AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27383

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27383.t1 MTR_5g007630 87.054 757 81 3 1 756 1 741 0.0 1338
MS.gene27383.t1 MTR_6g075440 76.812 759 156 3 1 754 1 744 0.0 1204
MS.gene27383.t1 MTR_6g075440 76.812 759 156 3 1 754 1 744 0.0 1204
MS.gene27383.t1 MTR_6g075290 65.891 774 238 5 1 754 1 768 0.0 991
MS.gene27383.t1 MTR_6g477760 70.059 678 179 3 91 746 20 695 0.0 941
MS.gene27383.t1 MTR_6g075290 62.274 774 225 7 1 754 1 727 0.0 912
MS.gene27383.t1 MTR_6g075390 64.177 723 180 7 1 717 1 650 0.0 875
MS.gene27383.t1 MTR_6g075410 57.596 757 221 9 1 749 1 665 0.0 815
MS.gene27383.t1 MTR_6g075290 69.908 545 147 4 221 754 28 566 0.0 725
MS.gene27383.t1 MTR_6g076060 73.478 460 117 1 301 755 14 473 0.0 666
MS.gene27383.t1 MTR_3g109030 38.889 594 328 13 184 756 73 652 2.99e-133 412
MS.gene27383.t1 MTR_3g091080 39.073 604 327 14 167 745 55 642 3.05e-133 411
MS.gene27383.t1 MTR_2g460590 38.765 583 318 14 184 743 43 609 3.80e-133 410
MS.gene27383.t1 MTR_4g130820 39.353 587 322 11 184 751 99 670 4.02e-131 406
MS.gene27383.t1 MTR_4g058730 39.153 567 316 11 184 736 59 610 1.13e-129 399
MS.gene27383.t1 MTR_1g028370 36.897 580 330 14 184 745 83 644 3.14e-126 393
MS.gene27383.t1 MTR_2g094860 38.128 577 328 12 184 746 77 638 4.43e-126 392
MS.gene27383.t1 MTR_7g117310 38.382 581 324 13 184 745 29 594 1.11e-125 390
MS.gene27383.t1 MTR_7g117310 38.382 581 324 13 184 745 83 648 3.51e-125 390
MS.gene27383.t1 MTR_7g117310 38.382 581 324 13 184 745 95 660 5.02e-125 390
MS.gene27383.t1 MTR_7g034605 36.960 579 329 12 184 741 44 607 2.99e-123 384
MS.gene27383.t1 MTR_8g027755 35.945 587 332 11 183 744 84 651 4.82e-121 380
MS.gene27383.t1 MTR_1g064240 36.968 587 340 11 184 756 71 641 4.91e-119 374
MS.gene27383.t1 MTR_3g088875 37.177 581 325 14 184 741 36 599 1.83e-117 370
MS.gene27383.t1 MTR_8g464570 36.007 586 333 15 183 743 61 629 2.08e-111 353
MS.gene27383.t1 MTR_2g081110 34.192 582 342 12 184 743 63 625 8.46e-105 336
MS.gene27383.t1 MTR_7g012260 35.085 590 348 13 184 751 109 685 1.56e-93 307
MS.gene27383.t1 MTR_6g075320 50.459 327 75 7 1 301 1 266 1.16e-82 265
MS.gene27383.t1 MTR_6g075460 78.000 100 22 0 656 755 26 125 1.07e-44 159
MS.gene27383.t1 MTR_2g094810 43.925 107 58 2 266 371 15 120 6.09e-20 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27383.t1 AT3G17700 58.161 772 290 9 2 752 3 762 0.0 860
MS.gene27383.t1 AT3G17690 56.054 735 290 10 33 751 9 726 0.0 825
MS.gene27383.t1 AT3G17700 58.174 679 251 9 2 659 3 669 0.0 762
MS.gene27383.t1 AT3G17690 55.399 639 254 9 33 655 9 632 0.0 708
MS.gene27383.t1 AT3G17690 52.381 525 221 8 29 537 5 516 0.0 539
MS.gene27383.t1 AT5G53130 40.000 570 306 11 184 736 84 634 1.06e-134 415
MS.gene27383.t1 AT1G19780 40.933 579 307 13 184 741 97 661 1.88e-134 416
MS.gene27383.t1 AT1G01340 37.819 587 331 14 183 751 62 632 2.10e-131 406
MS.gene27383.t1 AT1G01340 37.819 587 331 14 183 751 67 637 2.17e-131 407
MS.gene27383.t1 AT2G24610 40.206 582 314 15 184 745 72 639 3.36e-130 404
MS.gene27383.t1 AT2G28260 38.850 574 318 12 184 741 28 584 4.15e-130 401
MS.gene27383.t1 AT1G15990 40.306 588 311 14 184 749 90 659 4.16e-130 404
MS.gene27383.t1 AT2G28260 38.850 574 318 12 184 741 68 624 5.78e-130 402
MS.gene27383.t1 AT2G24610 39.425 591 324 14 184 754 87 663 9.11e-130 403
MS.gene27383.t1 AT4G01010 37.372 586 336 11 183 751 67 638 9.52e-130 402
MS.gene27383.t1 AT4G01010 37.372 586 336 11 183 751 67 638 9.52e-130 402
MS.gene27383.t1 AT4G30360 37.907 583 328 12 184 746 71 639 3.96e-129 401
MS.gene27383.t1 AT4G30560 40.134 598 306 14 184 751 77 652 1.25e-128 399
MS.gene27383.t1 AT4G30560 40.134 598 306 14 184 751 77 652 1.25e-128 399
MS.gene27383.t1 AT4G30560 40.134 598 306 14 184 751 77 652 1.25e-128 399
MS.gene27383.t1 AT4G30560 40.134 598 306 14 184 751 103 678 2.00e-128 399
MS.gene27383.t1 AT4G30560 40.134 598 306 14 184 751 103 678 2.00e-128 399
MS.gene27383.t1 AT2G23980 39.931 581 310 13 184 741 76 640 1.40e-125 392
MS.gene27383.t1 AT2G23980 39.931 581 310 13 184 741 103 667 2.04e-125 392
MS.gene27383.t1 AT2G23980 39.931 581 310 13 184 741 103 667 2.04e-125 392
MS.gene27383.t1 AT2G23980 39.931 581 310 13 184 741 103 667 2.04e-125 392
MS.gene27383.t1 AT2G23980 39.931 581 310 13 184 741 103 667 2.04e-125 392
MS.gene27383.t1 AT2G23980 39.931 581 310 13 184 741 103 667 2.04e-125 392
MS.gene27383.t1 AT5G57940 39.206 579 316 11 184 741 88 651 2.08e-125 391
MS.gene27383.t1 AT5G57940 39.206 579 316 11 184 741 88 651 2.08e-125 391
MS.gene27383.t1 AT5G57940 39.206 579 316 11 184 741 81 644 2.08e-125 391
MS.gene27383.t1 AT2G23980 38.576 604 309 14 184 741 103 690 2.01e-120 380
MS.gene27383.t1 AT2G23980 38.576 604 309 14 184 741 103 690 2.01e-120 380
MS.gene27383.t1 AT2G23980 38.576 604 309 14 184 741 103 690 2.01e-120 380
MS.gene27383.t1 AT2G23980 38.576 604 309 14 184 741 103 690 2.01e-120 380
MS.gene27383.t1 AT5G14870 37.158 584 327 16 184 744 40 606 9.02e-120 376
MS.gene27383.t1 AT2G46430 37.438 601 319 16 184 751 72 648 5.13e-119 374
MS.gene27383.t1 AT2G46430 37.438 601 319 16 184 751 72 648 5.13e-119 374
MS.gene27383.t1 AT3G48010 36.408 618 348 17 151 743 16 613 4.68e-118 372
MS.gene27383.t1 AT5G54250 33.333 588 348 14 184 743 79 650 6.22e-102 329
MS.gene27383.t1 AT5G54250 33.333 588 348 14 184 743 79 650 6.22e-102 329
MS.gene27383.t1 AT5G54250 33.333 588 348 14 184 743 79 650 6.22e-102 329
MS.gene27383.t1 AT5G15410 36.332 578 329 10 184 735 113 677 9.84e-101 327
MS.gene27383.t1 AT5G15410 36.332 578 329 10 184 735 112 676 1.25e-100 326
MS.gene27383.t1 AT5G54250 33.220 587 345 15 184 743 79 645 5.82e-99 321
MS.gene27383.t1 AT1G19780 40.173 463 242 13 300 741 2 450 9.19e-95 305
MS.gene27383.t1 AT2G46450 31.463 588 346 14 190 750 35 592 7.93e-88 290
MS.gene27383.t1 AT2G46450 31.463 588 346 14 190 750 35 592 7.93e-88 290
MS.gene27383.t1 AT2G46440 32.943 598 339 16 190 751 35 606 8.38e-88 289
MS.gene27383.t1 AT2G46450 30.952 588 326 16 190 750 22 556 3.35e-80 269
MS.gene27383.t1 AT2G46450 30.952 588 326 16 190 750 35 569 4.38e-80 269
MS.gene27383.t1 AT2G46440 35.616 438 225 14 349 751 13 428 1.06e-61 214

Find 171 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTCCACAATTCTCTTTA+TGG 0.072433 6.4:+50548153 MS.gene27383:intron
TTCTGCTCTTCATGTATTCC+TGG 0.236305 6.4:+50548210 MS.gene27383:CDS
AATATGTGTATGCACTCTTT+TGG 0.256005 6.4:+50550169 MS.gene27383:CDS
GTTTATTGTGCGTGGAAAAT+TGG 0.274539 6.4:+50552234 MS.gene27383:CDS
TGAAGAATTCAAACAATCTT+TGG 0.276073 6.4:-50550076 None:intergenic
TTCCATTCCTATGGCTTCTC+TGG 0.284126 6.4:+50547515 MS.gene27383:CDS
CTTTGCAGCAAACAGAATTC+AGG 0.285107 6.4:+50553175 MS.gene27383:CDS
GAGTCAAGGGTTGTTGGTGC+TGG 0.301405 6.4:+50548835 MS.gene27383:CDS
ATCTGGGAATATATTGTATA+AGG 0.301572 6.4:-50549216 None:intergenic
GGTTCATGCTGGTATCTCTT+TGG 0.309664 6.4:+50549355 MS.gene27383:CDS
ATGTCTGTCTGGAGATCTTC+TGG 0.319596 6.4:-50551774 None:intergenic
TGAAAAGGATTTCCAGTTGC+AGG 0.328009 6.4:-50547639 None:intergenic
GCTTACCAGAAGAACTTAAA+AGG 0.333543 6.4:+50551562 MS.gene27383:CDS
AAGGGGTGTTCCTGAGAAAA+TGG 0.334550 6.4:+50551737 MS.gene27383:CDS
ATACAGACGACATACATTAA+AGG 0.335319 6.4:+50552169 MS.gene27383:CDS
