AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27203

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27203.t1 MTR_2g023970 96.721 305 10 0 19 323 16 320 0.0 625
MS.gene27203.t1 MTR_4g132450 78.502 307 64 2 18 323 29 334 0.0 521
MS.gene27203.t1 MTR_4g123700 33.466 251 138 11 25 265 32 263 2.67e-28 111
MS.gene27203.t1 MTR_8g090055 28.309 272 147 13 22 272 25 269 3.60e-20 89.4
MS.gene27203.t1 MTR_4g105550 26.937 271 168 10 18 271 23 280 8.73e-19 85.5
MS.gene27203.t1 MTR_5g037310 27.308 260 156 10 23 265 23 266 2.23e-17 81.3
MS.gene27203.t1 MTR_5g037310 27.308 260 156 10 23 265 23 266 2.37e-17 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27203.t1 AT1G11915 65.894 302 99 4 25 323 29 329 1.28e-136 390
MS.gene27203.t1 AT3G17350 31.559 263 151 11 22 270 26 273 2.55e-23 97.8
MS.gene27203.t1 AT3G17350 31.746 252 145 10 22 261 26 262 3.93e-23 97.4
MS.gene27203.t1 AT5G50290 28.405 257 156 8 26 265 21 266 2.76e-19 87.0
MS.gene27203.t1 AT1G10380 28.175 252 155 9 26 263 28 267 5.19e-16 77.8
MS.gene27203.t1 AT1G10380 28.235 255 156 10 26 265 28 270 7.16e-16 77.4

Find 64 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAAGATTCACTTGCTTT+TGG 0.216568 2.1:+65044867 None:intergenic
TATGATCAAGTACCTGAATA+TGG 0.236309 2.1:-65044777 MS.gene27203:CDS
TTGGAATTGGAGCTGGTATT+TGG 0.243382 2.1:-65044066 MS.gene27203:CDS
CTAGTTATGCTAGTGTTTAT+TGG 0.264957 2.1:-65044824 MS.gene27203:CDS
GTGCTAGTGTCTAAACTAAA+TGG 0.287964 2.1:+65045089 None:intergenic
CATCCATCATCAATGCTAAA+TGG 0.290423 2.1:+65045290 None:intergenic
AAGTACCTGAATATGGGATT+AGG 0.329695 2.1:-65044770 MS.gene27203:CDS
TTCTCAGCTGCAGGGGCAAT+TGG 0.337882 2.1:-65044085 MS.gene27203:CDS
TTAAAATAGTCTATTATCAT+TGG 0.344931 2.1:+65043994 None:intergenic
AAGAAATTGCACAGCACAAT+AGG 0.351853 2.1:-65044237 MS.gene27203:CDS
GATAGAATGTGTCTATAGTA+TGG 0.357039 2.1:+65045260 None:intergenic
AGTGTTTATTGGAGGGATAT+TGG 0.378579 2.1:-65044813 MS.gene27203:CDS
TGTTCACAAAACATAGGCTT+TGG 0.380089 2.1:+65044996 None:intergenic
TTCTGTTACCTGCGATTACA+TGG 0.382922 2.1:+65044209 None:intergenic
CAAGATGAATCACAATGTTC+AGG 0.392043 2.1:+65044969 None:intergenic
TCAACCCTAATCCCATATTC+AGG 0.395794 2.1:+65044765 None:intergenic
CATAGCTTATGTTATGAACT+TGG 0.399689 2.1:+65045186 None:intergenic
GCTGCAGGGGCAATTGGAAT+TGG 0.402123 2.1:-65044079 MS.gene27203:CDS
