Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27242.t1 | XP_013466067.1 | 96.9 | 490 | 15 | 0 | 313 | 802 | 18 | 507 | 3.00E-269 | 937.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27242.t1 | Q9SUK9 | 58.1 | 485 | 178 | 6 | 317 | 800 | 1 | 461 | 2.8e-143 | 510.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27242.t1 | A0A072VER9 | 96.9 | 490 | 15 | 0 | 313 | 802 | 18 | 507 | 2.2e-269 | 937.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene27242 | 0.829575 | 4.77E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27242.t1 | MTR_1g022030 | 96.939 | 490 | 15 | 0 | 313 | 802 | 18 | 507 | 0.0 | 972 |
| MS.gene27242.t1 | MTR_5g019790 | 65.595 | 311 | 96 | 4 | 499 | 800 | 139 | 447 | 6.11e-132 | 400 |
| MS.gene27242.t1 | MTR_2g008590 | 39.431 | 246 | 142 | 5 | 555 | 797 | 1012 | 1253 | 3.85e-40 | 160 |
| MS.gene27242.t1 | MTR_3g031360 | 35.000 | 300 | 172 | 8 | 518 | 800 | 16 | 309 | 1.43e-39 | 149 |
| MS.gene27242.t1 | MTR_3g449470 | 32.086 | 187 | 118 | 4 | 74 | 252 | 24 | 209 | 1.93e-22 | 97.1 |
| MS.gene27242.t1 | MTR_7g033205 | 31.098 | 164 | 108 | 3 | 69 | 228 | 1 | 163 | 9.64e-18 | 81.6 |
| MS.gene27242.t1 | MTR_4g069580 | 29.448 | 163 | 110 | 3 | 69 | 230 | 1 | 159 | 1.23e-13 | 70.1 |
| MS.gene27242.t1 | MTR_8g101620 | 30.714 | 140 | 78 | 1 | 172 | 311 | 45 | 165 | 3.45e-12 | 66.2 |
| MS.gene27242.t1 | MTR_8g027132 | 29.940 | 167 | 92 | 3 | 113 | 279 | 8 | 149 | 3.55e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27242.t1 | AT4G16580 | 58.642 | 486 | 174 | 8 | 317 | 800 | 1 | 461 | 0.0 | 532 |
| MS.gene27242.t1 | AT5G66720 | 55.779 | 398 | 149 | 7 | 411 | 800 | 36 | 414 | 5.23e-136 | 409 |
| MS.gene27242.t1 | AT5G66720 | 55.276 | 398 | 148 | 7 | 411 | 800 | 36 | 411 | 9.37e-135 | 406 |
| MS.gene27242.t1 | AT4G33500 | 40.876 | 274 | 151 | 6 | 527 | 797 | 454 | 719 | 3.42e-49 | 186 |
| MS.gene27242.t1 | AT2G30170 | 36.162 | 271 | 150 | 8 | 545 | 800 | 36 | 298 | 1.30e-41 | 154 |
| MS.gene27242.t1 | AT2G30170 | 41.176 | 187 | 103 | 5 | 555 | 737 | 10 | 193 | 3.58e-35 | 134 |
| MS.gene27242.t1 | AT2G30170 | 40.609 | 197 | 109 | 6 | 545 | 737 | 36 | 228 | 5.27e-35 | 134 |
| MS.gene27242.t1 | AT2G30170 | 34.211 | 228 | 129 | 6 | 587 | 800 | 1 | 221 | 2.25e-33 | 128 |
| MS.gene27242.t1 | AT2G30170 | 38.961 | 154 | 88 | 4 | 587 | 737 | 1 | 151 | 8.84e-27 | 108 |
| MS.gene27242.t1 | AT2G30170 | 39.333 | 150 | 87 | 4 | 545 | 692 | 36 | 183 | 1.02e-24 | 103 |
| MS.gene27242.t1 | AT2G02650 | 30.128 | 312 | 199 | 10 | 15 | 311 | 36 | 343 | 2.53e-24 | 106 |
| MS.gene27242.t1 | AT4G29090 | 26.846 | 298 | 206 | 8 | 16 | 305 | 257 | 550 | 1.90e-22 | 102 |
| MS.gene27242.t1 | AT3G09510 | 26.299 | 308 | 198 | 8 | 16 | 306 | 162 | 457 | 3.18e-22 | 101 |
| MS.gene27242.t1 | AT3G25270 | 25.321 | 312 | 198 | 8 | 16 | 305 | 18 | 316 | 1.04e-20 | 94.7 |
| MS.gene27242.t1 | AT2G30170 | 34.356 | 163 | 87 | 5 | 652 | 800 | 2 | 158 | 1.38e-19 | 87.0 |
| MS.gene27242.t1 | AT2G34320 | 25.468 | 267 | 189 | 7 | 46 | 305 | 4 | 267 | 1.90e-19 | 90.1 |
Find 232 sgRNAs with CRISPR-Local
Find 552 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGATCGTGTCCTTTC+TGG | -0.025475 | 1.3:+2974824 | MS.gene27242:CDS |
| CAGATGAGGTTAGTGTATTT+TGG | 0.146145 | 1.3:-2972883 | None:intergenic |
| GGGGCTTCATGCTATTAATT+TGG | 0.151378 | 1.3:+2977324 | MS.gene27242:intron |
| GGTGATGGCCGTTGGGGTTT+GGG | 0.181988 | 1.3:+2973393 | MS.gene27242:CDS |
| TGGCAGATGGTGTTGGTGGC+TGG | 0.185449 | 1.3:+2976485 | MS.gene27242:CDS |
| ACAAACCAATGTTAACTTCT+TGG | 0.188028 | 1.3:+2973080 | MS.gene27242:CDS |
| TGTATCAGGGCCGTCGATTC+AGG | 0.192634 | 1.3:+2974790 | MS.gene27242:CDS |
| AACCTTTGATAGATCTTATT+GGG | 0.219358 | 1.3:+2973605 | MS.gene27242:CDS |
| AAACCTTTGATAGATCTTAT+TGG | 0.225861 | 1.3:+2973604 | MS.gene27242:CDS |
| TTTGGGAGACAGCGGGTTTA+TGG | 0.225912 | 1.3:+2977342 | MS.gene27242:CDS |
| CCACCAGTTTCTTCTTTATC+AGG | 0.229621 | 1.3:-2976418 | None:intergenic |
| GTTTCATATATTACTGGTTC+TGG | 0.231801 | 1.3:+2979576 | MS.gene27242:CDS |
| GGGTGATGGCCGTTGGGGTT+TGG | 0.251625 | 1.3:+2973392 | MS.gene27242:CDS |
| CAAAGAATTGGCTCAGTTCT+TGG | 0.267377 | 1.3:+2975083 | MS.gene27242:CDS |
| AGCTGGGTCAACTGAACCTT+TGG | 0.284646 | 1.3:-2976584 | None:intergenic |
| TTCATTCTGGCTTGAGCTGC+TGG | 0.286502 | 1.3:-2972821 | None:intergenic |
| GATTGCAGGAAAACTCCTTC+TGG | 0.289392 | 1.3:+2976352 | MS.gene27242:intron |
| CTTCTTACATATACCAGATT+TGG | 0.296368 | 1.3:+2973157 | MS.gene27242:CDS |
| CTATGAGACCAAAACCTATC+AGG | 0.297706 | 1.3:-2973747 | None:intergenic |
| CCTCTTGGGTGATGGCCGTT+GGG | 0.302759 | 1.3:+2973386 | MS.gene27242:CDS |
| GCAACCCTGTTTGTGCGTCC+TGG | 0.307639 | 1.3:+2974677 | MS.gene27242:CDS |
| CTTCGTTAAGGATCATGATT+TGG | 0.320833 | 1.3:+2973527 | MS.gene27242:CDS |
| CTGTAATCTCATTATTGTAT+AGG | 0.322126 | 1.3:-2979377 | None:intergenic |
| GCAGATGTTGGTGTCAATTC+TGG | 0.323413 | 1.3:+2976508 | MS.gene27242:CDS |
| GGGCTTCATGCTATTAATTT+GGG | 0.328685 | 1.3:+2977325 | MS.gene27242:CDS |
| AAAACCCTGAAGCTGGTATC+TGG | 0.329156 | 1.3:+2976376 | MS.gene27242:CDS |
| GGCAGATGGTGTTGGTGGCT+GGG | 0.332939 | 1.3:+2976486 | MS.gene27242:CDS |
| TCAAAACACCGGGGACATAA+AGG | 0.334618 | 1.3:-2972970 | None:intergenic |
| CCAATTCAGTAGATGCTATT+CGG | 0.336559 | 1.3:+2976554 | MS.gene27242:CDS |
| CAACCCTGTTTGTGCGTCCT+GGG | 0.337623 | 1.3:+2974678 | MS.gene27242:CDS |
| AAACTCTGGACTGGAATCTA+AGG | 0.342507 | 1.3:-2974705 | None:intergenic |
| GTGTATTTGAAGAGTGGTTT+GGG | 0.349722 | 1.3:+2974974 | MS.gene27242:CDS |
| CATAGTGATTTACCTAGTTC+TGG | 0.350198 | 1.3:+2977448 | MS.gene27242:CDS |
| GTTGTAGTTTCATATATTAC+TGG | 0.351541 | 1.3:+2979570 | MS.gene27242:CDS |
| CCGAATAGCATCTACTGAAT+TGG | 0.352505 | 1.3:-2976554 | None:intergenic |
| GATGCTGGATTTCGTTACTA+TGG | 0.353715 | 1.3:+2979525 | MS.gene27242:CDS |
| CAACCCCAGGACGCACAAAC+AGG | 0.357358 | 1.3:-2974682 | None:intergenic |
| GTGATGGCCGTTGGGGTTTG+GGG | 0.361148 | 1.3:+2973394 | MS.gene27242:CDS |
| ACCTCTTGGGTGATGGCCGT+TGG | 0.362175 | 1.3:+2973385 | MS.gene27242:CDS |
| ACAATGGCTGCCCGTTTACC+TGG | 0.365693 | 1.3:+2974869 | MS.gene27242:CDS |
| ACATTGATCGTGTCCTTTCT+GGG | 0.366181 | 1.3:+2974825 | MS.gene27242:CDS |
| CAACGTGGATGCTCACCTCT+TGG | 0.366890 | 1.3:+2973371 | MS.gene27242:CDS |
| ACAAAAGTTGGGACTCCCTT+TGG | 0.367376 | 1.3:+2972845 | MS.gene27242:CDS |
| TGGTGGCTACTAAGATTGTT+AGG | 0.377535 | 1.3:+2973451 | MS.gene27242:CDS |
| AGCTGCATTGGCACGTCAAC+GGG | 0.378440 | 1.3:+2979458 | MS.gene27242:CDS |
| TTTCATATATTACTGGTTCT+GGG | 0.380099 | 1.3:+2979577 | MS.gene27242:CDS |
| TCAACTGCTGCTCAAGATGC+TGG | 0.383804 | 1.3:+2979510 | MS.gene27242:CDS |
| GGGCTGCCAGGGACCCTGAT+AGG | 0.388330 | 1.3:+2973733 | MS.gene27242:CDS |
| TTGTTCAAAGTTGAGGGTGA+GGG | 0.388731 | 1.3:-2973061 | None:intergenic |
| AACCGTCAGCAGCCAGATAA+TGG | 0.389477 | 1.3:+2975028 | MS.gene27242:CDS |
| CATGTTGCTGCACTGGTGAC+TGG | 0.390404 | 1.3:-2977390 | None:intergenic |
| TTTACAGTTGCTGTTGCTCC+TGG | 0.391227 | 1.3:+2979315 | MS.gene27242:CDS |
| CAAAATACACTAACCTCATC+TGG | 0.396447 | 1.3:+2972884 | MS.gene27242:CDS |
| GGAGGCGAACCAGAGTTGTT+TGG | 0.400123 | 1.3:-2973037 | None:intergenic |
| CTGCACTGGTGACTGGAATA+TGG | 0.401639 | 1.3:-2977383 | None:intergenic |
| CAACAACCATCCCAGGTAAA+CGG | 0.402713 | 1.3:-2974880 | None:intergenic |
| CAATTCAGTAGATGCTATTC+GGG | 0.403313 | 1.3:+2976555 | MS.gene27242:CDS |
| CATCATTGCTCTTACTGATC+AGG | 0.404301 | 1.3:+2976663 | MS.gene27242:CDS |
| TTGAAGAGTGGTTTGGGGAA+TGG | 0.405503 | 1.3:+2974980 | MS.gene27242:CDS |
| GGGAAATTGTGGTTTGGTAC+TGG | 0.406055 | 1.3:+2974605 | MS.gene27242:CDS |
| AGATAGCTCGTTGGGCTGCC+AGG | 0.411984 | 1.3:+2973721 | MS.gene27242:CDS |
| AGAAGCCCTTCACTTCGTTA+AGG | 0.415991 | 1.3:+2973515 | MS.gene27242:CDS |
| CGTTTACCTGGGATGGTTGT+TGG | 0.416691 | 1.3:+2974881 | MS.gene27242:CDS |
| TCTTGGCATTATACACAGTC+AGG | 0.419386 | 1.3:+2975100 | MS.gene27242:CDS |
| TCTGTAATGCTGCAAAGAAT+TGG | 0.419883 | 1.3:+2975071 | MS.gene27242:CDS |
| AGCTCATGAGATAGCTCGTT+GGG | 0.421184 | 1.3:+2973713 | MS.gene27242:CDS |
| TTGAAAGAGGTTTGCCTTGG+TGG | 0.424044 | 1.3:-2972929 | None:intergenic |
| TTCGCTGGAGTCCTCCTTCA+AGG | 0.424536 | 1.3:+2973334 | MS.gene27242:CDS |
| ATTGGTTTGTTCAAAGTTGA+GGG | 0.424553 | 1.3:-2973067 | None:intergenic |
| AGCTCGTGTTGCTGAAGCCT+TGG | 0.426599 | 1.3:+2973485 | MS.gene27242:CDS |
| TCACGGGCAGCGGTGTCAAC+GGG | 0.430484 | 1.3:-2975184 | None:intergenic |
| TTGGTATTCGCGTAATCAAC+TGG | 0.430647 | 1.3:+2973176 | MS.gene27242:CDS |
| GATTCTGCTGAGATTCTGAT+TGG | 0.432016 | 1.3:+2974578 | MS.gene27242:CDS |
| GACAAAACGTAGTGGAAATC+AGG | 0.432033 | 1.3:+2973689 | MS.gene27242:CDS |
| GGTTGTCCGACGGAGTTTGA+TGG | 0.434071 | 1.3:-2973290 | None:intergenic |
| ACATCTTTATGAGTTGCGTT+TGG | 0.434876 | 1.3:+2973013 | MS.gene27242:CDS |
| TGTGTATTTGAAGAGTGGTT+TGG | 0.435964 | 1.3:+2974973 | MS.gene27242:CDS |
