442 | 4.1:-23670078 | MS.gene26638:CDS |
| CATATCTATGTGAGAGAAAG+GGG | 0.571252 | 4.1:-23666744 | MS.gene26638:CDS |
| TGGTTGCTGACTTGTTCTAC+CGG | 0.572262 | 4.1:-23670844 | MS.gene26638:CDS |
| TTTGGAGGACCAACAACCAC+AGG | 0.573436 | 4.1:+23667319 | None:intergenic |
| TGTAGCACTTGTGGTTATTG+CGG | 0.574927 | 4.1:-23670912 | MS.gene26638:CDS |
| ATGGGCTGAGTATGACATCA+TGG | 0.579350 | 4.1:-23669346 | MS.gene26638:CDS |
| AAGCATATTCAAACTCAACC+AGG | 0.579633 | 4.1:-23670411 | MS.gene26638:CDS |
| GAATGGAAGTCATGTTCAGT+GGG | 0.580562 | 4.1:-23670101 | MS.gene26638:CDS |
| ACAACAACAACAACCCAAGA+AGG | 0.582368 | 4.1:-23671001 | MS.gene26638:CDS |
| TATGGCTAAGAACGCAGCTA+TGG | 0.583698 | 4.1:-23670864 | MS.gene26638:CDS |
| AGATTAAGAACAGCTTAACC+TGG | 0.594085 | 4.1:+23670393 | None:intergenic |
| GTTTACAAAATATACCCTGC+GGG | 0.597021 | 4.1:-23665912 | MS.gene26638:CDS |
| GTTCTACCGGTCACGTGCGG+TGG | 0.597759 | 4.1:-23670831 | MS.gene26638:CDS |
| AGGGACGTCAGATGATAGAC+TGG | 0.597764 | 4.1:+23669383 | None:intergenic |
| ATTACTTCAAACTTGGCACA+AGG | 0.599899 | 4.1:+23665813 | None:intergenic |
| CTTGCTGTTCCAGCTTGCTG+AGG | 0.609503 | 4.1:+23670026 | None:intergenic |
| AACATCCCCGTTGAACTGGA+AGG | 0.611381 | 4.1:+23665863 | None:intergenic |
| ATTTGAAAATTCTAACGAGG+AGG | 0.613665 | 4.1:-23668166 | MS.gene26638:CDS |
| GGCCACAAAGAGTAGAGAGA+AGG | 0.614704 | 4.1:-23666832 | MS.gene26638:CDS |
| TGTTCTGAGATCAATGGAGT+CGG | 0.617911 | 4.1:-23670003 | MS.gene26638:CDS |
| GGAATGGAAGTCATGTTCAG+TGG | 0.622651 | 4.1:-23670102 | MS.gene26638:CDS |
| AGTTGTCATAGGAATCGTGA+TGG | 0.623002 | 4.1:-23669195 | MS.gene26638:CDS |
| AGACCTCAAATTCTAAAAGG+TGG | 0.623532 | 4.1:-23665948 | MS.gene26638:CDS |
| TGCAGAGAACAATCTTGCCA+TGG | 0.638573 | 4.1:-23669970 | MS.gene26638:CDS |
| GTACAGCTGCCATATCCACA+AGG | 0.639994 | 4.1:+23666883 | None:intergenic |
| AAGCATATAATCATTCATTG+AGG | 0.644737 | 4.1:-23667192 | MS.gene26638:intron |
| TTGTGGCCAAGTGAATGCAA+AGG | 0.647931 | 4.1:+23666847 | None:intergenic |
| TGGCCAAGTGAATGCAAAGG+CGG | 0.648142 | 4.1:+23666850 | None:intergenic |
| GACCTTGCAAGTGCACTCGA+GGG | 0.651570 | 4.1:-23666782 | MS.gene26638:CDS |
| AGGGCTTTGAAAGAATCAGA+TGG | 0.653261 | 4.1:+23666903 | None:intergenic |
| TAATGGGGACCGGAAACCTG+AGG | 0.665866 | 4.1:-23670063 | MS.gene26638:CDS |
| CTTGTTCTACCGGTCACGTG+CGG | 0.672406 | 4.1:-23670834 | MS.gene26638:CDS |
| AGCATTTGAAAATTCTAACG+AGG | 0.673819 | 4.1:-23668169 | MS.gene26638:CDS |
| ACCCTGCGGGCTTGACACAG+AGG | 0.679828 | 4.1:-23665899 | MS.gene26638:CDS |
| TTGGAGGACCAACAACCACA+GGG | 0.701308 | 4.1:+23667320 | None:intergenic |
| TACAGCTGCCATATCCACAA+GGG | 0.711712 | 4.1:+23666884 | None:intergenic |
| ACAATCTTGCCATGGCACGA+CGG | 0.711769 | 4.1:-23669962 | MS.gene26638:intron |
| TGTTGTAGGAACTATCCCTG+TGG | 0.713149 | 4.1:-23667335 | MS.gene26638:intron |
| GGTTTACAAAATATACCCTG+CGG | 0.717875 | 4.1:-23665913 | MS.gene26638:CDS |
| TTATACCTTCCAGTTCAACG+GGG | 0.752006 | 4.1:-23665868 | MS.gene26638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAAATTAAAAGTTATTT+TGG | - | chr4.1:23668837-23668856 | MS.gene26638:intron | 10.0% |
| !!! | AAATCAAAATATCAATATTT+TGG | + | chr4.1:23666582-23666601 | None:intergenic | 10.0% |
| !!! | AATAACTTTTAATTTGTTTT+TGG | + | chr4.1:23668836-23668855 | None:intergenic | 10.0% |
| !!! | TTTCTAAAAAAAATTGAAAT+AGG | + | chr4.1:23667353-23667372 | None:intergenic | 10.0% |
| !! | TTGATATATAAAAATGAATC+AGG | + | chr4.1:23669557-23669576 | None:intergenic | 15.0% |
| !!! | AACTTTATTTAAAAGAATGA+AGG | - | chr4.1:23668224-23668243 | MS.gene26638:intron | 15.0% |
| !!! | TATGATACTATTTATTTCTT+AGG | + | chr4.1:23670303-23670322 | None:intergenic | 15.0% |
| !!! | TATTTGATCGTAATTTATTT+TGG | + | chr4.1:23670214-23670233 | None:intergenic | 15.0% |
| !! | AAACAAAAATTATGGTACAT+TGG | - | chr4.1:23669180-23669199 | MS.gene26638:intron | 20.0% |
| !! | AACAAAAATTATGGTACATT+GGG | - | chr4.1:23669181-23669200 | MS.gene26638:intron | 20.0% |
| !! | AATATTGCAGTATATAATCT+GGG | - | chr4.1:23669788-23669807 | MS.gene26638:intron | 20.0% |
| !! | AATTGTCATACATAAACAAT+GGG | + | chr4.1:23668518-23668537 | None:intergenic | 20.0% |
| !! | ACTTATTTGAATTTATCTAC+TGG | + | chr4.1:23670655-23670674 | None:intergenic | 20.0% |
| !! | ATATTCAAGGAACTTTAATA+AGG | - | chr4.1:23666123-23666142 | MS.gene26638:intron | 20.0% |
| !! | ATTATATACTGCAATATTCT+AGG | + | chr4.1:23669786-23669805 | None:intergenic | 20.0% |
| !! | GTGAATAAATTTCATCAAAA+AGG | + | chr4.1:23666374-23666393 | None:intergenic | 20.0% |
| !! | TAATTGTCATACATAAACAA+TGG | + | chr4.1:23668519-23668538 | None:intergenic | 20.0% |