CTCGAACTCAGAACACCTTC+CGG 0.413555 2.1:-65045215 MS.gene27203:CDS
CAAAAGCAAGTGAATCTTTG+AGG 0.416395 2.1:-65044866 MS.gene27203:CDS
AGTACCTGAATATGGGATTA+GGG 0.421546 2.1:-65044769 MS.gene27203:CDS
TGAAGACAACGAGTAGTAAC+AGG 0.427516 2.1:+65044732 None:intergenic
TACTCGTTGTCTTCAGTGTC+AGG 0.427643 2.1:-65044724 MS.gene27203:CDS
TATTCAGGTACTTGATCATA+AGG 0.447126 2.1:+65044780 None:intergenic
TATCCATTTAGCATTGATGA+TGG 0.462210 2.1:-65045293 MS.gene27203:CDS
TCCTCACATTTCCACATGAA+TGG 0.463278 2.1:+65045137 None:intergenic
GTTACAGCATTCTCAGCTGC+AGG 0.468617 2.1:-65044094 MS.gene27203:CDS
ATGATCAAGTACCTGAATAT+GGG 0.489019 2.1:-65044776 MS.gene27203:CDS
GTTATGCTAGTGTTTATTGG+AGG 0.492582 2.1:-65044821 MS.gene27203:CDS
GGAAAATGTTCACAAAACAT+AGG 0.507873 2.1:+65044990 None:intergenic
GTTATGAACTTGGTATCGAC+CGG 0.521862 2.1:+65045196 None:intergenic
TAAAAGGCTAAATAACAAAG+AGG 0.524336 2.1:-65046130 MS.gene27203:CDS
GGTACTTGATCATAAGGCTC+AGG 0.533579 2.1:+65044786 None:intergenic
TACTTATGTAGACATTTACC+AGG 0.534763 2.1:-65044933 MS.gene27203:CDS
TTATGCTAGTGTTTATTGGA+GGG 0.537025 2.1:-65044820 MS.gene27203:CDS
GTATGCAGAACTTCTTGTGC+TGG 0.539419 2.1:-65045329 MS.gene27203:CDS
GTTTGAACTCCACATGTGAC+TGG 0.542667 2.1:+65044016 None:intergenic
TTTAGCATTGATGATGGATG+TGG 0.543288 2.1:-65045287 MS.gene27203:CDS
TCAGTGTCAGGACACAATGA+AGG 0.554263 2.1:-65044712 MS.gene27203:CDS
AACTCCACTACACATTGTAA+AGG 0.560482 2.1:-65044627 MS.gene27203:intron
GGGGCAATTGGAATTGGAGC+TGG 0.569061 2.1:-65044073 MS.gene27203:CDS
AGGAAGGTCCATGTAATCGC+AGG 0.573932 2.1:-65044217 MS.gene27203:intron
TTACAGCATTCTCAGCTGCA+GGG 0.578537 2.1:-65044093 MS.gene27203:CDS
CATACCTTTACAATGTGTAG+TGG 0.589945 2.1:+65044623 None:intergenic
CAGGACACAATGAAGGGTGG+TGG 0.591439 2.1:-65044705 MS.gene27203:CDS
ATGAAGGGTGGTGGAACTTG+TGG 0.595707 2.1:-65044696 MS.gene27203:CDS
TGGAACTTGTGGATTTGATA+CGG 0.599283 2.1:-65044685 MS.gene27203:CDS
GGTGACAACAATGTGAGGAT+CGG 0.620294 2.1:+65045163 None:intergenic
GAATGGAAAATGTCAAGTGA+GGG 0.623475 2.1:-65046168 None:intergenic
CAGTGTCAGGACACAATGAA+GGG 0.624151 2.1:-65044711 MS.gene27203:CDS
TTGTCACCGATCCATTCATG+TGG 0.627050 2.1:-65045148 MS.gene27203:CDS
ACATTTCCACATGAATGGAT+CGG 0.629048 2.1:+65045142 None:intergenic
CGAATGGAAAATGTCAAGTG+AGG 0.631627 2.1:-65046169 None:intergenic
AAAAGGCTAAATAACAAAGA+GGG 0.632011 2.1:-65046129 MS.gene27203:intron
