Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28109.t1 | XP_003630054.2 | 98.1 | 425 | 8 | 0 | 1 | 425 | 51 | 475 | 5.00E-231 | 810.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28109.t1 | E9L7A5 | 85.2 | 419 | 62 | 0 | 1 | 419 | 55 | 473 | 7.1e-202 | 704.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28109.t1 | G7LAD1 | 98.1 | 425 | 8 | 0 | 1 | 425 | 51 | 475 | 3.6e-231 | 810.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031869 | MS.gene28109 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28109.t1 | MTR_8g091280 | 98.118 | 425 | 8 | 0 | 1 | 425 | 51 | 475 | 0.0 | 853 |
| MS.gene28109.t1 | MTR_7g106830 | 86.916 | 428 | 53 | 1 | 1 | 425 | 46 | 473 | 0.0 | 758 |
| MS.gene28109.t1 | MTR_1807s0010 | 39.332 | 389 | 232 | 2 | 25 | 412 | 7 | 392 | 4.04e-87 | 271 |
| MS.gene28109.t1 | MTR_3g072670 | 30.769 | 390 | 246 | 10 | 33 | 416 | 72 | 443 | 1.84e-50 | 176 |
| MS.gene28109.t1 | MTR_3g072680 | 29.744 | 390 | 250 | 10 | 33 | 416 | 29 | 400 | 1.68e-48 | 170 |
| MS.gene28109.t1 | MTR_1g087760 | 31.854 | 383 | 225 | 11 | 52 | 416 | 30 | 394 | 2.64e-42 | 154 |
| MS.gene28109.t1 | MTR_4g011820 | 29.661 | 354 | 220 | 10 | 80 | 425 | 62 | 394 | 3.13e-40 | 148 |
| MS.gene28109.t1 | MTR_3g072690 | 29.499 | 339 | 183 | 10 | 52 | 388 | 11 | 295 | 1.32e-36 | 136 |
| MS.gene28109.t1 | MTR_8g061360 | 24.869 | 382 | 252 | 11 | 51 | 413 | 42 | 407 | 1.39e-23 | 102 |
| MS.gene28109.t1 | MTR_2g090615 | 23.377 | 385 | 255 | 14 | 49 | 413 | 46 | 410 | 1.36e-17 | 84.7 |
| MS.gene28109.t1 | MTR_8g101750 | 23.155 | 393 | 267 | 13 | 47 | 416 | 46 | 426 | 2.85e-17 | 84.0 |
| MS.gene28109.t1 | MTR_2g008430 | 24.000 | 325 | 209 | 11 | 51 | 350 | 72 | 383 | 8.79e-16 | 79.3 |
| MS.gene28109.t1 | MTR_8g098930 | 22.427 | 379 | 256 | 16 | 71 | 425 | 80 | 444 | 4.63e-15 | 77.4 |
| MS.gene28109.t1 | MTR_8g101820 | 22.938 | 388 | 261 | 15 | 47 | 416 | 46 | 413 | 1.54e-12 | 69.3 |
| MS.gene28109.t1 | MTR_6g463260 | 21.448 | 373 | 259 | 13 | 65 | 416 | 166 | 525 | 2.04e-12 | 69.3 |
| MS.gene28109.t1 | MTR_7g079080 | 23.392 | 342 | 233 | 13 | 65 | 389 | 73 | 402 | 1.48e-11 | 66.6 |
| MS.gene28109.t1 | MTR_4g097540 | 20.557 | 287 | 201 | 6 | 103 | 364 | 105 | 389 | 4.13e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28109.t1 | AT2G22250 | 79.602 | 402 | 82 | 0 | 18 | 419 | 68 | 469 | 0.0 | 674 |
| MS.gene28109.t1 | AT2G22250 | 79.602 | 402 | 82 | 0 | 18 | 419 | 68 | 469 | 0.0 | 674 |
| MS.gene28109.t1 | AT2G22250 | 79.602 | 402 | 82 | 0 | 18 | 419 | 21 | 422 | 0.0 | 673 |
| MS.gene28109.t1 | AT1G77670 | 30.769 | 390 | 246 | 10 | 33 | 416 | 65 | 436 | 3.23e-54 | 186 |
| MS.gene28109.t1 | AT1G80360 | 28.045 | 353 | 226 | 9 | 80 | 425 | 62 | 393 | 9.66e-36 | 136 |
| MS.gene28109.t1 | AT1G80360 | 28.045 | 353 | 226 | 9 | 80 | 425 | 62 | 393 | 9.66e-36 | 136 |
| MS.gene28109.t1 | AT1G80360 | 28.045 | 353 | 226 | 9 | 80 | 425 | 62 | 393 | 9.66e-36 | 136 |
| MS.gene28109.t1 | AT1G80360 | 28.045 | 353 | 226 | 9 | 80 | 425 | 62 | 393 | 9.66e-36 | 136 |
| MS.gene28109.t1 | AT4G28420 | 23.810 | 378 | 261 | 10 | 50 | 412 | 61 | 426 | 1.42e-23 | 102 |
| MS.gene28109.t1 | AT5G36160 | 21.782 | 404 | 288 | 10 | 29 | 414 | 17 | 410 | 1.25e-22 | 99.8 |
| MS.gene28109.t1 | AT2G20610 | 24.274 | 379 | 258 | 10 | 51 | 413 | 68 | 433 | 6.22e-22 | 98.2 |
| MS.gene28109.t1 | AT2G24850 | 23.951 | 405 | 264 | 14 | 33 | 413 | 33 | 417 | 9.74e-22 | 97.4 |
| MS.gene28109.t1 | AT5G53970 | 22.572 | 381 | 272 | 9 | 46 | 413 | 30 | 400 | 5.56e-20 | 92.0 |
| MS.gene28109.t1 | AT4G28420 | 24.299 | 321 | 208 | 11 | 50 | 348 | 61 | 368 | 8.92e-20 | 90.9 |
| MS.gene28109.t1 | AT2G20610 | 23.932 | 351 | 238 | 10 | 51 | 385 | 68 | 405 | 8.71e-18 | 85.5 |
| MS.gene28109.t1 | AT4G28410 | 22.481 | 387 | 255 | 12 | 51 | 413 | 70 | 435 | 3.62e-17 | 83.6 |
| MS.gene28109.t1 | AT4G23600 | 21.994 | 341 | 246 | 10 | 82 | 413 | 73 | 402 | 4.03e-16 | 80.5 |
| MS.gene28109.t1 | AT4G28410 | 25.670 | 261 | 174 | 8 | 51 | 296 | 70 | 325 | 1.55e-15 | 78.6 |
| MS.gene28109.t1 | AT3G61510 | 22.126 | 348 | 243 | 12 | 87 | 417 | 94 | 430 | 3.01e-14 | 74.7 |
| MS.gene28109.t1 | AT2G13810 | 24.419 | 344 | 211 | 12 | 77 | 397 | 103 | 420 | 5.65e-14 | 73.9 |