TATGGTGACGCCAAAGGATA+TGG 0.337298 6.4:+50548171 MS.gene27383:CDS
GGACCACTCATTTGGCTAAC+AGG 0.342078 6.4:-50547603 None:intergenic
CAGAACTTTCTTCAGGCTCT+TGG 0.347851 6.4:+50551246 MS.gene27383:CDS
CTGGTATCTCTTTGGCCTAC+AGG 0.353050 6.4:+50549363 MS.gene27383:CDS
CCCTAGACGTAGAAGATTCT+TGG 0.356560 6.4:-50549191 None:intergenic
AATTGCGACCAAGCAAAATA+TGG 0.356880 6.4:-50548283 None:intergenic
CTGAATTCTGTTTGCTGCAA+AGG 0.357315 6.4:-50553174 None:intergenic
ATGCTATCCGGCCATGTTGT+TGG 0.360446 6.4:+50549334 MS.gene27383:CDS
TTAGGTATGAATCACCTTAC+TGG 0.360958 6.4:+50553147 MS.gene27383:intron
TCACGAATGGCGTCTAAGAT+AGG 0.365376 6.4:-50552139 None:intergenic
CGATGCATGGAGCCAGGATC+AGG 0.373012 6.4:+50550050 MS.gene27383:CDS
TTTATCCTACCAAGTTCCTT+GGG 0.382855 6.4:+50549148 MS.gene27383:CDS
CCAAGTTCCTTGGGGTCATC+AGG 0.385649 6.4:+50549157 MS.gene27383:CDS
AAACATACAGAACTTTCTTC+AGG 0.386919 6.4:+50551239 MS.gene27383:CDS
CTCTTTACAATGTCCATCAT+AGG 0.393451 6.4:+50551183 MS.gene27383:CDS
CATATAATGGACCACTCATT+TGG 0.395071 6.4:-50547611 None:intergenic
AGTCAAGGGTTGTTGGTGCT+GGG 0.402836 6.4:+50548836 MS.gene27383:CDS
ATTTATCCTACCAAGTTCCT+TGG 0.403214 6.4:+50549147 MS.gene27383:CDS
TGCTTCAATTTCCATTCCTA+TGG 0.403389 6.4:+50547506 MS.gene27383:CDS
GAGGGTTAACCAATGTTTGC+GGG 0.406787 6.4:+50549969 MS.gene27383:intron
TTCAGGTTGCATGGAGATAC+AGG 0.409660 6.4:+50553192 MS.gene27383:CDS
TGTTCCTGAGAAAATGGTTC+TGG 0.409988 6.4:+50551743 MS.gene27383:CDS
TTATATGCTTCTCCTGCAAC+TGG 0.411022 6.4:+50547627 MS.gene27383:CDS
CCGGTATGTCCGACAAGATT+CGG 0.418379 6.4:-50547555 None:intergenic
CGTCGGAGAGGATGGAATTC+CGG 0.422155 6.4:+50552261 MS.gene27383:CDS
TACAATGTCCATCATAGGAT+TGG 0.422433 6.4:+50551188 MS.gene27383:CDS
AGGAAGTAAAATTCTCAGTC+AGG 0.426764 6.4:+50552189 MS.gene27383:CDS
TTGCGGAGCCCTCGTGTTCA+AGG 0.432055 6.4:+50552591 MS.gene27383:CDS
TCTCCTGAGTCAAGGGTTGT+TGG 0.433479 6.4:+50548829 MS.gene27383:CDS
CTGAGCAACTTTGAAGTAAG+TGG 0.434954 6.4:-50547805 None:intergenic
TAGGGTCATCCTCAGCCATA+TGG 0.436659 6.4:-50552120 None:intergenic
AATCTTTGGCGCCCTGATCC+TGG 0.437765 6.4:-50550062 None:intergenic
ACTATTATATTATTCTGAAA+AGG 0.441915 6.4:-50547654 None:intergenic
TTTCTTAAACATTCTTCTCC+AGG 0.444710 6.4:+50548540 MS.gene27383:CDS
GGCAGGCTGAACGGTATAGT+TGG 0.446424 6.4:+50551706 MS.gene27383:CDS
GTTGCAGGAGAAGCATATAA+TGG 0.448760 6.4:-50547624 None:intergenic
CCTGATGACCCCAAGGAACT+TGG 0.451927 6.4:-50549157 None:intergenic
TCAAATATAGTGGGAGCTCT+TGG 0.453330 6.4:-50547837 None:intergenic
CTAATTGGTCAGTCTCCAAC+TGG 0.454732 6.4:+50549259 MS.gene27383:CDS
GCTGCAAAGGATTTCCAGTA+AGG 0.455405 6.4:-50553161 None:intergenic
GTCACGCAGGAGAGTGCGGC+AGG 0.456063 6.4:+50551689 MS.gene27383:intron
TACCTTGGGATCAAATATAG+TGG 0.457381 6.4:-50547847 None:intergenic
ACAATGTCCATCATAGGATT+GGG 0.458826 6.4:+50551189 MS.gene27383:CDS
TGTTGTATCGCCTCTTCCTC+AGG 0.459170 6.4:+50548927 MS.gene27383:CDS
CAGAATAATATAATAGTGGC+AGG 0.459304 6.4:+50547660 MS.gene27383:CDS
TCCCCTTCTGATAACGGAAC+CGG 0.459445 6.4:-50552280 None:intergenic
GTGGGACAAGTAGTACAATA+AGG 0.459611 6.4:-50547786 None:intergenic
AATGAACACTTGTTAAGGTC+TGG 0.463846 6.4:+50547741 MS.gene27383:CDS
GATTCATATTCGAGTCAGCC+TGG 0.465722 6.4:+50549281 MS.gene27383:CDS
CTTATGTTTCTCCTGAGTCA+AGG 0.468126 6.4:+50548821 MS.gene27383:CDS
CCAAGAATCTTCTACGTCTA+GGG 0.470726 6.4:+50549191 MS.gene27383:CDS
TGGTTAAGCATCTTACTGTT+CGG 0.472124 6.4:-50552503 None:intergenic
GCAGGCTGAACGGTATAGTT+GGG 0.472885 6.4:+50551707 MS.gene27383:CDS
CTTCTTACTCTATGTGGAGA+AGG 0.474707 6.4:+50548326 MS.gene27383:CDS
TTATGTTTCTCCTGAGTCAA+GGG 0.478763 6.4:+50548822 MS.gene27383:CDS
AAAATAAAGCTTCACGGCCA+GGG 0.481814 6.4:+50552468 MS.gene27383:CDS
TTGGAGAGCGTCGGAGAGGA+TGG 0.482934 6.4:+50552253 MS.gene27383:CDS
CCACGTGTTTCTGACAGAAT+CGG 0.483690 6.4:-50547423 None:intergenic
TATTAACAAATTTGAAGAGA+TGG 0.501093 6.4:-50551803 None:intergenic
GCCATGTTGTTGGTTCATGC+TGG 0.504222 6.4:+50549344 MS.gene27383:CDS
CCTTCAGAAGAAACATTTCG+AGG 0.504344 6.4:+50547475 MS.gene27383:CDS
ATAGTGGCAGGAAACAAAGT+AGG 0.505404 6.4:+50547672 MS.gene27383:CDS
GTATAGTTGGGCTGCAACAA+GGG 0.505727 6.4:+50551719 MS.gene27383:CDS
CAAGCATCCCCTTCTGATAA+CGG 0.505912 6.4:-50552286 None:intergenic
CCTCGAAATGTTTCTTCTGA+AGG 0.507653 6.4:-50547475 None:intergenic
GCCAAGAATCTTCTACGTCT+AGG 0.508077 6.4:+50549190 MS.gene27383:CDS
ATTTATAATGAAATTTGCCC+AGG 0.509046 6.4:-50549299 None:intergenic
AAGATATATACCTGAGGAAG+AGG 0.513415 6.4:-50548937 None:intergenic
TCATAACGATGCATGGAGCC+AGG 0.515573 6.4:+50550044 MS.gene27383:CDS
CCGAATCTTGTCGGACATAC+CGG 0.517871 6.4:+50547555 MS.gene27383:CDS
GATGGCGTCTTATGTCTGTC+TGG 0.521052 6.4:-50551785 None:intergenic
TCCCACTATATTTGATCCCA+AGG 0.522705 6.4:+50547845 MS.gene27383:CDS
GTCAAGGGTTGTTGGTGCTG+GGG 0.527130 6.4:+50548837 MS.gene27383:CDS
TTGTTAAGGTCTGGACAACT+AGG 0.527946 6.4:+50547750 MS.gene27383:CDS
ACCCTAGTTTCTATCGTAAG+TGG 0.530830 6.4:-50550138 None:intergenic
GGTATAGTTGGGCTGCAACA+AGG 0.533253 6.4:+50551718 MS.gene27383:CDS
CCTCGTGGTACGAAGCGGAC+CGG 0.533441 6.4:-50547574 None:intergenic
CACGAATGGCGTCTAAGATA+GGG 0.533961 6.4:-50552138 None:intergenic
CTCGTGTTCAAGGAGTTATA+AGG 0.533997 6.4:+50552601 MS.gene27383:CDS
TGTTGTACAACCTTCGCGTG+AGG 0.535852 6.4:-50548243 None:intergenic
AGAGGGTTAACCAATGTTTG+CGG 0.537367 6.4:+50549968 MS.gene27383:intron
CAAGAGTCCCAATCCTATGA+TGG 0.538094 6.4:-50551196 None:intergenic
CAGCAAATCAGTACTCTGGC+TGG 0.539258 6.4:+50551126 MS.gene27383:intron
AGATTCGGTTGCCTCTCGTA+TGG 0.545158 6.4:-50547540 None:intergenic
GGGTGGTCTTGTACAGAAGA+TGG 0.547676 6.4:+50552210 MS.gene27383:CDS
GGCAGGCATCCCGCAAACAT+TGG 0.547918 6.4:-50549978 None:intergenic
TACCACTTACGATAGAAACT+AGG 0.552629 6.4:+50550136 MS.gene27383:CDS
GACTCGAATATGAATCCAGT+TGG 0.554607 6.4:-50549274 None:intergenic
AGTTAGATTAGTGCGATGGC+AGG 0.557613 6.4:-50549995 None:intergenic
GATGCATGGAGCCAGGATCA+GGG 0.558890 6.4:+50550051 MS.gene27383:CDS
AGGGTCATCCTCAGCCATAT+GGG 0.559056 6.4:-50552119 None:intergenic
ATCTGTCACGCAGGAGAGTG+CGG 0.559614 6.4:+50551685 MS.gene27383:intron
CAAACAGAATTCAGGTTGCA+TGG 0.560432 6.4:+50553183 MS.gene27383:CDS
TCCGGTTCCGTTATCAGAAG+GGG 0.560727 6.4:+50552279 MS.gene27383:CDS
TCTCTTTATGGTGACGCCAA+AGG 0.562339 6.4:+50548165 MS.gene27383:CDS
GTTGTACAACCTTCGCGTGA+GGG 0.564009 6.4:-50548242 None:intergenic
ATTCCGGTTCCGTTATCAGA+AGG 0.567052 6.4:+50552277 MS.gene27383:CDS
ACTTCCCACACAAAATAGCT+TGG 0.569266 6.4:-50551159 None:intergenic
GAGAGGCAACCGAATCTTGT+CGG 0.569348 6.4:+50547546 MS.gene27383:CDS
TTATCAAACATTGATGCCAT+AGG 0.570396 6.4:+50553253 MS.gene27383:CDS
ACTTTCTTCAGGCTCTTGGA+CGG 0.570515 6.4:+50551250 MS.gene27383:CDS
GGAGAGTGCGGCAGGCTGAA+CGG 0.571608 6.4:+50551697 MS.gene27383:intron
TAGTGGCAGGAAACAAAGTA+GGG 0.572650 6.4:+50547673 MS.gene27383:CDS
GGAAGTAAAATTCTCAGTCA+GGG 0.572657 6.4:+50552190 MS.gene27383:CDS
ATTGTCATCATAACGATGCA+TGG 0.576364 6.4:+50550037 MS.gene27383:CDS
CTTCTGAAGGTAGAATCTTG+AGG 0.578165 6.4:-50547462 None:intergenic
GCACCAACAACCCTTGACTC+AGG 0.578857 6.4:-50548832 None:intergenic
CTTCTTCAATGTCTTTAGCA+CGG 0.579605 6.4:-50552545 None:intergenic
CTGTATTAGTCTCTCACGAA+TGG 0.579807 6.4:-50552152 None:intergenic
