Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28324.t1 | XP_024638645.1 | 91.7 | 686 | 43 | 1 | 1 | 686 | 1 | 672 | 0.00E+00 | 1172.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28324.t1 | G7JEV5 | 91.0 | 686 | 62 | 0 | 1 | 686 | 1 | 686 | 0.0e+00 | 1161.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056398 | MS.gene28324 | 0.966077 | 1.93E-125 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28324.t1 | MTR_4g068050 | 96.501 | 686 | 24 | 0 | 1 | 686 | 1 | 686 | 0.0 | 1352 |
| MS.gene28324.t1 | MTR_2g099095 | 61.676 | 728 | 204 | 16 | 1 | 685 | 1 | 696 | 0.0 | 762 |
| MS.gene28324.t1 | MTR_0050s0010 | 63.025 | 119 | 44 | 0 | 1 | 119 | 1 | 119 | 1.24e-47 | 176 |
| MS.gene28324.t1 | MTR_5g034370 | 57.025 | 121 | 51 | 1 | 1 | 120 | 1 | 121 | 2.41e-41 | 159 |
| MS.gene28324.t1 | MTR_4g112035 | 56.667 | 120 | 52 | 0 | 1 | 120 | 1 | 120 | 4.43e-40 | 157 |
| MS.gene28324.t1 | MTR_2g062300 | 31.692 | 325 | 177 | 11 | 369 | 673 | 254 | 553 | 1.11e-31 | 130 |
| MS.gene28324.t1 | MTR_2g062300 | 46.825 | 126 | 61 | 2 | 1 | 124 | 1 | 122 | 1.55e-26 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28324.t1 | AT1G08760 | 50.975 | 718 | 289 | 18 | 1 | 679 | 1 | 694 | 0.0 | 637 |
| MS.gene28324.t1 | AT3G14170 | 61.345 | 119 | 46 | 0 | 1 | 119 | 1 | 119 | 3.44e-45 | 169 |
| MS.gene28324.t1 | AT3G14170 | 34.831 | 89 | 58 | 0 | 384 | 472 | 250 | 338 | 1.81e-12 | 70.9 |
| MS.gene28324.t1 | AT3G14170 | 61.345 | 119 | 46 | 0 | 1 | 119 | 1 | 119 | 3.53e-45 | 169 |
| MS.gene28324.t1 | AT3G14170 | 34.831 | 89 | 58 | 0 | 384 | 472 | 251 | 339 | 1.81e-12 | 70.9 |
| MS.gene28324.t1 | AT4G13370 | 58.400 | 125 | 52 | 0 | 1 | 125 | 1 | 125 | 2.98e-42 | 163 |
| MS.gene28324.t1 | AT4G13370 | 27.609 | 297 | 143 | 5 | 382 | 677 | 413 | 638 | 1.39e-18 | 90.5 |
| MS.gene28324.t1 | AT1G23790 | 57.377 | 122 | 51 | 1 | 1 | 121 | 1 | 122 | 4.39e-41 | 157 |
| MS.gene28324.t1 | AT1G70340 | 57.500 | 120 | 50 | 1 | 1 | 119 | 1 | 120 | 1.27e-39 | 153 |
| MS.gene28324.t1 | AT3G19610 | 48.333 | 120 | 61 | 1 | 1 | 119 | 29 | 148 | 7.06e-36 | 144 |
| MS.gene28324.t1 | AT3G19610 | 27.336 | 289 | 149 | 8 | 390 | 673 | 335 | 567 | 1.81e-19 | 93.6 |
| MS.gene28324.t1 | AT2G31920 | 44.697 | 132 | 64 | 4 | 1 | 124 | 1 | 131 | 2.49e-25 | 111 |
| MS.gene28324.t1 | AT2G31920 | 26.623 | 308 | 178 | 10 | 376 | 679 | 284 | 547 | 1.67e-16 | 84.0 |
Find 135 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATCAAAAGATTGTTCT+TGG | 0.220021 | 4.4:+39083029 | MS.gene28324:CDS |
| TGAAACCTTGACAAAGTTTC+CGG | 0.253676 | 4.4:-39081456 | None:intergenic |
| GTTGTGATTCTTTCATTATC+TGG | 0.256643 | 4.4:-39082858 | None:intergenic |
| CCACTCCAAGAGTGGATTAA+AGG | 0.275711 | 4.4:+39083215 | MS.gene28324:CDS |
| CTTACTGTGCTACGAAATTC+AGG | 0.277895 | 4.4:-39080781 | None:intergenic |
| CTTAGAAGATGCCCTTGATT+TGG | 0.289921 | 4.4:-39080746 | None:intergenic |