| MS.gene28109.t1 | AT1G01480 | 25.688 | 218 | 139 | 6 | 87 | 285 | 95 | 308 | 8.28e-14 | 73.6 |
| MS.gene28109.t1 | AT4G23600 | 22.006 | 309 | 221 | 10 | 114 | 413 | 1 | 298 | 1.02e-13 | 72.0 |
| MS.gene28109.t1 | AT1G62960 | 23.263 | 331 | 219 | 12 | 78 | 387 | 202 | 518 | 4.07e-13 | 71.6 |
| MS.gene28109.t1 | AT4G26200 | 24.186 | 215 | 147 | 5 | 87 | 286 | 102 | 315 | 8.62e-13 | 70.1 |
| MS.gene28109.t1 | AT4G23600 | 21.429 | 322 | 215 | 12 | 82 | 385 | 73 | 374 | 1.41e-11 | 66.2 |
Find 113 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGCCAACCTTGCCATTTC+TGG | 0.079416 | 4.4:-10089866 | None:intergenic |
| ATGCAGCAACTCCGGCTTTC+TGG | 0.110981 | 4.4:-10090731 | None:intergenic |
| TAGAGTTCTGTTCCACATTT+TGG | 0.120660 | 4.4:-10090247 | None:intergenic |
| GCAATTTGTCATAAGCTTAA+AGG | 0.163237 | 4.4:+10088866 | MS.gene28109:CDS |
| TCATTATTCCAGCTCCATTT+TGG | 0.216900 | 4.4:+10089834 | MS.gene28109:CDS |
| ATTTCTAATGTTCCAGCATT+AGG | 0.240150 | 4.4:-10088836 | None:intergenic |
| ATTGATTTCAGCTCCTATTA+TGG | 0.261186 | 4.4:+10091004 | MS.gene28109:CDS |
| TTTCTAATGTTCCAGCATTA+GGG | 0.292089 | 4.4:-10088835 | None:intergenic |
| TATTGAATTTAGTTCACTTC+AGG | 0.297595 | 4.4:+10090693 | MS.gene28109:intron |
| TCTGGGTAACTGACCCAAAA+TGG | 0.303684 | 4.4:-10089848 | None:intergenic |
| GGAAGAGAAGCTGAGGGATT+TGG | 0.313352 | 4.4:+10091025 | MS.gene28109:CDS |
| ATTTGGTAAAATTGAGAATT+CGG | 0.325465 | 4.4:+10091042 | MS.gene28109:CDS |
| CTCAGCTTCTCTTCCATAAT+AGG | 0.326334 | 4.4:-10091017 | None:intergenic |
| GATCAGATTGTTGTTACTAA+TGG | 0.334270 | 4.4:+10089008 | MS.gene28109:CDS |
| CTCAAAATCCGATTCTGAAT+TGG | 0.336223 | 4.4:+10088469 | MS.gene28109:CDS |
| CAAGAAGTTTGGGATCTAAA+AGG | 0.342092 | 4.4:-10089931 | None:intergenic |
| GCAAAGCTTGTATGCGTTGC+TGG | 0.343335 | 4.4:-10090216 | None:intergenic |
| AGCAAAGCACCCCAGGCTTC+TGG | 0.348641 | 4.4:+10090060 | MS.gene28109:CDS |
| CTTGTCCCAGGGAGTGCATT+TGG | 0.356618 | 4.4:+10091193 | MS.gene28109:CDS |
| TGCAGCAACTCCGGCTTTCT+GGG | 0.361156 | 4.4:-10090730 | None:intergenic |
| TGGCGGCTTGGATATATTGC+TGG | 0.367266 | 4.4:+10090506 | MS.gene28109:CDS |
| ACAGATCCTGTCGGGTTAGA+TGG | 0.370302 | 4.4:-10089998 | None:intergenic |
| ACTGCTGCAATAAAATGCTT+TGG | 0.370819 | 4.4:-10090530 | None:intergenic |
| CCGGCAGCCAAGCGAATAAC+AGG | 0.376297 | 4.4:-10088590 | None:intergenic |
| TGTCGATATCTGTTGGATAA+AGG | 0.377700 | 4.4:+10091073 | MS.gene28109:CDS |
| CGGCCAACCTTGCCATTTCT+GGG | 0.386197 | 4.4:-10089865 | None:intergenic |
| GGGATCTAAAAGGAAATTGT+TGG | 0.397371 | 4.4:-10089921 | None:intergenic |
| TTGGGTCAGTTACCCAGAAA+TGG | 0.412108 | 4.4:+10089853 | MS.gene28109:CDS |
| CCTGTTATTCGCTTGGCTGC+CGG | 0.414314 | 4.4:+10088590 | MS.gene28109:CDS |
| ATTGAATTTAGTTCACTTCA+GGG | 0.420218 | 4.4:+10090694 | MS.gene28109:intron |
| CTGCTGCAATAAAATGCTTT+GGG | 0.424694 | 4.4:-10090529 | None:intergenic |
| AAAGCCGGAGTTGCTGCATT+AGG | 0.432570 | 4.4:+10090735 | MS.gene28109:CDS |
| TGGCGTTCCTGTTATTCGCT+TGG | 0.434147 | 4.4:+10088583 | MS.gene28109:CDS |
| GCAATGACGGGTTGGCGGCT+TGG | 0.443014 | 4.4:+10090494 | MS.gene28109:CDS |
| ACCGCGGGTGTATCAAAATC+AGG | 0.445970 | 4.4:-10088617 | None:intergenic |
| ATCAACTTCCAATTCAGAAT+CGG | 0.450108 | 4.4:-10088477 | None:intergenic |
| ACAAGTGCAGCAGAGGTAAG+AGG | 0.450109 | 4.4:-10091301 | None:intergenic |
| CCTTTGCAATGACGGGTTGG+CGG | 0.450458 | 4.4:+10090489 | MS.gene28109:CDS |
| CCGCAGGCCTTTGCAATGAC+GGG | 0.465375 | 4.4:+10090482 | MS.gene28109:intron |
| TAGAGAACGAAGGGATTACT+TGG | 0.471008 | 4.4:+10090806 | MS.gene28109:CDS |
| GTGATTGCAGTTTGCTCACC+GGG | 0.475286 | 4.4:+10089056 | MS.gene28109:CDS |
| CGAATCAACATACCTGACTT+TGG | 0.475879 | 4.4:-10090562 | None:intergenic |
| ACCGCAGGCCTTTGCAATGA+CGG | 0.477256 | 4.4:+10090481 | MS.gene28109:intron |
| GTCTCTCTGTCGATATCTGT+TGG | 0.478803 | 4.4:+10091066 | MS.gene28109:CDS |
| CAAAGCTTGTATGCGTTGCT+GGG | 0.479964 | 4.4:-10090215 | None:intergenic |
| TGGGGAGGCTGTTTCTATCA+TGG | 0.481358 | 4.4:+10090773 | MS.gene28109:CDS |
| TTAGTAACAACAATCTGATC+AGG | 0.481417 | 4.4:-10089005 | None:intergenic |
| GGCATCCCTTCCCACCCTAC+AGG | 0.485602 | 4.4:+10091246 | MS.gene28109:CDS |