AATACAGCAAATCAGTACTC+TGG 0.582109 6.4:+50551122 MS.gene27383:intron
GTTCTTCTGGTAAGCGACGA+TGG 0.583542 6.4:-50551554 None:intergenic
TTCTTCAGGCTCTTGGACGG+AGG 0.589094 6.4:+50551253 MS.gene27383:CDS
GCATGAACCAACAACATGGC+CGG 0.590290 6.4:-50549341 None:intergenic
GTGGTGAAGAACTTCTAAGA+TGG 0.591370 6.4:+50552308 MS.gene27383:CDS
ACCTTGGGATCAAATATAGT+GGG 0.595230 6.4:-50547846 None:intergenic
ATCCAGAGAAGCCATAGGAA+TGG 0.596327 6.4:-50547517 None:intergenic
TGAGCAACTTTGAAGTAAGT+GGG 0.601206 6.4:-50547804 None:intergenic
CGTCACCATAAAGAGAATTG+TGG 0.602324 6.4:-50548158 None:intergenic
ACCACTTACGATAGAAACTA+GGG 0.602596 6.4:+50550137 MS.gene27383:CDS
TTCCGGTTCCGTTATCAGAA+GGG 0.604864 6.4:+50552278 MS.gene27383:CDS
GAAGAAACATTTCGAGGACA+CGG 0.606041 6.4:+50547481 MS.gene27383:CDS
GCGTGAGGGTTCATAACACC+AGG 0.607336 6.4:-50548228 None:intergenic
AAGATGGTGTTTATTGTGCG+TGG 0.607353 6.4:+50552226 MS.gene27383:CDS
ATTCATATTCGAGTCAGCCT+GGG 0.607425 6.4:+50549282 MS.gene27383:CDS
CAAGTGTTGTTGCCATTGCG+TGG 0.607532 6.4:-50548486 None:intergenic
AGGGTAGAAATGCAACTTAG+AGG 0.611605 6.4:+50551507 MS.gene27383:CDS
TATAGTTGGGCTGCAACAAG+GGG 0.617263 6.4:+50551720 MS.gene27383:CDS
CTTATAACTCCTTGAACACG+AGG 0.618090 6.4:-50552600 None:intergenic
CGTGGAAAATTGGAGAGCGT+CGG 0.618147 6.4:+50552244 MS.gene27383:CDS
TTCGGTCGCTAGTCAAACCC+TGG 0.621807 6.4:-50552485 None:intergenic
TATTCGAATCAACCACGCAA+TGG 0.622474 6.4:+50548474 MS.gene27383:CDS
GAACAGTCTTCTGAAAGCAA+AGG 0.627118 6.4:+50552337 MS.gene27383:CDS
TTATCAGAAGGGGATGCTTG+TGG 0.631551 6.4:+50552289 MS.gene27383:CDS
ATGACCCCAAGGAACTTGGT+AGG 0.631622 6.4:-50549153 None:intergenic
ATGCAGTTAGATTAGTGCGA+TGG 0.633444 6.4:-50549999 None:intergenic
GTTTAAGAAATACACAACAT+CGG 0.635403 6.4:-50548527 None:intergenic
TGTTATGAACCCTCACGCGA+AGG 0.636579 6.4:+50548233 MS.gene27383:CDS
TATGGATCCAGAGAAGCCAT+AGG 0.636832 6.4:-50547522 None:intergenic
ACGCGAAGGTTGTACAACAA+TGG 0.638155 6.4:+50548247 MS.gene27383:CDS
TTATCCTACCAAGTTCCTTG+GGG 0.643481 6.4:+50549149 MS.gene27383:CDS
AGTAAGATGCTTAACCAATG+TGG 0.646548 6.4:+50552509 MS.gene27383:CDS
ACCAGCATGAACCAACAACA+TGG 0.649692 6.4:-50549345 None:intergenic
ATTTGCTCCTGATGACCCCA+AGG 0.652468 6.4:-50549164 None:intergenic
GAGTGAAAATGCCTCCACAT+TGG 0.657412 6.4:-50552523 None:intergenic
AAGATGCTTAACCAATGTGG+AGG 0.669911 6.4:+50552512 MS.gene27383:CDS
GAGGTCGTGATGTTGAGCAA+TGG 0.676062 6.4:+50551526 MS.gene27383:CDS
AAAATTGGAGAGCGTCGGAG+AGG 0.681877 6.4:+50552249 MS.gene27383:CDS
GGAGACTGACCAATTAGCAG+AGG 0.684915 6.4:-50549253 None:intergenic
CCGATTCTGTCAGAAACACG+TGG 0.688656 6.4:+50547423 MS.gene27383:CDS
ACTCCTGTTAGCCAAATGAG+TGG 0.689485 6.4:+50547600 MS.gene27383:CDS
AGTAAAATTCTCAGTCAGGG+TGG 0.692049 6.4:+50552193 MS.gene27383:CDS
CTTCTCTGGATCCATACGAG+AGG 0.705333 6.4:+50547529 MS.gene27383:CDS
CCGGTCCGCTTCGTACCACG+AGG 0.716834 6.4:+50547574 MS.gene27383:CDS
AGTGGCAGGAAACAAAGTAG+GGG 0.735493 6.4:+50547674 MS.gene27383:CDS
ACTTACGATAGAAACTAGGG+TGG 0.738390 6.4:+50550140 MS.gene27383:CDS
TTATAACTCCTTGAACACGA+GGG 0.753036 6.4:-50552599 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTTAATATTATAAAAAAG+GGG + chr6.4:50550967-50550986 MS.gene27383:intron 10.0%
!!! TTTTATTTTATTTCTAAGTA+AGG - chr6.4:50548414-50548433 None:intergenic 10.0%
!! AAATAAAAGTCTATTACTTT+AGG - chr6.4:50547881-50547900 None:intergenic 15.0%
!! ACAAGAAAATTCAAATAATT+TGG + chr6.4:50550507-50550526 MS.gene27383:intron 15.0%
!! ATGTCTATTTGAAAATAATT+TGG + chr6.4:50550704-50550723 MS.gene27383:intron 15.0%
!! GTATATTTGAATAAAAATTG+TGG + chr6.4:50550669-50550688 MS.gene27383:intron 15.0%
!!! AAAATCAATTTTTGTTATCA+CGG - chr6.4:50551353-50551372 None:intergenic 15.0%
!!! AAATAATGGATTACTTATTA+TGG + chr6.4:50551643-50551662 MS.gene27383:intron 15.0%
!!! ACTATTATATTATTCTGAAA+AGG - chr6.4:50547657-50547676 None:intergenic 15.0%
!!! GTTTAAAATAGTAGTTAATA+AGG + chr6.4:50550789-50550808 MS.gene27383:intron 15.0%
!!! TATCAAGATTTTAAAATGAA+AGG - chr6.4:50551462-50551481 None:intergenic 15.0%
!!! TCAAACTTGTTTAATATAAT+TGG - chr6.4:50552033-50552052 None:intergenic 15.0%
!!! TTTGAAAATAATTTGGATTT+TGG + chr6.4:50550711-50550730 MS.gene27383:intron 15.0%
!!! TTTTCAGAATAATATAATAG+TGG + chr6.4:50547656-50547675 MS.gene27383:CDS 15.0%
!! AAAACACATCTATCAAATAA+TGG + chr6.4:50551629-50551648 MS.gene27383:intron 20.0%
!! AAAATGGTATAAATGTGATT+TGG - chr6.4:50550945-50550964 None:intergenic 20.0%
!! AAATGCAATTGAATCATAAA+AGG - chr6.4:50552693-50552712 None:intergenic 20.0%
!! AATCCACATACTATTTATTA+AGG - chr6.4:50549015-50549034 None:intergenic 20.0%
!! AATGCAATTGAATCATAAAA+GGG - chr6.4:50552692-50552711 None:intergenic 20.0%
!! AATTTGTATAATTACAACTG+AGG - chr6.4:50550231-50550250 None:intergenic 20.0%
!! ATTTCAACATTTGAAAATCA+TGG + chr6.4:50550758-50550777 MS.gene27383:intron 20.0%
!! ATTTGTATAATTACAACTGA+GGG - chr6.4:50550230-50550249 None:intergenic 20.0%
!! TAGAAACATTTACATTCAAA+TGG - chr6.4:50548632-50548651 None:intergenic 20.0%
!! TAGAGTAAGAAGAAAAATAA+CGG - chr6.4:50548318-50548337 None:intergenic 20.0%
!! TATTAACAAATTTGAAGAGA+TGG - chr6.4:50551806-50551825 None:intergenic 20.0%
!! TGAAGATAAACAATGTAAAT+TGG + chr6.4:50550365-50550384 MS.gene27383:intron 20.0%
!! TTAATTCAGTAAATGAATGT+CGG + chr6.4:50549901-50549920 MS.gene27383:intron 20.0%
!! TTTAATGCTTCTGATTTATA+AGG + chr6.4:50549548-50549567 MS.gene27383:intron 20.0%
!! TTTATGATTCAATTGCATTT+CGG + chr6.4:50552693-50552712 MS.gene27383:intron 20.0%
!! TTTATGTTTACGTTAATTGT+TGG + chr6.4:50551295-50551314 MS.gene27383:intron 20.0%
!!! AAAATAATTTGGATTTTGGA+TGG + chr6.4:50550715-50550734 MS.gene27383:intron 20.0%
!!! ATAAAAATGAACACTTGTTA+AGG + chr6.4:50547736-50547755 MS.gene27383:CDS 20.0%
!!! ATTATTTGATAGATGTGTTT+TGG - chr6.4:50551630-50551649 None:intergenic 20.0%
!!! CAAAATGTGAAATTTTAATG+AGG - chr6.4:50549440-50549459 None:intergenic 20.0%
!!! GATTTTGAACAAATCATTTT+TGG + chr6.4:50551367-50551386 MS.gene27383:intron 20.0%
!!! TAATTAACAGCTATTTTCTT+GGG - chr6.4:50548877-50548896 None:intergenic 20.0%
!!! TGGTTTTGATAATAGATATT+AGG - chr6.4:50553090-50553109 None:intergenic 20.0%
!!! TTAAGTCGATTTTATTTATC+TGG + chr6.4:50551861-50551880 MS.gene27383:intron 20.0%
!!! TTGAATGTAAATGTTTCTAA+TGG + chr6.4:50548633-50548652 MS.gene27383:intron 20.0%
!!! TTTATCAGTACTCAAATTTT+TGG + chr6.4:50548566-50548585 MS.gene27383:intron 20.0%
! AAAGTAATGCAAAATGATGT+TGG - chr6.4:50548388-50548407 None:intergenic 25.0%
! AAATATACATCTGAAAATCG+TGG - chr6.4:50550657-50550676 None:intergenic 25.0%
! AAATTATTATGTCAGAGACA+TGG - chr6.4:50553110-50553129 None:intergenic 25.0%
! AATAAGCTCAAAACAACTTA+TGG - chr6.4:50549666-50549685 None:intergenic 25.0%
! AATTGTTATGAGTTCCATAT+TGG - chr6.4:50553027-50553046 None:intergenic 25.0%
! ACTTATTATGGTACAAATGA+TGG + chr6.4:50551655-50551674 MS.gene27383:intron 25.0%
! AGAATGTGTTTATAAGTGAT+GGG - chr6.4:50552779-50552798 None:intergenic 25.0%
! ATATCTTATCTCATCCAATA+TGG + chr6.4:50553010-50553029 MS.gene27383:intron 25.0%
! ATCTGGGAATATATTGTATA+AGG - chr6.4:50549219-50549238 None:intergenic 25.0%
! ATGCCTTAATAAATAGTATG+TGG + chr6.4:50549009-50549028 MS.gene27383:intron 25.0%
! ATGTCTCTGACATAATAATT+TGG + chr6.4:50553109-50553128 MS.gene27383:intron 25.0%