| ATAGTTTGCTACAATGTCTT+AGG | 0.295406 | 4.4:+39082111 | MS.gene28324:CDS |
| AAATCATCCGCGCACTATTC+AGG | 0.311812 | 4.4:-39082797 | None:intergenic |
| CGTGGTGTTAGGCCTGTTCC+TGG | 0.317826 | 4.4:+39080175 | MS.gene28324:CDS |
| ATGGAAGTTAAGAATAATAA+AGG | 0.322833 | 4.4:+39080718 | MS.gene28324:CDS |
| TCTTCAGAAGCCGGACTTCC+CGG | 0.331048 | 4.4:+39081437 | MS.gene28324:CDS |
| TAGCAATGCTTCTGAGGTTA+AGG | 0.340241 | 4.4:+39080258 | MS.gene28324:CDS |
| TGATTCTCCAACACTTTCAT+TGG | 0.340325 | 4.4:-39080313 | None:intergenic |
| AGTTCCTTGTAAGGCTTGTT+TGG | 0.347179 | 4.4:-39083138 | None:intergenic |
| AAAATGGCAAATCTAGTTCC+TGG | 0.348238 | 4.4:+39079875 | None:intergenic |
| TTACTCTCGTAATCTTTAGA+AGG | 0.353943 | 4.4:-39081284 | None:intergenic |
| CACTTTCATTGGAGAGGACT+TGG | 0.357255 | 4.4:-39080302 | None:intergenic |
| TCCACTCTTGGAGTGGTTGT+TGG | 0.358763 | 4.4:-39083208 | None:intergenic |
| TCAATCAGAAATTTAGTTCA+AGG | 0.364637 | 4.4:+39080649 | MS.gene28324:CDS |
| ACGAAGCAAAGGAACTCTTT+TGG | 0.370193 | 4.4:+39081407 | MS.gene28324:CDS |
| GGAGATTTGTTTACAAATCA+AGG | 0.381180 | 4.4:+39080004 | MS.gene28324:CDS |
| ATTAGATCATCATGTTCATC+AGG | 0.391695 | 4.4:-39080076 | None:intergenic |
| TTCCGATTCTTCGTGGTGTT+AGG | 0.393778 | 4.4:+39080164 | MS.gene28324:CDS |
| CATTTCCTTTAATCCACTCT+TGG | 0.393945 | 4.4:-39083220 | None:intergenic |
| GGATGAGAGATTGGTGGATA+AGG | 0.407044 | 4.4:-39082943 | None:intergenic |
| AACACCAACCAAGTCCTCTA+AGG | 0.411554 | 4.4:+39081313 | MS.gene28324:CDS |
| CTTAGTGACAAGATTCAGTT+AGG | 0.416620 | 4.4:+39080100 | MS.gene28324:CDS |
| GACAAAGTTTCCGGGAAGTC+CGG | 0.419326 | 4.4:-39081447 | None:intergenic |
| AGTTAACGGTGATGGAACTA+TGG | 0.422657 | 4.4:+39081367 | MS.gene28324:CDS |
| GAATTACTTGTAGTTGAAAC+AGG | 0.432215 | 4.4:-39083005 | None:intergenic |
| GAGAATTTCTCAAAAGAAGT+AGG | 0.433004 | 4.4:-39080499 | None:intergenic |
| CTTCTGAGGTTAAGGTTAAG+AGG | 0.436051 | 4.4:+39080266 | MS.gene28324:CDS |
| CCTTCATCTATTGCGAAGCT+TGG | 0.438351 | 4.4:+39081527 | MS.gene28324:CDS |
| CTAAGGCGTTGCGGAAAAGC+TGG | 0.438960 | 4.4:+39080686 | MS.gene28324:CDS |
| AACAGAAAAGGATGAGAGAT+TGG | 0.439259 | 4.4:-39082952 | None:intergenic |
| TGTTTGGAATTAGCTACTGC+TGG | 0.443115 | 4.4:-39083122 | None:intergenic |
| GAAACCTTGACAAAGTTTCC+GGG | 0.443615 | 4.4:-39081455 | None:intergenic |
| TTTGCGCGGAGTTCCTTGTA+AGG | 0.448101 | 4.4:-39083147 | None:intergenic |
| GGGGTGGTGGAGACGGGAAA+GGG | 0.448470 | 4.4:+39080580 | MS.gene28324:CDS |
| TTAGTTGCAACAATATCTTC+AGG | 0.451042 | 4.4:-39080220 | None:intergenic |
| ATTCTGAGGGTTATGTTCCT+TGG | 0.451057 | 4.4:-39082742 | None:intergenic |
| AAATCTATAAAGAAAGTTAA+CGG | 0.457905 | 4.4:+39081353 | MS.gene28324:CDS |
| TGCAATTGCGATCGCGAGAC+TGG | 0.462113 | 4.4:+39083276 | MS.gene28324:CDS |
| ATAAAGGGACATCCAAATCA+AGG | 0.464165 | 4.4:+39080734 | MS.gene28324:CDS |