| GTTGGTGGCTGGGCAGATGT+TGG | 0.436846 | 1.3:+2976496 | MS.gene27242:CDS |
| AACAACCATCCCAGGTAAAC+GGG | 0.437702 | 1.3:-2974879 | None:intergenic |
| AACGTGGATGCTCACCTCTT+GGG | 0.440123 | 1.3:+2973372 | MS.gene27242:CDS |
| GCCAGAATGAAGACAAAAGT+TGG | 0.445525 | 1.3:+2972833 | MS.gene27242:CDS |
| TCAACGGGCACGTCATGAGC+AGG | 0.449090 | 1.3:-2975169 | None:intergenic |
| TTGGAGTTTGCTTCCATCAC+CGG | 0.449201 | 1.3:-2973219 | None:intergenic |
| TTGCTTCTCCTCACGGGCAG+CGG | 0.450123 | 1.3:-2975194 | None:intergenic |
| GATGGTGAAGAGGCGTATTG+TGG | 0.450490 | 1.3:-2973272 | None:intergenic |
| GATTACGCGAATACCAAATC+TGG | 0.452267 | 1.3:-2973170 | None:intergenic |
| CATCCTGATAAAGAAGAAAC+TGG | 0.454023 | 1.3:+2976415 | MS.gene27242:CDS |
| TGCAGAGCTGCAACATTCGC+TGG | 0.455105 | 1.3:+2973319 | MS.gene27242:CDS |
| ATGATCCAGATACCAGCTTC+AGG | 0.455949 | 1.3:-2976381 | None:intergenic |
| AACTTACAGTTCAGATGAAT+CGG | 0.459438 | 1.3:-2975227 | None:intergenic |
| GTGAAGGAAGGAGAGCGCTT+TGG | 0.460004 | 1.3:-2973238 | None:intergenic |
| ATTGGCACGTCAACGGGCTC+TGG | 0.461845 | 1.3:+2979464 | MS.gene27242:CDS |
| TGATTTACCTAGTTCTGGTC+AGG | 0.462764 | 1.3:+2977453 | MS.gene27242:CDS |
| ATCTGGAGAATTCAGCATAA+TGG | 0.463700 | 1.3:+2972901 | MS.gene27242:CDS |
| TGAAAGAGGTTTGCCTTGGT+GGG | 0.464108 | 1.3:-2972928 | None:intergenic |
| GATGCTCACCTCTTGGGTGA+TGG | 0.465049 | 1.3:+2973378 | MS.gene27242:CDS |
| CATTATACACAGTCAGGGTA+TGG | 0.465846 | 1.3:+2975106 | MS.gene27242:CDS |
| TCAACATCGTGTAACTCTGC+TGG | 0.469118 | 1.3:+2975145 | MS.gene27242:CDS |
| ATTGCAGGAAAACTCCTTCT+GGG | 0.469361 | 1.3:+2976353 | MS.gene27242:intron |
| CCTGGGATGGTTGTTGGTGA+AGG | 0.470886 | 1.3:+2974887 | MS.gene27242:CDS |
| CAAAACACCGGGGACATAAA+GGG | 0.471559 | 1.3:-2972969 | None:intergenic |
| GCTGGGTCAACTGAACCTTT+GGG | 0.472030 | 1.3:-2976583 | None:intergenic |
| ATTACAGCGGTGGTGGTTCA+TGG | 0.473357 | 1.3:+2979393 | MS.gene27242:CDS |
| GCTCGTGTTGCTGAAGCCTT+GGG | 0.475523 | 1.3:+2973486 | MS.gene27242:CDS |
| GGACAAGGGAAATTGTGGTT+TGG | 0.476056 | 1.3:+2974599 | MS.gene27242:CDS |
| TCGCTGGAGTCCTCCTTCAA+GGG | 0.479861 | 1.3:+2973335 | MS.gene27242:CDS |
| CCTGGCGATGTCATAGTTGC+TGG | 0.481034 | 1.3:+2979333 | MS.gene27242:CDS |
| AAGAGTGGTTTGGGGAATGG+TGG | 0.481077 | 1.3:+2974983 | MS.gene27242:CDS |
| CTCACGGGCAGCGGTGTCAA+CGG | 0.481126 | 1.3:-2975185 | None:intergenic |
| GGGTTTATGGTTATCCGTGA+TGG | 0.481265 | 1.3:+2977355 | MS.gene27242:CDS |
| TTTGTTCAAAGTTGAGGGTG+AGG | 0.484082 | 1.3:-2973062 | None:intergenic |
| TTTAGCTACAAACTCTGGAC+TGG | 0.484699 | 1.3:-2974714 | None:intergenic |
| AGTTGACCCAGCTAGGGTGC+TGG | 0.488462 | 1.3:+2976594 | MS.gene27242:CDS |
| TTTGGGGATGATTCTGCGAC+GGG | 0.488685 | 1.3:+2973410 | MS.gene27242:CDS |
| TTTCAATTTCACCTATCAGT+TGG | 0.489616 | 1.3:+2977414 | MS.gene27242:CDS |
| CATTGGTTTGTTCAAAGTTG+AGG | 0.489844 | 1.3:-2973068 | None:intergenic |
| ATGATTCTGCGACGGGAGGA+TGG | 0.491328 | 1.3:+2973417 | MS.gene27242:CDS |
| ACTACTACATTCCAACTGAT+AGG | 0.493268 | 1.3:-2977425 | None:intergenic |
| GAATAAGCACATACCGGTGA+TGG | 0.497223 | 1.3:+2973206 | MS.gene27242:CDS |
| CTCTTGGGTGATGGCCGTTG+GGG | 0.498750 | 1.3:+2973387 | MS.gene27242:CDS |
| TTCAAAGTTGAGGGTGAGGG+GGG | 0.498872 | 1.3:-2973058 | None:intergenic |
| ATACTCAAGCACAAAAGCTA+AGG | 0.499738 | 1.3:+2976624 | MS.gene27242:CDS |
| TTCTGGGAAAACCCTGAAGC+TGG | 0.502935 | 1.3:+2976369 | MS.gene27242:CDS |
| TGTTCAAAGTTGAGGGTGAG+GGG | 0.503465 | 1.3:-2973060 | None:intergenic |
| TTGAAATCATGTTGCTGCAC+TGG | 0.504521 | 1.3:-2977397 | None:intergenic |
| TGAGAGTACCTCGTTGAAAG+AGG | 0.505731 | 1.3:-2972942 | None:intergenic |
| AACGGGCTCTGGACAAAGAC+AGG | 0.507075 | 1.3:+2979475 | MS.gene27242:CDS |
| GTTCAAAGTTGAGGGTGAGG+GGG | 0.508871 | 1.3:-2973059 | None:intergenic |
| GTTTCTTCTTTATCAGGATG+AGG | 0.510151 | 1.3:-2976412 | None:intergenic |
| GGCTGCCCGTTTACCTGGGA+TGG | 0.510912 | 1.3:+2974874 | MS.gene27242:CDS |
| TGATAGATCTTATTGGGGAA+AGG | 0.513071 | 1.3:+2973611 | MS.gene27242:CDS |
| ACATAAATTCTATCCTATCC+AGG | 0.513718 | 1.3:-2973665 | None:intergenic |
| TAGCTGCATTGGCACGTCAA+CGG | 0.516599 | 1.3:+2979457 | MS.gene27242:CDS |
| CACCATTATCTGGCTGCTGA+CGG | 0.517141 | 1.3:-2975030 | None:intergenic |
| CAGTTGTTGATACGCTGTCT+AGG | 0.517189 | 1.3:+2974750 | MS.gene27242:CDS |
| AGCTCAGAAGATAGCTGCAT+TGG | 0.518202 | 1.3:+2979446 | MS.gene27242:CDS |
| ATGGTGAAGAGGCGTATTGT+GGG | 0.518535 | 1.3:-2973271 | None:intergenic |
| AAGGTTCAGTTGACCCAGCT+AGG | 0.520272 | 1.3:+2976587 | MS.gene27242:CDS |
| CCAATGTTAACTTCTTGGAC+TGG | 0.521342 | 1.3:+2973085 | MS.gene27242:CDS |
| ATCTTCTGAGCTGTGACCTG+AGG | 0.522667 | 1.3:-2979435 | None:intergenic |
| TGATCCAGATACCAGCTTCA+GGG | 0.524510 | 1.3:-2976380 | None:intergenic |
| CCAAAACCTATCAGGGTCCC+TGG | 0.525259 | 1.3:-2973739 | None:intergenic |
| AAGAGCTGGCTTCAGCCCTC+AGG | 0.527103 | 1.3:+2979419 | MS.gene27242:CDS |
| GTGGTTCATGGTGTAAGAGC+TGG | 0.528391 | 1.3:+2979405 | MS.gene27242:CDS |
| CCAGAATGAAGACAAAAGTT+GGG | 0.531164 | 1.3:+2972834 | MS.gene27242:CDS |
| ATAAATACCTGACCAGAACT+AGG | 0.531604 | 1.3:-2977460 | None:intergenic |
| TCTTGAGCAGCAGTTGAGAA+AGG | 0.533955 | 1.3:-2979504 | None:intergenic |
| TTTCGGTTCCGTCTGTATCA+GGG | 0.536479 | 1.3:+2974777 | MS.gene27242:CDS |
| AGCTTGAGAAGACCCCTTGA+AGG | 0.541203 | 1.3:-2973348 | None:intergenic |
| TGATTGGACAAGGGAAATTG+TGG | 0.541904 | 1.3:+2974594 | MS.gene27242:CDS |
| TAATGAGATTACAGCGGTGG+TGG | 0.542755 | 1.3:+2979386 | MS.gene27242:CDS |
| GAAAGAGGTTTGCCTTGGTG+GGG | 0.544081 | 1.3:-2972927 | None:intergenic |
| CCAGCAACTATGACATCGCC+AGG | 0.545852 | 1.3:-2979333 | None:intergenic |
| ACTCGACTCTGAAGCGTGGT+CGG | 0.546727 | 1.3:+2974921 | MS.gene27242:CDS |
| TTCATATATTACTGGTTCTG+GGG | 0.547042 | 1.3:+2979578 | MS.gene27242:CDS |
| TTCCTTTGAATCAAAACACC+GGG | 0.547848 | 1.3:-2972980 | None:intergenic |
| AATAGTGTGTATTTGAAGAG+TGG | 0.548547 | 1.3:+2974968 | MS.gene27242:CDS |
| GAAACTTGTCAGCCCCAGAA+AGG | 0.548899 | 1.3:-2974838 | None:intergenic |
| TGGATAGGATAGAATTTATG+TGG | 0.550874 | 1.3:+2973667 | MS.gene27242:CDS |
| CTATTAATTTGGGAGACAGC+GGG | 0.551334 | 1.3:+2977335 | MS.gene27242:CDS |
| CATGATCCTTAACGAAGTGA+AGG | 0.551380 | 1.3:-2973521 | None:intergenic |
| TCTTCTGAGCTGTGACCTGA+GGG | 0.554819 | 1.3:-2979434 | None:intergenic |
| GCGTTTGGACCAAACAACTC+TGG | 0.556037 | 1.3:+2973028 | MS.gene27242:CDS |
| TCGTTGAAAGAGGTTTGCCT+TGG | 0.556759 | 1.3:-2972932 | None:intergenic |
| CCAGTCCAAGAAGTTAACAT+TGG | 0.557461 | 1.3:-2973085 | None:intergenic |
| CATTGATCGTGTCCTTTCTG+GGG | 0.558260 | 1.3:+2974826 | MS.gene27242:CDS |
| GGATGGAGGCACAGTTGTGG+TGG | 0.559742 | 1.3:+2973434 | MS.gene27242:CDS |
| GTTTGGGGATGATTCTGCGA+CGG | 0.560322 | 1.3:+2973409 | MS.gene27242:CDS |
| CGATGTCATAGTTGCTGGTA+CGG | 0.565323 | 1.3:+2979338 | MS.gene27242:CDS |
| CGTTGACACCGCTGCCCGTG+AGG | 0.569655 | 1.3:+2975186 | MS.gene27242:CDS |
| TCAGTGACCCTTTATGTCCC+CGG | 0.569720 | 1.3:+2972962 | MS.gene27242:CDS |
| GGAGGATGGAGGCACAGTTG+TGG | 0.572626 | 1.3:+2973431 | MS.gene27242:CDS |
| TATGAGACCAAAACCTATCA+GGG | 0.573439 | 1.3:-2973746 | None:intergenic |
| CAATGGCTGCCCGTTTACCT+GGG | 0.574522 | 1.3:+2974870 | MS.gene27242:CDS |
| CGCTGGAGTCCTCCTTCAAG+GGG | 0.574810 | 1.3:+2973336 | MS.gene27242:CDS |
| GTCATAGTTGCTGGTACGGA+CGG | 0.579719 | 1.3:+2979342 | MS.gene27242:CDS |
| GATAGCTCGTTGGGCTGCCA+GGG | 0.582811 | 1.3:+2973722 | MS.gene27242:CDS |
| CAAGTTTCAAATTAAAACAA+TGG | 0.585777 | 1.3:+2974853 | MS.gene27242:CDS |
| TCCCCAATAAGATCTATCAA+AGG | 0.587450 | 1.3:-2973607 | None:intergenic |
| TGTTGCAGCTCTGCATGCTA+AGG | 0.588188 | 1.3:-2973311 | None:intergenic |
| GGGGATGATTCTGCGACGGG+AGG | 0.591206 | 1.3:+2973413 | MS.gene27242:CDS |
| GGAGTGGCAGATGGTGTTGG+TGG | 0.594180 | 1.3:+2976481 | MS.gene27242:CDS |
| TATGCTGAATTCTCCAGATG+AGG | 0.595828 | 1.3:-2972897 | None:intergenic |
| ACCTTTGATAGATCTTATTG+GGG | 0.597787 | 1.3:+2973606 | MS.gene27242:CDS |
| TGAGGAACAAGCAGTAGGAG+TGG | 0.599865 | 1.3:+2976465 | MS.gene27242:CDS |
| CCTTCACCAACAACCATCCC+AGG | 0.599884 | 1.3:-2974887 | None:intergenic |
| AACCCTGTTTGTGCGTCCTG+GGG | 0.599939 | 1.3:+2974679 | MS.gene27242:CDS |
| TACTCAAGCACAAAAGCTAA+GGG | 0.600793 | 1.3:+2976625 | MS.gene27242:CDS |
| AACCCCAGGACGCACAAACA+GGG | 0.600847 | 1.3:-2974681 | None:intergenic |
| AGGTTCAGTTGACCCAGCTA+GGG | 0.601349 | 1.3:+2976588 | MS.gene27242:CDS |
| GACGGAGTTTGATGGTGAAG+AGG | 0.603639 | 1.3:-2973282 | None:intergenic |
| CAGCTCATGAGATAGCTCGT+TGG | 0.611015 | 1.3:+2973712 | MS.gene27242:CDS |
| CTTCCTTTGAATCAAAACAC+CGG | 0.611345 | 1.3:-2972981 | None:intergenic |
| AATATATGAAACTACAACTG+TGG | 0.611636 | 1.3:-2979565 | None:intergenic |
| TAACTACAAACCTGAATCGA+CGG | 0.613330 | 1.3:-2974800 | None:intergenic |
| GGAATATGGTGCAACCATCA+CGG | 0.613975 | 1.3:-2977369 | None:intergenic |
| ATGATCCTTAACGAAGTGAA+GGG | 0.615583 | 1.3:-2973520 | None:intergenic |