| !! | TTGAATGAACTAATAACTTT+AGG | + | chr4.1:23666701-23666720 | None:intergenic | 20.0% |
| !! | TTGATGAAAACTAAAAACAA+AGG | + | chr4.1:23667292-23667311 | None:intergenic | 20.0% |
| !! | TTTATATATCAAAGAACTAG+AGG | - | chr4.1:23669565-23669584 | MS.gene26638:intron | 20.0% |
| !!! | AATGTACCATAATTTTTGTT+TGG | + | chr4.1:23669181-23669200 | None:intergenic | 20.0% |
| !!! | AGAAGTTATTTTCAAAAACT+AGG | + | chr4.1:23667824-23667843 | None:intergenic | 20.0% |
| !!! | ATAATGCTTTTTGAAAGAAT+TGG | - | chr4.1:23668294-23668313 | MS.gene26638:intron | 20.0% |
| !!! | ATTTGGTTTTAAAATGTGAA+TGG | - | chr4.1:23669823-23669842 | MS.gene26638:intron | 20.0% |
| !!! | TATCTGAAAAATGTTGTTTT+TGG | - | chr4.1:23666553-23666572 | MS.gene26638:intron | 20.0% |
| !!! | TCAGATGAAGAATTTTAAAA+GGG | - | chr4.1:23668029-23668048 | MS.gene26638:intron | 20.0% |
| !!! | TTTGAAGTAATTTTTGTGTA+GGG | - | chr4.1:23671027-23671046 | MS.gene26638:CDS | 20.0% |
| !!! | TTTTTGTATTTTGTGATTTG+TGG | - | chr4.1:23669859-23669878 | MS.gene26638:intron | 20.0% |
| ! | AAAACATCATAATCAGACAT+TGG | + | chr4.1:23667697-23667716 | None:intergenic | 25.0% |
| ! | AAGCATATAATCATTCATTG+AGG | - | chr4.1:23669636-23669655 | MS.gene26638:intron | 25.0% |
| ! | AAGTGAATTTCCATGTATAA+TGG | - | chr4.1:23669366-23669385 | MS.gene26638:CDS | 25.0% |
| ! | AATAACCAGAAAAGAACTTA+TGG | - | chr4.1:23670574-23670593 | MS.gene26638:intron | 25.0% |
| ! | AATGAATGATTATATGCTTC+AGG | + | chr4.1:23669635-23669654 | None:intergenic | 25.0% |
| ! | ACAAAAATTCATTGGAAGTT+TGG | + | chr4.1:23668546-23668565 | None:intergenic | 25.0% |
| ! | ACTTCATAAGAACAATAATC+AGG | + | chr4.1:23666667-23666686 | None:intergenic | 25.0% |
| ! | ATAAGTATACCTCAAGTAAA+TGG | + | chr4.1:23670127-23670146 | None:intergenic | 25.0% |
| ! | ATGAATGATTATATGCTTCA+GGG | + | chr4.1:23669634-23669653 | None:intergenic | 25.0% |
| ! | ATGGAATAAGCTAAAATGAT+AGG | + | chr4.1:23670710-23670729 | None:intergenic | 25.0% |
| ! | ATGTGTTGAATTTGAATAAC+TGG | + | chr4.1:23668767-23668786 | None:intergenic | 25.0% |
| ! | ATTTAAAAGAATGAAGGAGT+TGG | - | chr4.1:23668230-23668249 | MS.gene26638:intron | 25.0% |
| ! | CACAAAAATTACTTCAAACT+TGG | + | chr4.1:23671025-23671044 | None:intergenic | 25.0% |
| ! | CATCAAGATTTATAAATGAG+AGG | - | chr4.1:23667952-23667971 | MS.gene26638:intron | 25.0% |
| ! | CATGACATTCTTAATAAAGA+TGG | + | chr4.1:23670729-23670748 | None:intergenic | 25.0% |
| ! | CATGTGAATTATTTGTATCA+AGG | - | chr4.1:23666328-23666347 | MS.gene26638:intron | 25.0% |
| ! | CTTCAACTCTAAATAAACTT+TGG | + | chr4.1:23668928-23668947 | None:intergenic | 25.0% |
| ! | CTTGATACAAATAATTCACA+TGG | + | chr4.1:23666330-23666349 | None:intergenic | 25.0% |
| ! | GAAAGGAAGAAACAAAAAAT+GGG | + | chr4.1:23668130-23668149 | None:intergenic | 25.0% |
| ! | GAATATTGCAGTATATAATC+TGG | - | chr4.1:23669787-23669806 | MS.gene26638:intron | 25.0% |
| ! | GATGAACCAAACAAAAATTA+TGG | - | chr4.1:23669172-23669191 | MS.gene26638:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr4.1:23667022-23667041 | None:intergenic | 25.0% |
| ! | TAAAATGATAGGTACCATAA+TGG | + | chr4.1:23670699-23670718 | None:intergenic | 25.0% |
| ! | TAAACTTTAACTCAGTGATT+TGG | - | chr4.1:23668060-23668079 | MS.gene26638:intron | 25.0% |
| ! | TACGAACAACAAAAATTCAT+TGG | + | chr4.1:23668554-23668573 | None:intergenic | 25.0% |
| ! | TAGAGAAAAAATTGTCTTTC+AGG | + | chr4.1:23669277-23669296 | None:intergenic | 25.0% |
| ! | TAGTATCATATGATTGTGTT+TGG | - | chr4.1:23670313-23670332 | MS.gene26638:intron | 25.0% |
| ! | TATAAAAATGAATCAGGAGA+AGG | + | chr4.1:23669551-23669570 | None:intergenic | 25.0% |
| ! | TCGTATTTGTGAATGTATAT+TGG | - | chr4.1:23668569-23668588 | MS.gene26638:intron | 25.0% |
| ! | TGAAAACAAACAAGTTTCTT+CGG | - | chr4.1:23669672-23669691 | MS.gene26638:intron | 25.0% |
| ! | TTATCCTTGAAGATCTATAT+TGG | - | chr4.1:23668347-23668366 | MS.gene26638:intron | 25.0% |
| ! | TTATTAGTTCATTCAAATGC+AGG | - | chr4.1:23666705-23666724 | MS.gene26638:intron | 25.0% |
| ! | TTATTCAAATTCAACACATG+TGG | - | chr4.1:23668768-23668787 | MS.gene26638:intron | 25.0% |
| ! | TTTAGAGAAACCATTAGAAA+AGG | - | chr4.1:23666974-23666993 | MS.gene26638:intron | 25.0% |
| !! | AAATTTTCCACCATTATACA+TGG | + | chr4.1:23669379-23669398 | None:intergenic | 25.0% |
| !! | ATGTAAATTTGGGTTTAATG+GGG | - | chr4.1:23666750-23666769 | MS.gene26638:CDS | 25.0% |
| !! | CAATTTTATTGCAAATGAAG+TGG | - | chr4.1:23669235-23669254 | MS.gene26638:CDS | 25.0% |
| !! | CATAAAATTTTCACAACTGA+TGG | + | chr4.1:23668888-23668907 | None:intergenic | 25.0% |