TCTAAACTAAATGGTCGCGT+AGG 0.632230 2.1:+65045098 None:intergenic
TACAGCATTCTCAGCTGCAG+GGG 0.645559 2.1:-65044092 MS.gene27203:CDS
AATTGCACAGCACAATAGGA+AGG 0.647476 2.1:-65044233 MS.gene27203:CDS
TGAACTTGGTATCGACCGGA+AGG 0.647859 2.1:+65045200 None:intergenic
GCTACTGCACCAGTCACATG+TGG 0.647888 2.1:-65044025 MS.gene27203:CDS
TTCATGTGGAAATGTGAGGA+TGG 0.661162 2.1:-65045134 MS.gene27203:CDS
GGATCGGTGACAACAATGTG+AGG 0.665381 2.1:+65045158 None:intergenic
TCCATTCATGTGGAAATGTG+AGG 0.693776 2.1:-65045138 MS.gene27203:CDS
TGTCAGGACACAATGAAGGG+TGG 0.712905 2.1:-65044708 MS.gene27203:CDS
ACTTATGTAGACATTTACCA+GGG 0.719135 2.1:-65044932 MS.gene27203:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCATAATTTATCAATTTA+AGG - chr2.1:65045835-65045854 MS.gene27203:intron 15.0%
!! CATTGTAGTATTAATTATAA+TGG + chr2.1:65044741-65044760 None:intergenic 15.0%
!! TTAAAATAGTCTATTATCAT+TGG + chr2.1:65046162-65046181 None:intergenic 15.0%
!! TTTAGATTATTCAAAGTTAT+AGG + chr2.1:65044305-65044324 None:intergenic 15.0%
!! AATACCTTAAACAATAGTTA+AGG - chr2.1:65044146-65044165 MS.gene27203:intron 20.0%
!! ACACATAATTCAATAGAATA+GGG + chr2.1:65045568-65045587 None:intergenic 20.0%
!! CTTTAAGTGCTAAATAAAAT+TGG + chr2.1:65044244-65044263 None:intergenic 20.0%
!! GTGAAAAATTAATGTGTAAA+AGG - chr2.1:65044007-65044026 MS.gene27203:CDS 20.0%
!! TACTGAAATAACAAAAACTT+GGG - chr2.1:65045996-65046015 MS.gene27203:intron 20.0%
!! TTACTGAAATAACAAAAACT+TGG - chr2.1:65045995-65046014 MS.gene27203:intron 20.0%
!!! ATTTAATTTTGTAGTGACTA+TGG + chr2.1:65044693-65044712 None:intergenic 20.0%
!!! GATTTAAATATTTTCAGATG+TGG - chr2.1:65044360-65044379 MS.gene27203:intron 20.0%
! AAAAGGCTAAATAACAAAGA+GGG - chr2.1:65044024-65044043 MS.gene27203:CDS 25.0%
! AATAACAAAGAGGGTAAAAT+TGG - chr2.1:65044033-65044052 MS.gene27203:CDS 25.0%
! ATGAGAGAATATGAATTGAT+TGG - chr2.1:65045872-65045891 MS.gene27203:intron 25.0%
! CATTCCTTAACTATTGTTTA+AGG + chr2.1:65044153-65044172 None:intergenic 25.0%
! GACACATAATTCAATAGAAT+AGG + chr2.1:65045569-65045588 None:intergenic 25.0%
! TAAAAGGCTAAATAACAAAG+AGG - chr2.1:65044023-65044042 MS.gene27203:CDS 25.0%
! TTTGCAGAGTTATATTACAA+GGG + chr2.1:65044396-65044415 None:intergenic 25.0%
!! AAGGGAACAAATATTTTTCA+TGG + chr2.1:65045591-65045610 None:intergenic 25.0%