| TTGAGAAGACCCCTTGAAGG+AGG | 0.617050 | 1.3:-2973345 | None:intergenic |
| CTTGGCATTATACACAGTCA+GGG | 0.621009 | 1.3:+2975101 | MS.gene27242:CDS |
| CTGGAATCTAAGGCAACCCC+AGG | 0.622359 | 1.3:-2974695 | None:intergenic |
| GCTATTAATTTGGGAGACAG+CGG | 0.622818 | 1.3:+2977334 | MS.gene27242:CDS |
| GCTGAGATTCTGATTGGACA+AGG | 0.625579 | 1.3:+2974584 | MS.gene27242:CDS |
| CAATAATGAGATTACAGCGG+TGG | 0.626436 | 1.3:+2979383 | MS.gene27242:CDS |
| TGTTCTGAGGAACAAGCAGT+AGG | 0.626439 | 1.3:+2976460 | MS.gene27242:CDS |
| GCTGGATTTCGTTACTATGG+CGG | 0.630991 | 1.3:+2979528 | MS.gene27242:CDS |
| CCTGATAAAGAAGAAACTGG+TGG | 0.633611 | 1.3:+2976418 | MS.gene27242:CDS |
| TTCTACTGATCACGATACCA+TGG | 0.634675 | 1.3:+2973125 | MS.gene27242:CDS |
| GTAGGAGTGGCAGATGGTGT+TGG | 0.635159 | 1.3:+2976478 | MS.gene27242:CDS |
| GCTACTAAGATTGTTAGGAG+TGG | 0.635468 | 1.3:+2973456 | MS.gene27242:CDS |
| GTAAGAAGCGATCAATGCCA+TGG | 0.637069 | 1.3:-2973142 | None:intergenic |
| GAATCATCCCCAAACCCCAA+CGG | 0.639334 | 1.3:-2973401 | None:intergenic |
| CAACGGGCACGTCATGAGCA+GGG | 0.640312 | 1.3:-2975168 | None:intergenic |
| CAAGCAGTAGGAGTGGCAGA+TGG | 0.642191 | 1.3:+2976472 | MS.gene27242:CDS |
| CTGAGATTCTGATTGGACAA+GGG | 0.643946 | 1.3:+2974585 | MS.gene27242:CDS |
| TCTTCACCATCAAACTCCGT+CGG | 0.643995 | 1.3:+2973284 | MS.gene27242:CDS |
| TTCAGTAGATGCTATTCGGG+AGG | 0.644585 | 1.3:+2976558 | MS.gene27242:CDS |
| AAGGGCTTCTAAGATACCCA+AGG | 0.654857 | 1.3:-2973502 | None:intergenic |
| GCTATTCGGGAGGAGCCCAA+AGG | 0.654895 | 1.3:+2976568 | MS.gene27242:CDS |
| ATTCTGCGACGGGAGGATGG+AGG | 0.655813 | 1.3:+2973420 | MS.gene27242:CDS |
| AAACGCAACTCATAAAGATG+TGG | 0.656538 | 1.3:-2973011 | None:intergenic |
| TGCATGCTAAGGTTGTCCGA+CGG | 0.657299 | 1.3:-2973300 | None:intergenic |
| CACTTAAAACGATACAAGCG+TGG | 0.657649 | 1.3:-2973638 | None:intergenic |
| TGTATTTGAAGAGTGGTTTG+GGG | 0.667530 | 1.3:+2974975 | MS.gene27242:CDS |
| ATCGACGGCCCTGATACAGA+CGG | 0.668956 | 1.3:-2974785 | None:intergenic |
| TTTATGTGGACAAAACGTAG+TGG | 0.677919 | 1.3:+2973681 | MS.gene27242:CDS |
| GCATAATGGTCTCCCCACCA+AGG | 0.680453 | 1.3:+2972915 | MS.gene27242:CDS |
| CCCAACGGCCATCACCCAAG+AGG | 0.688108 | 1.3:-2973386 | None:intergenic |
| GGGTCTTCTCAAGCTCAACG+TGG | 0.700269 | 1.3:+2973356 | MS.gene27242:CDS |
| GATAACTCGACTCTGAAGCG+TGG | 0.712114 | 1.3:+2974917 | MS.gene27242:CDS |
| TCCTTTGAATCAAAACACCG+GGG | 0.745007 | 1.3:-2972979 | None:intergenic |
| ATACAATAATGAGATTACAG+CGG | 0.761392 | 1.3:+2979380 | MS.gene27242:CDS |
| AAGGCAAACCTCTTTCAACG+AGG | 0.797643 | 1.3:+2972934 | MS.gene27242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAATTATTGAGAAA+AGG | - | chr1.3:2974278-2974297 | None:intergenic | 10.0% |
| !! | AAAATAAATTATTGAGAAAA+GGG | - | chr1.3:2974277-2974296 | None:intergenic | 10.0% |
| !! | TAAATATATAAACTGAATAA+AGG | - | chr1.3:2977758-2977777 | None:intergenic | 10.0% |
| !! | TAATAATAATAATTAATTGC+AGG | + | chr1.3:2974346-2974365 | MS.gene27242:intron | 10.0% |
| !!! | ATTAAACAAACATATATTTT+AGG | - | chr1.3:2977651-2977670 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTAATTGTTTTG+TGG | + | chr1.3:2974308-2974327 | MS.gene27242:intron | 10.0% |
| !!! | TAATTAATCTGTTTTTTTAA+CGG | - | chr1.3:2974068-2974087 | None:intergenic | 10.0% |
| !!! | TTTATAATTTCAGATAATTT+TGG | - | chr1.3:2973898-2973917 | None:intergenic | 10.0% |
| !! | AAAAGTAATTGAAGAAAATA+AGG | - | chr1.3:2974205-2974224 | None:intergenic | 15.0% |
| !! | AAAATACACTTGTTTATTAA+AGG | + | chr1.3:2978673-2978692 | MS.gene27242:intron | 15.0% |
| !! | AAAGTAATTGAAGAAAATAA+GGG | - | chr1.3:2974204-2974223 | None:intergenic | 15.0% |
| !! | AAATAAAAAAGTAAGCATTT+AGG | - | chr1.3:2978605-2978624 | None:intergenic | 15.0% |
| !! | AAATAAATTATTGAGAAAAG+GGG | - | chr1.3:2974276-2974295 | None:intergenic | 15.0% |
| !! | AGATTAGATTAGATTATTAA+TGG | - | chr1.3:2973974-2973993 | None:intergenic | 15.0% |
| !! | TGTATCAATTAATCAATTAA+TGG | - | chr1.3:2977907-2977926 | None:intergenic | 15.0% |
| !! | TTGTTACAATATATCTTATT+TGG | + | chr1.3:2977257-2977276 | MS.gene27242:intron | 15.0% |
| !!! | AAATTATACCTATTTTATTC+TGG | - | chr1.3:2978067-2978086 | None:intergenic | 15.0% |
| !!! | AATTAATCAATTAATGGATA+AGG | - | chr1.3:2977901-2977920 | None:intergenic | 15.0% |
| !!! | ATTAATCAATTAATGGATAA+GGG | - | chr1.3:2977900-2977919 | None:intergenic | 15.0% |
| !!! | ATTACATAATCATATCTTTT+TGG | - | chr1.3:2973800-2973819 | None:intergenic | 15.0% |
| !!! | ATTTTCTTCAATTACTTTTA+GGG | + | chr1.3:2974206-2974225 | MS.gene27242:intron | 15.0% |
| !!! | TAAACAAGTGTATTTTAATT+TGG | - | chr1.3:2978669-2978688 | None:intergenic | 15.0% |
| !!! | TAATTAAGTTTTATAATCCT+TGG | + | chr1.3:2977667-2977686 | MS.gene27242:intron | 15.0% |
| !!! | TATTTTCTTCAATTACTTTT+AGG | + | chr1.3:2974205-2974224 | MS.gene27242:intron | 15.0% |
| !!! | TTTTAGTTGAACATTTTTAT+GGG | + | chr1.3:2973872-2973891 | MS.gene27242:intron | 15.0% |
| !! | AAAAAAAAAGAGAGAGATTT+GGG | - | chr1.3:2976188-2976207 | None:intergenic | 20.0% |
| !! | AAAAACCATTATAATAGAAC+AGG | - | chr1.3:2973829-2973848 | None:intergenic | 20.0% |
| !! | AAAACCATTATAATAGAACA+GGG | - | chr1.3:2973828-2973847 | None:intergenic | 20.0% |
| !! | AAAATGTCAAGGTTAAATTA+TGG | - | chr1.3:2976067-2976086 | None:intergenic | 20.0% |
| !! | AATCTATGATCTGATTATAA+TGG | - | chr1.3:2975271-2975290 | None:intergenic | 20.0% |
| !! | AATTAAATGATTGTAATGGT+AGG | + | chr1.3:2978890-2978909 | MS.gene27242:intron | 20.0% |
| !! | ATATATTGTAACAACTAACA+AGG | - | chr1.3:2977251-2977270 | None:intergenic | 20.0% |
| !! | ATGTCAATTATCAAATTAGA+AGG | + | chr1.3:2978703-2978722 | MS.gene27242:intron | 20.0% |
| !! | ATGTGTTATATCTTTGTATA+TGG | + | chr1.3:2975751-2975770 | MS.gene27242:intron | 20.0% |
| !! | ATTAAATGATTGTAATGGTA+GGG | + | chr1.3:2978891-2978910 | MS.gene27242:intron | 20.0% |
| !! | ATTAACAAACGAAAAATATC+TGG | - | chr1.3:2978179-2978198 | None:intergenic | 20.0% |
| !! | CAAGTTTCAAATTAAAACAA+TGG | + | chr1.3:2974853-2974872 | MS.gene27242:CDS | 20.0% |
| !! | CATAAACAAGACAATATATT+AGG | - | chr1.3:2979094-2979113 | None:intergenic | 20.0% |
| !! | GTTCATATAATATTTAACCA+TGG | + | chr1.3:2979142-2979161 | MS.gene27242:intron | 20.0% |
| !! | TAAAAAAAAAGAGAGAGATT+TGG | - | chr1.3:2976189-2976208 | None:intergenic | 20.0% |
| !! | TATAAAATGCAGATTTCAAT+GGG | - | chr1.3:2976243-2976262 | None:intergenic | 20.0% |
| !! | TATATGATCCATAAAGATTT+AGG | + | chr1.3:2978230-2978249 | MS.gene27242:intron | 20.0% |
| !! | TTATAAAATGCAGATTTCAA+TGG | - | chr1.3:2976244-2976263 | None:intergenic | 20.0% |
| !! | TTATTGTATTTAGCATGTAT+TGG | + | chr1.3:2974439-2974458 | MS.gene27242:intron | 20.0% |
| !!! | AGTGATATTTTGATGTTTTT+TGG | + | chr1.3:2977172-2977191 | MS.gene27242:intron | 20.0% |
| !!! | ATTAGTTAGTATTGATCTTA+GGG | + | chr1.3:2975647-2975666 | MS.gene27242:intron | 20.0% |
| !!! | ATTTTTCGTTTGTTAATTGT+TGG | + | chr1.3:2978182-2978201 | MS.gene27242:intron | 20.0% |
| !!! | GTAATTTTCCTAAATCTTTA+TGG | - | chr1.3:2978241-2978260 | None:intergenic | 20.0% |
| !!! | GTTTTAGTTGAACATTTTTA+TGG | + | chr1.3:2973871-2973890 | MS.gene27242:intron | 20.0% |
| !!! | TATTTTGTGTAAAAGAGATA+TGG | + | chr1.3:2975469-2975488 | MS.gene27242:intron | 20.0% |
| !!! | TTGAATTAAAACCACATTTT+GGG | - | chr1.3:2978749-2978768 | None:intergenic | 20.0% |
| !!! | TTTTATAACCAAAAAACTAC+CGG | + | chr1.3:2976256-2976275 | MS.gene27242:intron | 20.0% |
| !!! | TTTTTCGTTTGTTAATTGTT+GGG | + | chr1.3:2978183-2978202 | MS.gene27242:intron | 20.0% |
| ! | AAACCTTTGATAGATCTTAT+TGG | + | chr1.3:2973604-2973623 | MS.gene27242:CDS | 25.0% |
| ! | AAATATCTATATGTGATCAC+AGG | + | chr1.3:2975410-2975429 | MS.gene27242:intron | 25.0% |
| ! | AACCTTTGATAGATCTTATT+GGG | + | chr1.3:2973605-2973624 | MS.gene27242:CDS | 25.0% |
| ! | AAGCTTTCAACTTCATAAAA+GGG | - | chr1.3:2975939-2975958 | None:intergenic | 25.0% |
| ! | AATATATGAAACTACAACTG+TGG | - | chr1.3:2979568-2979587 | None:intergenic | 25.0% |
| ! | AATATCTATATGTGATCACA+GGG | + | chr1.3:2975411-2975430 | MS.gene27242:intron | 25.0% |
| ! | AATTAATTGCAGGATTTGAA+GGG | + | chr1.3:2974356-2974375 | MS.gene27242:intron | 25.0% |
| ! | ATAACACATAAGAACTGTTA+GGG | - | chr1.3:2975740-2975759 | None:intergenic | 25.0% |
| ! | ATACAATAATGAGATTACAG+CGG | + | chr1.3:2979380-2979399 | MS.gene27242:CDS | 25.0% |
| ! | ATCACTTACAGCAAAAATAA+AGG | - | chr1.3:2977158-2977177 | None:intergenic | 25.0% |
| ! | ATTGATATGTGAGAAAATAG+AGG | + | chr1.3:2978920-2978939 | MS.gene27242:intron | 25.0% |
| ! | CAATTGTAAATGCATACAAA+AGG | + | chr1.3:2977532-2977551 | MS.gene27242:intron | 25.0% |
| ! | CAGCAATTAAATGATTGTAA+TGG | + | chr1.3:2978886-2978905 | MS.gene27242:intron | 25.0% |
| ! | CTGTAATCTCATTATTGTAT+AGG | - | chr1.3:2979380-2979399 | None:intergenic | 25.0% |
| ! | GAAAGAATAACATTCAAGAA+AGG | - | chr1.3:2977492-2977511 | None:intergenic | 25.0% |