| !! | GATGTAAATTTGGGTTTAAT+GGG | - | chr4.1:23666749-23666768 | MS.gene26638:CDS | 25.0% |
| !! | GTCAGATGAAGAATTTTAAA+AGG | - | chr4.1:23668028-23668047 | MS.gene26638:intron | 25.0% |
| !! | GTTGATTCATTACATTTGAT+TGG | - | chr4.1:23666911-23666930 | MS.gene26638:CDS | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | - | chr4.1:23667026-23667045 | MS.gene26638:intron | 25.0% |
| !! | TTGAAGTAATTTTTGTGTAG+GGG | - | chr4.1:23671028-23671047 | MS.gene26638:CDS | 25.0% |
| !! | TTTAAAATTCTTCATCTGAC+AGG | + | chr4.1:23668028-23668047 | None:intergenic | 25.0% |
| !!! | AATATTCTAGGATCCAATTA+TGG | + | chr4.1:23669774-23669793 | None:intergenic | 25.0% |
| !!! | AATGGTGGAAAATTTTATAG+CGG | - | chr4.1:23669384-23669403 | MS.gene26638:CDS | 25.0% |
| !!! | ACACATTATTTTGACACAAA+TGG | - | chr4.1:23670765-23670784 | MS.gene26638:intron | 25.0% |
| !!! | ATCAGAAAGCATTTTATACA+TGG | + | chr4.1:23667851-23667870 | None:intergenic | 25.0% |
| !!! | CACATTATTTTGACACAAAT+GGG | - | chr4.1:23670766-23670785 | MS.gene26638:intron | 25.0% |
| !!! | GTTGTTGTTGTATTTTAGTA+TGG | - | chr4.1:23667102-23667121 | MS.gene26638:intron | 25.0% |
| !!! | GTTTGAAGTAATTTTTGTGT+AGG | - | chr4.1:23671026-23671045 | MS.gene26638:CDS | 25.0% |
| !!! | TGTTTTAATATAAGCTATCC+TGG | - | chr4.1:23670539-23670558 | MS.gene26638:intron | 25.0% |
| !!! | TTAGTCGTTTTTATAATTGC+AGG | - | chr4.1:23669006-23669025 | MS.gene26638:intron | 25.0% |
| !!! | TTCGTTTTTCTTGTTTTCTA+AGG | - | chr4.1:23667318-23667337 | MS.gene26638:CDS | 25.0% |
| !!! | TTTTCAGTTTTTGGCTTTAT+CGG | + | chr4.1:23667510-23667529 | None:intergenic | 25.0% |
| AAATTCGACCATTTCTTCTT+CGG | + | chr4.1:23665884-23665903 | None:intergenic | 30.0% | |
| AACACCAATATAGATCTTCA+AGG | + | chr4.1:23668354-23668373 | None:intergenic | 30.0% | |
| AACATTTGATCCATAGATCT+TGG | - | chr4.1:23667929-23667948 | MS.gene26638:intron | 30.0% | |
| AACCATTAGAAAAGGTTTAG+AGG | - | chr4.1:23666982-23667001 | MS.gene26638:intron | 30.0% | |
| AATATGACGCAATGGTATAT+TGG | + | chr4.1:23669330-23669349 | None:intergenic | 30.0% | |
| AATCTTCAAGGATGATTGTT+TGG | + | chr4.1:23668381-23668400 | None:intergenic | 30.0% | |
| ACATAATGACTTAATACGAG+AGG | + | chr4.1:23669719-23669738 | None:intergenic | 30.0% | |
| AGCATTTGAAAATTCTAACG+AGG | - | chr4.1:23668659-23668678 | MS.gene26638:intron | 30.0% | |
| AGTACTTGTGTTAAACTTGA+TGG | - | chr4.1:23670248-23670267 | MS.gene26638:intron | 30.0% | |
| AGTTGTAGCAAATTTGTGTT+TGG | - | chr4.1:23666257-23666276 | MS.gene26638:intron | 30.0% | |
| AGTTTCAGTTTCTTCAACAA+CGG | - | chr4.1:23665856-23665875 | MS.gene26638:CDS | 30.0% | |
| ATACTAGATCAGATTCAGAT+GGG | + | chr4.1:23669093-23669112 | None:intergenic | 30.0% | |
| ATCAAGTTTAACACAAGTAC+TGG | + | chr4.1:23670249-23670268 | None:intergenic | 30.0% | |
| ATCTTCAAGGATGATTGTTT+GGG | + | chr4.1:23668380-23668399 | None:intergenic | 30.0% | |
| ATTCACAAGCTAGATGATTA+TGG | - | chr4.1:23666388-23666407 | MS.gene26638:intron | 30.0% | |
| ATTTATTTACATTGCACCGA+AGG | - | chr4.1:23669740-23669759 | MS.gene26638:intron | 30.0% | |
| ATTTGAAAATTCTAACGAGG+AGG | - | chr4.1:23668662-23668681 | MS.gene26638:intron | 30.0% | |
| CATAATGACTTAATACGAGA+GGG | + | chr4.1:23669718-23669737 | None:intergenic | 30.0% | |
| GAAACAAAAGTTCAAGAAAG+TGG | + | chr4.1:23668272-23668291 | None:intergenic | 30.0% | |
| GAAAGACCTCAAATTCTAAA+AGG | - | chr4.1:23670877-23670896 | MS.gene26638:CDS | 30.0% | |
| GCAAAATCTTGAATATTTGG+AGG | + | chr4.1:23669527-23669546 | None:intergenic | 30.0% | |
| GGAAAGGAAGAAACAAAAAA+TGG | + | chr4.1:23668131-23668150 | None:intergenic | 30.0% | |
| GGAGCAAAATCTTGAATATT+TGG | + | chr4.1:23669530-23669549 | None:intergenic | 30.0% | |
| GGGAAAATAGAGAAATCAAA+GGG | + | chr4.1:23668110-23668129 | None:intergenic | 30.0% | |
| TAAATGTGCAAAATCCAGTA+TGG | - | chr4.1:23668479-23668498 | MS.gene26638:intron | 30.0% | |
| TATAGTAGAATATGACGCAA+TGG | + | chr4.1:23669338-23669357 | None:intergenic | 30.0% | |
| TCATAAGAACAATAATCAGG+AGG | + | chr4.1:23666664-23666683 | None:intergenic | 30.0% | |
| TCATCCTTGAAGATTTATAC+TGG | - | chr4.1:23668386-23668405 | MS.gene26638:intron | 30.0% | |
| TGAATTTCCATGTATAATGG+TGG | - | chr4.1:23669369-23669388 | MS.gene26638:CDS | 30.0% | |
| TGAGTTATCTTCTTAATAGG+TGG | - | chr4.1:23669890-23669909 | MS.gene26638:intron | 30.0% | |
| TGCTGAGTTATCTTCTTAAT+AGG | - | chr4.1:23669887-23669906 | MS.gene26638:intron | 30.0% | |
| TGGGAAAATAGAGAAATCAA+AGG | + | chr4.1:23668111-23668130 | None:intergenic | 30.0% | |
| TTCAGTGACAAGATTAATCA+TGG | - | chr4.1:23666601-23666620 | MS.gene26638:intron | 30.0% | |