!! ATTTTCACCACTTAAAAAGT+AGG - chr2.1:65044471-65044490 MS.gene27203:intron 25.0%
!! TTTTGCAGAGTTATATTACA+AGG + chr2.1:65044397-65044416 None:intergenic 25.0%
!!! AAGTTTTTTGTGTTTGTGTA+AGG - chr2.1:65045498-65045517 MS.gene27203:intron 25.0%
!!! TTTACTTTTGCTTTATGCAT+TGG + chr2.1:65044570-65044589 None:intergenic 25.0%
!!! TTTGAGTAATTTTCAAGTAC+CGG - chr2.1:65045698-65045717 MS.gene27203:intron 25.0%
AATCAGATTAAGAAACCAAG+AGG - chr2.1:65044598-65044617 MS.gene27203:intron 30.0%
ACTTATGTAGACATTTACCA+GGG - chr2.1:65045221-65045240 MS.gene27203:CDS 30.0%
ATCAGATTAAGAAACCAAGA+GGG - chr2.1:65044599-65044618 MS.gene27203:intron 30.0%
ATGATCAAGTACCTGAATAT+GGG - chr2.1:65045377-65045396 MS.gene27203:intron 30.0%
CATAGCTTATGTTATGAACT+TGG + chr2.1:65044970-65044989 None:intergenic 30.0%
CTAGTTATGCTAGTGTTTAT+TGG - chr2.1:65045329-65045348 MS.gene27203:CDS 30.0%
GATAGAATGTGTCTATAGTA+TGG + chr2.1:65044896-65044915 None:intergenic 30.0%
GGAAAATGTTCACAAAACAT+AGG + chr2.1:65045166-65045185 None:intergenic 30.0%
TACCTACAATAGTGTTATGT+TGG + chr2.1:65045752-65045771 None:intergenic 30.0%
TACTTATGTAGACATTTACC+AGG - chr2.1:65045220-65045239 MS.gene27203:CDS 30.0%
TATGATCAAGTACCTGAATA+TGG - chr2.1:65045376-65045395 MS.gene27203:intron 30.0%
TATTCAGGTACTTGATCATA+AGG + chr2.1:65045376-65045395 None:intergenic 30.0%
TTATGCTAGTGTTTATTGGA+GGG - chr2.1:65045333-65045352 MS.gene27203:CDS 30.0%
! AATGTACTAGTTTCGAGTAA+AGG + chr2.1:65045610-65045629 None:intergenic 30.0%
! ATGTACTAGTTTCGAGTAAA+GGG + chr2.1:65045609-65045628 None:intergenic 30.0%
! GAATTTTCGAAGATTTGTAG+GGG - chr2.1:65044055-65044074 MS.gene27203:CDS 30.0%
! GGAATTTTCGAAGATTTGTA+GGG - chr2.1:65044054-65044073 MS.gene27203:CDS 30.0%
! TCTCTAGAAATTAAAGCTCA+TGG + chr2.1:65045671-65045690 None:intergenic 30.0%
! TGCTTTTATATATTCCCTCT+TGG + chr2.1:65044616-65044635 None:intergenic 30.0%
! TGGAATTTTCGAAGATTTGT+AGG - chr2.1:65044053-65044072 MS.gene27203:CDS 30.0%
! TTGATTGGCTAATGTTTGTT+TGG - chr2.1:65045887-65045906 MS.gene27203:intron 30.0%
! TTTTTGTGTTTGTGTAAGGA+TGG - chr2.1:65045502-65045521 MS.gene27203:intron 30.0%
!! ATTGAGATTTTGTTGTGACT+AGG + chr2.1:65044799-65044818 None:intergenic 30.0%
!! GGAAGAGTGTTGAAAAATTA+AGG + chr2.1:65044672-65044691 None:intergenic 30.0%
!! TATCCATTTAGCATTGATGA+TGG - chr2.1:65044860-65044879 MS.gene27203:CDS 30.0%