| ! | GGTTTAATGTAATATCGTTA+TGG | - | chr1.3:2974026-2974045 | None:intergenic | 25.0% |
| ! | GTAAATAGATGTAATAGCAA+TGG | - | chr1.3:2976828-2976847 | None:intergenic | 25.0% |
| ! | GTTGTAGTTTCATATATTAC+TGG | + | chr1.3:2979570-2979589 | MS.gene27242:CDS | 25.0% |
| ! | TAAAACATATCCTAAAACCA+AGG | - | chr1.3:2977687-2977706 | None:intergenic | 25.0% |
| ! | TAAGCTTTCAACTTCATAAA+AGG | - | chr1.3:2975940-2975959 | None:intergenic | 25.0% |
| ! | TAATTAATTGCAGGATTTGA+AGG | + | chr1.3:2974355-2974374 | MS.gene27242:intron | 25.0% |
| ! | TATAACACATAAGAACTGTT+AGG | - | chr1.3:2975741-2975760 | None:intergenic | 25.0% |
| ! | TCATCAATTGAGAGAAATTT+GGG | + | chr1.3:2975689-2975708 | MS.gene27242:intron | 25.0% |
| ! | TTAAATGATTGTAATGGTAG+GGG | + | chr1.3:2978892-2978911 | MS.gene27242:intron | 25.0% |
| ! | TTCTTTCTTAATCAATAGGT+TGG | + | chr1.3:2975865-2975884 | MS.gene27242:intron | 25.0% |
| ! | TTGATATGTGAGAAAATAGA+GGG | + | chr1.3:2978921-2978940 | MS.gene27242:intron | 25.0% |
| ! | TTTCCGAATTATAAATTTGC+TGG | + | chr1.3:2977050-2977069 | MS.gene27242:intron | 25.0% |
| !! | AAGTAAGCATTTAGGTTATT+TGG | - | chr1.3:2978597-2978616 | None:intergenic | 25.0% |
| !! | AATTATGGACTTTTATCGAT+TGG | - | chr1.3:2977586-2977605 | None:intergenic | 25.0% |
| !! | AGTAAGCATTTAGGTTATTT+GGG | - | chr1.3:2978596-2978615 | None:intergenic | 25.0% |
| !! | ATCACTAGTTTAAAATGTCA+AGG | - | chr1.3:2976078-2976097 | None:intergenic | 25.0% |
| !! | CTTGAATTAAAACCACATTT+TGG | - | chr1.3:2978750-2978769 | None:intergenic | 25.0% |
| !! | TATCAATGACTTAAAAGTGT+CGG | + | chr1.3:2976103-2976122 | MS.gene27242:intron | 25.0% |
| !! | TCATATCTTTTTGGATATGA+TGG | - | chr1.3:2973791-2973810 | None:intergenic | 25.0% |
| !! | TTGTAGAATACAATGCTTTT+AGG | + | chr1.3:2976750-2976769 | MS.gene27242:intron | 25.0% |
| !!! | AATCATTTAATTGCTGTTTG+AGG | - | chr1.3:2978882-2978901 | None:intergenic | 25.0% |
| !!! | ATATTGTCTTGTTTATGCAA+TGG | + | chr1.3:2979097-2979116 | MS.gene27242:intron | 25.0% |
| !!! | ATCAAGTTCATTTTTTGTTG+AGG | + | chr1.3:2974655-2974674 | MS.gene27242:CDS | 25.0% |
| !!! | ATTGTTTTGTGGATTAATTC+AGG | + | chr1.3:2974319-2974338 | MS.gene27242:intron | 25.0% |
| !!! | GATTAGTTAGTATTGATCTT+AGG | + | chr1.3:2975646-2975665 | MS.gene27242:intron | 25.0% |
| !!! | GTTTTATAATCCTTGGTTTT+AGG | + | chr1.3:2977674-2977693 | MS.gene27242:intron | 25.0% |
| !!! | TATTGTCTTGTTTATGCAAT+GGG | + | chr1.3:2979098-2979117 | MS.gene27242:intron | 25.0% |
| !!! | TGTGTGAGTTTTGTATTTTT+TGG | + | chr1.3:2974382-2974401 | MS.gene27242:intron | 25.0% |
| !!! | TTAGTTAGTATTGATCTTAG+GGG | + | chr1.3:2975648-2975667 | MS.gene27242:intron | 25.0% |
| !!! | TTATTTGGGTTTGCTATAAA+AGG | - | chr1.3:2978582-2978601 | None:intergenic | 25.0% |
| !!! | TTCAATTACTTTTAGGGTTA+GGG | + | chr1.3:2974212-2974231 | MS.gene27242:intron | 25.0% |
| !!! | TTTCATATATTACTGGTTCT+GGG | + | chr1.3:2979577-2979596 | MS.gene27242:CDS | 25.0% |
| !!! | TTTTGGATATGATGGAAAAT+GGG | - | chr1.3:2973783-2973802 | None:intergenic | 25.0% |
| !!! | TTTTTGGATATGATGGAAAA+TGG | - | chr1.3:2973784-2973803 | None:intergenic | 25.0% |
| AAAACTAATCTGTGATGTGT+TGG | + | chr1.3:2976943-2976962 | MS.gene27242:intron | 30.0% | |
| AACTAAACTAAACTTCTGAC+CGG | + | chr1.3:2974097-2974116 | MS.gene27242:intron | 30.0% | |
| AACTTACAGTTCAGATGAAT+CGG | - | chr1.3:2975230-2975249 | None:intergenic | 30.0% | |
| AAGGCAATACCAAAATTGAA+TGG | + | chr1.3:2978722-2978741 | MS.gene27242:intron | 30.0% | |
| AAGTTGAAAGCTTAGTTGTT+GGG | + | chr1.3:2975946-2975965 | MS.gene27242:intron | 30.0% | |
| AATAGTGTGTATTTGAAGAG+TGG | + | chr1.3:2974968-2974987 | MS.gene27242:CDS | 30.0% | |
| ACAAACCAATGTTAACTTCT+TGG | + | chr1.3:2973080-2973099 | MS.gene27242:CDS | 30.0% | |
| ACAGTCAAACTACATATAAC+AGG | - | chr1.3:2975371-2975390 | None:intergenic | 30.0% | |
| ACATAAATTCTATCCTATCC+AGG | - | chr1.3:2973668-2973687 | None:intergenic | 30.0% | |
| ACCTAGGGACTTAATATAAA+AGG | + | chr1.3:2977935-2977954 | MS.gene27242:intron | 30.0% | |
| ACCTTTGATAGATCTTATTG+GGG | + | chr1.3:2973606-2973625 | MS.gene27242:CDS | 30.0% | |
| ACGGTTCTTTCTTAATCAAT+AGG | + | chr1.3:2975861-2975880 | MS.gene27242:intron | 30.0% | |
| ACTTCTAACTAGCATGAAAA+GGG | + | chr1.3:2977011-2977030 | MS.gene27242:intron | 30.0% | |
| AGAACAAAAAAGCAGATTGA+CGG | + | chr1.3:2975842-2975861 | MS.gene27242:intron | 30.0% | |
| AGCCTTGAAAAATAATTGGA+TGG | - | chr1.3:2974524-2974543 | None:intergenic | 30.0% | |
| AGGCCAGCAAATTTATAATT+CGG | - | chr1.3:2977056-2977075 | None:intergenic | 30.0% | |
| AGTATTCAGTGATTTACAGA+GGG | - | chr1.3:2978443-2978462 | None:intergenic | 30.0% | |
| AGTGATTTATCCAACAACTA+AGG | - | chr1.3:2978332-2978351 | None:intergenic | 30.0% | |
| ATGCATACAAAAGGATATGA+TGG | + | chr1.3:2977541-2977560 | MS.gene27242:intron | 30.0% | |
| ATGCATTTACAATTGCACAA+AGG | - | chr1.3:2977527-2977546 | None:intergenic | 30.0% | |
| ATGCTAGTTAGAAGTCAAAA+GGG | - | chr1.3:2977006-2977025 | None:intergenic | 30.0% | |
| ATTAATTGCAGGATTTGAAG+GGG | + | chr1.3:2974357-2974376 | MS.gene27242:intron | 30.0% | |
| ATTATAATGGCAAACATGAG+AGG | - | chr1.3:2975258-2975277 | None:intergenic | 30.0% | |
| CACAGTGACTAAATATATTC+TGG | + | chr1.3:2976287-2976306 | MS.gene27242:intron | 30.0% | |
| CAGTCACAAATAATCTGTAA+GGG | - | chr1.3:2976909-2976928 | None:intergenic | 30.0% | |
| CATCAATTGAGAGAAATTTG+GGG | + | chr1.3:2975690-2975709 | MS.gene27242:intron | 30.0% | |
| CTCATCAATTGAGAGAAATT+TGG | + | chr1.3:2975688-2975707 | MS.gene27242:intron | 30.0% | |
| CTTAATATAAAAGGTGAGCA+AGG | + | chr1.3:2977944-2977963 | MS.gene27242:intron | 30.0% | |
| CTTACAGCAAAAATAAAGGT+AGG | - | chr1.3:2977154-2977173 | None:intergenic | 30.0% | |
| CTTCTTACATATACCAGATT+TGG | + | chr1.3:2973157-2973176 | MS.gene27242:CDS | 30.0% | |
| GTGATTTATCCAACAACTAA+GGG | - | chr1.3:2978331-2978350 | None:intergenic | 30.0% | |
| GTTATATGTAGTTTGACTGT+TGG | + | chr1.3:2975371-2975390 | MS.gene27242:intron | 30.0% | |
| TACTAACTAATCCTGAACAT+AGG | - | chr1.3:2975638-2975657 | None:intergenic | 30.0% | |
| TAGAACACTTCAATAACACA+AGG | - | chr1.3:2976011-2976030 | None:intergenic | 30.0% | |
| TCAGTCACAAATAATCTGTA+AGG | - | chr1.3:2976910-2976929 | None:intergenic | 30.0% | |
| TCGATTGGAAAGTGATATAA+AGG | - | chr1.3:2977571-2977590 | None:intergenic | 30.0% | |
| TCTTCCCTGTTCTATTATAA+TGG | + | chr1.3:2973821-2973840 | MS.gene27242:intron | 30.0% | |
| TCTTTAGCAAATAGACTACT+CGG | - | chr1.3:2975980-2975999 | None:intergenic | 30.0% | |
| TGATACAGATTGTAAACCTA+GGG | + | chr1.3:2977920-2977939 | MS.gene27242:intron | 30.0% | |
| TGATATGTGAGAAAATAGAG+GGG | + | chr1.3:2978922-2978941 | MS.gene27242:intron | 30.0% | |
| TGCATTTACAATTGCACAAA+GGG | - | chr1.3:2977526-2977545 | None:intergenic | 30.0% | |
| TGGATAGGATAGAATTTATG+TGG | + | chr1.3:2973667-2973686 | MS.gene27242:CDS | 30.0% | |
| TGGGTTCTATTGTTTATATC+AGG | + | chr1.3:2979290-2979309 | MS.gene27242:intron | 30.0% | |
| TGTAAAACCACTCTTCAAAA+TGG | + | chr1.3:2975789-2975808 | MS.gene27242:intron | 30.0% | |
| TTATAATGGCAAACATGAGA+GGG | - | chr1.3:2975257-2975276 | None:intergenic | 30.0% | |
| TTCATGTTCAGGTGATTAAA+TGG | - | chr1.3:2978415-2978434 | None:intergenic | 30.0% | |
| TTGATACAGATTGTAAACCT+AGG | + | chr1.3:2977919-2977938 | MS.gene27242:intron | 30.0% | |
| TTTCAATTTCACCTATCAGT+TGG | + | chr1.3:2977414-2977433 | MS.gene27242:CDS | 30.0% | |
| ! | ACCTTTTATATTAAGTCCCT+AGG | - | chr1.3:2977939-2977958 | None:intergenic | 30.0% |
| ! | AGAGATTTGGGTGAAATTTT+TGG | - | chr1.3:2976176-2976195 | None:intergenic | 30.0% |
| ! | AGATGAGGTTAGTGTATTTT+GGG | - | chr1.3:2972885-2972904 | None:intergenic | 30.0% |
| ! | ATCAAGTTTTCTCATATGGA+GGG | - | chr1.3:2976039-2976058 | None:intergenic | 30.0% |
| ! | TGCTCATTTTATATGTTCTG+AGG | + | chr1.3:2976447-2976466 | MS.gene27242:CDS | 30.0% |
| ! | TTAGTTCTTTCATGCTTGTA+GGG | + | chr1.3:2979259-2979278 | MS.gene27242:intron | 30.0% |
| ! | TTTCTTAATCAATAGGTTGG+AGG | + | chr1.3:2975868-2975887 | MS.gene27242:intron | 30.0% |
| ! | TTTTCAGAATAAGCACATAC+CGG | + | chr1.3:2973200-2973219 | MS.gene27242:CDS | 30.0% |
| !! | AAGAGTGGTTTTACAATGAT+AGG | - | chr1.3:2975784-2975803 | None:intergenic | 30.0% |
| !! | AATTATAAATTTGCTGGCCT+TGG | + | chr1.3:2977056-2977075 | MS.gene27242:intron | 30.0% |
| !! | ATCTGTTTTGAATTATCCGA+TGG | + | chr1.3:2976862-2976881 | MS.gene27242:intron | 30.0% |
| !! | ATTGGTTTGTTCAAAGTTGA+GGG | - | chr1.3:2973070-2973089 | None:intergenic | 30.0% |
| !! | ATTGTCTTGTTTATGCAATG+GGG | + | chr1.3:2979099-2979118 | MS.gene27242:intron | 30.0% |
| !! | ATTTTGGGTCCATTCAATTT+TGG | - | chr1.3:2978734-2978753 | None:intergenic | 30.0% |
| !! | GTTTCATATATTACTGGTTC+TGG | + | chr1.3:2979576-2979595 | MS.gene27242:CDS | 30.0% |
| !! | TAGTTAGTATTGATCTTAGG+GGG | + | chr1.3:2975649-2975668 | MS.gene27242:intron | 30.0% |