! ATTTATAATGAAATTTGCCC+AGG - chr6.4:50549302-50549321 None:intergenic 25.0%
! GATGGTTAATGAATTTAACA+AGG - chr6.4:50550839-50550858 None:intergenic 25.0%
! GGTAAAAAAATAAAGCTTCA+CGG + chr6.4:50552462-50552481 MS.gene27383:CDS 25.0%
! GTTTAAGAAATACACAACAT+CGG - chr6.4:50548530-50548549 None:intergenic 25.0%
! TAATTCAGTAAATGAATGTC+GGG + chr6.4:50549902-50549921 MS.gene27383:intron 25.0%
! TATGACAATATGTATTCAAG+TGG - chr6.4:50552993-50553012 None:intergenic 25.0%
! TCTATCATTCTATCAATAGA+TGG - chr6.4:50548609-50548628 None:intergenic 25.0%
! TCTGATTTATAAGGTTACAT+CGG + chr6.4:50549557-50549576 MS.gene27383:intron 25.0%
! TGAAGAATTCAAACAATCTT+TGG - chr6.4:50550079-50550098 None:intergenic 25.0%
! TGCAACATATTATCATACTA+TGG - chr6.4:50549803-50549822 None:intergenic 25.0%
! TGCATATGAAAATTAAAACG+AGG - chr6.4:50550916-50550935 None:intergenic 25.0%
! TTTAACACAGTTCAAATACA+TGG + chr6.4:50550533-50550552 MS.gene27383:intron 25.0%
! TTTAAGCTGTTTATCTTCAT+TGG - chr6.4:50550307-50550326 None:intergenic 25.0%
!! AAACCATTTATTTGCCTTTT+AGG - chr6.4:50551068-50551087 None:intergenic 25.0%
!! AACCATTTATTTGCCTTTTA+GGG - chr6.4:50551067-50551086 None:intergenic 25.0%
!! ATTTTTCTTCTTACTCTATG+TGG + chr6.4:50548320-50548339 MS.gene27383:CDS 25.0%
!! GAAAAGTTTTCTACATTTGA+TGG + chr6.4:50547708-50547727 MS.gene27383:CDS 25.0%
!! GGTTAAATACATTTTGTAGA+TGG + chr6.4:50550554-50550573 MS.gene27383:intron 25.0%
!! TGTAATTTTTATTCACCTGT+AGG - chr6.4:50549381-50549400 None:intergenic 25.0%
!! TTTTCTCATTCAACTCTTTA+AGG - chr6.4:50551947-50551966 None:intergenic 25.0%
!!! AATTTCCTTTTTTGCAGTTT+AGG + chr6.4:50548794-50548813 MS.gene27383:intron 25.0%
!!! ACCTTATCTCTTTTTTAAGT+GGG + chr6.4:50552802-50552821 MS.gene27383:intron 25.0%
!!! AGCTTTACTTTTGTTTTCAA+TGG + chr6.4:50548019-50548038 MS.gene27383:intron 25.0%
!!! GTAATTAACAGCTATTTTCT+TGG - chr6.4:50548878-50548897 None:intergenic 25.0%
!!! GTTCTTTTTATTTGAATGCA+AGG - chr6.4:50549476-50549495 None:intergenic 25.0%
!!! TGTGTTATTTTGACACAAAA+TGG + chr6.4:50550483-50550502 MS.gene27383:intron 25.0%
!!! TGTTTGATAATCATTTTGTG+CGG - chr6.4:50553243-50553262 None:intergenic 25.0%
AAACAAGGTTTAGAAGTAAG+AGG + chr6.4:50550460-50550479 MS.gene27383:intron 30.0%
AAACATACAGAACTTTCTTC+AGG + chr6.4:50551239-50551258 MS.gene27383:CDS 30.0%
AAAGATCACATGCGTATAAT+TGG - chr6.4:50551102-50551121 None:intergenic 30.0%
AACCCTAAAAGGCAAATAAA+TGG + chr6.4:50551062-50551081 MS.gene27383:intron 30.0%
AACGACACAACATAACAAAA+GGG + chr6.4:50550337-50550356 MS.gene27383:intron 30.0%
AACGAGGAAAACAATATGAT+TGG - chr6.4:50550900-50550919 None:intergenic 30.0%
ACAATATGTATTCAAGTGGT+GGG - chr6.4:50552989-50553008 None:intergenic 30.0%
AGGCAAAAATCTGAATAATC+TGG - chr6.4:50549236-50549255 None:intergenic 30.0%
ATACAGACGACATACATTAA+AGG + chr6.4:50552169-50552188 MS.gene27383:CDS 30.0%
ATGTATGTAATTACGTTCAG+TGG - chr6.4:50550861-50550880 None:intergenic 30.0%
CAGAATAATATAATAGTGGC+AGG + chr6.4:50547660-50547679 MS.gene27383:CDS 30.0%
CGTTAATTGTATTATGTGCA+TGG - chr6.4:50550614-50550633 None:intergenic 30.0%
CTGATTTATAAGGTTACATC+GGG + chr6.4:50549558-50549577 MS.gene27383:intron 30.0%
GAGAATGTGTTTATAAGTGA+TGG - chr6.4:50552780-50552799 None:intergenic 30.0%
GCACAACTATATGACAAAAA+AGG - chr6.4:50548065-50548084 None:intergenic 30.0%
GCATGTAAATAGCATACTTA+TGG - chr6.4:50553068-50553087 None:intergenic 30.0%
GGCAAAAATCTGAATAATCT+GGG - chr6.4:50549235-50549254 None:intergenic 30.0%
GTGTTCTTAACCTTATAAGA+CGG - chr6.4:50552757-50552776 None:intergenic 30.0%
GTTGTCTAATATCATGTCAA+GGG + chr6.4:50551027-50551046 MS.gene27383:intron 30.0%
TAAATTGCAAAATGCATACC+TGG - chr6.4:50550200-50550219 None:intergenic 30.0%
TAACGACACAACATAACAAA+AGG + chr6.4:50550336-50550355 MS.gene27383:intron 30.0%
TAACTCAACCATTAAAACAC+TGG + chr6.4:50552938-50552957 MS.gene27383:intron 30.0%
TAACTTGAATCAACCCTAAA+AGG + chr6.4:50551051-50551070 MS.gene27383:intron 30.0%
TAATGCAAAATGATGTTGGA+AGG - chr6.4:50548384-50548403 None:intergenic 30.0%
TAGTAGTTAATAAGGTTGAG+TGG + chr6.4:50550797-50550816 MS.gene27383:intron 30.0%
TAGTCTGTGAAAAAGATTAC+AGG + chr6.4:50549083-50549102 MS.gene27383:intron 30.0%
TATTCGCAGCTCAATATTAT+AGG - chr6.4:50550258-50550277 None:intergenic 30.0%
TCAAATAAGTCTTTCCAAAC+AGG - chr6.4:50549584-50549603 None:intergenic 30.0%
TCATAAGTCATAACCAGTTA+TGG + chr6.4:50550424-50550443 MS.gene27383:intron 30.0%
TCCCACTTAAAAAAGAGATA+AGG - chr6.4:50552806-50552825 None:intergenic 30.0%
TGATGATCTAACATTTCTAC+AGG + chr6.4:50552084-50552103 MS.gene27383:intron 30.0%
TGTTGTCTAATATCATGTCA+AGG + chr6.4:50551026-50551045 MS.gene27383:intron 30.0%
TTATAAAAAAGGGGAAGACA+AGG + chr6.4:50550976-50550995 MS.gene27383:intron 30.0%
TTGACGATATGTATTTGACA+CGG + chr6.4:50549046-50549065 MS.gene27383:intron 30.0%
TTGGATAAACAACTTGACAA+GGG - chr6.4:50549774-50549793 None:intergenic 30.0%
TTTAGGAAGAAAGATACCTT+GGG - chr6.4:50547864-50547883 None:intergenic 30.0%
TTTCATTATGTGAAGATGCA+GGG - chr6.4:50549498-50549517 None:intergenic 30.0%
TTTCTTAAACATTCTTCTCC+AGG + chr6.4:50548540-50548559 MS.gene27383:CDS 30.0%
TTTCTTCCTATAAGCAAAGA+GGG - chr6.4:50548682-50548701 None:intergenic 30.0%
TTTGGATAAACAACTTGACA+AGG - chr6.4:50549775-50549794 None:intergenic 30.0%
! AAGTTTTCTTCCATATCCTT+TGG - chr6.4:50548184-50548203 None:intergenic 30.0%
! AATATGTGTATGCACTCTTT+TGG + chr6.4:50550169-50550188 MS.gene27383:CDS 30.0%
! ACAACAATGGAACAAGTTTT+TGG + chr6.4:50548260-50548279 MS.gene27383:CDS 30.0%
! ACCATCTTAGAATTTGAGTT+AGG + chr6.4:50552913-50552932 MS.gene27383:intron 30.0%
! ATATGTGTATGCACTCTTTT+GGG + chr6.4:50550170-50550189 MS.gene27383:CDS 30.0%
! ATTTTATCTCTACTTCCAGA+GGG + chr6.4:50549951-50549970 MS.gene27383:intron 30.0%
! CTTCTGATTTTTATGCTATC+CGG + chr6.4:50549322-50549341 MS.gene27383:CDS 30.0%
! GAAAACTAGTTTCAAGACAA+AGG + chr6.4:50551962-50551981 MS.gene27383:intron 30.0%
! TACATTTTGTAGATGGTTAG+TGG + chr6.4:50550561-50550580 MS.gene27383:intron 30.0%
! TCAAGTTGTTTATCCAAACA+GGG + chr6.4:50549777-50549796 MS.gene27383:intron 30.0%
! TCTTGGTTATTGTGTTTTCA+TGG + chr6.4:50548748-50548767 MS.gene27383:intron 30.0%
! TTTTCTTCCTATAAGCAAAG+AGG - chr6.4:50548683-50548702 None:intergenic 30.0%
!! CTCAAATTCTAAGATGGTAT+CGG - chr6.4:50552911-50552930 None:intergenic 30.0%
!! TGGTTGTTTTGTCTTATGTT+AGG + chr6.4:50553129-50553148 MS.gene27383:intron 30.0%
!! TTGAGTACTGATAAATTACC+TGG - chr6.4:50548561-50548580 None:intergenic 30.0%
!!! AGTGTTTTAATGGTTGAGTT+AGG - chr6.4:50552939-50552958 None:intergenic 30.0%
!!! GACCTTATCTCTTTTTTAAG+TGG + chr6.4:50552801-50552820 MS.gene27383:intron 30.0%
!!! TCATACCTTTTAAGTTCTTC+TGG - chr6.4:50551570-50551589 None:intergenic 30.0%
!!! TCATCTGATGCTTTTTCTTA+TGG + chr6.4:50550096-50550115 MS.gene27383:CDS 30.0%
AACAAACAACATGGAGAGAT+AGG - chr6.4:50548963-50548982 None:intergenic 35.0%
AAGATATATACCTGAGGAAG+AGG - chr6.4:50548940-50548959 None:intergenic 35.0%
AAGCTGTTTATCTTCATTGG+AGG - chr6.4:50550304-50550323 None:intergenic 35.0%
AATACAGCAAATCAGTACTC+TGG + chr6.4:50551122-50551141 MS.gene27383:intron 35.0%
AATTGCGACCAAGCAAAATA+TGG - chr6.4:50548286-50548305 None:intergenic 35.0%
ACAATGTCCATCATAGGATT+GGG + chr6.4:50551189-50551208 MS.gene27383:CDS 35.0%