| ATGCTGGAACATTAGAAATA+CGG | 0.486178 | 4.4:+10088840 | MS.gene28109:CDS |
| ATTCTCTACAGCTGCCTGTA+GGG | 0.486637 | 4.4:-10091260 | None:intergenic |
| AACAGAACTCTAACTGTGAA+TGG | 0.487843 | 4.4:+10090258 | MS.gene28109:CDS |
| AGCTGCCTGTAGGGTGGGAA+GGG | 0.487855 | 4.4:-10091251 | None:intergenic |
| TAGGATACACAGATCCTGTC+GGG | 0.490141 | 4.4:-10090006 | None:intergenic |
| GCATTAGGACTAGGCTATGC+TGG | 0.493785 | 4.4:+10090750 | MS.gene28109:CDS |
| CAGCTGCCTGTAGGGTGGGA+AGG | 0.496299 | 4.4:-10091252 | None:intergenic |
| GTAATAGCGACAGTTCTTGA+AGG | 0.496768 | 4.4:-10088533 | None:intergenic |
| GCCACTGCTCTTGTTCAAGC+TGG | 0.498280 | 4.4:+10088563 | MS.gene28109:CDS |
| CTACAGGTAGCACTTGTCCC+AGG | 0.503584 | 4.4:+10091181 | MS.gene28109:intron |
| AGTCGGAAAGATCCAAAGTC+AGG | 0.515039 | 4.4:+10090550 | MS.gene28109:CDS |
| TCGTCACCAAATGCACTCCC+TGG | 0.520238 | 4.4:-10091199 | None:intergenic |
| GTATAACTTTACCAGAAGCC+TGG | 0.521516 | 4.4:-10090071 | None:intergenic |
| AGTGATTGCAGTTTGCTCAC+CGG | 0.523981 | 4.4:+10089055 | MS.gene28109:CDS |
| TATAACTTTACCAGAAGCCT+GGG | 0.526263 | 4.4:-10090070 | None:intergenic |
| ACAAGGTATACCCCTAATGC+TGG | 0.536420 | 4.4:+10088824 | MS.gene28109:CDS |
| TTACCCAGAAATGGCAAGGT+TGG | 0.540508 | 4.4:+10089862 | MS.gene28109:CDS |
| ACTAGGCTATGCTGGTGGGG+AGG | 0.541198 | 4.4:+10090758 | MS.gene28109:CDS |
| CTCTACAGCTGCCTGTAGGG+TGG | 0.542906 | 4.4:-10091257 | None:intergenic |
| TAACTGACCCAAAATGGAGC+TGG | 0.543528 | 4.4:-10089842 | None:intergenic |
| TATTCTCTACAGCTGCCTGT+AGG | 0.544125 | 4.4:-10091261 | None:intergenic |
| GCTTTCTGGGATATACTACT+AGG | 0.548066 | 4.4:-10090717 | None:intergenic |
| TGTTAAAATATCTGAACCAC+AGG | 0.548557 | 4.4:+10090854 | MS.gene28109:CDS |
| CAAGTGCAGCAGAGGTAAGA+GGG | 0.549680 | 4.4:-10091300 | None:intergenic |
| TCTACAGCTGCCTGTAGGGT+GGG | 0.554897 | 4.4:-10091256 | None:intergenic |
| AGGCCTTTGCAATGACGGGT+TGG | 0.554930 | 4.4:+10090486 | MS.gene28109:intron |
| AGATTGTAGCAAAGCACCCC+AGG | 0.557592 | 4.4:+10090053 | MS.gene28109:CDS |
| ACATTACTCACCTCATCTCC+CGG | 0.560555 | 4.4:-10089074 | None:intergenic |
| TTGCATCTTTACCCAAAATG+TGG | 0.561642 | 4.4:+10090235 | MS.gene28109:CDS |
| GGAGTTGCTGCATTAGGACT+AGG | 0.564666 | 4.4:+10090741 | MS.gene28109:CDS |
| CGTCACCAAATGCACTCCCT+GGG | 0.565898 | 4.4:-10091198 | None:intergenic |
| GGGATGCCGCATAAGAGATA+CGG | 0.568342 | 4.4:-10091231 | None:intergenic |
| ATTGACGTTGGAAGAATCAC+AGG | 0.568374 | 4.4:-10089896 | None:intergenic |
| ATATCTGTTGGATAAAGGCC+AGG | 0.568797 | 4.4:+10091078 | MS.gene28109:CDS |
| TAGGACTAGGCTATGCTGGT+GGG | 0.570942 | 4.4:+10090754 | MS.gene28109:CDS |
| AAATTGTTGGATATTGACGT+TGG | 0.572136 | 4.4:-10089908 | None:intergenic |
| CCGCCAACCCGTCATTGCAA+AGG | 0.572920 | 4.4:-10090489 | None:intergenic |
| TGTTCACCATCTAACCCGAC+AGG | 0.575722 | 4.4:+10089992 | MS.gene28109:CDS |
| TGTATCAAAATCAGGTTCAC+CGG | 0.576041 | 4.4:-10088609 | None:intergenic |
| TACAGGTAGCACTTGTCCCA+GGG | 0.579092 | 4.4:+10091182 | MS.gene28109:intron |
| AGGACTAGGCTATGCTGGTG+GGG | 0.587017 | 4.4:+10090755 | MS.gene28109:CDS |
| AGCTAAGCAGAGTATTACTC+AGG | 0.591051 | 4.4:+10089031 | MS.gene28109:CDS |
| AATACCTCGGCAATAACCGC+GGG | 0.593217 | 4.4:-10088632 | None:intergenic |
| TTAGGATACACAGATCCTGT+CGG | 0.593757 | 4.4:-10090007 | None:intergenic |
| AAGAATCACAGGTGTTGCAT+CGG | 0.596920 | 4.4:-10089885 | None:intergenic |
| AGTTTGCTCACCGGGAGATG+AGG | 0.598945 | 4.4:+10089064 | MS.gene28109:CDS |
| CTATTATGGAAGAGAAGCTG+AGG | 0.605349 | 4.4:+10091018 | MS.gene28109:CDS |
| TAGTCCTAATGCAGCAACTC+CGG | 0.606423 | 4.4:-10090739 | None:intergenic |
| AGTAGTATATCCCAGAAAGC+CGG | 0.612472 | 4.4:+10090720 | MS.gene28109:CDS |
| ATATTAAACAAGTGCAGCAG+AGG | 0.613245 | 4.4:-10091308 | None:intergenic |
| GAAAGCGTTTAGAGAACGAA+GGG | 0.615579 | 4.4:+10090797 | MS.gene28109:CDS |
| TTCTAATGTTCCAGCATTAG+GGG | 0.620898 | 4.4:-10088834 | None:intergenic |
| AAATACCTCGGCAATAACCG+CGG | 0.623880 | 4.4:-10088633 | None:intergenic |
| GGGATTAATGCAATTCGTGA+AGG | 0.627742 | 4.4:+10088797 | MS.gene28109:CDS |
| TCAGTTACCCAGAAATGGCA+AGG | 0.632651 | 4.4:+10089858 | MS.gene28109:CDS |