!!! GGTTTTTCCTACTTTTTAAG+TGG + chr2.1:65044481-65044500 None:intergenic 30.0%
!!! TTCGAGTTTTTTTTCTGAGT+CGG + chr2.1:65044924-65044943 None:intergenic 30.0%
AAAATTTCCCATTTGCTCTC+AGG - chr2.1:65044106-65044125 MS.gene27203:intron 35.0%
AACTCCACTACACATTGTAA+AGG - chr2.1:65045526-65045545 MS.gene27203:intron 35.0%
AAGAAATTGCACAGCACAAT+AGG - chr2.1:65045916-65045935 MS.gene27203:intron 35.0%
AAGTACCTGAATATGGGATT+AGG - chr2.1:65045383-65045402 MS.gene27203:intron 35.0%
ACATTTCCACATGAATGGAT+CGG + chr2.1:65045014-65045033 None:intergenic 35.0%
AGTACCTGAATATGGGATTA+GGG - chr2.1:65045384-65045403 MS.gene27203:intron 35.0%
AGTGTTTATTGGAGGGATAT+TGG - chr2.1:65045340-65045359 MS.gene27203:CDS 35.0%
CAAAAGCAAGTGAATCTTTG+AGG - chr2.1:65045287-65045306 MS.gene27203:CDS 35.0%
CAAGATGAATCACAATGTTC+AGG + chr2.1:65045187-65045206 None:intergenic 35.0%
CATACCTTTACAATGTGTAG+TGG + chr2.1:65045533-65045552 None:intergenic 35.0%
CATCCATCATCAATGCTAAA+TGG + chr2.1:65044866-65044885 None:intergenic 35.0%
GTCCAACATAACACTATTGT+AGG - chr2.1:65045747-65045766 MS.gene27203:intron 35.0%
GTGCTAGTGTCTAAACTAAA+TGG + chr2.1:65045067-65045086 None:intergenic 35.0%
GTTATGCTAGTGTTTATTGG+AGG - chr2.1:65045332-65045351 MS.gene27203:CDS 35.0%
TGGAACTTGTGGATTTGATA+CGG - chr2.1:65045468-65045487 MS.gene27203:intron 35.0%
TGTTCACAAAACATAGGCTT+TGG + chr2.1:65045160-65045179 None:intergenic 35.0%
TTAAGAGAAAAAGAACACCC+TGG + chr2.1:65045241-65045260 None:intergenic 35.0%
! CTCAAAGATTCACTTGCTTT+TGG + chr2.1:65045289-65045308 None:intergenic 35.0%
! GAGCTTTAATTTCTAGAGAG+CGG - chr2.1:65045672-65045691 MS.gene27203:intron 35.0%
! TGCTTTATGCATTGGTAAGT+TGG + chr2.1:65044562-65044581 None:intergenic 35.0%
! TTTATGCATTGGTAAGTTGG+TGG + chr2.1:65044559-65044578 None:intergenic 35.0%
!! GTTGTTTTGTCTTGGAATTG+TGG - chr2.1:65046025-65046044 MS.gene27203:intron 35.0%
!! TTTAGCATTGATGATGGATG+TGG - chr2.1:65044866-65044885 MS.gene27203:CDS 35.0%
AAGTATATGTGTCGGGGTAT+AGG - chr2.1:65044081-65044100 MS.gene27203:CDS 40.0%
AATTGCACAGCACAATAGGA+AGG - chr2.1:65045920-65045939 MS.gene27203:intron 40.0%
AGTATATGTGTCGGGGTATA+GGG - chr2.1:65044082-65044101 MS.gene27203:CDS 40.0%
ATACGTGGTCTATTGTTGAC+CGG + chr2.1:65045720-65045739 None:intergenic 40.0%
CAATAGACCACGTATCAAGA+CGG - chr2.1:65045725-65045744 MS.gene27203:intron 40.0%