| !! | TATATTTTAGGCACTTTCAG+AGG | - | chr1.3:2977639-2977658 | None:intergenic | 30.0% |
| !! | TATTTAGCATGTATTGGTTC+TGG | + | chr1.3:2974445-2974464 | MS.gene27242:intron | 30.0% |
| !! | TCGATTTTAGGGAAAAAAAG+TGG | + | chr1.3:2974548-2974567 | MS.gene27242:CDS | 30.0% |
| !! | TGCCATCCAATTATTTTTCA+AGG | + | chr1.3:2974519-2974538 | MS.gene27242:intron | 30.0% |
| !! | TTCATATATTACTGGTTCTG+GGG | + | chr1.3:2979578-2979597 | MS.gene27242:CDS | 30.0% |
| !! | TTTAGTTCTTTCATGCTTGT+AGG | + | chr1.3:2979258-2979277 | MS.gene27242:intron | 30.0% |
| !!! | AACATGGAGATTTTGACTTA+AGG | + | chr1.3:2975446-2975465 | MS.gene27242:intron | 30.0% |
| !!! | ATTTTTTGCGCTCTTTTCAT+AGG | + | chr1.3:2977303-2977322 | MS.gene27242:intron | 30.0% |
| !!! | CTTCAATTACTTTTAGGGTT+AGG | + | chr1.3:2974211-2974230 | MS.gene27242:intron | 30.0% |
| !!! | GATGTTTTTTGGTGTATAGT+TGG | + | chr1.3:2977183-2977202 | MS.gene27242:intron | 30.0% |
| !!! | TCCAATTATTTTTCAAGGCT+CGG | + | chr1.3:2974524-2974543 | MS.gene27242:intron | 30.0% |
| !!! | TTGTGATAGTGTTTTTTGTG+TGG | + | chr1.3:2979179-2979198 | MS.gene27242:intron | 30.0% |
| !!! | TTTTTTGCGCTCTTTTCATA+GGG | + | chr1.3:2977304-2977323 | MS.gene27242:intron | 30.0% |
| AAACGCAACTCATAAAGATG+TGG | - | chr1.3:2973014-2973033 | None:intergenic | 35.0% | |
| AAAGGGGAGAATCTTACAAT+TGG | - | chr1.3:2974260-2974279 | None:intergenic | 35.0% | |
| AACTAATCCTGAACATAGGA+AGG | - | chr1.3:2975634-2975653 | None:intergenic | 35.0% | |
| AAGGGGAGAATCTTACAATT+GGG | - | chr1.3:2974259-2974278 | None:intergenic | 35.0% | |
| AATAAAGGTGACACATCCAA+GGG | - | chr1.3:2977743-2977762 | None:intergenic | 35.0% | |
| AATCCCATCTTTGCATAGAA+AGG | + | chr1.3:2975500-2975519 | MS.gene27242:intron | 35.0% | |
| AATTATATTGACCTCCCTTG+AGG | - | chr1.3:2978970-2978989 | None:intergenic | 35.0% | |
| AATTCAGCTTGATTGAATGG+TGG | + | chr1.3:2978093-2978112 | MS.gene27242:intron | 35.0% | |
| AATTGAATGGACCCAAAATG+TGG | + | chr1.3:2978735-2978754 | MS.gene27242:intron | 35.0% | |
| ACATCTTTATGAGTTGCGTT+TGG | + | chr1.3:2973013-2973032 | MS.gene27242:CDS | 35.0% | |
| ACTAATCCTGAACATAGGAA+GGG | - | chr1.3:2975633-2975652 | None:intergenic | 35.0% | |
| ACTACTACATTCCAACTGAT+AGG | - | chr1.3:2977428-2977447 | None:intergenic | 35.0% | |
| ACTGAACATTTGCATTTGAC+TGG | + | chr1.3:2975577-2975596 | MS.gene27242:intron | 35.0% | |
| AGAAATCACCAAATGACCAT+CGG | - | chr1.3:2976881-2976900 | None:intergenic | 35.0% | |
| AGGGAAAAAAAGTGGAATTC+AGG | + | chr1.3:2974556-2974575 | MS.gene27242:CDS | 35.0% | |
| AGTGTATAAGTCAGTAGAGT+GGG | + | chr1.3:2977987-2978006 | MS.gene27242:intron | 35.0% | |
| ATAAATACCTGACCAGAACT+AGG | - | chr1.3:2977463-2977482 | None:intergenic | 35.0% | |
| ATAAGGGTGAGAGAGAAATT+AGG | - | chr1.3:2974188-2974207 | None:intergenic | 35.0% | |
| ATACTCAAGCACAAAAGCTA+AGG | + | chr1.3:2976624-2976643 | MS.gene27242:CDS | 35.0% | |
| ATCTGGAGAATTCAGCATAA+TGG | + | chr1.3:2972901-2972920 | MS.gene27242:CDS | 35.0% | |
| ATGATCCTTAACGAAGTGAA+GGG | - | chr1.3:2973523-2973542 | None:intergenic | 35.0% | |
| ATGTAAGAGGAAACATGCAA+AGG | - | chr1.3:2977801-2977820 | None:intergenic | 35.0% | |
| ATTACGTTTACACATACCTC+GGG | - | chr1.3:2978272-2978291 | None:intergenic | 35.0% | |
| ATTCTTGCAATACTCCAAAG+AGG | - | chr1.3:2976710-2976729 | None:intergenic | 35.0% | |
| ATTTATCCAACAACTAAGGG+AGG | - | chr1.3:2978328-2978347 | None:intergenic | 35.0% | |
| CAAAATACACTAACCTCATC+TGG | + | chr1.3:2972884-2972903 | MS.gene27242:CDS | 35.0% | |
| CAATTCAGTAGATGCTATTC+GGG | + | chr1.3:2976555-2976574 | MS.gene27242:CDS | 35.0% | |
| CAGAATTCAGCTTGATTGAA+TGG | + | chr1.3:2978090-2978109 | MS.gene27242:intron | 35.0% | |
| CATAGTGATTTACCTAGTTC+TGG | + | chr1.3:2977448-2977467 | MS.gene27242:CDS | 35.0% | |
| CATCCTGATAAAGAAGAAAC+TGG | + | chr1.3:2976415-2976434 | MS.gene27242:CDS | 35.0% | |
| CATGCTAGTTAGAAGTCAAA+AGG | - | chr1.3:2977007-2977026 | None:intergenic | 35.0% | |
| CCAAAAATTGCACCATTATC+TGG | - | chr1.3:2975043-2975062 | None:intergenic | 35.0% | |
| CCAATTCAGTAGATGCTATT+CGG | + | chr1.3:2976554-2976573 | MS.gene27242:CDS | 35.0% | |
| CCAGAATGAAGACAAAAGTT+GGG | + | chr1.3:2972834-2972853 | MS.gene27242:CDS | 35.0% | |
| CTCCATATGAGAAAACTTGA+TGG | + | chr1.3:2976038-2976057 | MS.gene27242:intron | 35.0% | |
| CTTATACTTTGACAAGTCCA+AGG | - | chr1.3:2977076-2977095 | None:intergenic | 35.0% | |
| CTTCCTTTGAATCAAAACAC+CGG | - | chr1.3:2972984-2973003 | None:intergenic | 35.0% | |
| CTTCGTTAAGGATCATGATT+TGG | + | chr1.3:2973527-2973546 | MS.gene27242:CDS | 35.0% | |
| GAAGTTGAAAGCTTAGTTGT+TGG | + | chr1.3:2975945-2975964 | MS.gene27242:intron | 35.0% | |
| GACTTCTAACTAGCATGAAA+AGG | + | chr1.3:2977010-2977029 | MS.gene27242:intron | 35.0% | |
| GAGTATTCAGTGATTTACAG+AGG | - | chr1.3:2978444-2978463 | None:intergenic | 35.0% | |
| GATATGTGAGAAAATAGAGG+GGG | + | chr1.3:2978923-2978942 | MS.gene27242:intron | 35.0% | |
| GATCCTTTCTATGCAAAGAT+GGG | - | chr1.3:2975506-2975525 | None:intergenic | 35.0% | |
| GATTACGTTTACACATACCT+CGG | - | chr1.3:2978273-2978292 | None:intergenic | 35.0% | |
| GCATGAAAGAACTAAATGCA+TGG | - | chr1.3:2979254-2979273 | None:intergenic | 35.0% | |
| GCATTTACAATTGCACAAAG+GGG | - | chr1.3:2977525-2977544 | None:intergenic | 35.0% | |
| GGAATCTCGAAATTTCTATG+AGG | - | chr1.3:2974047-2974066 | None:intergenic | 35.0% | |
| GGGCTTCATGCTATTAATTT+GGG | + | chr1.3:2977325-2977344 | MS.gene27242:CDS | 35.0% | |
| GTGATGAGTAAGCAAATAGA+GGG | - | chr1.3:2978302-2978321 | None:intergenic | 35.0% | |
| GTGTATTTGAAGAGTGGTTT+GGG | + | chr1.3:2974974-2974993 | MS.gene27242:CDS | 35.0% | |
| GTTTCTTCTTTATCAGGATG+AGG | - | chr1.3:2976415-2976434 | None:intergenic | 35.0% | |
| TAACTACAAACCTGAATCGA+CGG | - | chr1.3:2974803-2974822 | None:intergenic | 35.0% | |
| TAAGGGTGAGAGAGAAATTA+GGG | - | chr1.3:2974187-2974206 | None:intergenic | 35.0% | |
| TACTCAAGCACAAAAGCTAA+GGG | + | chr1.3:2976625-2976644 | MS.gene27242:CDS | 35.0% | |
| TAGTGTATAAGTCAGTAGAG+TGG | + | chr1.3:2977986-2978005 | MS.gene27242:intron | 35.0% | |
| TATGAGACCAAAACCTATCA+GGG | - | chr1.3:2973749-2973768 | None:intergenic | 35.0% | |
| TCCCCAATAAGATCTATCAA+AGG | - | chr1.3:2973610-2973629 | None:intergenic | 35.0% | |
| TCCGAGCCTTGAAAAATAAT+TGG | - | chr1.3:2974528-2974547 | None:intergenic | 35.0% | |
| TCGGAGCTAAAATATGTAAG+AGG | - | chr1.3:2977814-2977833 | None:intergenic | 35.0% | |
| TCTGTAATGCTGCAAAGAAT+TGG | + | chr1.3:2975071-2975090 | MS.gene27242:CDS | 35.0% | |
| TGAATTATCCGATGGTCATT+TGG | + | chr1.3:2976870-2976889 | MS.gene27242:intron | 35.0% | |
| TGATAGATCTTATTGGGGAA+AGG | + | chr1.3:2973611-2973630 | MS.gene27242:CDS | 35.0% | |
| TGATCCTTTCTATGCAAAGA+TGG | - | chr1.3:2975507-2975526 | None:intergenic | 35.0% | |
| TGATGAGTAAGCAAATAGAG+GGG | - | chr1.3:2978301-2978320 | None:intergenic | 35.0% | |
| TGTATTTGAAGAGTGGTTTG+GGG | + | chr1.3:2974975-2974994 | MS.gene27242:CDS | 35.0% | |
| TGTCAGAACACTACAAACTA+AGG | - | chr1.3:2978999-2979018 | None:intergenic | 35.0% | |
| TGTGATGAGTAAGCAAATAG+AGG | - | chr1.3:2978303-2978322 | None:intergenic | 35.0% | |
| TGTGTATTTGAAGAGTGGTT+TGG | + | chr1.3:2974973-2974992 | MS.gene27242:CDS | 35.0% | |
| TGTTATGATGTGACTGAATC+TGG | + | chr1.3:2976328-2976347 | MS.gene27242:intron | 35.0% | |
| TTCCTTTGAATCAAAACACC+GGG | - | chr1.3:2972983-2973002 | None:intergenic | 35.0% | |
| TTTAACCATGGCAATTAGTC+AGG | + | chr1.3:2979154-2979173 | MS.gene27242:intron | 35.0% | |
| TTTATGTGGACAAAACGTAG+TGG | + | chr1.3:2973681-2973700 | MS.gene27242:CDS | 35.0% | |
| ! | AATTCTTTTGCTTCTCCTCA+CGG | - | chr1.3:2975204-2975223 | None:intergenic | 35.0% |
| ! | AGCCATCAAGTTTTCTCATA+TGG | - | chr1.3:2976043-2976062 | None:intergenic | 35.0% |
| ! | AGGGTACTTTAAACAGAACA+TGG | + | chr1.3:2975430-2975449 | MS.gene27242:intron | 35.0% |
| ! | ATAGTTGGCTTATCAGGAAT+CGG | + | chr1.3:2977198-2977217 | MS.gene27242:intron | 35.0% |
| ! | ATATGATGGAAAATGGGCTT+AGG | - | chr1.3:2973777-2973796 | None:intergenic | 35.0% |
| ! | CAGATGAGGTTAGTGTATTT+TGG | - | chr1.3:2972886-2972905 | None:intergenic | 35.0% |
| ! | CATCAAGTTTTCTCATATGG+AGG | - | chr1.3:2976040-2976059 | None:intergenic | 35.0% |
| ! | GATGAGGTTAGTGTATTTTG+GGG | - | chr1.3:2972884-2972903 | None:intergenic | 35.0% |
| ! | GGGAGGTCAATATAATTTTG+AGG | + | chr1.3:2978973-2978992 | MS.gene27242:intron | 35.0% |
| ! | GTTCAAGGACATTGTACTTT+TGG | - | chr1.3:2977127-2977146 | None:intergenic | 35.0% |
| ! | TATGATGGAAAATGGGCTTA+GGG | - | chr1.3:2973776-2973795 | None:intergenic | 35.0% |
| ! | TTTTTGCGCTCTTTTCATAG+GGG | + | chr1.3:2977305-2977324 | MS.gene27242:intron | 35.0% |
| !! | ACTCTACTGACTTATACACT+AGG | - | chr1.3:2977987-2978006 | None:intergenic | 35.0% |
| !! | AGTTGTTCCATTTTGAAGAG+TGG | - | chr1.3:2975799-2975818 | None:intergenic | 35.0% |
| !! | ATGAGGTTAGTGTATTTTGG+GGG | - | chr1.3:2972883-2972902 | None:intergenic | 35.0% |