| TATTATGGAAGAGAAGCTGA+GGG | 0.639505 | 4.4:+10091019 | MS.gene28109:CDS |
| TACACCCGCGGTTATTGCCG+AGG | 0.640881 | 4.4:+10088628 | MS.gene28109:CDS |
| TTAGGACTAGGCTATGCTGG+TGG | 0.650155 | 4.4:+10090753 | MS.gene28109:CDS |
| TTGCATCCGTATCTCTTATG+CGG | 0.655090 | 4.4:+10091225 | MS.gene28109:CDS |
| GCCAGCTTGAACAAGAGCAG+TGG | 0.668141 | 4.4:-10088564 | None:intergenic |
| GGTTTGACAGCATTAACACG+TGG | 0.682883 | 4.4:-10088512 | None:intergenic |
| CAATTCGTGAAGGATACACA+AGG | 0.683943 | 4.4:+10088807 | MS.gene28109:CDS |
| AAAGCTTGTATGCGTTGCTG+GGG | 0.690722 | 4.4:-10090214 | None:intergenic |
| TGAAAGCGTTTAGAGAACGA+AGG | 0.691237 | 4.4:+10090796 | MS.gene28109:CDS |
| ATAACTTTACCAGAAGCCTG+GGG | 0.763746 | 4.4:-10090069 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTATACTATTATTATTTA+GGG | + | chr4.4:10089106-10089125 | MS.gene28109:intron | 10.0% |
| !! | TCATTATACTATTATTATTT+AGG | + | chr4.4:10089105-10089124 | MS.gene28109:intron | 10.0% |
| !!! | TTAATACTTAATAACATTTT+TGG | - | chr4.4:10089281-10089300 | None:intergenic | 10.0% |
| !! | AAAATAACTATTAAAGGAAT+AGG | - | chr4.4:10090903-10090922 | None:intergenic | 15.0% |
| !!! | ATTTTTTATACGAATATTTC+AGG | + | chr4.4:10089811-10089830 | MS.gene28109:intron | 15.0% |
| !! | AATAAACTAGAAACAACTTA+TGG | - | chr4.4:10088732-10088751 | None:intergenic | 20.0% |
| !! | AATTCAAATTGAAAATACCT+CGG | - | chr4.4:10088648-10088667 | None:intergenic | 20.0% |
| !! | ACATGGAAAATAACTATTAA+AGG | - | chr4.4:10090909-10090928 | None:intergenic | 20.0% |
| !! | ATTTGGTAAAATTGAGAATT+CGG | + | chr4.4:10091042-10091061 | MS.gene28109:CDS | 20.0% |
| !! | TAAAGTGAGTAAAAGATATA+AGG | - | chr4.4:10089527-10089546 | None:intergenic | 20.0% |
| !! | TCAAGATAATGCATAAAATA+AGG | - | chr4.4:10090601-10090620 | None:intergenic | 20.0% |
| !! | TTACAGAATTATGTTTGATT+TGG | + | chr4.4:10089741-10089760 | MS.gene28109:intron | 20.0% |
| !!! | AAGGATTTTACAAAAATGAA+AGG | - | chr4.4:10089508-10089527 | None:intergenic | 20.0% |
| !!! | ACATTTTACTTTTTTTTGAG+AGG | + | chr4.4:10089670-10089689 | MS.gene28109:intron | 20.0% |
| !!! | ACTTAATAACATTTTTGGAT+GGG | - | chr4.4:10089276-10089295 | None:intergenic | 20.0% |
| !!! | ATCTCTTCAAGTAAATTTTT+AGG | - | chr4.4:10090028-10090047 | None:intergenic | 20.0% |
| !!! | CTGTATTATATGGTTTTATT+TGG | + | chr4.4:10088903-10088922 | MS.gene28109:intron | 20.0% |
| !!! | TAAAACAGTTTAAAATCATC+AGG | - | chr4.4:10090462-10090481 | None:intergenic | 20.0% |
| !!! | TACTTAATAACATTTTTGGA+TGG | - | chr4.4:10089277-10089296 | None:intergenic | 20.0% |
| !!! | TTAGTTTTATTACTTGTGTA+TGG | + | chr4.4:10088763-10088782 | MS.gene28109:intron | 20.0% |
| !!! | TTATTATTTAGGGTAAACAT+CGG | + | chr4.4:10089116-10089135 | MS.gene28109:intron | 20.0% |
| ! | ACAACTATTAAGATCTTAAG+AGG | - | chr4.4:10090148-10090167 | None:intergenic | 25.0% |
| ! | ATGTTCTCTTTCTATCATAA+TGG | + | chr4.4:10090306-10090325 | MS.gene28109:intron | 25.0% |
| ! | TGGAATAATTATATGAGATG+TGG | + | chr4.4:10088923-10088942 | MS.gene28109:intron | 25.0% |
| ! | TTTGATTGTGCTGTATTATA+TGG | + | chr4.4:10088893-10088912 | MS.gene28109:intron | 25.0% |
| !! | AATGCATTAAAGATTTTCCT+AGG | - | chr4.4:10089363-10089382 | None:intergenic | 25.0% |
| !! | ATTGAATTTAGTTCACTTCA+GGG | + | chr4.4:10090694-10090713 | MS.gene28109:intron | 25.0% |
| !! | TATTGAATTTAGTTCACTTC+AGG | + | chr4.4:10090693-10090712 | MS.gene28109:intron | 25.0% |
| !! | TCTTGACTTTTCAGTAATTT+TGG | - | chr4.4:10089960-10089979 | None:intergenic | 25.0% |
| !! | TTTTGTCATAATGAAAACCT+AGG | + | chr4.4:10089343-10089362 | MS.gene28109:intron | 25.0% |
| !!! | AAAAGTTTTAGCGAAATTGA+TGG | + | chr4.4:10090831-10090850 | MS.gene28109:CDS | 25.0% |
| !!! | TAACATTTTGTTTTGTCTAC+AGG | + | chr4.4:10091165-10091184 | MS.gene28109:intron | 25.0% |
| AAATTGTTGGATATTGACGT+TGG | - | chr4.4:10089911-10089930 | None:intergenic | 30.0% | |
| ACTTATGGACATGTTATAAG+TGG | - | chr4.4:10088717-10088736 | None:intergenic | 30.0% | |
| ATCAACTTCCAATTCAGAAT+CGG | - | chr4.4:10088480-10088499 | None:intergenic | 30.0% | |
| ATGCTGGAACATTAGAAATA+CGG | + | chr4.4:10088840-10088859 | MS.gene28109:CDS | 30.0% | |
| ATGCTTCAATGTATTCAACT+TGG | + | chr4.4:10090113-10090132 | MS.gene28109:intron | 30.0% | |