| TTTCTTTGTCATTGTCTACT+AGG | - | chr4.1:23667397-23667416 | MS.gene26638:intron | 30.0% | |
| ! | AAGCTCAATTTTGGATAACT+TGG | - | chr4.1:23668945-23668964 | MS.gene26638:intron | 30.0% |
| ! | AATTATGGTGTTAAGTCCTT+CGG | + | chr4.1:23669759-23669778 | None:intergenic | 30.0% |
| ! | AGAATGCAAAGTATTAATGC+AGG | + | chr4.1:23669134-23669153 | None:intergenic | 30.0% |
| ! | ATTATTCTATTTTGTCGCAG+TGG | - | chr4.1:23668599-23668618 | MS.gene26638:intron | 30.0% |
| ! | GAAACTTTTGTGGTTTAATG+TGG | - | chr4.1:23667160-23667179 | MS.gene26638:intron | 30.0% |
| ! | GACTTTTCATATCGAATTGT+TGG | + | chr4.1:23668440-23668459 | None:intergenic | 30.0% |
| ! | GCATTATCTTGTTTGGAATA+CGG | - | chr4.1:23667750-23667769 | MS.gene26638:intron | 30.0% |
| ! | GGATGTAAATTTGGGTTTAA+TGG | - | chr4.1:23666748-23666767 | MS.gene26638:CDS | 30.0% |
| ! | TTAATAGGTGGAAGTATGAA+GGG | - | chr4.1:23669902-23669921 | MS.gene26638:intron | 30.0% |
| ! | TTAGAGTTGAAGCTCAATTT+TGG | - | chr4.1:23668936-23668955 | MS.gene26638:intron | 30.0% |
| ! | TTTAGAATTTGAGGTCTTTC+AGG | + | chr4.1:23670877-23670896 | None:intergenic | 30.0% |
| ! | TTTTGCTGCATTATCTTGTT+TGG | - | chr4.1:23667743-23667762 | MS.gene26638:intron | 30.0% |
| ! | TTTTGTGGTTTATTTCCTGA+TGG | - | chr4.1:23666459-23666478 | MS.gene26638:intron | 30.0% |
| !! | ATAGGTACCATAATGGATTT+AGG | + | chr4.1:23670692-23670711 | None:intergenic | 30.0% |
| !! | ATGCTTTTTGAAAGAATTGG+TGG | - | chr4.1:23668297-23668316 | MS.gene26638:intron | 30.0% |
| !! | ATGGTGGAAAATTTTATAGC+GGG | - | chr4.1:23669385-23669404 | MS.gene26638:CDS | 30.0% |
| !! | TAGGTACCATAATGGATTTA+GGG | + | chr4.1:23670691-23670710 | None:intergenic | 30.0% |
| !! | TATCTTCTCTCATTTTTGAC+TGG | - | chr4.1:23667212-23667231 | MS.gene26638:CDS | 30.0% |
| !! | TGCTTTTTGAAAGAATTGGT+GGG | - | chr4.1:23668298-23668317 | MS.gene26638:intron | 30.0% |
| !! | TTTTGACTGGATTTAAAACC+AGG | - | chr4.1:23667225-23667244 | MS.gene26638:CDS | 30.0% |
| !!! | AAACACTTTTGAGACTGTTA+GGG | + | chr4.1:23670629-23670648 | None:intergenic | 30.0% |
| !!! | CGAGATGTTTGTTTTTTCTA+GGG | + | chr4.1:23667598-23667617 | None:intergenic | 30.0% |
| !!! | TAAACACTTTTGAGACTGTT+AGG | + | chr4.1:23670630-23670649 | None:intergenic | 30.0% |
| !!! | TCGAGATGTTTGTTTTTTCT+AGG | + | chr4.1:23667599-23667618 | None:intergenic | 30.0% |
| AAAAGGTGGCGATAAATTGA+AGG | - | chr4.1:23670894-23670913 | MS.gene26638:CDS | 35.0% | |
| AAACTTTGGCAATTGCATTG+CGG | + | chr4.1:23668914-23668933 | None:intergenic | 35.0% | |
| AACAGACCCTAAATCCATTA+TGG | - | chr4.1:23670682-23670701 | MS.gene26638:intron | 35.0% | |
| AACGCCAGTATAAATCTTCA+AGG | + | chr4.1:23668393-23668412 | None:intergenic | 35.0% | |
| AAGATAATGCAGCAAAAGTG+GGG | + | chr4.1:23667740-23667759 | None:intergenic | 35.0% | |
| AAGCATATTCAAACTCAACC+AGG | - | chr4.1:23666417-23666436 | MS.gene26638:intron | 35.0% | |
| AATCTTGATGCCAAGATCTA+TGG | + | chr4.1:23667942-23667961 | None:intergenic | 35.0% | |
| ACAAGATAATGCAGCAAAAG+TGG | + | chr4.1:23667742-23667761 | None:intergenic | 35.0% | |
| ACATGTGGAATAGTTGTTCA+AGG | - | chr4.1:23668783-23668802 | MS.gene26638:intron | 35.0% | |
| ACCACAAGTGCTACAAATAA+AGG | + | chr4.1:23665911-23665930 | None:intergenic | 35.0% | |
| ACTCTTATGGTAGTTGTCAT+AGG | - | chr4.1:23667622-23667641 | MS.gene26638:intron | 35.0% | |
| AGATTAAGAACAGCTTAACC+TGG | + | chr4.1:23666438-23666457 | None:intergenic | 35.0% | |
| AGGATGCTGTTACATATTCA+AGG | - | chr4.1:23666110-23666129 | MS.gene26638:intron | 35.0% | |
| AGTTCATTCAAATGCAGGAA+TGG | - | chr4.1:23666710-23666729 | MS.gene26638:intron | 35.0% | |
| ATAGTTCCATGGAAATGTGA+GGG | - | chr4.1:23667129-23667148 | MS.gene26638:intron | 35.0% | |
| ATGGTACATTGGGTAGTAAA+TGG | - | chr4.1:23669191-23669210 | MS.gene26638:CDS | 35.0% | |
| ATTAAGCTGTTTACCCAAAC+AGG | + | chr4.1:23670439-23670458 | None:intergenic | 35.0% | |
| ATTACTTCAAACTTGGCACA+AGG | + | chr4.1:23671018-23671037 | None:intergenic | 35.0% | |
| ATTAGAGAGAGAAACTTGTG+AGG | - | chr4.1:23666072-23666091 | MS.gene26638:intron | 35.0% | |
| ATTCTTCATCTGACAGGATT+AGG | + | chr4.1:23668022-23668041 | None:intergenic | 35.0% | |
| CAAAAGTTCAAGAAAGTGGA+AGG | + | chr4.1:23668268-23668287 | None:intergenic | 35.0% | |
| CAAGATAATGCAGCAAAAGT+GGG | + | chr4.1:23667741-23667760 | None:intergenic | 35.0% | |
| CAGATCTAGCAATTTAACTC+TGG | - | chr4.1:23670789-23670808 | MS.gene26638:intron | 35.0% | |
| CATGTGGAATAGTTGTTCAA+GGG | - | chr4.1:23668784-23668803 | MS.gene26638:intron | 35.0% | |
| CCCATGAAAAATATCCAACA+GGG | + | chr4.1:23667467-23667486 | None:intergenic | 35.0% | |