| !! | CATTGGTTTGTTCAAAGTTG+AGG | - | chr1.3:2973071-2973090 | None:intergenic | 35.0% |
| !! | CCAGATAATGGTGCAATTTT+TGG | + | chr1.3:2975040-2975059 | MS.gene27242:CDS | 35.0% |
| !! | CTCTACTGACTTATACACTA+GGG | - | chr1.3:2977986-2978005 | None:intergenic | 35.0% |
| !! | CTTCTTTTAGCTACAAACTC+TGG | - | chr1.3:2974722-2974741 | None:intergenic | 35.0% |
| !! | GAAATTAGGGTTTGAGTTGT+AGG | - | chr1.3:2974174-2974193 | None:intergenic | 35.0% |
| !! | TATCGTTTTAAGTGGTAACC+TGG | + | chr1.3:2973647-2973666 | MS.gene27242:CDS | 35.0% |
| !! | TTAATTGCTGTTTGAGGTAC+AGG | - | chr1.3:2978876-2978895 | None:intergenic | 35.0% |
| !! | TTTTAAGTGGTAACCTGGAT+AGG | + | chr1.3:2973652-2973671 | MS.gene27242:CDS | 35.0% |
| !!! | CATATTTTAGCTCCGATTAC+AGG | + | chr1.3:2977818-2977837 | MS.gene27242:intron | 35.0% |
| !!! | TATAGTCTCCGGTAGTTTTT+TGG | - | chr1.3:2976267-2976286 | None:intergenic | 35.0% |
| AATGATTGTAATGGTAGGGG+AGG | + | chr1.3:2978895-2978914 | MS.gene27242:intron | 40.0% | |
| ACATTGATCGTGTCCTTTCT+GGG | + | chr1.3:2974825-2974844 | MS.gene27242:CDS | 40.0% | |
| AGAGGATGGCATAAAGATGA+AGG | - | chr1.3:2976692-2976711 | None:intergenic | 40.0% | |
| AGCTTTGCAATTTAGTCCCT+TGG | + | chr1.3:2977724-2977743 | MS.gene27242:intron | 40.0% | |
| AGGGGAGAATCTTACAATTG+GGG | - | chr1.3:2974258-2974277 | None:intergenic | 40.0% | |
| ATAAAGGTAGGTCGAGTTCA+AGG | - | chr1.3:2977142-2977161 | None:intergenic | 40.0% | |
| ATCTTACAATTGGGGGGAAA+TGG | - | chr1.3:2974250-2974269 | None:intergenic | 40.0% | |
| ATGCATGTACGCAGATACTA+TGG | - | chr1.3:2976143-2976162 | None:intergenic | 40.0% | |
| ATTGCAGGAAAACTCCTTCT+GGG | + | chr1.3:2976353-2976372 | MS.gene27242:intron | 40.0% | |
| CAAAACCTGACTAATTGCCA+TGG | - | chr1.3:2979162-2979181 | None:intergenic | 40.0% | |
| CAATAATGAGATTACAGCGG+TGG | + | chr1.3:2979383-2979402 | MS.gene27242:CDS | 40.0% | |
| CACAGGTGAACAGGAAATTA+TGG | - | chr1.3:2977601-2977620 | None:intergenic | 40.0% | |
| CACTTAAAACGATACAAGCG+TGG | - | chr1.3:2973641-2973660 | None:intergenic | 40.0% | |
| CATCATTGCTCTTACTGATC+AGG | + | chr1.3:2976663-2976682 | MS.gene27242:CDS | 40.0% | |
| CATCCAGCTTATTAGATGTC+TGG | + | chr1.3:2979226-2979245 | MS.gene27242:intron | 40.0% | |
| CATCTTTATGCCATCCTCTT+TGG | + | chr1.3:2976693-2976712 | MS.gene27242:intron | 40.0% | |
| CATGATCCTTAACGAAGTGA+AGG | - | chr1.3:2973524-2973543 | None:intergenic | 40.0% | |
| CATTATACACAGTCAGGGTA+TGG | + | chr1.3:2975106-2975125 | MS.gene27242:CDS | 40.0% | |
| CCAAAAGCAGAGTCATAAGA+GGG | - | chr1.3:2978466-2978485 | None:intergenic | 40.0% | |
| CCAAATATTCACAGGTGAAC+AGG | - | chr1.3:2977610-2977629 | None:intergenic | 40.0% | |
| CCAATGTTAACTTCTTGGAC+TGG | + | chr1.3:2973085-2973104 | MS.gene27242:CDS | 40.0% | |
| CCACCAGTTTCTTCTTTATC+AGG | - | chr1.3:2976421-2976440 | None:intergenic | 40.0% | |
| CCAGTCCAAGAAGTTAACAT+TGG | - | chr1.3:2973088-2973107 | None:intergenic | 40.0% | |
| CCGAATAGCATCTACTGAAT+TGG | - | chr1.3:2976557-2976576 | None:intergenic | 40.0% | |
| CCTGATAAAGAAGAAACTGG+TGG | + | chr1.3:2976418-2976437 | MS.gene27242:CDS | 40.0% | |
| CCTGTTCACCTGTGAATATT+TGG | + | chr1.3:2977607-2977626 | MS.gene27242:intron | 40.0% | |
| CGTATTTGCATCAACCTCAA+GGG | + | chr1.3:2978953-2978972 | MS.gene27242:intron | 40.0% | |
| CTACAGATCTCACCTGTAAT+CGG | - | chr1.3:2977833-2977852 | None:intergenic | 40.0% | |
| CTAGGATGGATGAATGGTAA+CGG | - | chr1.3:2978144-2978163 | None:intergenic | 40.0% | |
| CTATGAGACCAAAACCTATC+AGG | - | chr1.3:2973750-2973769 | None:intergenic | 40.0% | |
| CTGAGATTCTGATTGGACAA+GGG | + | chr1.3:2974585-2974604 | MS.gene27242:CDS | 40.0% | |
| CTTGGCATTATACACAGTCA+GGG | + | chr1.3:2975101-2975120 | MS.gene27242:CDS | 40.0% | |
| GAACCAGACATCTAATAAGC+TGG | - | chr1.3:2979232-2979251 | None:intergenic | 40.0% | |
| GAATAAAGGTGACACATCCA+AGG | - | chr1.3:2977744-2977763 | None:intergenic | 40.0% | |
| GATGCTGGATTTCGTTACTA+TGG | + | chr1.3:2979525-2979544 | MS.gene27242:CDS | 40.0% | |
| GATTAACCCTTCCTATGTTC+AGG | + | chr1.3:2975624-2975643 | MS.gene27242:intron | 40.0% | |
| GATTACGCGAATACCAAATC+TGG | - | chr1.3:2973173-2973192 | None:intergenic | 40.0% | |
| GATTCTGCTGAGATTCTGAT+TGG | + | chr1.3:2974578-2974597 | MS.gene27242:CDS | 40.0% | |
| GCCAGAATGAAGACAAAAGT+TGG | + | chr1.3:2972833-2972852 | MS.gene27242:CDS | 40.0% | |
| GCTACTAAGATTGTTAGGAG+TGG | + | chr1.3:2973456-2973475 | MS.gene27242:CDS | 40.0% | |
| GGGGCTTCATGCTATTAATT+TGG | + | chr1.3:2977324-2977343 | MS.gene27242:intron | 40.0% | |
| GTGTATAAGTCAGTAGAGTG+GGG | + | chr1.3:2977988-2978007 | MS.gene27242:intron | 40.0% | |
| TAATTATTGTACTGCGCGTG+AGG | + | chr1.3:2978784-2978803 | MS.gene27242:intron | 40.0% | |
| TAGTCACTGTGTATAGTCTC+CGG | - | chr1.3:2976278-2976297 | None:intergenic | 40.0% | |
| TATGCTGAATTCTCCAGATG+AGG | - | chr1.3:2972900-2972919 | None:intergenic | 40.0% | |
| TCATCCATCCTAGTGTCAAT+GGG | + | chr1.3:2978151-2978170 | MS.gene27242:intron | 40.0% | |
| TCCTTTGAATCAAAACACCG+GGG | - | chr1.3:2972982-2973001 | None:intergenic | 40.0% | |
| TCGTATTTGCATCAACCTCA+AGG | + | chr1.3:2978952-2978971 | MS.gene27242:intron | 40.0% | |
| TCTTGGCATTATACACAGTC+AGG | + | chr1.3:2975100-2975119 | MS.gene27242:CDS | 40.0% | |
| TGATTGGACAAGGGAAATTG+TGG | + | chr1.3:2974594-2974613 | MS.gene27242:CDS | 40.0% | |
| TGCATGTACGCAGATACTAT+GGG | - | chr1.3:2976142-2976161 | None:intergenic | 40.0% | |
| TGCTGCTGCCAGAATAAAAT+AGG | + | chr1.3:2978056-2978075 | MS.gene27242:intron | 40.0% | |
| TGGTGGCTACTAAGATTGTT+AGG | + | chr1.3:2973451-2973470 | MS.gene27242:CDS | 40.0% | |
| TTCAGGTGATTAAATGGCAG+AGG | - | chr1.3:2978409-2978428 | None:intergenic | 40.0% | |
| TTCATCCATCCTAGTGTCAA+TGG | + | chr1.3:2978150-2978169 | MS.gene27242:intron | 40.0% | |
| TTCTACTGATCACGATACCA+TGG | + | chr1.3:2973125-2973144 | MS.gene27242:CDS | 40.0% | |
| TTGAAATCATGTTGCTGCAC+TGG | - | chr1.3:2977400-2977419 | None:intergenic | 40.0% | |
| TTGACACTAGGATGGATGAA+TGG | - | chr1.3:2978150-2978169 | None:intergenic | 40.0% | |
| TTGCAATACTCCAAAGAGGA+TGG | - | chr1.3:2976706-2976725 | None:intergenic | 40.0% | |
| TTGGTATTCGCGTAATCAAC+TGG | + | chr1.3:2973176-2973195 | MS.gene27242:CDS | 40.0% | |
| TTGTTCAAAGTTGAGGGTGA+GGG | - | chr1.3:2973064-2973083 | None:intergenic | 40.0% | |
| TTTAGCTACAAACTCTGGAC+TGG | - | chr1.3:2974717-2974736 | None:intergenic | 40.0% | |
| TTTGTTCAAAGTTGAGGGTG+AGG | - | chr1.3:2973065-2973084 | None:intergenic | 40.0% | |
| ! | AAACTCTGGACTGGAATCTA+AGG | - | chr1.3:2974708-2974727 | None:intergenic | 40.0% |
| ! | AAGCTGTTGGTTGTGGTTAT+AGG | + | chr1.3:2974125-2974144 | MS.gene27242:intron | 40.0% |
| ! | ATTCTTTTGCTTCTCCTCAC+GGG | - | chr1.3:2975203-2975222 | None:intergenic | 40.0% |
| ! | CAAAGAATTGGCTCAGTTCT+TGG | + | chr1.3:2975083-2975102 | MS.gene27242:CDS | 40.0% |
| ! | CCCAACTTTTGTCTTCATTC+TGG | - | chr1.3:2972837-2972856 | None:intergenic | 40.0% |
| ! | CTATTAATTTGGGAGACAGC+GGG | + | chr1.3:2977335-2977354 | MS.gene27242:CDS | 40.0% |
| ! | GACAAAACGTAGTGGAAATC+AGG | + | chr1.3:2973689-2973708 | MS.gene27242:CDS | 40.0% |
| ! | GCTATTAATTTGGGAGACAG+CGG | + | chr1.3:2977334-2977353 | MS.gene27242:CDS | 40.0% |
| ! | GGCTAGTTCCAAATATTCAC+AGG | - | chr1.3:2977618-2977637 | None:intergenic | 40.0% |
| ! | TGGTGTATAGTTGGCTTATC+AGG | + | chr1.3:2977192-2977211 | MS.gene27242:intron | 40.0% |
| !! | ATTAGGGTTTGAGTTGTAGG+CGG | - | chr1.3:2974171-2974190 | None:intergenic | 40.0% |
| !! | CACGCTTGTATCGTTTTAAG+TGG | + | chr1.3:2973639-2973658 | MS.gene27242:CDS | 40.0% |
| !! | GAGAGAAATTTGGGGCTTTT+GGG | + | chr1.3:2975698-2975717 | MS.gene27242:intron | 40.0% |
| !! | GGTTTTGTATTCGTGAAGGA+AGG | - | chr1.3:2973253-2973272 | None:intergenic | 40.0% |
| !! | TGAGAGAAATTTGGGGCTTT+TGG | + | chr1.3:2975697-2975716 | MS.gene27242:intron | 40.0% |
| !! | TGATTTACCTAGTTCTGGTC+AGG | + | chr1.3:2977453-2977472 | MS.gene27242:CDS | 40.0% |
| !! | TGTGGGTTTTGTATTCGTGA+AGG | - | chr1.3:2973257-2973276 | None:intergenic | 40.0% |
| !!! | AGTGTTTTTTGTGTGGTGAC+TGG | + | chr1.3:2979186-2979205 | MS.gene27242:intron | 40.0% |
| !!! | GCATTTGACTGGTGCTATTT+TGG | + | chr1.3:2975588-2975607 | MS.gene27242:intron | 40.0% |
| !!! | GGGAGTTTTAAGCTTCCAAA+GGG | - | chr1.3:2972863-2972882 | None:intergenic | 40.0% |
| AAAACCCTGAAGCTGGTATC+TGG | + | chr1.3:2976376-2976395 | MS.gene27242:CDS | 45.0% | |
| AACAACCATCCCAGGTAAAC+GGG | - | chr1.3:2974882-2974901 | None:intergenic | 45.0% | |
| AAGGCAAACCTCTTTCAACG+AGG | + | chr1.3:2972934-2972953 | MS.gene27242:CDS | 45.0% | |
| ACAAAAGTTGGGACTCCCTT+TGG | + | chr1.3:2972845-2972864 | MS.gene27242:CDS | 45.0% | |
| AGAAGCCCTTCACTTCGTTA+AGG | + | chr1.3:2973515-2973534 | MS.gene27242:CDS | 45.0% | |
| AGAGGGAGAGTTTCATGTTC+AGG | - | chr1.3:2978426-2978445 | None:intergenic | 45.0% | |
| AGCTCAGAAGATAGCTGCAT+TGG | + | chr1.3:2979446-2979465 | MS.gene27242:CDS | 45.0% | |