| ATTTCTAATGTTCCAGCATT+AGG | - | chr4.4:10088839-10088858 | None:intergenic | 30.0% | |
| GCAATTTGTCATAAGCTTAA+AGG | + | chr4.4:10088866-10088885 | MS.gene28109:CDS | 30.0% | |
| GTTTGTATTCAATGAGCAAA+AGG | - | chr4.4:10089584-10089603 | None:intergenic | 30.0% | |
| TAAAATAAGGCTGACAAATG+TGG | - | chr4.4:10090588-10090607 | None:intergenic | 30.0% | |
| TAAAATACTGCTAGTATACC+TGG | - | chr4.4:10091099-10091118 | None:intergenic | 30.0% | |
| TCGGTATTTATGCATTGAAT+TGG | + | chr4.4:10089220-10089239 | MS.gene28109:intron | 30.0% | |
| TGTAGATTATGAAATCAGCA+TGG | + | chr4.4:10090418-10090437 | MS.gene28109:intron | 30.0% | |
| TGTTAAAATATCTGAACCAC+AGG | + | chr4.4:10090854-10090873 | MS.gene28109:CDS | 30.0% | |
| TTAGTAACAACAATCTGATC+AGG | - | chr4.4:10089008-10089027 | None:intergenic | 30.0% | |
| TTATGCATTGAATTGGCATT+GGG | + | chr4.4:10089227-10089246 | MS.gene28109:intron | 30.0% | |
| TTTATGCATTGAATTGGCAT+TGG | + | chr4.4:10089226-10089245 | MS.gene28109:intron | 30.0% | |
| TTTCTAATGTTCCAGCATTA+GGG | - | chr4.4:10088838-10088857 | None:intergenic | 30.0% | |
| TTTCTATCATAATGGTATCG+AGG | + | chr4.4:10090314-10090333 | MS.gene28109:intron | 30.0% | |
| ! | AATTTTGGACTCAAGAAGTT+TGG | - | chr4.4:10089945-10089964 | None:intergenic | 30.0% |
| ! | ACTTGATTTCTGTTTGAGTT+GGG | + | chr4.4:10090620-10090639 | MS.gene28109:intron | 30.0% |
| ! | ATACTTTCTTTTCTCTTGCA+GGG | + | chr4.4:10090965-10090984 | MS.gene28109:intron | 30.0% |
| ! | ATTGATTTCAGCTCCTATTA+TGG | + | chr4.4:10091004-10091023 | MS.gene28109:CDS | 30.0% |
| ! | ATTTTAAACTGTTTTACCGC+AGG | + | chr4.4:10090466-10090485 | MS.gene28109:intron | 30.0% |
| ! | ATTTTGGACTCAAGAAGTTT+GGG | - | chr4.4:10089944-10089963 | None:intergenic | 30.0% |
| ! | GATCAGATTGTTGTTACTAA+TGG | + | chr4.4:10089008-10089027 | MS.gene28109:CDS | 30.0% |
| ! | TATACTTTCTTTTCTCTTGC+AGG | + | chr4.4:10090964-10090983 | MS.gene28109:intron | 30.0% |
| ! | TTACTTGTGTATGGTAATGT+AGG | + | chr4.4:10088772-10088791 | MS.gene28109:intron | 30.0% |
| ! | TTCTATCATAATGGTATCGA+GGG | + | chr4.4:10090315-10090334 | MS.gene28109:intron | 30.0% |
| ! | TTTTGACAATGTGTCGTAAT+TGG | + | chr4.4:10088947-10088966 | MS.gene28109:intron | 30.0% |
| !! | AACTGTGAATGGATTTTCTA+AGG | + | chr4.4:10090269-10090288 | MS.gene28109:CDS | 30.0% |
| !! | GTTTCTAGTTTATTCGAACA+TGG | + | chr4.4:10088738-10088757 | MS.gene28109:intron | 30.0% |
| !! | TCTTAATAGTTGTTTTGTGC+AGG | + | chr4.4:10090155-10090174 | MS.gene28109:intron | 30.0% |
| AAAATCATCAGGATCGAATC+TGG | - | chr4.4:10090451-10090470 | None:intergenic | 35.0% | |
| AAAGGAATAGGCAGATAAAC+TGG | - | chr4.4:10090891-10090910 | None:intergenic | 35.0% | |
| AACAGAACTCTAACTGTGAA+TGG | + | chr4.4:10090258-10090277 | MS.gene28109:CDS | 35.0% | |
| ACTGCTGCAATAAAATGCTT+TGG | - | chr4.4:10090533-10090552 | None:intergenic | 35.0% | |
| ATAACTACTTAGCGTGTGTT+TGG | + | chr4.4:10089140-10089159 | MS.gene28109:intron | 35.0% | |
| ATACCGAATCAACAAATCGT+AGG | - | chr4.4:10089207-10089226 | None:intergenic | 35.0% | |
| CTCAAAATCCGATTCTGAAT+TGG | + | chr4.4:10088469-10088488 | MS.gene28109:CDS | 35.0% | |
| CTGCTGCAATAAAATGCTTT+GGG | - | chr4.4:10090532-10090551 | None:intergenic | 35.0% | |
| GACAGAAAAGTGACAAAACA+TGG | - | chr4.4:10090926-10090945 | None:intergenic | 35.0% | |
| GACTTGATTTCTGTTTGAGT+TGG | + | chr4.4:10090619-10090638 | MS.gene28109:intron | 35.0% | |
| GATTATGAAATCAGCATGGA+TGG | + | chr4.4:10090422-10090441 | MS.gene28109:intron | 35.0% | |
| GCTAATAGCCTAATCATCTA+TGG | - | chr4.4:10089423-10089442 | None:intergenic | 35.0% | |
| GGGATCTAAAAGGAAATTGT+TGG | - | chr4.4:10089924-10089943 | None:intergenic | 35.0% | |
| TACCGAATCAACAAATCGTA+GGG | - | chr4.4:10089206-10089225 | None:intergenic | 35.0% | |
| TAGTCCAAAACCAAACCAAA+TGG | - | chr4.4:10089644-10089663 | None:intergenic | 35.0% | |
| TATAACTTTACCAGAAGCCT+GGG | - | chr4.4:10090073-10090092 | None:intergenic | 35.0% | |
| TATTATGGAAGAGAAGCTGA+GGG | + | chr4.4:10091019-10091038 | MS.gene28109:CDS | 35.0% | |
| TGACCTTCAATATGAAGTGT+TGG | + | chr4.4:10091128-10091147 | MS.gene28109:intron | 35.0% | |
| TGTATCAAAATCAGGTTCAC+CGG | - | chr4.4:10088612-10088631 | None:intergenic | 35.0% | |