CATAATGCCTGAGAGCAAAT+GGG + chr2.1:65044116-65044135 None:intergenic 40.0%
GATCAATATGTGTCTCTCTG+AGG + chr2.1:65044502-65044521 None:intergenic 40.0%
GTCTTGGAATTGTGGTTTCA+GGG - chr2.1:65046033-65046052 MS.gene27203:intron 40.0%
TCAACCCTAATCCCATATTC+AGG + chr2.1:65045391-65045410 None:intergenic 40.0%
TCATAATGCCTGAGAGCAAA+TGG + chr2.1:65044117-65044136 None:intergenic 40.0%
TCCATTCATGTGGAAATGTG+AGG - chr2.1:65045015-65045034 MS.gene27203:CDS 40.0%
TCCTCACATTTCCACATGAA+TGG + chr2.1:65045019-65045038 None:intergenic 40.0%
TCTAAACTAAATGGTCGCGT+AGG + chr2.1:65045058-65045077 None:intergenic 40.0%
TGAAGACAACGAGTAGTAAC+AGG + chr2.1:65045424-65045443 None:intergenic 40.0%
TGACTAGGAGTAATGAGAGA+AGG + chr2.1:65044784-65044803 None:intergenic 40.0%
TGTCTTGGAATTGTGGTTTC+AGG - chr2.1:65046032-65046051 MS.gene27203:intron 40.0%
TTCATGTGGAAATGTGAGGA+TGG - chr2.1:65045019-65045038 MS.gene27203:CDS 40.0%
TTCTGTTACCTGCGATTACA+TGG + chr2.1:65045947-65045966 None:intergenic 40.0%
TTGGAATTGGAGCTGGTATT+TGG - chr2.1:65046087-65046106 MS.gene27203:intron 40.0%
! AGGGGTGAAAGTATATGTGT+CGG - chr2.1:65044073-65044092 MS.gene27203:CDS 40.0%
!! GTTATGAACTTGGTATCGAC+CGG + chr2.1:65044960-65044979 None:intergenic 40.0%
!!! GGCTCATTGTTGTTTTGTCT+TGG - chr2.1:65046017-65046036 MS.gene27203:intron 40.0%
CAGTGTCAGGACACAATGAA+GGG - chr2.1:65045442-65045461 MS.gene27203:intron 45.0%
CTAGGAGTAATGAGAGAAGG+AGG + chr2.1:65044781-65044800 None:intergenic 45.0%
GGTACTTGATCATAAGGCTC+AGG + chr2.1:65045370-65045389 None:intergenic 45.0%
GGTGACAACAATGTGAGGAT+CGG + chr2.1:65044993-65045012 None:intergenic 45.0%
GTATGCAGAACTTCTTGTGC+TGG - chr2.1:65044824-65044843 MS.gene27203:CDS 45.0%
GTTTGAACTCCACATGTGAC+TGG + chr2.1:65046140-65046159 None:intergenic 45.0%
TACTCGTTGTCTTCAGTGTC+AGG - chr2.1:65045429-65045448 MS.gene27203:intron 45.0%
TCAGTGTCAGGACACAATGA+AGG - chr2.1:65045441-65045460 MS.gene27203:intron 45.0%
TTACAGCATTCTCAGCTGCA+GGG - chr2.1:65046060-65046079 MS.gene27203:intron 45.0%
TTGTCACCGATCCATTCATG+TGG - chr2.1:65045005-65045024 MS.gene27203:CDS 45.0%
! GGGGTGAAAGTATATGTGTC+GGG - chr2.1:65044074-65044093 MS.gene27203:CDS 45.0%
! GGGTGAAAGTATATGTGTCG+GGG - chr2.1:65044075-65044094 MS.gene27203:CDS 45.0%
!! TTGGTGGTGACACAGAAAGA+AGG + chr2.1:65044543-65044562 None:intergenic 45.0%
!! AATAATCTAAATTATTATTA+TGG - chr2.1:65044314-65044333 MS.gene27203:intron 5.0%