ACCACTTACGATAGAAACTA+GGG + chr6.4:50550137-50550156 MS.gene27383:CDS 35.0%
ACCTTGGGATCAAATATAGT+GGG - chr6.4:50547849-50547868 None:intergenic 35.0%
ACGACACAACATAACAAAAG+GGG + chr6.4:50550338-50550357 MS.gene27383:intron 35.0%
AGGAAGTAAAATTCTCAGTC+AGG + chr6.4:50552189-50552208 MS.gene27383:CDS 35.0%
AGTAAGATGCTTAACCAATG+TGG + chr6.4:50552509-50552528 MS.gene27383:CDS 35.0%
AGTTAATAAGGTTGAGTGGA+TGG + chr6.4:50550801-50550820 MS.gene27383:intron 35.0%
ATCAAACATTGATGCCATAG+AGG + chr6.4:50553255-50553274 MS.gene27383:CDS 35.0%
ATGTAATTACGTTCAGTGGA+TGG - chr6.4:50550857-50550876 None:intergenic 35.0%
ATTGTCATCATAACGATGCA+TGG + chr6.4:50550037-50550056 MS.gene27383:CDS 35.0%
ATTTATCCTACCAAGTTCCT+TGG + chr6.4:50549147-50549166 MS.gene27383:CDS 35.0%
CAAACCATGTTTAATCGATG+TGG + chr6.4:50552425-50552444 MS.gene27383:intron 35.0%
CAGTTCCACAATTCTCTTTA+TGG + chr6.4:50548153-50548172 MS.gene27383:intron 35.0%
CGTGTCTTGAATCTTAAACA+TGG + chr6.4:50548710-50548729 MS.gene27383:intron 35.0%
CTCTTTACAATGTCCATCAT+AGG + chr6.4:50551183-50551202 MS.gene27383:CDS 35.0%
CTGCATCTTCACATAATGAA+AGG + chr6.4:50549497-50549516 MS.gene27383:intron 35.0%
CTTCTTCAATGTCTTTAGCA+CGG - chr6.4:50552548-50552567 None:intergenic 35.0%
CTTTCATTATGTGAAGATGC+AGG - chr6.4:50549499-50549518 None:intergenic 35.0%
GACAATATGTATTCAAGTGG+TGG - chr6.4:50552990-50553009 None:intergenic 35.0%
GATAGGAAGATATATACCTG+AGG - chr6.4:50548946-50548965 None:intergenic 35.0%
GCTTACCAGAAGAACTTAAA+AGG + chr6.4:50551562-50551581 MS.gene27383:CDS 35.0%
GGAAGTAAAATTCTCAGTCA+GGG + chr6.4:50552190-50552209 MS.gene27383:CDS 35.0%
GGCGCATGAATATAAATGAT+GGG + chr6.4:50552864-50552883 MS.gene27383:intron 35.0%
GTATTTGACACGGAAGAAAA+GGG + chr6.4:50549056-50549075 MS.gene27383:intron 35.0%
GTTTATTGTGCGTGGAAAAT+TGG + chr6.4:50552234-50552253 MS.gene27383:CDS 35.0%
TACAATGTCCATCATAGGAT+TGG + chr6.4:50551188-50551207 MS.gene27383:CDS 35.0%
TACCACTTACGATAGAAACT+AGG + chr6.4:50550136-50550155 MS.gene27383:CDS 35.0%
TACCTTGGGATCAAATATAG+TGG - chr6.4:50547850-50547869 None:intergenic 35.0%
TATTGACACAAAGACAGAAG+GGG - chr6.4:50552653-50552672 None:intergenic 35.0%
TGCTTCAATTTCCATTCCTA+TGG + chr6.4:50547506-50547525 MS.gene27383:CDS 35.0%
TGGTTAAGCATCTTACTGTT+CGG - chr6.4:50552506-50552525 None:intergenic 35.0%
TGTATTTGACACGGAAGAAA+AGG + chr6.4:50549055-50549074 MS.gene27383:intron 35.0%
TTAGGTATGAATCACCTTAC+TGG + chr6.4:50553147-50553166 MS.gene27383:intron 35.0%
TTATAACTCCTTGAACACGA+GGG - chr6.4:50552602-50552621 None:intergenic 35.0%
TTATGTTTCTCCTGAGTCAA+GGG + chr6.4:50548822-50548841 MS.gene27383:CDS 35.0%
TTTATCCTACCAAGTTCCTT+GGG + chr6.4:50549148-50549167 MS.gene27383:CDS 35.0%
! AAGAGAATGACTTGTGTGTT+TGG - chr6.4:50551410-50551429 None:intergenic 35.0%
! AATGAACACTTGTTAAGGTC+TGG + chr6.4:50547741-50547760 MS.gene27383:CDS 35.0%
! AGATTTTTGCCTCTGCTAAT+TGG + chr6.4:50549244-50549263 MS.gene27383:CDS 35.0%
! CATCGATTAAACATGGTTTG+AGG - chr6.4:50552425-50552444 None:intergenic 35.0%
! CATTTTATCTCTACTTCCAG+AGG + chr6.4:50549950-50549969 MS.gene27383:intron 35.0%
! CTCTTTTCGCAAGATATTTG+CGG + chr6.4:50552574-50552593 MS.gene27383:CDS 35.0%
! CTTTAGGAAGAAAGATACCT+TGG - chr6.4:50547865-50547884 None:intergenic 35.0%
! GAAACCACATCGATTAAACA+TGG - chr6.4:50552432-50552451 None:intergenic 35.0%
! GATGGTTAGTGGATATAACA+AGG + chr6.4:50550572-50550591 MS.gene27383:intron 35.0%
! GCATGAATATAAATGATGGG+TGG + chr6.4:50552867-50552886 MS.gene27383:intron 35.0%
! GCCTAACTCAAATTCTAAGA+TGG - chr6.4:50552917-50552936 None:intergenic 35.0%
! GTATTGACACAAAGACAGAA+GGG - chr6.4:50552654-50552673 None:intergenic 35.0%
! GTCAAGTTGTTTATCCAAAC+AGG + chr6.4:50549776-50549795 MS.gene27383:intron 35.0%
! TATGTGTATGCACTCTTTTG+GGG + chr6.4:50550171-50550190 MS.gene27383:CDS 35.0%
! TGGATTTTGGATGGTTATAG+TGG + chr6.4:50550724-50550743 MS.gene27383:intron 35.0%
! TTTTCCAGAACCATTTTCTC+AGG - chr6.4:50551750-50551769 None:intergenic 35.0%
! TTTTCTCATTCGTTTTCTGC+AGG + chr6.4:50548441-50548460 MS.gene27383:intron 35.0%
! TTTTGTTCCATCCTACTTAC+AGG + chr6.4:50551484-50551503 MS.gene27383:intron 35.0%
!! AACAACCAAGCTATTTTGTG+TGG + chr6.4:50551154-50551173 MS.gene27383:CDS 35.0%
!! ACAACCAAGCTATTTTGTGT+GGG + chr6.4:50551155-50551174 MS.gene27383:CDS 35.0%
!! AGTATTGACACAAAGACAGA+AGG - chr6.4:50552655-50552674 None:intergenic 35.0%
!! CATATAATGGACCACTCATT+TGG - chr6.4:50547614-50547633 None:intergenic 35.0%
!! CATTAAAACACTGGCTTGAT+AGG + chr6.4:50552947-50552966 MS.gene27383:intron 35.0%
!! CTATCAAGCCAGTGTTTTAA+TGG - chr6.4:50552949-50552968 None:intergenic 35.0%
!! GTTTTCTACATTTGATGGCA+CGG + chr6.4:50547713-50547732 MS.gene27383:CDS 35.0%
!! TAACAGCTATTTTCTTGGGA+TGG - chr6.4:50548873-50548892 None:intergenic 35.0%
!! TGAGCAACTTTGAAGTAAGT+GGG - chr6.4:50547807-50547826 None:intergenic 35.0%
!!! AATTTTTTCCCATATGGCTG+AGG + chr6.4:50552111-50552130 MS.gene27383:CDS 35.0%
!!! GGTTCGAATTTTTTCCCATA+TGG + chr6.4:50552105-50552124 MS.gene27383:intron 35.0%
!!! GTTTTTGGCCATATTTTGCT+TGG + chr6.4:50548275-50548294 MS.gene27383:CDS 35.0%
!!! TCCTTTTTTGCAGTTTAGGT+TGG + chr6.4:50548798-50548817 MS.gene27383:intron 35.0%
!!! TCTCTTTTTTAAGTGGGACT+TGG + chr6.4:50552808-50552827 MS.gene27383:intron 35.0%
AAAAATAAAGCTTCACGGCC+AGG + chr6.4:50552467-50552486 MS.gene27383:CDS 40.0%
AAAATAAAGCTTCACGGCCA+GGG + chr6.4:50552468-50552487 MS.gene27383:CDS 40.0%
AACCAGTTATGGTTGACGAT+AGG + chr6.4:50550435-50550454 MS.gene27383:intron 40.0%
AAGATGCTTAACCAATGTGG+AGG + chr6.4:50552512-50552531 MS.gene27383:CDS 40.0%
AAGATGGTGTTTATTGTGCG+TGG + chr6.4:50552226-50552245 MS.gene27383:CDS 40.0%
ACAATAGATTCGGGCGTATT+AGG - chr6.4:50552840-50552859 None:intergenic 40.0%
ACCCTAGTTTCTATCGTAAG+TGG - chr6.4:50550141-50550160 None:intergenic 40.0%
ACTTACGATAGAAACTAGGG+TGG + chr6.4:50550140-50550159 MS.gene27383:CDS 40.0%
ACTTCCCACACAAAATAGCT+TGG - chr6.4:50551162-50551181 None:intergenic 40.0%
AGACTGTTTGGAAGAGCTTA+TGG + chr6.4:50549631-50549650 MS.gene27383:intron 40.0%
AGAGGGTTAACCAATGTTTG+CGG + chr6.4:50549968-50549987 MS.gene27383:intron 40.0%
AGGGTAGAAATGCAACTTAG+AGG + chr6.4:50551507-50551526 MS.gene27383:CDS 40.0%
AGTAAAATTCTCAGTCAGGG+TGG + chr6.4:50552193-50552212 MS.gene27383:CDS 40.0%
ATAGTGGCAGGAAACAAAGT+AGG + chr6.4:50547672-50547691 MS.gene27383:CDS 40.0%
ATGCAGTTAGATTAGTGCGA+TGG - chr6.4:50550002-50550021 None:intergenic 40.0%
ATTCATATTCGAGTCAGCCT+GGG + chr6.4:50549282-50549301 MS.gene27383:CDS 40.0%
ATTTCTACCCTCCTGTAAGT+AGG - chr6.4:50551498-50551517 None:intergenic 40.0%
CCAAGAATCTTCTACGTCTA+GGG + chr6.4:50549191-50549210 MS.gene27383:CDS 40.0%
CCTCGAAATGTTTCTTCTGA+AGG - chr6.4:50547478-50547497 None:intergenic 40.0%
CCTTCAGAAGAAACATTTCG+AGG + chr6.4:50547475-50547494 MS.gene27383:CDS 40.0%
CGGCGCATGAATATAAATGA+TGG + chr6.4:50552863-50552882 MS.gene27383:intron 40.0%
CGTCACCATAAAGAGAATTG+TGG - chr6.4:50548161-50548180 None:intergenic 40.0%
CTATAAGCAAAGAGGGACTA+AGG - chr6.4:50548675-50548694 None:intergenic 40.0%
CTCGTGTTCAAGGAGTTATA+AGG + chr6.4:50552601-50552620 MS.gene27383:CDS 40.0%
CTTAGTCCCTCTTTGCTTAT+AGG + chr6.4:50548673-50548692 MS.gene27383:intron 40.0%
CTTATAACTCCTTGAACACG+AGG - chr6.4:50552603-50552622 None:intergenic 40.0%