| TGTCGATATCTGTTGGATAA+AGG | + | chr4.4:10091073-10091092 | MS.gene28109:CDS | 35.0% | |
| TTCTAATGTTCCAGCATTAG+GGG | - | chr4.4:10088837-10088856 | None:intergenic | 35.0% | |
| TTCTGAATTCTGATGCCATT+TGG | + | chr4.4:10089626-10089645 | MS.gene28109:intron | 35.0% | |
| TTGCATCTTTACCCAAAATG+TGG | + | chr4.4:10090235-10090254 | MS.gene28109:CDS | 35.0% | |
| ! | AAGCATTTTATTGCAGCAGT+CGG | + | chr4.4:10090533-10090552 | MS.gene28109:CDS | 35.0% |
| ! | AATTCTGATGCCATTTGGTT+TGG | + | chr4.4:10089631-10089650 | MS.gene28109:intron | 35.0% |
| ! | AGAGTTCTGTTCCACATTTT+GGG | - | chr4.4:10090249-10090268 | None:intergenic | 35.0% |
| ! | CAAGAAGTTTGGGATCTAAA+AGG | - | chr4.4:10089934-10089953 | None:intergenic | 35.0% |
| ! | CATTATTCCAGCTCCATTTT+GGG | + | chr4.4:10089835-10089854 | MS.gene28109:CDS | 35.0% |
| ! | TAGAGTTCTGTTCCACATTT+TGG | - | chr4.4:10090250-10090269 | None:intergenic | 35.0% |
| ! | TCATTATTCCAGCTCCATTT+TGG | + | chr4.4:10089834-10089853 | MS.gene28109:CDS | 35.0% |
| !! | AACCCTACGATTTGTTGATT+CGG | + | chr4.4:10089201-10089220 | MS.gene28109:intron | 35.0% |
| !! | ATAGCTTTGAAGAAAGAGAG+AGG | - | chr4.4:10090374-10090393 | None:intergenic | 35.0% |
| !! | GTAATTGGTTGATTTTGCAG+AGG | + | chr4.4:10088962-10088981 | MS.gene28109:intron | 35.0% |
| AGTAGTATATCCCAGAAAGC+CGG | + | chr4.4:10090720-10090739 | MS.gene28109:CDS | 40.0% | |
| ATAACTTTACCAGAAGCCTG+GGG | - | chr4.4:10090072-10090091 | None:intergenic | 40.0% | |
| ATATCTGTTGGATAAAGGCC+AGG | + | chr4.4:10091078-10091097 | MS.gene28109:CDS | 40.0% | |
| ATTGACGTTGGAAGAATCAC+AGG | - | chr4.4:10089899-10089918 | None:intergenic | 40.0% | |
| CAATTCGTGAAGGATACACA+AGG | + | chr4.4:10088807-10088826 | MS.gene28109:CDS | 40.0% | |
| CGAATCAACATACCTGACTT+TGG | - | chr4.4:10090565-10090584 | None:intergenic | 40.0% | |
| CTATGCTGCATTTCACAACA+TGG | + | chr4.4:10090390-10090409 | MS.gene28109:intron | 40.0% | |
| CTATTATGGAAGAGAAGCTG+AGG | + | chr4.4:10091018-10091037 | MS.gene28109:CDS | 40.0% | |
| CTCAGCTTCTCTTCCATAAT+AGG | - | chr4.4:10091020-10091039 | None:intergenic | 40.0% | |
| GCACCAACACTTCATATTGA+AGG | - | chr4.4:10091134-10091153 | None:intergenic | 40.0% | |
| GGGATTAATGCAATTCGTGA+AGG | + | chr4.4:10088797-10088816 | MS.gene28109:CDS | 40.0% | |
| GTAATAGCGACAGTTCTTGA+AGG | - | chr4.4:10088536-10088555 | None:intergenic | 40.0% | |
| GTATAACTTTACCAGAAGCC+TGG | - | chr4.4:10090074-10090093 | None:intergenic | 40.0% | |
| GTGATAACTGTTCTATCCTC+TGG | + | chr4.4:10089394-10089413 | MS.gene28109:intron | 40.0% | |
| TAATCATCTATGGCATCCAG+AGG | - | chr4.4:10089413-10089432 | None:intergenic | 40.0% | |
| TAGAGAACGAAGGGATTACT+TGG | + | chr4.4:10090806-10090825 | MS.gene28109:CDS | 40.0% | |
| TCTGGATGCCATAGATGATT+AGG | + | chr4.4:10089412-10089431 | MS.gene28109:intron | 40.0% | |
| TTAGGATACACAGATCCTGT+CGG | - | chr4.4:10090010-10090029 | None:intergenic | 40.0% | |
| TTGCATCCGTATCTCTTATG+CGG | + | chr4.4:10091225-10091244 | MS.gene28109:CDS | 40.0% | |
| ! | AAGAATCACAGGTGTTGCAT+CGG | - | chr4.4:10089888-10089907 | None:intergenic | 40.0% |
| ! | AGCTAAGCAGAGTATTACTC+AGG | + | chr4.4:10089031-10089050 | MS.gene28109:CDS | 40.0% |
| ! | TGTGTATGGTAATGTAGGCT+GGG | + | chr4.4:10088777-10088796 | MS.gene28109:intron | 40.0% |
| ! | TTGTGTATGGTAATGTAGGC+TGG | + | chr4.4:10088776-10088795 | MS.gene28109:intron | 40.0% |
| !! | GAAAGCGTTTAGAGAACGAA+GGG | + | chr4.4:10090797-10090816 | MS.gene28109:CDS | 40.0% |
| !! | GCTTTCTGGGATATACTACT+AGG | - | chr4.4:10090720-10090739 | None:intergenic | 40.0% |
| !! | GTTGATTTTGCAGAGGAGAA+TGG | + | chr4.4:10088969-10088988 | MS.gene28109:intron | 40.0% |
| !! | TAACATTTTTGGATGGGCGT+TGG | - | chr4.4:10089270-10089289 | None:intergenic | 40.0% |
| !! | TGAAAGCGTTTAGAGAACGA+AGG | + | chr4.4:10090796-10090815 | MS.gene28109:CDS | 40.0% |
| !!! | GATGCCATTTGGTTTGGTTT+TGG | + | chr4.4:10089637-10089656 | MS.gene28109:intron | 40.0% |
| AAAGCTTGTATGCGTTGCTG+GGG | - | chr4.4:10090217-10090236 | None:intergenic | 45.0% | |
| AAATACCTCGGCAATAACCG+CGG | - | chr4.4:10088636-10088655 | None:intergenic | 45.0% | |
| ACAAGGTATACCCCTAATGC+TGG | + | chr4.4:10088824-10088843 | MS.gene28109:CDS | 45.0% | |