!! ATTAAATAAAAAAAAATCAT+AGG - chr2.1:65044275-65044294 MS.gene27203:intron 5.0%
AGGAAGGTCCATGTAATCGC+AGG - chr2.1:65045936-65045955 MS.gene27203:intron 50.0%
CTCGAACTCAGAACACCTTC+CGG - chr2.1:65044938-65044957 MS.gene27203:CDS 50.0%
GGATCGGTGACAACAATGTG+AGG + chr2.1:65044998-65045017 None:intergenic 50.0%
GTTACAGCATTCTCAGCTGC+AGG - chr2.1:65046059-65046078 MS.gene27203:intron 50.0%
TACAGCATTCTCAGCTGCAG+GGG - chr2.1:65046061-65046080 MS.gene27203:intron 50.0%
TGTCAGGACACAATGAAGGG+TGG - chr2.1:65045445-65045464 MS.gene27203:intron 50.0%
TGTTGGACCGTCTTGATACG+TGG + chr2.1:65045735-65045754 None:intergenic 50.0%
!! ATGAAGGGTGGTGGAACTTG+TGG - chr2.1:65045457-65045476 MS.gene27203:intron 50.0%
!! TGAACTTGGTATCGACCGGA+AGG + chr2.1:65044956-65044975 None:intergenic 50.0%
CAGGACACAATGAAGGGTGG+TGG - chr2.1:65045448-65045467 MS.gene27203:intron 55.0%
GCTACTGCACCAGTCACATG+TGG - chr2.1:65046128-65046147 MS.gene27203:intron 55.0%
GCTGCAGGGGCAATTGGAAT+TGG - chr2.1:65046074-65046093 MS.gene27203:intron 55.0%
GGGGCAATTGGAATTGGAGC+TGG - chr2.1:65046080-65046099 MS.gene27203:intron 55.0%
TTCTCAGCTGCAGGGGCAAT+TGG - chr2.1:65046068-65046087 MS.gene27203:intron 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 65043994 65046181 65043994 ID=MS.gene27203
chr2.1 mRNA 65043994 65046181 65043994 ID=MS.gene27203.t1;Parent=MS.gene27203
chr2.1 exon 65046130 65046181 65046130 ID=MS.gene27203.t1.exon1;Parent=MS.gene27203.t1
chr2.1 CDS 65046130 65046181 65046130 ID=cds.MS.gene27203.t1;Parent=MS.gene27203.t1
chr2.1 exon 65044628 65045374 65044628 ID=MS.gene27203.t1.exon2;Parent=MS.gene27203.t1
chr2.1 CDS 65044628 65045374 65044628 ID=cds.MS.gene27203.t1;Parent=MS.gene27203.t1
chr2.1 exon 65044218 65044262 65044218 ID=MS.gene27203.t1.exon3;Parent=MS.gene27203.t1
chr2.1 CDS 65044218 65044262 65044218 ID=cds.MS.gene27203.t1;Parent=MS.gene27203.t1
chr2.1 exon 65043994 65044121 65043994 ID=MS.gene27203.t1.exon4;Parent=MS.gene27203.t1
chr2.1 CDS 65043994 65044121 65043994 ID=cds.MS.gene27203.t1;Parent=MS.gene27203.t1
Gene Sequence

>MS.gene27203