| CTGATGGAGAAAAAACCAAA+TGG | + | chr4.1:23668872-23668891 | None:intergenic | 35.0% | |
| CTGGTAAATGAAAGTAAGAG+AGG | + | chr4.1:23668748-23668767 | None:intergenic | 35.0% | |
| CTTTATACCTTCCAGTTCAA+CGG | - | chr4.1:23670958-23670977 | MS.gene26638:CDS | 35.0% | |
| GAAGGACTTAACACCATAAT+TGG | - | chr4.1:23669758-23669777 | MS.gene26638:intron | 35.0% | |
| GATACTAGATCAGATTCAGA+TGG | + | chr4.1:23669094-23669113 | None:intergenic | 35.0% | |
| GATCTAGTATCAGTGTCTAT+TGG | - | chr4.1:23669103-23669122 | MS.gene26638:intron | 35.0% | |
| GGATTAGGCATTAAGTTTAC+AGG | + | chr4.1:23668007-23668026 | None:intergenic | 35.0% | |
| GGTTTACAAAATATACCCTG+CGG | - | chr4.1:23670915-23670934 | MS.gene26638:CDS | 35.0% | |
| GTTCAGTGGGATGTAAATTT+GGG | - | chr4.1:23666740-23666759 | MS.gene26638:CDS | 35.0% | |
| GTTGTTGAAGAAACTGAAAC+TGG | + | chr4.1:23665857-23665876 | None:intergenic | 35.0% | |
| GTTTACAAAATATACCCTGC+GGG | - | chr4.1:23670916-23670935 | MS.gene26638:CDS | 35.0% | |
| TAAAGCAGCATTGTCTAAGA+TGG | + | chr4.1:23669062-23669081 | None:intergenic | 35.0% | |
| TATAGTTCCATGGAAATGTG+AGG | - | chr4.1:23667128-23667147 | MS.gene26638:intron | 35.0% | |
| TGAAACTGGTAAACCTTCTT+GGG | + | chr4.1:23665843-23665862 | None:intergenic | 35.0% | |
| TGTTCAGTGGGATGTAAATT+TGG | - | chr4.1:23666739-23666758 | MS.gene26638:CDS | 35.0% | |
| TGTTTCTTCCTTTCCTTCTT+GGG | - | chr4.1:23668136-23668155 | MS.gene26638:CDS | 35.0% | |
| TTAAGCTGTTTACCCAAACA+GGG | + | chr4.1:23670438-23670457 | None:intergenic | 35.0% | |
| TTTATACCTTCCAGTTCAAC+GGG | - | chr4.1:23670959-23670978 | MS.gene26638:CDS | 35.0% | |
| TTTGTCATTGTCTACTAGGA+GGG | - | chr4.1:23667401-23667420 | MS.gene26638:intron | 35.0% | |
| ! | AGACCTCAAATTCTAAAAGG+TGG | - | chr4.1:23670880-23670899 | MS.gene26638:CDS | 35.0% |
| ! | AGTATGGTTCTATAGTTCCA+TGG | - | chr4.1:23667118-23667137 | MS.gene26638:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr4.1:23667006-23667025 | MS.gene26638:intron | 35.0% |
| ! | CATGTCCATAAGTTCTTTTC+TGG | + | chr4.1:23670582-23670601 | None:intergenic | 35.0% |
| ! | CCCTGTTGGATATTTTTCAT+GGG | - | chr4.1:23667464-23667483 | MS.gene26638:intron | 35.0% |
| ! | CTTAATAGGTGGAAGTATGA+AGG | - | chr4.1:23669901-23669920 | MS.gene26638:intron | 35.0% |
| ! | GAACAATTTCAAGTCCATAC+TGG | + | chr4.1:23668496-23668515 | None:intergenic | 35.0% |
| ! | GACCTCTAAACCTTTTCTAA+TGG | + | chr4.1:23666987-23667006 | None:intergenic | 35.0% |
| ! | GCAAATCAATCTCTTGTTGT+AGG | - | chr4.1:23669479-23669498 | MS.gene26638:intron | 35.0% |
| ! | GCTGTTCTTAATCTGTTTTG+TGG | - | chr4.1:23666444-23666463 | MS.gene26638:intron | 35.0% |
| ! | TCCCTGTTGGATATTTTTCA+TGG | - | chr4.1:23667463-23667482 | MS.gene26638:intron | 35.0% |
| ! | TGGTGGAAAATTTTATAGCG+GGG | - | chr4.1:23669386-23669405 | MS.gene26638:CDS | 35.0% |
| ! | TGGTTGAAGGTGATGATTTT+GGG | - | chr4.1:23666017-23666036 | MS.gene26638:CDS | 35.0% |
| ! | TTAAACTTGATGGCATCTCT+TGG | - | chr4.1:23670258-23670277 | MS.gene26638:intron | 35.0% |
| ! | TTATCTTGTTTGGAATACGG+AGG | - | chr4.1:23667753-23667772 | MS.gene26638:intron | 35.0% |
| ! | TTGTTTCTTCCTTTCCTTCT+TGG | - | chr4.1:23668135-23668154 | MS.gene26638:CDS | 35.0% |
| !! | GCTTTTTGAAAGAATTGGTG+GGG | - | chr4.1:23668299-23668318 | MS.gene26638:intron | 35.0% |
| !! | TGCAGAAGAAGTTTTGTAAG+AGG | + | chr4.1:23669462-23669481 | None:intergenic | 35.0% |
| !! | TGTTGATTTCAGAAGTCACT+TGG | - | chr4.1:23670984-23671003 | MS.gene26638:CDS | 35.0% |
| !!! | AAGGAACCTGTTTTTGTTTC+TGG | - | chr4.1:23666142-23666161 | MS.gene26638:intron | 35.0% |
| !!! | GCAAGAGCTTTTTCAGTTTT+TGG | + | chr4.1:23667519-23667538 | None:intergenic | 35.0% |
| !!! | GCTGCTTTTATTTCCAATTG+TGG | - | chr4.1:23667540-23667559 | MS.gene26638:intron | 35.0% |
| !!! | TTTTGGTTCTTGCTTCCATT+TGG | - | chr4.1:23668854-23668873 | MS.gene26638:intron | 35.0% |
| !!! | TTTTTTCAGTCACTTGTTGC+TGG | - | chr4.1:23668702-23668721 | MS.gene26638:intron | 35.0% |
| AAAATCTGGACTACTGATGC+AGG | + | chr4.1:23668164-23668183 | None:intergenic | 40.0% | |
| AAAGTCTATAGCTCACCATC+AGG | + | chr4.1:23666477-23666496 | None:intergenic | 40.0% | |
| ACAACAACAACAACCCAAGA+AGG | - | chr4.1:23665827-23665846 | MS.gene26638:CDS | 40.0% | |
| AGACTGTTAGGGAGATCTTA+TGG | + | chr4.1:23670618-23670637 | None:intergenic | 40.0% | |
| AGATGGAGTCCATTTACTTG+AGG | - | chr4.1:23670115-23670134 | MS.gene26638:intron | 40.0% | |
| AGGTTTAGAGGTCAATGAGT+TGG | - | chr4.1:23666994-23667013 | MS.gene26638:intron | 40.0% | |