CTTATGTTTCTCCTGAGTCA+AGG + chr6.4:50548821-50548840 MS.gene27383:CDS 40.0%
CTTCTTACTCTATGTGGAGA+AGG + chr6.4:50548326-50548345 MS.gene27383:CDS 40.0%
CTTTGCAGCAAACAGAATTC+AGG + chr6.4:50553175-50553194 MS.gene27383:CDS 40.0%
GAAGAAACATTTCGAGGACA+CGG + chr6.4:50547481-50547500 MS.gene27383:CDS 40.0%
GACTCGAATATGAATCCAGT+TGG - chr6.4:50549277-50549296 None:intergenic 40.0%
GATGGGTGGTTCAAATCAAT+AGG + chr6.4:50552881-50552900 MS.gene27383:intron 40.0%
GCCAACCTAAACTGCAAAAA+AGG - chr6.4:50548802-50548821 None:intergenic 40.0%
GCTGTTTGCATAAGCAATCA+TGG - chr6.4:50549701-50549720 None:intergenic 40.0%
GGTTGACGATAGGAAAAACA+AGG + chr6.4:50550445-50550464 MS.gene27383:intron 40.0%
GTGGGACAAGTAGTACAATA+AGG - chr6.4:50547789-50547808 None:intergenic 40.0%
TAACCACTTGTGAGACTGTT+TGG + chr6.4:50549619-50549638 MS.gene27383:intron 40.0%
TAGTGGCAGGAAACAAAGTA+GGG + chr6.4:50547673-50547692 MS.gene27383:CDS 40.0%
TATCATACTATGGCCCTGTT+TGG - chr6.4:50549793-50549812 None:intergenic 40.0%
TATTCGAATCAACCACGCAA+TGG + chr6.4:50548474-50548493 MS.gene27383:CDS 40.0%
TCCCACTATATTTGATCCCA+AGG + chr6.4:50547845-50547864 MS.gene27383:CDS 40.0%
TGAAAAGGATTTCCAGTTGC+AGG - chr6.4:50547642-50547661 None:intergenic 40.0%
TGTTCCTGAGAAAATGGTTC+TGG + chr6.4:50551743-50551762 MS.gene27383:CDS 40.0%
TTATATGCTTCTCCTGCAAC+TGG + chr6.4:50547627-50547646 MS.gene27383:CDS 40.0%
TTATCCTACCAAGTTCCTTG+GGG + chr6.4:50549149-50549168 MS.gene27383:CDS 40.0%
TTCCTATCGTCAACCATAAC+TGG - chr6.4:50550440-50550459 None:intergenic 40.0%
TTCTGCTCTTCATGTATTCC+TGG + chr6.4:50548210-50548229 MS.gene27383:CDS 40.0%
TTGTTAAGGTCTGGACAACT+AGG + chr6.4:50547750-50547769 MS.gene27383:CDS 40.0%
! AACGGTGTCAACAAACAACA+TGG - chr6.4:50548972-50548991 None:intergenic 40.0%
! CTGAATTCTGTTTGCTGCAA+AGG - chr6.4:50553177-50553196 None:intergenic 40.0%
! CTGTATTAGTCTCTCACGAA+TGG - chr6.4:50552155-50552174 None:intergenic 40.0%
! CTTCTGAAGGTAGAATCTTG+AGG - chr6.4:50547465-50547484 None:intergenic 40.0%
! GAACAGTCTTCTGAAAGCAA+AGG + chr6.4:50552337-50552356 MS.gene27383:CDS 40.0%
! GACTTGTGTGTTTGGTTTCA+CGG - chr6.4:50551402-50551421 None:intergenic 40.0%
! GATTGCGACAACTTCTTTTG+AGG - chr6.4:50552393-50552412 None:intergenic 40.0%
! GTGGTGAAGAACTTCTAAGA+TGG + chr6.4:50552308-50552327 MS.gene27383:CDS 40.0%
! GTTGCAGGAGAAGCATATAA+TGG - chr6.4:50547627-50547646 None:intergenic 40.0%
! TCAAATATAGTGGGAGCTCT+TGG - chr6.4:50547840-50547859 None:intergenic 40.0%
!! AAAACACTGGCTTGATAGGT+GGG + chr6.4:50552951-50552970 MS.gene27383:intron 40.0%
!! CAAACAGAATTCAGGTTGCA+TGG + chr6.4:50553183-50553202 MS.gene27383:CDS 40.0%
!! CTCTCGTGCAAAAGTTGATA+TGG + chr6.4:50550396-50550415 MS.gene27383:intron 40.0%
!! CTGAGCAACTTTGAAGTAAG+TGG - chr6.4:50547808-50547827 None:intergenic 40.0%
!! TAAAACACTGGCTTGATAGG+TGG + chr6.4:50552950-50552969 MS.gene27383:intron 40.0%
!! TGCATTTCGGTGTTGTGTTT+GGG + chr6.4:50552706-50552725 MS.gene27383:intron 40.0%
!! TGGATATAACAAGGTGTTGC+AGG + chr6.4:50550581-50550600 MS.gene27383:intron 40.0%
!! TTGCATTTCGGTGTTGTGTT+TGG + chr6.4:50552705-50552724 MS.gene27383:intron 40.0%
!!! TTGCTTTTTGCGCTTCTCAT+TGG + chr6.4:50551216-50551235 MS.gene27383:CDS 40.0%
AAGCAATCATGGAGAGCTCA+TGG - chr6.4:50549690-50549709 None:intergenic 45.0%
ACACAAAGACAGAAGGGGAA+TGG - chr6.4:50552648-50552667 None:intergenic 45.0%
ACCAGCATGAACCAACAACA+TGG - chr6.4:50549348-50549367 None:intergenic 45.0%
ACCTTATAAGACGGCTCTGT+AGG - chr6.4:50552748-50552767 None:intergenic 45.0%
ACGCCCGAATCTATTGTACT+CGG + chr6.4:50552843-50552862 MS.gene27383:intron 45.0%
ACGCGAAGGTTGTACAACAA+TGG + chr6.4:50548247-50548266 MS.gene27383:CDS 45.0%
ACTCCTGTTAGCCAAATGAG+TGG + chr6.4:50547600-50547619 MS.gene27383:CDS 45.0%
ACTTTCTTCAGGCTCTTGGA+CGG + chr6.4:50551250-50551269 MS.gene27383:CDS 45.0%
AGTGGCAGGAAACAAAGTAG+GGG + chr6.4:50547674-50547693 MS.gene27383:CDS 45.0%
AGTTAGATTAGTGCGATGGC+AGG - chr6.4:50549998-50550017 None:intergenic 45.0%
ATCCAGAGAAGCCATAGGAA+TGG - chr6.4:50547520-50547539 None:intergenic 45.0%
ATGTCTGTCTGGAGATCTTC+TGG - chr6.4:50551777-50551796 None:intergenic 45.0%
ATTCCGGTTCCGTTATCAGA+AGG + chr6.4:50552277-50552296 MS.gene27383:CDS 45.0%
CAAGAGTCCCAATCCTATGA+TGG - chr6.4:50551199-50551218 None:intergenic 45.0%
CAAGCATCCCCTTCTGATAA+CGG - chr6.4:50552289-50552308 None:intergenic 45.0%
CACAAAGACAGAAGGGGAAT+GGG - chr6.4:50552647-50552666 None:intergenic 45.0%
CAGAACTTTCTTCAGGCTCT+TGG + chr6.4:50551246-50551265 MS.gene27383:CDS 45.0%
CCCTAGACGTAGAAGATTCT+TGG - chr6.4:50549194-50549213 None:intergenic 45.0%
CCTTATAAGACGGCTCTGTA+GGG - chr6.4:50552747-50552766 None:intergenic 45.0%
CTAATTGGTCAGTCTCCAAC+TGG + chr6.4:50549259-50549278 MS.gene27383:CDS 45.0%
CTTCCAAACAGTCTCACAAG+TGG - chr6.4:50549625-50549644 None:intergenic 45.0%
GAGGGTTAACCAATGTTTGC+GGG + chr6.4:50549969-50549988 MS.gene27383:intron 45.0%
GAGTGAAAATGCCTCCACAT+TGG - chr6.4:50552526-50552545 None:intergenic 45.0%
GATGTGGTTTCTCTTGCAGA+AGG + chr6.4:50552441-50552460 MS.gene27383:intron 45.0%
GATTCATATTCGAGTCAGCC+TGG + chr6.4:50549281-50549300 MS.gene27383:CDS 45.0%
GCCAAGAATCTTCTACGTCT+AGG + chr6.4:50549190-50549209 MS.gene27383:CDS 45.0%
GCTGCAAAGGATTTCCAGTA+AGG - chr6.4:50553164-50553183 None:intergenic 45.0%
GGTTCATGCTGGTATCTCTT+TGG + chr6.4:50549355-50549374 MS.gene27383:CDS 45.0%
GTATAGTTGGGCTGCAACAA+GGG + chr6.4:50551719-50551738 MS.gene27383:CDS 45.0%
GTTCCATCCTACTTACAGGA+GGG + chr6.4:50551488-50551507 MS.gene27383:intron 45.0%
TATAGTTGGGCTGCAACAAG+GGG + chr6.4:50551720-50551739 MS.gene27383:CDS 45.0%
TATGGATCCAGAGAAGCCAT+AGG - chr6.4:50547525-50547544 None:intergenic 45.0%
TCAACACAACACCGAGGTAA+CGG - chr6.4:50548990-50549009 None:intergenic 45.0%
TGCGCCGAGTACAATAGATT+CGG - chr6.4:50552850-50552869 None:intergenic 45.0%
TGTTCCATCCTACTTACAGG+AGG + chr6.4:50551487-50551506 MS.gene27383:intron 45.0%
TTATCAGAAGGGGATGCTTG+TGG + chr6.4:50552289-50552308 MS.gene27383:CDS 45.0%
TTCCATTCCTATGGCTTCTC+TGG + chr6.4:50547515-50547534 MS.gene27383:CDS 45.0%
TTCCGGTTCCGTTATCAGAA+GGG + chr6.4:50552278-50552297 MS.gene27383:CDS 45.0%
! CACGAATGGCGTCTAAGATA+GGG - chr6.4:50552141-50552160 None:intergenic 45.0%
! CCACGTGTTTCTGACAGAAT+CGG - chr6.4:50547426-50547445 None:intergenic 45.0%
! GCAAACATTGGTTAACCCTC+TGG - chr6.4:50549969-50549988 None:intergenic 45.0%
! GTTTGTTGACACCGTTACCT+CGG + chr6.4:50548976-50548995 MS.gene27383:intron 45.0%
! TATGGTGACGCCAAAGGATA+TGG + chr6.4:50548171-50548190 MS.gene27383:CDS 45.0%
! TCACGAATGGCGTCTAAGAT+AGG - chr6.4:50552142-50552161 None:intergenic 45.0%
! TCTCTTTATGGTGACGCCAA+AGG + chr6.4:50548165-50548184 MS.gene27383:CDS 45.0%
! TGTGTGTTTGGTTTCACGGT+AGG - chr6.4:50551398-50551417 None:intergenic 45.0%
!! AAGGGGTGTTCCTGAGAAAA+TGG + chr6.4:50551737-50551756 MS.gene27383:CDS 45.0%
!! TTCAGGTTGCATGGAGATAC+AGG + chr6.4:50553192-50553211 MS.gene27383:CDS 45.0%
!! TTCGGTGTTGTGTTTGGGTT+GGG + chr6.4:50552711-50552730 MS.gene27383:intron 45.0%
!! TTTCGGTGTTGTGTTTGGGT+TGG + chr6.4:50552710-50552729 MS.gene27383:intron 45.0%
!! AACATTTAATATTATAAAAA+AGG + chr6.4:50550965-50550984 MS.gene27383:intron 5.0%
!! ACATTTAATATTATAAAAAA+GGG + chr6.4:50550966-50550985 MS.gene27383:intron 5.0%