| ACATTACTCACCTCATCTCC+CGG | - | chr4.4:10089077-10089096 | None:intergenic | 45.0% | |
| ACTGGATGAATTTGCACCTG+TGG | - | chr4.4:10090873-10090892 | None:intergenic | 45.0% | |
| AGTCGGAAAGATCCAAAGTC+AGG | + | chr4.4:10090550-10090569 | MS.gene28109:CDS | 45.0% | |
| ATCATCAGGATCGAATCTGG+AGG | - | chr4.4:10090448-10090467 | None:intergenic | 45.0% | |
| ATTCTCTACAGCTGCCTGTA+GGG | - | chr4.4:10091263-10091282 | None:intergenic | 45.0% | |
| CAAAGCTTGTATGCGTTGCT+GGG | - | chr4.4:10090218-10090237 | None:intergenic | 45.0% | |
| GGTTTGACAGCATTAACACG+TGG | - | chr4.4:10088515-10088534 | None:intergenic | 45.0% | |
| GTCTCTCTGTCGATATCTGT+TGG | + | chr4.4:10091066-10091085 | MS.gene28109:CDS | 45.0% | |
| TAACTGACCCAAAATGGAGC+TGG | - | chr4.4:10089845-10089864 | None:intergenic | 45.0% | |
| TAGGATACACAGATCCTGTC+GGG | - | chr4.4:10090009-10090028 | None:intergenic | 45.0% | |
| TAGTCCTAATGCAGCAACTC+CGG | - | chr4.4:10090742-10090761 | None:intergenic | 45.0% | |
| TATTCTCTACAGCTGCCTGT+AGG | - | chr4.4:10091264-10091283 | None:intergenic | 45.0% | |
| TCAGTTACCCAGAAATGGCA+AGG | + | chr4.4:10089858-10089877 | MS.gene28109:CDS | 45.0% | |
| TCTGGGTAACTGACCCAAAA+TGG | - | chr4.4:10089851-10089870 | None:intergenic | 45.0% | |
| TTACCCAGAAATGGCAAGGT+TGG | + | chr4.4:10089862-10089881 | MS.gene28109:CDS | 45.0% | |
| TTCAACATGCGGTGATGTCA+TGG | - | chr4.4:10089179-10089198 | None:intergenic | 45.0% | |
| TTGGGTCAGTTACCCAGAAA+TGG | + | chr4.4:10089853-10089872 | MS.gene28109:CDS | 45.0% | |
| ! | AGTGATTGCAGTTTGCTCAC+CGG | + | chr4.4:10089055-10089074 | MS.gene28109:CDS | 45.0% |
| !! | ACCTGATTTTGATACACCCG+CGG | + | chr4.4:10088616-10088635 | MS.gene28109:CDS | 45.0% |
| !! | CTGTTTGAGTTGGGATACTG+TGG | + | chr4.4:10090629-10090648 | MS.gene28109:intron | 45.0% |
| AAAGCCGGAGTTGCTGCATT+AGG | + | chr4.4:10090735-10090754 | MS.gene28109:CDS | 50.0% | |
| AATACCTCGGCAATAACCGC+GGG | - | chr4.4:10088635-10088654 | None:intergenic | 50.0% | |
| ACAAGTGCAGCAGAGGTAAG+AGG | - | chr4.4:10091304-10091323 | None:intergenic | 50.0% | |
| ACCGCGGGTGTATCAAAATC+AGG | - | chr4.4:10088620-10088639 | None:intergenic | 50.0% | |
| CAAGTGCAGCAGAGGTAAGA+GGG | - | chr4.4:10091303-10091322 | None:intergenic | 50.0% | |
| CGTAGGGTTGCTTCAACATG+CGG | - | chr4.4:10089190-10089209 | None:intergenic | 50.0% | |
| GCAAAGCTTGTATGCGTTGC+TGG | - | chr4.4:10090219-10090238 | None:intergenic | 50.0% | |
| GCATTAGGACTAGGCTATGC+TGG | + | chr4.4:10090750-10090769 | MS.gene28109:CDS | 50.0% | |
| GGAAGAGAAGCTGAGGGATT+TGG | + | chr4.4:10091025-10091044 | MS.gene28109:CDS | 50.0% | |
| GGAGTTGCTGCATTAGGACT+AGG | + | chr4.4:10090741-10090760 | MS.gene28109:CDS | 50.0% | |
| GGGATGCCGCATAAGAGATA+CGG | - | chr4.4:10091234-10091253 | None:intergenic | 50.0% | |
| TACAGGTAGCACTTGTCCCA+GGG | + | chr4.4:10091182-10091201 | MS.gene28109:intron | 50.0% | |
| TAGGACTAGGCTATGCTGGT+GGG | + | chr4.4:10090754-10090773 | MS.gene28109:CDS | 50.0% | |
| TGGCGTTCCTGTTATTCGCT+TGG | + | chr4.4:10088583-10088602 | MS.gene28109:CDS | 50.0% | |
| TGTTCACCATCTAACCCGAC+AGG | + | chr4.4:10089992-10090011 | MS.gene28109:CDS | 50.0% | |
| TTAGGACTAGGCTATGCTGG+TGG | + | chr4.4:10090753-10090772 | MS.gene28109:CDS | 50.0% | |
| ! | ACAGATCCTGTCGGGTTAGA+TGG | - | chr4.4:10090001-10090020 | None:intergenic | 50.0% |
| ! | AGATTGTAGCAAAGCACCCC+AGG | + | chr4.4:10090053-10090072 | MS.gene28109:CDS | 50.0% |
| ! | GTGATTGCAGTTTGCTCACC+GGG | + | chr4.4:10089056-10089075 | MS.gene28109:CDS | 50.0% |
| ! | TGGCGGCTTGGATATATTGC+TGG | + | chr4.4:10090506-10090525 | MS.gene28109:CDS | 50.0% |
| !! | TGGGGAGGCTGTTTCTATCA+TGG | + | chr4.4:10090773-10090792 | MS.gene28109:CDS | 50.0% |
| ACCGCAGGCCTTTGCAATGA+CGG | + | chr4.4:10090481-10090500 | MS.gene28109:intron | 55.0% | |
| AGGACTAGGCTATGCTGGTG+GGG | + | chr4.4:10090755-10090774 | MS.gene28109:CDS | 55.0% | |
| ATGCAGCAACTCCGGCTTTC+TGG | - | chr4.4:10090734-10090753 | None:intergenic | 55.0% | |
| CCTGTTATTCGCTTGGCTGC+CGG | + | chr4.4:10088590-10088609 | MS.gene28109:CDS | 55.0% | |
| CGTCACCAAATGCACTCCCT+GGG | - | chr4.4:10091201-10091220 | None:intergenic | 55.0% | |