| AGCTCATGAGATAGCTCGTT+GGG | + | chr1.3:2973713-2973732 | MS.gene27242:CDS | 45.0% | |
| ATGATCCAGATACCAGCTTC+AGG | - | chr1.3:2976384-2976403 | None:intergenic | 45.0% | |
| ATTTGCATCAACCTCAAGGG+AGG | + | chr1.3:2978956-2978975 | MS.gene27242:intron | 45.0% | |
| CAAAACACCGGGGACATAAA+GGG | - | chr1.3:2972972-2972991 | None:intergenic | 45.0% | |
| CAACAACCATCCCAGGTAAA+CGG | - | chr1.3:2974883-2974902 | None:intergenic | 45.0% | |
| CACAAACCTCCCTTAGTTGT+TGG | + | chr1.3:2978319-2978338 | MS.gene27242:intron | 45.0% | |
| CACATTGATCGTGTCCTTTC+TGG | + | chr1.3:2974824-2974843 | MS.gene27242:CDS | 45.0% | |
| CAGTTGTTGATACGCTGTCT+AGG | + | chr1.3:2974750-2974769 | MS.gene27242:CDS | 45.0% | |
| CATTGATCGTGTCCTTTCTG+GGG | + | chr1.3:2974826-2974845 | MS.gene27242:CDS | 45.0% | |
| CGATGTCATAGTTGCTGGTA+CGG | + | chr1.3:2979338-2979357 | MS.gene27242:CDS | 45.0% | |
| CGATTACAGGTGAGATCTGT+AGG | + | chr1.3:2977831-2977850 | MS.gene27242:intron | 45.0% | |
| GAATAAGCACATACCGGTGA+TGG | + | chr1.3:2973206-2973225 | MS.gene27242:CDS | 45.0% | |
| GATTGCAGGAAAACTCCTTC+TGG | + | chr1.3:2976352-2976371 | MS.gene27242:intron | 45.0% | |
| GCCAAAAGCAGAGTCATAAG+AGG | - | chr1.3:2978467-2978486 | None:intergenic | 45.0% | |
| GCTGAGATTCTGATTGGACA+AGG | + | chr1.3:2974584-2974603 | MS.gene27242:CDS | 45.0% | |
| GCTGGATTTCGTTACTATGG+CGG | + | chr1.3:2979528-2979547 | MS.gene27242:CDS | 45.0% | |
| GGAATATGGTGCAACCATCA+CGG | - | chr1.3:2977372-2977391 | None:intergenic | 45.0% | |
| GGACAAGGGAAATTGTGGTT+TGG | + | chr1.3:2974599-2974618 | MS.gene27242:CDS | 45.0% | |
| GGGAGAATCTTACAATTGGG+GGG | - | chr1.3:2974256-2974275 | None:intergenic | 45.0% | |
| GGGGAGAATCTTACAATTGG+GGG | - | chr1.3:2974257-2974276 | None:intergenic | 45.0% | |
| GGGTTTATGGTTATCCGTGA+TGG | + | chr1.3:2977355-2977374 | MS.gene27242:CDS | 45.0% | |
| GTAAGAAGCGATCAATGCCA+TGG | - | chr1.3:2973145-2973164 | None:intergenic | 45.0% | |
| TAATGAGATTACAGCGGTGG+TGG | + | chr1.3:2979386-2979405 | MS.gene27242:CDS | 45.0% | |
| TCAAAACACCGGGGACATAA+AGG | - | chr1.3:2972973-2972992 | None:intergenic | 45.0% | |
| TCAACATCGTGTAACTCTGC+TGG | + | chr1.3:2975145-2975164 | MS.gene27242:CDS | 45.0% | |
| TCGTTAGAGTGACAGGAAGA+AGG | + | chr1.3:2978116-2978135 | MS.gene27242:intron | 45.0% | |
| TCGTTGAAAGAGGTTTGCCT+TGG | - | chr1.3:2972935-2972954 | None:intergenic | 45.0% | |
| TCTTCACCATCAAACTCCGT+CGG | + | chr1.3:2973284-2973303 | MS.gene27242:CDS | 45.0% | |
| TCTTGAGCAGCAGTTGAGAA+AGG | - | chr1.3:2979507-2979526 | None:intergenic | 45.0% | |
| TGAAAGAGGTTTGCCTTGGT+GGG | - | chr1.3:2972931-2972950 | None:intergenic | 45.0% | |
| TGACTGAATCTGGTGATTGC+AGG | + | chr1.3:2976338-2976357 | MS.gene27242:intron | 45.0% | |
| TGATCCAGATACCAGCTTCA+GGG | - | chr1.3:2976383-2976402 | None:intergenic | 45.0% | |
| TGTTCAAAGTTGAGGGTGAG+GGG | - | chr1.3:2973063-2973082 | None:intergenic | 45.0% | |
| TTCAGTAGATGCTATTCGGG+AGG | + | chr1.3:2976558-2976577 | MS.gene27242:CDS | 45.0% | |
| TTGAAAGAGGTTTGCCTTGG+TGG | - | chr1.3:2972932-2972951 | None:intergenic | 45.0% | |
| TTTCGGTTCCGTCTGTATCA+GGG | + | chr1.3:2974777-2974796 | MS.gene27242:CDS | 45.0% | |
| ! | ACAACCAACAGCTTGATGAC+CGG | - | chr1.3:2974119-2974138 | None:intergenic | 45.0% |
| ! | ATGCTTGTAGGGTGCTTAGA+TGG | + | chr1.3:2979270-2979289 | MS.gene27242:intron | 45.0% |
| ! | ATGGTGAAGAGGCGTATTGT+GGG | - | chr1.3:2973274-2973293 | None:intergenic | 45.0% |
| ! | CCCTCTTATGACTCTGCTTT+TGG | + | chr1.3:2978463-2978482 | MS.gene27242:intron | 45.0% |
| ! | TCTGTGATGTGTTGGTCTCA+AGG | + | chr1.3:2976951-2976970 | MS.gene27242:intron | 45.0% |
| ! | TGAGAAAATAGAGGGGGTGT+TGG | + | chr1.3:2978929-2978948 | MS.gene27242:intron | 45.0% |
| ! | TGCTTGTAGGGTGCTTAGAT+GGG | + | chr1.3:2979271-2979290 | MS.gene27242:intron | 45.0% |
| ! | TTGAAGAGTGGTTTGGGGAA+TGG | + | chr1.3:2974980-2974999 | MS.gene27242:CDS | 45.0% |
| ! | TTGCTATAAAAGGCACGAGC+AGG | - | chr1.3:2978572-2978591 | None:intergenic | 45.0% |
| ! | TTGGAGTTTGCTTCCATCAC+CGG | - | chr1.3:2973222-2973241 | None:intergenic | 45.0% |
| ! | TTTACAGTTGCTGTTGCTCC+TGG | + | chr1.3:2979315-2979334 | MS.gene27242:CDS | 45.0% |
| ! | TTTTCGGTTCCGTCTGTATC+AGG | + | chr1.3:2974776-2974795 | MS.gene27242:CDS | 45.0% |
| !! | AAAATAGGGTGGGTTACGGT+TGG | + | chr1.3:2978809-2978828 | MS.gene27242:intron | 45.0% |
| !! | AAGGGCTTCTAAGATACCCA+AGG | - | chr1.3:2973505-2973524 | None:intergenic | 45.0% |
| !! | AATTTGGGGCTTTTGGGCAT+AGG | + | chr1.3:2975704-2975723 | MS.gene27242:intron | 45.0% |
| !! | ATTTGGGGCTTTTGGGCATA+GGG | + | chr1.3:2975705-2975724 | MS.gene27242:intron | 45.0% |
| !! | CAAGGCTCGGATCGATTTTA+GGG | + | chr1.3:2974537-2974556 | MS.gene27242:intron | 45.0% |
| !! | GCAGATGTTGGTGTCAATTC+TGG | + | chr1.3:2976508-2976527 | MS.gene27242:CDS | 45.0% |
| !! | GGACAAAATAGGGTGGGTTA+CGG | + | chr1.3:2978805-2978824 | MS.gene27242:intron | 45.0% |
| !! | GGGAAATTGTGGTTTGGTAC+TGG | + | chr1.3:2974605-2974624 | MS.gene27242:CDS | 45.0% |
| !! | TACGCTGTCTAGGACGTTTT+CGG | + | chr1.3:2974760-2974779 | MS.gene27242:CDS | 45.0% |
| !! | TCAAGGCTCGGATCGATTTT+AGG | + | chr1.3:2974536-2974555 | MS.gene27242:intron | 45.0% |
| !! | TGAGAGTACCTCGTTGAAAG+AGG | - | chr1.3:2972945-2972964 | None:intergenic | 45.0% |
| !! | TGTTCTGAGGAACAAGCAGT+AGG | + | chr1.3:2976460-2976479 | MS.gene27242:CDS | 45.0% |
| !! | TTAGGGTTTGAGTTGTAGGC+GGG | - | chr1.3:2974170-2974189 | None:intergenic | 45.0% |
| !!! | GGGGAGTTTTAAGCTTCCAA+AGG | - | chr1.3:2972864-2972883 | None:intergenic | 45.0% |
| !!! | TCCCCGGTGTTTTGATTCAA+AGG | + | chr1.3:2972978-2972997 | MS.gene27242:CDS | 45.0% |
| AAAATTACACCGACCTCCCG+AGG | + | chr1.3:2978253-2978272 | MS.gene27242:intron | 50.0% | |
| AACCGTCAGCAGCCAGATAA+TGG | + | chr1.3:2975028-2975047 | MS.gene27242:CDS | 50.0% | |
| AACGTGGATGCTCACCTCTT+GGG | + | chr1.3:2973372-2973391 | MS.gene27242:CDS | 50.0% | |
| AAGGTTCAGTTGACCCAGCT+AGG | + | chr1.3:2976587-2976606 | MS.gene27242:CDS | 50.0% | |
| ACGTTTACACATACCTCGGG+AGG | - | chr1.3:2978269-2978288 | None:intergenic | 50.0% | |
| ACTGCGCGTGAGGACAAAAT+AGG | + | chr1.3:2978794-2978813 | MS.gene27242:intron | 50.0% | |
| AGCTGGGTCAACTGAACCTT+TGG | - | chr1.3:2976587-2976606 | None:intergenic | 50.0% | |
| AGCTTGAGAAGACCCCTTGA+AGG | - | chr1.3:2973351-2973370 | None:intergenic | 50.0% | |
| AGGTTCAGTTGACCCAGCTA+GGG | + | chr1.3:2976588-2976607 | MS.gene27242:CDS | 50.0% | |
| ATCTTCTGAGCTGTGACCTG+AGG | - | chr1.3:2979438-2979457 | None:intergenic | 50.0% | |
| ATGGTGGTCGTTAGAGTGAC+AGG | + | chr1.3:2978109-2978128 | MS.gene27242:intron | 50.0% | |
| ATTGATCTTAGGGGGCTGAG+AGG | + | chr1.3:2975657-2975676 | MS.gene27242:intron | 50.0% | |
| CACCATTATCTGGCTGCTGA+CGG | - | chr1.3:2975033-2975052 | None:intergenic | 50.0% | |
| CAGCTCATGAGATAGCTCGT+TGG | + | chr1.3:2973712-2973731 | MS.gene27242:CDS | 50.0% | |
| CGTTTACCTGGGATGGTTGT+TGG | + | chr1.3:2974881-2974900 | MS.gene27242:CDS | 50.0% | |
| CTGCGCGTGAGGACAAAATA+GGG | + | chr1.3:2978795-2978814 | MS.gene27242:intron | 50.0% | |
| GAAACTTGTCAGCCCCAGAA+AGG | - | chr1.3:2974841-2974860 | None:intergenic | 50.0% | |
| GAAAGAGGTTTGCCTTGGTG+GGG | - | chr1.3:2972930-2972949 | None:intergenic | 50.0% | |
| GAATCATCCCCAAACCCCAA+CGG | - | chr1.3:2973404-2973423 | None:intergenic | 50.0% | |
| GCGTGAGGACAAAATAGGGT+GGG | + | chr1.3:2978799-2978818 | MS.gene27242:intron | 50.0% | |
| GCGTTTGGACCAAACAACTC+TGG | + | chr1.3:2973028-2973047 | MS.gene27242:CDS | 50.0% | |
| GCTGGGTCAACTGAACCTTT+GGG | - | chr1.3:2976586-2976605 | None:intergenic | 50.0% | |
| GTCATAGTTGCTGGTACGGA+CGG | + | chr1.3:2979342-2979361 | MS.gene27242:CDS | 50.0% | |
| GTGGTTCATGGTGTAAGAGC+TGG | + | chr1.3:2979405-2979424 | MS.gene27242:CDS | 50.0% | |
| GTTCAAAGTTGAGGGTGAGG+GGG | - | chr1.3:2973062-2973081 | None:intergenic | 50.0% | |
| GTTGTAGGCGGGAATAGAGA+AGG | - | chr1.3:2974159-2974178 | None:intergenic | 50.0% | |
| GTTTGGGGATGATTCTGCGA+CGG | + | chr1.3:2973409-2973428 | MS.gene27242:CDS | 50.0% | |
| TCAACTGCTGCTCAAGATGC+TGG | + | chr1.3:2979510-2979529 | MS.gene27242:CDS | 50.0% | |
| TCAGTGACCCTTTATGTCCC+CGG | + | chr1.3:2972962-2972981 | MS.gene27242:CDS | 50.0% | |
| TCTTCTGAGCTGTGACCTGA+GGG | - | chr1.3:2979437-2979456 | None:intergenic | 50.0% | |
| TGAGGAACAAGCAGTAGGAG+TGG | + | chr1.3:2976465-2976484 | MS.gene27242:CDS | 50.0% | |
| TGCATGCTAAGGTTGTCCGA+CGG | - | chr1.3:2973303-2973322 | None:intergenic | 50.0% | |
| TGTTGCAGCTCTGCATGCTA+AGG | - | chr1.3:2973314-2973333 | None:intergenic | 50.0% | |
| TTACACATACCTCGGGAGGT+CGG | - | chr1.3:2978265-2978284 | None:intergenic | 50.0% | |
| TTCAAAGTTGAGGGTGAGGG+GGG | - | chr1.3:2973061-2973080 | None:intergenic | 50.0% | |
| TTGAGAAGACCCCTTGAAGG+AGG | - | chr1.3:2973348-2973367 | None:intergenic | 50.0% | |
| TTTGGGGATGATTCTGCGAC+GGG | + | chr1.3:2973410-2973429 | MS.gene27242:CDS | 50.0% | |