!! TATAATATTAAATGTTAAAA+TGG - chr6.4:50550961-50550980 None:intergenic 5.0%
!!! AATTTTATTTAAAACATTAT+AGG - chr6.4:50551917-50551936 None:intergenic 5.0%
!!! TAAATTATATTTTTAAAAGA+AGG - chr6.4:50547968-50547987 None:intergenic 5.0%
AAGACAGAAGGGGAATGGGA+TGG - chr6.4:50552643-50552662 None:intergenic 50.0%
AAGGTTACATCGGGCCTGTT+TGG + chr6.4:50549567-50549586 MS.gene27383:intron 50.0%
AGGGTCATCCTCAGCCATAT+GGG - chr6.4:50552122-50552141 None:intergenic 50.0%
ATGACCCCAAGGAACTTGGT+AGG - chr6.4:50549156-50549175 None:intergenic 50.0%
ATGCTATCCGGCCATGTTGT+TGG + chr6.4:50549334-50549353 MS.gene27383:CDS 50.0%
ATTTGCTCCTGATGACCCCA+AGG - chr6.4:50549167-50549186 None:intergenic 50.0%
CAGCAAATCAGTACTCTGGC+TGG + chr6.4:50551126-50551145 MS.gene27383:intron 50.0%
CCCTACAGAGCCGTCTTATA+AGG + chr6.4:50552744-50552763 MS.gene27383:intron 50.0%
CCGAATCTTGTCGGACATAC+CGG + chr6.4:50547555-50547574 MS.gene27383:CDS 50.0%
CCGATTCTGTCAGAAACACG+TGG + chr6.4:50547423-50547442 MS.gene27383:CDS 50.0%
CCGGTATGTCCGACAAGATT+CGG - chr6.4:50547558-50547577 None:intergenic 50.0%
CTACCCTCCTGTAAGTAGGA+TGG - chr6.4:50551494-50551513 None:intergenic 50.0%
CTGGTATCTCTTTGGCCTAC+AGG + chr6.4:50549363-50549382 MS.gene27383:CDS 50.0%
CTTCTCTGGATCCATACGAG+AGG + chr6.4:50547529-50547548 MS.gene27383:CDS 50.0%
GAGAGGCAACCGAATCTTGT+CGG + chr6.4:50547546-50547565 MS.gene27383:CDS 50.0%
GAGGTCGTGATGTTGAGCAA+TGG + chr6.4:50551526-50551545 MS.gene27383:CDS 50.0%
GATGGCGTCTTATGTCTGTC+TGG - chr6.4:50551788-50551807 None:intergenic 50.0%
GCAGGCTGAACGGTATAGTT+GGG + chr6.4:50551707-50551726 MS.gene27383:CDS 50.0%
GCATGAACCAACAACATGGC+CGG - chr6.4:50549344-50549363 None:intergenic 50.0%
GCGCCGAGTACAATAGATTC+GGG - chr6.4:50552849-50552868 None:intergenic 50.0%
GGACCACTCATTTGGCTAAC+AGG - chr6.4:50547606-50547625 None:intergenic 50.0%
GGAGACTGACCAATTAGCAG+AGG - chr6.4:50549256-50549275 None:intergenic 50.0%
GGCTGTCGAGCATTATGTCT+TGG + chr6.4:50548731-50548750 MS.gene27383:intron 50.0%
GGTATAGTTGGGCTGCAACA+AGG + chr6.4:50551718-50551737 MS.gene27383:CDS 50.0%
GTTCTTCTGGTAAGCGACGA+TGG - chr6.4:50551557-50551576 None:intergenic 50.0%
GTTGTACAACCTTCGCGTGA+GGG - chr6.4:50548245-50548264 None:intergenic 50.0%
TAGGGTCATCCTCAGCCATA+TGG - chr6.4:50552123-50552142 None:intergenic 50.0%
TCATAACGATGCATGGAGCC+AGG + chr6.4:50550044-50550063 MS.gene27383:CDS 50.0%
TCCGGTTCCGTTATCAGAAG+GGG + chr6.4:50552279-50552298 MS.gene27383:CDS 50.0%
TCTCCTGAGTCAAGGGTTGT+TGG + chr6.4:50548829-50548848 MS.gene27383:CDS 50.0%
TGTTATGAACCCTCACGCGA+AGG + chr6.4:50548233-50548252 MS.gene27383:CDS 50.0%
TGTTGTACAACCTTCGCGTG+AGG - chr6.4:50548246-50548265 None:intergenic 50.0%
TGTTGTATCGCCTCTTCCTC+AGG + chr6.4:50548927-50548946 MS.gene27383:CDS 50.0%
! AAGGCATCAACACAACACCG+AGG - chr6.4:50548996-50549015 None:intergenic 50.0%
! AGATTCGGTTGCCTCTCGTA+TGG - chr6.4:50547543-50547562 None:intergenic 50.0%
! AGTCAAGGGTTGTTGGTGCT+GGG + chr6.4:50548836-50548855 MS.gene27383:CDS 50.0%
! CAAGTGTTGTTGCCATTGCG+TGG - chr6.4:50548489-50548508 None:intergenic 50.0%
! CGTGGAAAATTGGAGAGCGT+CGG + chr6.4:50552244-50552263 MS.gene27383:CDS 50.0%
! GCTAACAGGAGTTTTCCTCG+TGG - chr6.4:50547592-50547611 None:intergenic 50.0%
! GTTTTCCTCGTGGTACGAAG+CGG - chr6.4:50547582-50547601 None:intergenic 50.0%
!! AAAATTGGAGAGCGTCGGAG+AGG + chr6.4:50552249-50552268 MS.gene27383:CDS 50.0%
!! GCCATGTTGTTGGTTCATGC+TGG + chr6.4:50549344-50549363 MS.gene27383:CDS 50.0%
!! GGGTGGTCTTGTACAGAAGA+TGG + chr6.4:50552210-50552229 MS.gene27383:CDS 50.0%
!! TCCCCTTCTGATAACGGAAC+CGG - chr6.4:50552283-50552302 None:intergenic 50.0%
!! TGCACTCTTTTGGGGATTCC+AGG + chr6.4:50550179-50550198 MS.gene27383:CDS 50.0%
AATCTTTGGCGCCCTGATCC+TGG - chr6.4:50550065-50550084 None:intergenic 55.0%
CCAAGTTCCTTGGGGTCATC+AGG + chr6.4:50549157-50549176 MS.gene27383:CDS 55.0%
CCTGATGACCCCAAGGAACT+TGG - chr6.4:50549160-50549179 None:intergenic 55.0%
CGTCGGAGAGGATGGAATTC+CGG + chr6.4:50552261-50552280 MS.gene27383:CDS 55.0%
GAGTCAAGGGTTGTTGGTGC+TGG + chr6.4:50548835-50548854 MS.gene27383:CDS 55.0%
GATGCATGGAGCCAGGATCA+GGG + chr6.4:50550051-50550070 MS.gene27383:CDS 55.0%
GCACCAACAACCCTTGACTC+AGG - chr6.4:50548835-50548854 None:intergenic 55.0%
GCGTGAGGGTTCATAACACC+AGG - chr6.4:50548231-50548250 None:intergenic 55.0%
GGCAGGCTGAACGGTATAGT+TGG + chr6.4:50551706-50551725 MS.gene27383:CDS 55.0%
TCTTGGACGGAGGTAGAGCA+TGG + chr6.4:50551263-50551282 MS.gene27383:intron 55.0%
TTCGGTCGCTAGTCAAACCC+TGG - chr6.4:50552488-50552507 None:intergenic 55.0%
TTCTTCAGGCTCTTGGACGG+AGG + chr6.4:50551253-50551272 MS.gene27383:CDS 55.0%
!! GTCAAGGGTTGTTGGTGCTG+GGG + chr6.4:50548837-50548856 MS.gene27383:CDS 55.0%
CGATGCATGGAGCCAGGATC+AGG + chr6.4:50550050-50550069 MS.gene27383:CDS 60.0%
GGCAGGCATCCCGCAAACAT+TGG - chr6.4:50549981-50550000 None:intergenic 60.0%
TTGCGGAGCCCTCGTGTTCA+AGG + chr6.4:50552591-50552610 MS.gene27383:CDS 60.0%
!! TTGGAGAGCGTCGGAGAGGA+TGG + chr6.4:50552253-50552272 MS.gene27383:CDS 60.0%
CCTCGTGGTACGAAGCGGAC+CGG - chr6.4:50547577-50547596 None:intergenic 65.0%
! GGAGAGTGCGGCAGGCTGAA+CGG + chr6.4:50551697-50551716 MS.gene27383:intron 65.0%
CCGGTCCGCTTCGTACCACG+AGG + chr6.4:50547574-50547593 MS.gene27383:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 50547396 50553274 50547396 ID=MS.gene27383
chr6.4 mRNA 50547396 50553274 50547396 ID=MS.gene27383.t1;Parent=MS.gene27383
chr6.4 exon 50547396 50547866 50547396 ID=MS.gene27383.t1.exon1;Parent=MS.gene27383.t1
chr6.4 CDS 50547396 50547866 50547396 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50548156 50548347 50548156 ID=MS.gene27383.t1.exon2;Parent=MS.gene27383.t1
chr6.4 CDS 50548156 50548347 50548156 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50548463 50548561 50548463 ID=MS.gene27383.t1.exon3;Parent=MS.gene27383.t1
chr6.4 CDS 50548463 50548561 50548463 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50548811 50548948 50548811 ID=MS.gene27383.t1.exon4;Parent=MS.gene27383.t1
chr6.4 CDS 50548811 50548948 50548811 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50549136 50549384 50549136 ID=MS.gene27383.t1.exon5;Parent=MS.gene27383.t1
chr6.4 CDS 50549136 50549384 50549136 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50549970 50550200 50549970 ID=MS.gene27383.t1.exon6;Parent=MS.gene27383.t1
chr6.4 CDS 50549970 50550200 50549970 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50551129 50551274 50551129 ID=MS.gene27383.t1.exon7;Parent=MS.gene27383.t1
chr6.4 CDS 50551129 50551274 50551129 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50551506 50551583 50551506 ID=MS.gene27383.t1.exon8;Parent=MS.gene27383.t1
chr6.4 CDS 50551506 50551583 50551506 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50551698 50551827 50551698 ID=MS.gene27383.t1.exon9;Parent=MS.gene27383.t1
chr6.4 CDS 50551698 50551827 50551698 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50552106 50552358 50552106 ID=MS.gene27383.t1.exon10;Parent=MS.gene27383.t1
chr6.4 CDS 50552106 50552358 50552106 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50552460 50552622 50552460 ID=MS.gene27383.t1.exon11;Parent=MS.gene27383.t1