| CTACAGGTAGCACTTGTCCC+AGG | + | chr4.4:10091181-10091200 | MS.gene28109:intron | 55.0% | |
| GCCACTGCTCTTGTTCAAGC+TGG | + | chr4.4:10088563-10088582 | MS.gene28109:CDS | 55.0% | |
| GCCAGCTTGAACAAGAGCAG+TGG | - | chr4.4:10088567-10088586 | None:intergenic | 55.0% | |
| TCGTCACCAAATGCACTCCC+TGG | - | chr4.4:10091202-10091221 | None:intergenic | 55.0% | |
| TCTACAGCTGCCTGTAGGGT+GGG | - | chr4.4:10091259-10091278 | None:intergenic | 55.0% | |
| TGCAGCAACTCCGGCTTTCT+GGG | - | chr4.4:10090733-10090752 | None:intergenic | 55.0% | |
| ! | AGTTTGCTCACCGGGAGATG+AGG | + | chr4.4:10089064-10089083 | MS.gene28109:CDS | 55.0% |
| ! | CGGCCAACCTTGCCATTTCT+GGG | - | chr4.4:10089868-10089887 | None:intergenic | 55.0% |
| ! | CTTGTCCCAGGGAGTGCATT+TGG | + | chr4.4:10091193-10091212 | MS.gene28109:CDS | 55.0% |
| ! | TCGGCCAACCTTGCCATTTC+TGG | - | chr4.4:10089869-10089888 | None:intergenic | 55.0% |
| !! | AGGCCTTTGCAATGACGGGT+TGG | + | chr4.4:10090486-10090505 | MS.gene28109:intron | 55.0% |
| !! | CCTTTGCAATGACGGGTTGG+CGG | + | chr4.4:10090489-10090508 | MS.gene28109:CDS | 55.0% |
| ACTAGGCTATGCTGGTGGGG+AGG | + | chr4.4:10090758-10090777 | MS.gene28109:CDS | 60.0% | |
| AGCTGCCTGTAGGGTGGGAA+GGG | - | chr4.4:10091254-10091273 | None:intergenic | 60.0% | |
| CCCGTCATTGCAAAGGCCTG+CGG | - | chr4.4:10090485-10090504 | None:intergenic | 60.0% | |
| CCGCAGGCCTTTGCAATGAC+GGG | + | chr4.4:10090482-10090501 | MS.gene28109:intron | 60.0% | |
| CCGCCAACCCGTCATTGCAA+AGG | - | chr4.4:10090492-10090511 | None:intergenic | 60.0% | |
| CCGGCAGCCAAGCGAATAAC+AGG | - | chr4.4:10088593-10088612 | None:intergenic | 60.0% | |
| CTCTACAGCTGCCTGTAGGG+TGG | - | chr4.4:10091260-10091279 | None:intergenic | 60.0% | |
| TACACCCGCGGTTATTGCCG+AGG | + | chr4.4:10088628-10088647 | MS.gene28109:CDS | 60.0% | |
| ! | AGCAAAGCACCCCAGGCTTC+TGG | + | chr4.4:10090060-10090079 | MS.gene28109:CDS | 60.0% |
| CAGCTGCCTGTAGGGTGGGA+AGG | - | chr4.4:10091255-10091274 | None:intergenic | 65.0% | |
| GGCATCCCTTCCCACCCTAC+AGG | + | chr4.4:10091246-10091265 | MS.gene28109:CDS | 65.0% | |
| !! | GCAATGACGGGTTGGCGGCT+TGG | + | chr4.4:10090494-10090513 | MS.gene28109:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10088443 | 10091327 | 10088443 | ID=MS.gene28109 |
| chr4.4 | mRNA | 10088443 | 10091327 | 10088443 | ID=MS.gene28109.t1;Parent=MS.gene28109 |
| chr4.4 | exon | 10088443 | 10088649 | 10088443 | ID=MS.gene28109.t1.exon1;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10088443 | 10088649 | 10088443 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10088794 | 10088887 | 10088794 | ID=MS.gene28109.t1.exon2;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10088794 | 10088887 | 10088794 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10088982 | 10089085 | 10088982 | ID=MS.gene28109.t1.exon3;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10088982 | 10089085 | 10088982 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10089833 | 10090081 | 10089833 | ID=MS.gene28109.t1.exon4;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10089833 | 10090081 | 10089833 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10090177 | 10090290 | 10090177 | ID=MS.gene28109.t1.exon5;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10090177 | 10090290 | 10090177 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10090488 | 10090571 | 10090488 | ID=MS.gene28109.t1.exon6;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10090488 | 10090571 | 10090488 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10090705 | 10090875 | 10090705 | ID=MS.gene28109.t1.exon7;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10090705 | 10090875 | 10090705 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10090986 | 10091099 | 10090986 | ID=MS.gene28109.t1.exon8;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10090986 | 10091099 | 10090986 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| chr4.4 | exon | 10091187 | 10091327 | 10091187 | ID=MS.gene28109.t1.exon9;Parent=MS.gene28109.t1 |
| chr4.4 | CDS | 10091187 | 10091327 | 10091187 | ID=cds.MS.gene28109.t1;Parent=MS.gene28109.t1 |
| Gene Sequence |
| Protein sequence |