| AGTTGTCATAGGAATCGTGA+TGG | - | chr4.1:23667633-23667652 | MS.gene26638:intron | 40.0% | |
| ATGGCATCTCTTGGTTTCTT+TGG | - | chr4.1:23670267-23670286 | MS.gene26638:intron | 40.0% | |
| CATTCTGTGAATGAGCTTTG+AGG | - | chr4.1:23669148-23669167 | MS.gene26638:intron | 40.0% | |
| CCATACAGGAACATGATTCA+GGG | + | chr4.1:23670851-23670870 | None:intergenic | 40.0% | |
| CTGAAACTGGTAAACCTTCT+TGG | + | chr4.1:23665844-23665863 | None:intergenic | 40.0% | |
| CTTTGTCATTGTCTACTAGG+AGG | - | chr4.1:23667400-23667419 | MS.gene26638:intron | 40.0% | |
| GAAATTTCGAGCACCACAAT+TGG | + | chr4.1:23667556-23667575 | None:intergenic | 40.0% | |
| GAATGGAAGTCATGTTCAGT+GGG | - | chr4.1:23666727-23666746 | MS.gene26638:CDS | 40.0% | |
| GCCCATGAAAAATATCCAAC+AGG | + | chr4.1:23667468-23667487 | None:intergenic | 40.0% | |
| TAGTTCCATGGAAATGTGAG+GGG | - | chr4.1:23667130-23667149 | MS.gene26638:intron | 40.0% | |
| TCAGCTCCAGAAACAAAAAC+AGG | + | chr4.1:23666151-23666170 | None:intergenic | 40.0% | |
| TCCATACAGGAACATGATTC+AGG | + | chr4.1:23670852-23670871 | None:intergenic | 40.0% | |
| TGATTAGCACTCGCAATGAA+AGG | + | chr4.1:23667255-23667274 | None:intergenic | 40.0% | |
| TGATTCTTTCAAAGCCCTTG+TGG | - | chr4.1:23669930-23669949 | MS.gene26638:intron | 40.0% | |
| TGTAAGAACAGCAGTCTTGA+AGG | + | chr4.1:23670818-23670837 | None:intergenic | 40.0% | |
| TGTAGCACTTGTGGTTATTG+CGG | - | chr4.1:23665916-23665935 | MS.gene26638:CDS | 40.0% | |
| TTATACCTTCCAGTTCAACG+GGG | - | chr4.1:23670960-23670979 | MS.gene26638:CDS | 40.0% | |
| TTCCTTCTCTCTACTCTTTG+TGG | + | chr4.1:23670001-23670020 | None:intergenic | 40.0% | |
| TTCTGCACCAACAGAAAATC+TGG | + | chr4.1:23668178-23668197 | None:intergenic | 40.0% | |
| TTGTCATTGTCTACTAGGAG+GGG | - | chr4.1:23667402-23667421 | MS.gene26638:intron | 40.0% | |
| TTTCAAAGCCCTTGTGGATA+TGG | - | chr4.1:23669936-23669955 | MS.gene26638:intron | 40.0% | |
| TTTGAAAGAATTGGTGGGGT+TGG | - | chr4.1:23668303-23668322 | MS.gene26638:intron | 40.0% | |
| ! | AACATCTCGATCGACTCTTA+TGG | - | chr4.1:23667609-23667628 | MS.gene26638:intron | 40.0% |
| ! | AATTTGGGTTTAATGGGGAC+CGG | - | chr4.1:23666755-23666774 | MS.gene26638:CDS | 40.0% |
| ! | CAGTAGTCCAGATTTTCTGT+TGG | - | chr4.1:23668168-23668187 | MS.gene26638:CDS | 40.0% |
| ! | GCCTTTATTTGTAGCACTTG+TGG | - | chr4.1:23665907-23665926 | MS.gene26638:CDS | 40.0% |
| ! | GGGTAATGCAGAAACTTTTG+TGG | - | chr4.1:23667150-23667169 | MS.gene26638:intron | 40.0% |
| ! | GGTGGAAAATTTTATAGCGG+GGG | - | chr4.1:23669387-23669406 | MS.gene26638:CDS | 40.0% |
| ! | GTGGTTGAAGGTGATGATTT+TGG | - | chr4.1:23666016-23666035 | MS.gene26638:CDS | 40.0% |
| ! | GTTTTCTGCTAGGTATCTCA+TGG | + | chr4.1:23669612-23669631 | None:intergenic | 40.0% |
| !! | AGCAAGTGTTCTGAGATCAA+TGG | - | chr4.1:23666819-23666838 | MS.gene26638:CDS | 40.0% |
| !! | AGGGCTTTGAAAGAATCAGA+TGG | + | chr4.1:23669928-23669947 | None:intergenic | 40.0% |
| !! | AGTTGGTGGTGGTAAGAATT+TGG | - | chr4.1:23666048-23666067 | MS.gene26638:intron | 40.0% |
| !! | GAAAATTTTATAGCGGGGGT+TGG | - | chr4.1:23669391-23669410 | MS.gene26638:CDS | 40.0% |
| !! | GCAAATTTGTGTTTGGTGTC+TGG | - | chr4.1:23666264-23666283 | MS.gene26638:intron | 40.0% |
| !! | TGTTCTGAGATCAATGGAGT+CGG | - | chr4.1:23666825-23666844 | MS.gene26638:CDS | 40.0% |
| !!! | GATTTTGGGTTAGAGACAGT+TGG | - | chr4.1:23666031-23666050 | MS.gene26638:CDS | 40.0% |
| !!! | GTTTTTGGGTAGGTTGGATA+TGG | - | chr4.1:23665946-23665965 | MS.gene26638:CDS | 40.0% |
| !!! | TCACGCGTTTTTTATCTGCA+GGG | - | chr4.1:23666501-23666520 | MS.gene26638:intron | 40.0% |
| !!! | TCGCCACCTTTTAGAATTTG+AGG | + | chr4.1:23670886-23670905 | None:intergenic | 40.0% |
| !!! | TTTTGTTTCTGGAGCTGAAC+AGG | - | chr4.1:23666153-23666172 | MS.gene26638:intron | 40.0% |
| AAGGTCGCTTCTTGAAGTCT+GGG | + | chr4.1:23670032-23670051 | None:intergenic | 45.0% | |
| AATCAACATCCCCGTTGAAC+TGG | + | chr4.1:23670972-23670991 | None:intergenic | 45.0% | |
| AGAAACTTGTGAGGAGTGGT+TGG | - | chr4.1:23666081-23666100 | MS.gene26638:intron | 45.0% | |
| AGAGAGAAACTTGTGAGGAG+TGG | - | chr4.1:23666077-23666096 | MS.gene26638:intron | 45.0% | |
| AGAGTCAGATGACCCTGTTT+GGG | - | chr4.1:23670423-23670442 | MS.gene26638:CDS | 45.0% | |
| AGCTAAATTTGTAGCGCGTC+AGG | + | chr4.1:23668638-23668657 | None:intergenic | 45.0% | |
| ATACGAGAGGGATGCAGAAA+AGG | + | chr4.1:23669706-23669725 | None:intergenic | 45.0% | |
| ATACGGAGGAACAAAGTCAC+TGG | - | chr4.1:23667767-23667786 | MS.gene26638:intron | 45.0% | |
| CAACGGTTCCGAAGAAGAAA+TGG | - | chr4.1:23665873-23665892 | MS.gene26638:CDS | 45.0% | |