| TTTGTGTGGTGACTGGAGTC+TGG | + | chr1.3:2979193-2979212 | MS.gene27242:intron | 50.0% | |
| ! | AAGAGTGGTTTGGGGAATGG+TGG | + | chr1.3:2974983-2975002 | MS.gene27242:CDS | 50.0% |
| ! | AGCTTCAGGGTTTTCCCAGA+AGG | - | chr1.3:2976370-2976389 | None:intergenic | 50.0% |
| ! | ATCTGGAGCCCATTGACACT+AGG | - | chr1.3:2978162-2978181 | None:intergenic | 50.0% |
| ! | ATTACAGCGGTGGTGGTTCA+TGG | + | chr1.3:2979393-2979412 | MS.gene27242:CDS | 50.0% |
| ! | CTGCACTGGTGACTGGAATA+TGG | - | chr1.3:2977386-2977405 | None:intergenic | 50.0% |
| ! | CTTTTTCCAGCACCCTAGCT+GGG | - | chr1.3:2976603-2976622 | None:intergenic | 50.0% |
| ! | GATGGTGAAGAGGCGTATTG+TGG | - | chr1.3:2973275-2973294 | None:intergenic | 50.0% |
| ! | GGTCATCAAGCTGTTGGTTG+TGG | + | chr1.3:2974118-2974137 | MS.gene27242:intron | 50.0% |
| ! | TAGCTGCATTGGCACGTCAA+CGG | + | chr1.3:2979457-2979476 | MS.gene27242:CDS | 50.0% |
| ! | TTCTGGGAAAACCCTGAAGC+TGG | + | chr1.3:2976369-2976388 | MS.gene27242:CDS | 50.0% |
| ! | TTTGGGAGACAGCGGGTTTA+TGG | + | chr1.3:2977342-2977361 | MS.gene27242:CDS | 50.0% |
| !! | GACGGAGTTTGATGGTGAAG+AGG | - | chr1.3:2973285-2973304 | None:intergenic | 50.0% |
| !! | GATAACTCGACTCTGAAGCG+TGG | + | chr1.3:2974917-2974936 | MS.gene27242:CDS | 50.0% |
| !! | TTCATTCTGGCTTGAGCTGC+TGG | - | chr1.3:2972824-2972843 | None:intergenic | 50.0% |
| !! | TTTGGGGCTTTTGGGCATAG+GGG | + | chr1.3:2975706-2975725 | MS.gene27242:intron | 50.0% |
| AACCCCAGGACGCACAAACA+GGG | - | chr1.3:2974684-2974703 | None:intergenic | 55.0% | |
| AACCCTGTTTGTGCGTCCTG+GGG | + | chr1.3:2974679-2974698 | MS.gene27242:CDS | 55.0% | |
| ACAATGGCTGCCCGTTTACC+TGG | + | chr1.3:2974869-2974888 | MS.gene27242:CDS | 55.0% | |
| ATCGACGGCCCTGATACAGA+CGG | - | chr1.3:2974788-2974807 | None:intergenic | 55.0% | |
| ATGATTCTGCGACGGGAGGA+TGG | + | chr1.3:2973417-2973436 | MS.gene27242:CDS | 55.0% | |
| CAACCCTGTTTGTGCGTCCT+GGG | + | chr1.3:2974678-2974697 | MS.gene27242:CDS | 55.0% | |
| CAACGTGGATGCTCACCTCT+TGG | + | chr1.3:2973371-2973390 | MS.gene27242:CDS | 55.0% | |
| CAAGCAGTAGGAGTGGCAGA+TGG | + | chr1.3:2976472-2976491 | MS.gene27242:CDS | 55.0% | |
| CAATGGCTGCCCGTTTACCT+GGG | + | chr1.3:2974870-2974889 | MS.gene27242:CDS | 55.0% | |
| CCAAAACCTATCAGGGTCCC+TGG | - | chr1.3:2973742-2973761 | None:intergenic | 55.0% | |
| CCAGCAACTATGACATCGCC+AGG | - | chr1.3:2979336-2979355 | None:intergenic | 55.0% | |
| CCTGGCGATGTCATAGTTGC+TGG | + | chr1.3:2979333-2979352 | MS.gene27242:CDS | 55.0% | |
| CCTTCACCAACAACCATCCC+AGG | - | chr1.3:2974890-2974909 | None:intergenic | 55.0% | |
| CGCGTGAGGACAAAATAGGG+TGG | + | chr1.3:2978798-2978817 | MS.gene27242:intron | 55.0% | |
| CTGACCGGTCATCAAGCTGT+TGG | + | chr1.3:2974112-2974131 | MS.gene27242:intron | 55.0% | |
| GATGCTCACCTCTTGGGTGA+TGG | + | chr1.3:2973378-2973397 | MS.gene27242:CDS | 55.0% | |
| GCATAATGGTCTCCCCACCA+AGG | + | chr1.3:2972915-2972934 | MS.gene27242:CDS | 55.0% | |
| GGAGCCCATTGACACTAGGA+TGG | - | chr1.3:2978158-2978177 | None:intergenic | 55.0% | |
| GGAGGCGAACCAGAGTTGTT+TGG | - | chr1.3:2973040-2973059 | None:intergenic | 55.0% | |
| GGGTCTTCTCAAGCTCAACG+TGG | + | chr1.3:2973356-2973375 | MS.gene27242:CDS | 55.0% | |
| GGTTGTCCGACGGAGTTTGA+TGG | - | chr1.3:2973293-2973312 | None:intergenic | 55.0% | |
| GTAGGAGTGGCAGATGGTGT+TGG | + | chr1.3:2976478-2976497 | MS.gene27242:CDS | 55.0% | |
| TCGCTGGAGTCCTCCTTCAA+GGG | + | chr1.3:2973335-2973354 | MS.gene27242:CDS | 55.0% | |
| TGCAGAGCTGCAACATTCGC+TGG | + | chr1.3:2973319-2973338 | MS.gene27242:CDS | 55.0% | |
| TTCGCTGGAGTCCTCCTTCA+AGG | + | chr1.3:2973334-2973353 | MS.gene27242:CDS | 55.0% | |
| ! | AGCTCGTGTTGCTGAAGCCT+TGG | + | chr1.3:2973485-2973504 | MS.gene27242:CDS | 55.0% |
| ! | AGCTGCATTGGCACGTCAAC+GGG | + | chr1.3:2979458-2979477 | MS.gene27242:CDS | 55.0% |
| ! | CATGTTGCTGCACTGGTGAC+TGG | - | chr1.3:2977393-2977412 | None:intergenic | 55.0% |
| ! | CCAGGGACCCTGATAGGTTT+TGG | + | chr1.3:2973739-2973758 | MS.gene27242:intron | 55.0% |
| ! | CCTGGGATGGTTGTTGGTGA+AGG | + | chr1.3:2974887-2974906 | MS.gene27242:CDS | 55.0% |
| ! | CTGGAATCTAAGGCAACCCC+AGG | - | chr1.3:2974698-2974717 | None:intergenic | 55.0% |
| ! | GCTCGTGTTGCTGAAGCCTT+GGG | + | chr1.3:2973486-2973505 | MS.gene27242:CDS | 55.0% |
| !! | AACGGGCTCTGGACAAAGAC+AGG | + | chr1.3:2979475-2979494 | MS.gene27242:CDS | 55.0% |
| !! | ACTCGACTCTGAAGCGTGGT+CGG | + | chr1.3:2974921-2974940 | MS.gene27242:CDS | 55.0% |
| !! | GCTTTTTCCAGCACCCTAGC+TGG | - | chr1.3:2976604-2976623 | None:intergenic | 55.0% |
| !! | GTGAAGGAAGGAGAGCGCTT+TGG | - | chr1.3:2973241-2973260 | None:intergenic | 55.0% |
| !! | TGTATCAGGGCCGTCGATTC+AGG | + | chr1.3:2974790-2974809 | MS.gene27242:CDS | 55.0% |
| AAAGTTGAGGGTGAGGGGGG+AGG | - | chr1.3:2973058-2973077 | None:intergenic | 60.0% | |
| AGATAGCTCGTTGGGCTGCC+AGG | + | chr1.3:2973721-2973740 | MS.gene27242:CDS | 60.0% | |
| AGTTGACCCAGCTAGGGTGC+TGG | + | chr1.3:2976594-2976613 | MS.gene27242:CDS | 60.0% | |
| ATTCTGCGACGGGAGGATGG+AGG | + | chr1.3:2973420-2973439 | MS.gene27242:CDS | 60.0% | |
| CAACCCCAGGACGCACAAAC+AGG | - | chr1.3:2974685-2974704 | None:intergenic | 60.0% | |
| CAACGGGCACGTCATGAGCA+GGG | - | chr1.3:2975171-2975190 | None:intergenic | 60.0% | |
| CGCTGGAGTCCTCCTTCAAG+GGG | + | chr1.3:2973336-2973355 | MS.gene27242:CDS | 60.0% | |
| GATAGCTCGTTGGGCTGCCA+GGG | + | chr1.3:2973722-2973741 | MS.gene27242:CDS | 60.0% | |
| GCAACCCTGTTTGTGCGTCC+TGG | + | chr1.3:2974677-2974696 | MS.gene27242:CDS | 60.0% | |
| GCTATTCGGGAGGAGCCCAA+AGG | + | chr1.3:2976568-2976587 | MS.gene27242:CDS | 60.0% | |
| GTGATGGCCGTTGGGGTTTG+GGG | + | chr1.3:2973394-2973413 | MS.gene27242:CDS | 60.0% | |
| TCAACGGGCACGTCATGAGC+AGG | - | chr1.3:2975172-2975191 | None:intergenic | 60.0% | |
| TTGCTTCTCCTCACGGGCAG+CGG | - | chr1.3:2975197-2975216 | None:intergenic | 60.0% | |
| ! | AAGAGCTGGCTTCAGCCCTC+AGG | + | chr1.3:2979419-2979438 | MS.gene27242:CDS | 60.0% |
| ! | ACCTCTTGGGTGATGGCCGT+TGG | + | chr1.3:2973385-2973404 | MS.gene27242:CDS | 60.0% |
| ! | ATTGGCACGTCAACGGGCTC+TGG | + | chr1.3:2979464-2979483 | MS.gene27242:CDS | 60.0% |
| ! | CCTCTTGGGTGATGGCCGTT+GGG | + | chr1.3:2973386-2973405 | MS.gene27242:CDS | 60.0% |
| ! | CTCTTGGGTGATGGCCGTTG+GGG | + | chr1.3:2973387-2973406 | MS.gene27242:CDS | 60.0% |
| ! | GGAGGATGGAGGCACAGTTG+TGG | + | chr1.3:2973431-2973450 | MS.gene27242:CDS | 60.0% |
| ! | GGAGTGGCAGATGGTGTTGG+TGG | + | chr1.3:2976481-2976500 | MS.gene27242:CDS | 60.0% |
| ! | GGATGGAGGCACAGTTGTGG+TGG | + | chr1.3:2973434-2973453 | MS.gene27242:CDS | 60.0% |
| ! | GGTGATGGCCGTTGGGGTTT+GGG | + | chr1.3:2973393-2973412 | MS.gene27242:CDS | 60.0% |
| !! | GGCAGATGGTGTTGGTGGCT+GGG | + | chr1.3:2976486-2976505 | MS.gene27242:CDS | 60.0% |
| !! | GTTGGTGGCTGGGCAGATGT+TGG | + | chr1.3:2976496-2976515 | MS.gene27242:CDS | 60.0% |
| !! | TGGCAGATGGTGTTGGTGGC+TGG | + | chr1.3:2976485-2976504 | MS.gene27242:CDS | 60.0% |
| CCCAACGGCCATCACCCAAG+AGG | - | chr1.3:2973389-2973408 | None:intergenic | 65.0% | |
| GGCTGCCCGTTTACCTGGGA+TGG | + | chr1.3:2974874-2974893 | MS.gene27242:CDS | 65.0% | |
| GGGGATGATTCTGCGACGGG+AGG | + | chr1.3:2973413-2973432 | MS.gene27242:CDS | 65.0% | |
| ! | CTCACGGGCAGCGGTGTCAA+CGG | - | chr1.3:2975188-2975207 | None:intergenic | 65.0% |
| ! | GGGTGATGGCCGTTGGGGTT+TGG | + | chr1.3:2973392-2973411 | MS.gene27242:CDS | 65.0% |
| ! | TCACGGGCAGCGGTGTCAAC+GGG | - | chr1.3:2975187-2975206 | None:intergenic | 65.0% |
| CGTTGACACCGCTGCCCGTG+AGG | + | chr1.3:2975186-2975205 | MS.gene27242:CDS | 70.0% | |
| GGGCTGCCAGGGACCCTGAT+AGG | + | chr1.3:2973733-2973752 | MS.gene27242:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 2972817 | 2979608 | 2972817 | ID=MS.gene27242 |
| chr1.3 | mRNA | 2972817 | 2979608 | 2972817 | ID=MS.gene27242.t1;Parent=MS.gene27242 |
| chr1.3 | exon | 2972817 | 2973754 | 2972817 | ID=MS.gene27242.t1.exon1;Parent=MS.gene27242.t1 |
| chr1.3 | CDS | 2972817 | 2973754 | 2972817 | ID=cds.MS.gene27242.t1;Parent=MS.gene27242.t1 |
| chr1.3 | exon | 2974541 | 2975242 | 2974541 | ID=MS.gene27242.t1.exon2;Parent=MS.gene27242.t1 |
| chr1.3 | CDS | 2974541 | 2975242 | 2974541 | ID=cds.MS.gene27242.t1;Parent=MS.gene27242.t1 |
| chr1.3 | exon | 2976360 | 2976684 | 2976360 | ID=MS.gene27242.t1.exon3;Parent=MS.gene27242.t1 |
| chr1.3 | CDS | 2976360 | 2976684 | 2976360 | ID=cds.MS.gene27242.t1;Parent=MS.gene27242.t1 |
| chr1.3 | exon | 2977325 | 2977474 | 2977325 | ID=MS.gene27242.t1.exon4;Parent=MS.gene27242.t1 |
| chr1.3 | CDS | 2977325 | 2977474 | 2977325 | ID=cds.MS.gene27242.t1;Parent=MS.gene27242.t1 |
| chr1.3 | exon | 2979312 | 2979608 | 2979312 | ID=MS.gene27242.t1.exon5;Parent=MS.gene27242.t1 |
| chr1.3 | CDS | 2979312 | 2979608 | 2979312 | ID=cds.MS.gene27242.t1;Parent=MS.gene27242.t1 |
| Gene Sequence |
| Protein sequence |