chr6.4 CDS 50552460 50552622 50552460 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
chr6.4 exon 50553151 50553274 50553151 ID=MS.gene27383.t1.exon12;Parent=MS.gene27383.t1
chr6.4 CDS 50553151 50553274 50553151 ID=cds.MS.gene27383.t1;Parent=MS.gene27383.t1
Gene Sequence

>MS.gene27383

ATGAATCATTTTGATAAAGATGAAATTCCGATTCTGTCAGAAACACGTGGACAACGATCTGATGAACCTCAAGATTCTACCTTCAGAAGAAACATTTCGAGGACACGGAGTGCTTCAATTTCCATTCCTATGGCTTCTCTGGATCCATACGAGAGGCAACCGAATCTTGTCGGACATACCGGTCCGCTTCGTACCACGAGGAAAACTCCTGTTAGCCAAATGAGTGGTCCATTATATGCTTCTCCTGCAACTGGAAATCCTTTTCAGAATAATATAATAGTGGCAGGAAACAAAGTAGGGGAGAACAAGACAGAAAAGTTTTCTACATTTGATGGCACGGATAAAAATGAACACTTGTTAAGGTCTGGACAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGTCCCACTTACTTCAAAGTTGCTCAGCAAAGAAAACCAAGAGCTCCCACTATATTTGATCCCAAGGTATCTTTCTTCCTAAAGTAATAGACTTTTATTTCTTCATAAATTTAAGAAAAGACTGACTTCTATGTTTTGAAATTGACTTCATGACGATGATTCTGCCTTCTTTTAAAAATATAATTTATAGATATCTGATGATTTTCATATTAATAGATAGCTTTACTTTTGTTTTCAATGGCAATTACTATGATGAATGCGCCTTTTTTGTCATATAGTTGTGCACATTTTGTTTGTGTTTGCTGTTACTTTCACATAAACAATCATACATTTTTCATGTTTTGAATGTTTACAGTTCCACAATTCTCTTTATGGTGACGCCAAAGGATATGGAAGAAAACTTTTTTCTTTCTGCTCTTCATGTATTCCTGGTGTTATGAACCCTCACGCGAAGGTTGTACAACAATGGAACAAGTTTTTGGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCGTTATTTTTCTTCTTACTCTATGTGGAGAAGGTATGATTCTTTTTATTTTATTTAAGTTTAAAACCTTCCAACATCATTTTGCATTACTTTTTTCCTTACTTAGAAATAAAATAAAACTTCACTTTTTCTCATTCGTTTTCTGCAGGATAATAAATGTATTCGAATCAACCACGCAATGGCAACAACACTTGTTGTACTTAGAAGCGTAACCGATGTTGTGTATTTCTTAAACATTCTTCTCCAGGTAATTTATCAGTACTCAAATTTTTGGATTTAATATTTGCTAATCCATCTATTGATAGAATGATAGACCATTTGAATGTAAATGTTTCTAATGGTTGATCTTATAAATTTCCTTAGTCCCTCTTTGCTTATAGGAAGAAAAAAGTGCACGTGTCTTGAATCTTAAACATGGCTGTCGAGCATTATGTCTTGGTTATTGTGTTTTCATGGTTTAAAGATTATATAACTCTATCAATTTCCTTTTTTGCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTTGTTGGTGCTGGGGATTTAGTTGACCATCCCAAGAAAATAGCTGTTAATTACTTTAAGAGCTACTTTCTCTTCGACTTATTTGTTGTATCGCCTCTTCCTCAGGTATATATCTTCCTATCTCTCCATGTTGTTTGTTGACACCGTTACCTCGGTGTTGTGTTGATGCCTTAATAAATAGTATGTGGATTTGAAAAAGTGCTTGACGATATGTATTTGACACGGAAGAAAAGGGATTTTAGTCTGTGAAAAAGATTACAGGTTTATGATGTATGTTGTGAAATATTTGCAGATAATGATAATATTTATCCTACCAAGTTCCTTGGGGTCATCAGGAGCAAATTATGCCAAGAATCTTCTACGTCTAGGGATCCTTATACAATATATTCCCAGATTATTCAGATTTTTGCCTCTGCTAATTGGTCAGTCTCCAACTGGATTCATATTCGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTGATTTTTATGCTATCCGGCCATGTTGTTGGTTCATGCTGGTATCTCTTTGGCCTACAGGTGAATAAAAATTACATTTGAAGCTTCATTCTCAAAAAATAAAAAATTTCTTCCTCATTAAAATTTCACATTTTGCTTTAAATTCTCACCTTGCATTCAAATAAAAAGAACCCTGCATCTTCACATAATGAAAGGAAAAAGAAAAAAATATTAATTGATTCACTTTAATGCTTCTGATTTATAAGGTTACATCGGGCCTGTTTGGAAAGACTTATTTGAGATTAGATATTGATATAACCACTTGTGAGACTGTTTGGAAGAGCTTATGGAAACAACTTCCATAAGTTGTTTTGAGCTTATTTCCATGAGCTCTCCATGATTGCTTATGCAAACAGCTTATAGCTTATATGAAAACAATCTGCATTTATTTTATATTTTATCATAAGCCCTTGTCAAGTTGTTTATCCAAACAGGGCCATAGTATGATAATATGTTGCAAGAATTACAATAAAAATTAAGCGTTATTAAGTTTTGTTGAATGCTTTAAATAAGAATTGTTCAATTAGAATCAATAATTTAATTCAGTAAATGAATGTCGGGTAAATTTCAATTTACTAACTTCTCTCATTTTATCTCTACTTCCAGAGGGTTAACCAATGTTTGCGGGATGCCTGCCATCGCACTAATCTAACTGCATGCATGAAATTGATTGATTGTCATCATAACGATGCATGGAGCCAGGATCAGGGCGCCAAAGATTGTTTGAATTCTTCATCTGATGCTTTTTCTTATGGAATTTATAACGCTGCTGTACCACTTACGATAGAAACTAGGGTGGTCAACAAATATGTGTATGCACTCTTTTGGGGATTCCAGGTATGCATTTTGCAATTTATTTTCTTCCCTCAGTTGTAATTATACAAATTTTGTCCTATAATATTGAGCTGCGAATATTCGAATTTGCTTAATATATGAGCCTCCAATGAAGATAAACAGCTTAAAGTATCTTTTTAACGACACAACATAACAAAAGGGGACTATGAAGATAAACAATGTAAATTGGTATGAAAACTCTCGTGCAAAAGTTGATATGGATGTCTCATAAGTCATAACCAGTTATGGTTGACGATAGGAAAAACAAGGTTTAGAAGTAAGAGGTGTGTTATTTTGACACAAAATGGAACAAGAAAATTCAAATAATTTGGTAATTTAACACAGTTCAAATACATGGTTAAATACATTTTGTAGATGGTTAGTGGATATAACAAGGTGTTGCAGGTCATTAGCCATGCACATAATACAATTAACGACAATTTTTAATGTTATTGACCACGATTTTCAGATGTATATTTGAATAAAAATTGTGGTTAATAGATATTATGTCTATTTGAAAATAATTTGGATTTTGGATGGTTATAGTGGATATCATGTGTATTTCAACATTTGAAAATCATGGTTAATGACGTTTAAAATAGTAGTTAATAAGGTTGAGTGGATGGTGAGTTGTGACACCTTGTTAAATTCATTAACCATCCACTGAACGTAATTACATACATATTTGAATTATGTTAACCAATCATATTGTTTTCCTCGTTTTAATTTTCATATGCAGTTTCACCAAATCACATTTATACCATTTTAACATTTAATATTATAAAAAAGGGGAAGACAAGGATTGAACTTTGAAAAAAACGATCAAAATGTTGTCTAATATCATGTCAAGGGCTAACTTGAATCAACCCTAAAAGGCAAATAAATGGTTTGATATTACTTACCAATTATACGCATGTGATCTTTAATACAGCAAATCAGTACTCTGGCTGGTAATCAACAACCAAGCTATTTTGTGTGGGAAGTTCTCTTTACAATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGTAGAGCATGGTTCTCTTACTTTATGTTTACGTTAATTGTTGGTGACATCGATGCTTTGTCGTGTGTGTTTCGTTCCGTGATAACAAAAATTGATTTTGAACAAATCATTTTTGGCTCTTCCTACCGTGAAACCAAACACACAAGTCATTCTCTTTTCTTCTAAATAAACTTTTGTTTAAAGTTCCTTTCATTTTAAAATCTTGATACATTTTGTTCCATCCTACTTACAGGAGGGTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAACCATCGTCGCTTACCAGAAGAACTTAAAAGGTATGAAATGTTCTTATTCTTTTAATGAATCAAATCAACATTGCCAAAACACATCTATCAAATAATGGATTACTTATTATGGTACAAATGATGGATACTATATCTGTCACGCAGGAGAGTGCGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTGGAAAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAATAAAGTATGCATTTAAAAAGAGTTCATGATATAATCTTTAAGTCGATTTTATTTATCTGGTTCAGATGTTATGTGAACTTTAAAATCTCACCTATAATGTTTTAAATAAAATTTGTCTCACCTTAAAGAGTTGAATGAGAAAACTAGTTTCAAGACAAAGGTTTATGCAAATTCATAATGAAACTAAAACAATGACGCATTAAAAGCCAATTATATTAAACAAGTTTGAATGCGATTTATGATGATGATTTAATTTTCTATGATGATCTAACATTTCTACAGGTTCGAATTTTTTCCCATATGGCTGAGGATGACCCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACGACATACATTAAAGGAAGTAAAATTCTCAGTCAGGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCGTCGGAGAGGATGGAATTCCGGTTCCGTTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGGTACAACTATACTTGATATAATGATAACATGCCTCAAAAGAAGTTGTCGCAATCAGCAACGTGCCTCAAACCATGTTTAATCGATGTGGTTTCTCTTGCAGAAGGTAAAAAAATAAAGCTTCACGGCCAGGGTTTGACTAGCGACCGAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGTGCTAAAGACATTGAAGAAGTCACAACTCTTTTCGCAAGATATTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTCATTTATTTATTCATCCATCCCATTCCCCTTCTGTCTTTGTGTCAATACTTCAATATATCTTCACCCTTTTATGATTCAATTGCATTTCGGTGTTGTGTTTGGGTTGGGCTTAACTCAACCCTACAGAGCCGTCTTATAAGGTTAAGAACACCCATCACTTATAAACACATTCTCAGACCTTATCTCTTTTTTAAGTGGGACTTGGATTTTTCCTAATACGCCCGAATCTATTGTACTCGGCGCATGAATATAAATGATGGGTGGTTCAAATCAATAGGCTCTCCGATACCATCTTAGAATTTGAGTTAGGCCTAACTCAACCATTAAAACACTGGCTTGATAGGTGGGAAGTAAGAGCTACCCACCACTTGAATACATATTGTCATATCTTATCTCATCCAATATGGAACTCATAACAATTTGCATATCTGATACAAATCCATAAGTATGCTATTTACATGCCTAATATCTATTATCAAAACCATGTCTCTGACATAATAATTTGGTTGTTTTGTCTTATGTTAGGTATGAATCACCTTACTGGAAATCCTTTGCAGCAAACAGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGAGCTAATACCGCACAAAATGATTATCAAACATTGATGCCATAG
Protein sequence

>MS.gene27383.t1

MNHFDKDEIPILSETRGQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTTRKTPVSQMSGPLYASPATGNPFQNNIIVAGNKVGENKTEKFSTFDGTDKNEHLLRSGQLGMCNDPYCTTCPTYFKVAQQRKPRAPTIFDPKFHNSLYGDAKGYGRKLFSFCSSCIPGVMNPHAKVVQQWNKFLAIFCLVAIFVDPLFFFLLYVEKDNKCIRINHAMATTLVVLRSVTDVVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQIMIIFILPSSLGSSGANYAKNLLRLGILIQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHRTNLTACMKLIDCHHNDAWSQDQGAKDCLNSSSDAFSYGIYNAAVPLTIETRVVNKYVYALFWGFQQISTLAGNQQPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEELKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVNKVRIFSHMAEDDPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESVGEDGIPVPLSEGDACGEELLRWYLEQSSESKEGKKIKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARYLRSPRVQGVIRYESPYWKSFAANRIQVAWRYRKKRLSRANTAQNDYQTLMP