| CATTACCCCTCACATTTCCA+TGG | + | chr4.1:23667138-23667157 | None:intergenic | 45.0% | |
| CCCTGAATCATGTTCCTGTA+TGG | - | chr4.1:23670848-23670867 | MS.gene26638:CDS | 45.0% | |
| CTGGGCTTCTTGAGCTTATT+TGG | - | chr4.1:23669806-23669825 | MS.gene26638:intron | 45.0% | |
| CTGGGTTGTAGATCGTAACA+TGG | - | chr4.1:23667786-23667805 | MS.gene26638:intron | 45.0% | |
| GCTAAATTTGTAGCGCGTCA+GGG | + | chr4.1:23668637-23668656 | None:intergenic | 45.0% | |
| GGAATGGAAGTCATGTTCAG+TGG | - | chr4.1:23666726-23666745 | MS.gene26638:CDS | 45.0% | |
| TACAGCTGCCATATCCACAA+GGG | + | chr4.1:23669947-23669966 | None:intergenic | 45.0% | |
| TACGGAGGAACAAAGTCACT+GGG | - | chr4.1:23667768-23667787 | MS.gene26638:intron | 45.0% | |
| TATGGCTAAGAACGCAGCTA+TGG | - | chr4.1:23665964-23665983 | MS.gene26638:CDS | 45.0% | |
| TGCAGAGAACAATCTTGCCA+TGG | - | chr4.1:23666858-23666877 | MS.gene26638:CDS | 45.0% | |
| TGCTAGGTATCTCATGGACT+TGG | + | chr4.1:23669606-23669625 | None:intergenic | 45.0% | |
| TGTTGTAGGAACTATCCCTG+TGG | - | chr4.1:23669493-23669512 | MS.gene26638:intron | 45.0% | |
| TTGTGGCCAAGTGAATGCAA+AGG | + | chr4.1:23669984-23670003 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4.1:23667075-23667094 | None:intergenic | 45.0% |
| ! | AGAGCATCTCTTGGTTTCTC+TGG | - | chr4.1:23670345-23670364 | MS.gene26638:intron | 45.0% |
| ! | ATGCTTCAGGGTTTTCTGCT+AGG | + | chr4.1:23669622-23669641 | None:intergenic | 45.0% |
| ! | ATGGGCTGAGTATGACATCA+TGG | - | chr4.1:23667482-23667501 | MS.gene26638:intron | 45.0% |
| ! | ATTGCGGAGATCGCGTTTTT+GGG | - | chr4.1:23665932-23665951 | MS.gene26638:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.1:23667076-23667095 | None:intergenic | 45.0% |
| ! | CATAGGAATCGTGATGGAAG+AGG | - | chr4.1:23667639-23667658 | MS.gene26638:intron | 45.0% |
| ! | GTTATTTCCACAAGCTCTCC+AGG | + | chr4.1:23670560-23670579 | None:intergenic | 45.0% |
| ! | TATTGCGGAGATCGCGTTTT+TGG | - | chr4.1:23665931-23665950 | MS.gene26638:CDS | 45.0% |
| ! | TCAGACTTCAGAGCATCTCT+TGG | - | chr4.1:23670336-23670355 | MS.gene26638:intron | 45.0% |
| ! | TCAGTCACTTGTTGCTGGTA+TGG | - | chr4.1:23668707-23668726 | MS.gene26638:intron | 45.0% |
| ! | TTTGGGTTAGAGACAGTTGG+TGG | - | chr4.1:23666034-23666053 | MS.gene26638:CDS | 45.0% |
| ! | TTTTGTCGCAGTGGACAAAC+TGG | - | chr4.1:23668608-23668627 | MS.gene26638:intron | 45.0% |
| !! | TGGTTGCTGACTTGTTCTAC+CGG | - | chr4.1:23665984-23666003 | MS.gene26638:CDS | 45.0% |
| !!! | GTCACGCGTTTTTTATCTGC+AGG | - | chr4.1:23666500-23666519 | MS.gene26638:intron | 45.0% |
| AACATCCCCGTTGAACTGGA+AGG | + | chr4.1:23670968-23670987 | None:intergenic | 50.0% | |
| AAGCTATCCTGGAGAGCTTG+TGG | - | chr4.1:23670550-23670569 | MS.gene26638:intron | 50.0% | |
| ACAATCTTGCCATGGCACGA+CGG | - | chr4.1:23666866-23666885 | MS.gene26638:CDS | 50.0% | |
| ACTGATGCAGGAACCCAAGA+AGG | + | chr4.1:23668152-23668171 | None:intergenic | 50.0% | |
| AGGGACGTCAGATGATAGAC+TGG | + | chr4.1:23667448-23667467 | None:intergenic | 50.0% | |
| CAAATGCAGCCTCAGGTTTC+CGG | + | chr4.1:23666777-23666796 | None:intergenic | 50.0% | |
| CAAGGTCGCTTCTTGAAGTC+TGG | + | chr4.1:23670033-23670052 | None:intergenic | 50.0% | |
| CACTGGACCTAAAGCATGGT+AGG | - | chr4.1:23667877-23667896 | MS.gene26638:intron | 50.0% | |
| CAGAGTCAGATGACCCTGTT+TGG | - | chr4.1:23670422-23670441 | MS.gene26638:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.1:23667074-23667093 | MS.gene26638:intron | 50.0% | |
| CTATCATCTGACGTCCCTGT+TGG | - | chr4.1:23667450-23667469 | MS.gene26638:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4.1:23667071-23667090 | None:intergenic | 50.0% | |
| GGAACTATCCCTGTGGTTGT+TGG | - | chr4.1:23669500-23669519 | MS.gene26638:intron | 50.0% | |
| GGCCACAAAGAGTAGAGAGA+AGG | - | chr4.1:23669996-23670015 | MS.gene26638:CDS | 50.0% | |
| GGTCTTTCAGGCTTCCATAC+AGG | + | chr4.1:23670865-23670884 | None:intergenic | 50.0% | |
| GTACAGCTGCCATATCCACA+AGG | + | chr4.1:23669948-23669967 | None:intergenic | 50.0% | |
| GTGTGCTCCTACCATGCTTT+AGG | + | chr4.1:23667887-23667906 | None:intergenic | 50.0% | |
| TGCAGGAACCCAAGAAGGAA+AGG | + | chr4.1:23668147-23668166 | None:intergenic | 50.0% | |
| TGCTTTCTGATGAGTGCCAC+TGG | - | chr4.1:23667860-23667879 | MS.gene26638:intron | 50.0% | |
| TGGCCAAGTGAATGCAAAGG+CGG | + | chr4.1:23669981-23670000 | None:intergenic | 50.0% | |
| TTGCCGCCTTTGCATTCACT+TGG | - | chr4.1:23669975-23669994 | MS.gene26638:CDS | 50.0% | |
| TTGGAGGACCAACAACCACA+GGG | + | chr4.1:23669511-23669530 | None:intergenic | 50.0% | |
| TTTGGAGGACCAACAACCAC+AGG | + | chr4.1:23669512-23669531 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.1:23667077-23667096 | None:intergenic | 50.0% |