ATGTCAAGTGAGGGTGAAAAATTAATGTGTAAAAGGCTAAATAACAAAGAGGGTAAAATTGGAATTTTCGAAGATTTGTAGGGGTGAAAGTATATGTGTCGGGGTATAGGGTAAAATTTCCCATTTGCTCTCAGGCATTATGAACTAACGAAAATACCTTAAACAATAGTTAAGGAATGTTAACAAAGTTAACAATAGTTAATTTTAACTCGTTTTCAATTCTTTTTTAAAACAATGACAGTGCATACCAATTTTATTTAGCACTTAAAGTATATACACTAATTAAATAAAAAAAAATCATAGGCAAACCTATAACTTTGAATAATCTAAATTATTATTATGGACTTGATTAAACTATTGTGTGTTGATTTAAATATTTTCAGATGTGGATACAGCACACCCTTGTAATATAACTCTGCAAAAACTTCATGTATTGTGTAACTAATATTACTAAATTTGTTATACACTGCATCTTCAATTTTCACCACTTAAAAAGTAGGAAAAACCTCAGAGAGACACATATTGATCATTACTTAGTACACTAATCCTTCTTTCTGTGTCACCACCAACTTACCAATGCATAAAGCAAAAGTAAATAGAACAAAATCAGATTAAGAAACCAAGAGGGAATATATAAAAGCAAAGAGACTCTAAAAGCAACACTTCAGCTATATTCCTTAATTTTTCAACACTCTTCCATAGTCACTACAAAATTAAATCATATAGTTCTCTATACAATTAGATCCATTATAATTAATACTACAATGTTATTACTATTTACACACCTCCTTCTCTCATTACTCCTAGTCACAACAAAATCTCAATCAAGCGTATGCAGAACTTCTTGTGCTGGCATTTCAATCAAATATCCATTTAGCATTGATGATGGATGTGGAAGTCCATACTATAGACACATTCTATCTTGTTCCGACTCAGAAAAAAAACTCGAACTCAGAACACCTTCCGGTCGATACCAAGTTCATAACATAAGCTATGCCGATCCTCACATTGTTGTCACCGATCCATTCATGTGGAAATGTGAGGATGGCGAAAATTTTCGACCTACGCGACCATTTAGTTTAGACACTAGCACAAAATTGAAACTCTCTACACAAAATGAGTACATGTTTTTCAACTGTAGTGAAAAACATGTAATCATTCAACCAAAGCCTATGTTTTGTGAACATTTTCCTGAACATTGTGATTCATCTTGTGACAGTGCTAGCTACTTATGTAGACATTTACCAGGGTGTTCTTTTTCTCTTAAAAGTAGTTCTTGTTGTTCTTATTATCCAAAAGCAAGTGAATCTTTGAGGTTGATGCTTAAGTATTGTACTAGTTATGCTAGTGTTTATTGGAGGGATATTGGTTTTCCTGAGCCTTATGATCAAGTACCTGAATATGGGATTAGGGTTGATTTTGATATACCTGTTACTACTCGTTGTCTTCAGTGTCAGGACACAATGAAGGGTGGTGGAACTTGTGGATTTGATACGGTGACACAAAGTTTTTTGTGTTTGTGTAAGGATGGAAACTCCACTACACATTGTAAAGGTATGCTCAAAATATTACCCTATTCTATTGAATTATGTGTCCATGAAAAATATTTGTTCCCTTTACTCGAAACTAGTACATTTAATCATATCACTATCTAAGTTGTGAAGACGAATAAGACCATGAGCTTTAATTTCTAGAGAGCGGTGTTTTGAGTAATTTTCAAGTACCGGTCAACAATAGACCACGTATCAAGACGGTCCAACATAACACTATTGTAGGTATTTATGCATAGTAAATGATTTAAACTCAAATAAAGTCGTTCACATGTTTTTTAGATTGAAAAGATGCATAATTTATCAATTTAAGGTTTTCTTAAGTTGAATGAGAGAATATGAATTGATTGGCTAATGTTTGTTTGGCAGATCAAGAAATTGCACAGCACAATAGGAAGGTCCATGTAATCGCAGGTAACAGAAATAAACTAACTTTCATTAACTAGATATGTTACTGAAATAACAAAAACTTGGGCTCATTGTTGTTTTGTCTTGGAATTGTGGTTTCAGGGACAGTTACAGCATTCTCAGCTGCAGGGGCAATTGGAATTGGAGCTGGTATTTGGTACTTGAAGAAATTGAGAGCTACTGCACCAGTCACATGTGGAGTTCAAACCAATGATAATAGACTATTTTAA
Protein sequence

>MS.gene27203.t1

MSSEGEKLMCKRLNNKEVTTKSQSSVCRTSCAGISIKYPFSIDDGCGSPYYRHILSCSDSEKKLELRTPSGRYQVHNISYADPHIVVTDPFMWKCEDGENFRPTRPFSLDTSTKLKLSTQNEYMFFNCSEKHVIIQPKPMFCEHFPEHCDSSCDSASYLCRHLPGCSFSLKSSSCCSYYPKASESLRLMLKYCTSYASVYWRDIGFPEPYDQVPEYGIRVDFDIPVTTRCLQCQDTMKGGGTCGFDTVTQSFLCLCKDGNSTTHCKDQEIAQHNRKVHVIAGTVTAFSAAGAIGIGAGIWYLKKLRATAPVTCGVQTNDNRLF