| ! | CTACCATGCTTTAGGTCCAG+TGG | + | chr4.1:23667879-23667898 | None:intergenic | 50.0% |
| ! | CTCGCAATGAAAGGTACACC+TGG | + | chr4.1:23667246-23667265 | None:intergenic | 50.0% |
| ! | TTTGGCTTACCTCAGCAAGC+TGG | - | chr4.1:23666793-23666812 | MS.gene26638:CDS | 50.0% |
| !!! | GATCGCGTTTTTGGGTAGGT+TGG | - | chr4.1:23665940-23665959 | MS.gene26638:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4.1:23667063-23667082 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4.1:23667062-23667081 | MS.gene26638:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4.1:23667069-23667088 | MS.gene26638:intron | 55.0% | |
| CGGAAACCTGAGGCTGCATT+TGG | - | chr4.1:23666775-23666794 | MS.gene26638:CDS | 55.0% | |
| CTTGTTCTACCGGTCACGTG+CGG | - | chr4.1:23665994-23666013 | MS.gene26638:CDS | 55.0% | |
| GACCTTGCAAGTGCACTCGA+GGG | - | chr4.1:23670046-23670065 | MS.gene26638:CDS | 55.0% | |
| GGGCTTCGAGAGCTTGCAAT+CGG | + | chr4.1:23667578-23667597 | None:intergenic | 55.0% | |
| GGTAAGCCAAATGCAGCCTC+AGG | + | chr4.1:23666784-23666803 | None:intergenic | 55.0% | |
| TAATGGGGACCGGAAACCTG+AGG | - | chr4.1:23666765-23666784 | MS.gene26638:CDS | 55.0% | |
| TGAGGAGTGGTTGGAGAGAG+AGG | - | chr4.1:23666090-23666109 | MS.gene26638:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4.1:23667063-23667082 | MS.gene26638:intron | 55.0% | |
| ! | GTGCCACTGGACCTAAAGCA+TGG | - | chr4.1:23667873-23667892 | MS.gene26638:intron | 55.0% |
| !! | CTTGCTGTTCCAGCTTGCTG+AGG | + | chr4.1:23666805-23666824 | None:intergenic | 55.0% |
| !! | GGGTTAGAGACAGTTGGTGG+TGG | - | chr4.1:23666037-23666056 | MS.gene26638:CDS | 55.0% |
| !!! | CGGAGATCGCGTTTTTGGGT+AGG | - | chr4.1:23665936-23665955 | MS.gene26638:CDS | 55.0% |
| ATCTTGCCATGGCACGACGG+TGG | - | chr4.1:23666869-23666888 | MS.gene26638:CDS | 60.0% | |
| CGACCTTGCAAGTGCACTCG+AGG | - | chr4.1:23670045-23670064 | MS.gene26638:CDS | 60.0% | |
| CTTCAACCACCGCACGTGAC+CGG | + | chr4.1:23666006-23666025 | None:intergenic | 60.0% | |
| GACCCTCGAGTGCACTTGCA+AGG | + | chr4.1:23670051-23670070 | None:intergenic | 60.0% | |
| TCTTGCCATGGCACGACGGT+GGG | - | chr4.1:23666870-23666889 | MS.gene26638:CDS | 60.0% | |
| ACCCTGCGGGCTTGACACAG+AGG | - | chr4.1:23670929-23670948 | MS.gene26638:CDS | 65.0% | |
| CGGTCACGTGCGGTGGTTGA+AGG | - | chr4.1:23666004-23666023 | MS.gene26638:CDS | 65.0% | |
| GCCTCTGTGTCAAGCCCGCA+GGG | + | chr4.1:23670933-23670952 | None:intergenic | 65.0% | |
| GCTTACCCACCGTCGTGCCA+TGG | + | chr4.1:23666878-23666897 | None:intergenic | 65.0% | |
| GTTCTACCGGTCACGTGCGG+TGG | - | chr4.1:23665997-23666016 | MS.gene26638:CDS | 65.0% | |
| TGCCTCTGTGTCAAGCCCGC+AGG | + | chr4.1:23670934-23670953 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 23665803 | 23671047 | 23665803 | ID=MS.gene26638 |
| chr4.1 | mRNA | 23665803 | 23671047 | 23665803 | ID=MS.gene26638.t1;Parent=MS.gene26638 |
| chr4.1 | exon | 23670792 | 23671047 | 23670792 | ID=MS.gene26638.t1.exon1;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23670792 | 23671047 | 23670792 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23670370 | 23670449 | 23670370 | ID=MS.gene26638.t1.exon2;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23670370 | 23670449 | 23670370 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23669963 | 23670123 | 23669963 | ID=MS.gene26638.t1.exon3;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23669963 | 23670123 | 23669963 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23669190 | 23669431 | 23669190 | ID=MS.gene26638.t1.exon4;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23669190 | 23669431 | 23669190 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23668127 | 23668231 | 23668127 | ID=MS.gene26638.t1.exon5;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23668127 | 23668231 | 23668127 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23667193 | 23667349 | 23667193 | ID=MS.gene26638.t1.exon6;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23667193 | 23667349 | 23667193 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23666714 | 23666941 | 23666714 | ID=MS.gene26638.t1.exon7;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23666714 | 23666941 | 23666714 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| chr4.1 | exon | 23665803 | 23666058 | 23665803 | ID=MS.gene26638.t1.exon8;Parent=MS.gene26638.t1 |
| chr4.1 | CDS | 23665803 | 23666058 | 23665803 | ID=cds.MS.gene26638.t1;Parent=MS.gene26638.t1 |
| Gene Sequence |
| Protein sequence |