| CTTCATCTATTGCGAAGCTT+GGG | 0.468822 | 4.4:+39081528 | MS.gene28324:CDS |
| GGAAAGAAATCTTCAGAAGC+CGG | 0.471468 | 4.4:+39081428 | MS.gene28324:CDS |
| GGCCTAACACCACGAAGAAT+CGG | 0.472446 | 4.4:-39080166 | None:intergenic |
| TTATCTGGAGATGAACCATC+TGG | 0.472677 | 4.4:-39082843 | None:intergenic |
| AACTTAAAAGCGTCAACGAT+TGG | 0.476478 | 4.4:+39083384 | MS.gene28324:CDS |
| TCGCCTGTTCCGATTCTTCG+TGG | 0.478185 | 4.4:+39080157 | MS.gene28324:CDS |
| CTAAATTAACCGCCGCATCA+AGG | 0.478940 | 4.4:-39083244 | None:intergenic |
| CAAGCATGTCTCCCAGGAAC+AGG | 0.480995 | 4.4:-39080187 | None:intergenic |
| AACTGATCAATTGTATTCTG+AGG | 0.483206 | 4.4:-39082756 | None:intergenic |
| CATCTATTGCGAAGCTTGGG+AGG | 0.483470 | 4.4:+39081531 | MS.gene28324:CDS |
| TGTAGTTGAAACAGGAAGCT+TGG | 0.485663 | 4.4:-39082997 | None:intergenic |
| CTCTCGGTTATAAACAGAAA+AGG | 0.486637 | 4.4:-39082964 | None:intergenic |
| GACGCTTCATTGAAAGCTCA+TGG | 0.489464 | 4.4:+39083089 | MS.gene28324:CDS |
| TAGCAACTAGTAGGTGAAGA+AGG | 0.490380 | 4.4:-39080469 | None:intergenic |
| TCAAACAATGGTCAAATAGC+AGG | 0.495685 | 4.4:+39083350 | MS.gene28324:CDS |
| CTCCAACACTTTCATTGGAG+AGG | 0.497923 | 4.4:-39080308 | None:intergenic |
| CCAAGCTTCGCAATAGATGA+AGG | 0.500292 | 4.4:-39081527 | None:intergenic |
| GTTCGCGGAGTTAGTCCTCT+CGG | 0.502784 | 4.4:+39080604 | MS.gene28324:CDS |
| TGGAAGTTAAGAATAATAAA+GGG | 0.503860 | 4.4:+39080719 | MS.gene28324:CDS |
| TTCTGGTGTTCCAGACTCCT+AGG | 0.504156 | 4.4:+39081237 | MS.gene28324:intron |
| TGACAGAAGCAAGTGTTCAA+TGG | 0.504746 | 4.4:+39081495 | MS.gene28324:CDS |
| GGATAGGCTGATTGCTAAGG+TGG | 0.505127 | 4.4:+39080558 | MS.gene28324:CDS |
| AAATCTCCACCTGCTAGTGC+TGG | 0.505213 | 4.4:-39079989 | None:intergenic |
| GGCAAAGAATAGCAACTAGT+AGG | 0.507800 | 4.4:-39080478 | None:intergenic |
| AAATGGCAAATCTAGTTCCT+GGG | 0.508006 | 4.4:+39079876 | None:intergenic |
| CCTTTAATCCACTCTTGGAG+TGG | 0.512337 | 4.4:-39083215 | None:intergenic |
| CTAACTGAATCTTGTCACTA+AGG | 0.514275 | 4.4:-39080099 | None:intergenic |
| GCACAGAGATGCAGCACAGA+TGG | 0.515070 | 4.4:+39082052 | MS.gene28324:CDS |
| TTAGTTCAAGGAATTGAACT+TGG | 0.515121 | 4.4:+39080661 | MS.gene28324:CDS |
| TAAAAGCGTCAACGATTGGT+TGG | 0.515601 | 4.4:+39083388 | MS.gene28324:CDS |
| AAGCAACAAGGAAATATCAA+TGG | 0.517246 | 4.4:+39080532 | MS.gene28324:CDS |
| TCTTCCTTAGAGGACTTGGT+TGG | 0.518185 | 4.4:-39081317 | None:intergenic |
| ATAAAGAAAGTTAACGGTGA+TGG | 0.518959 | 4.4:+39081359 | MS.gene28324:CDS |
| ACACCACGAAGAATCGGAAC+AGG | 0.519947 | 4.4:-39080160 | None:intergenic |
| TTGGACAGTGATGGAGACAT+TGG | 0.524679 | 4.4:+39083323 | MS.gene28324:CDS |
| AATTCCAAACAAGCCTTACA+AGG | 0.526341 | 4.4:+39083134 | MS.gene28324:CDS |
| GAGACGGGAAAGGGTGTTCG+CGG | 0.527317 | 4.4:+39080589 | MS.gene28324:CDS |
| AGCATTGTTCCAGCACTAGC+AGG | 0.527702 | 4.4:+39079980 | MS.gene28324:CDS |
| AGGAATTGAACTTGGTGCTA+AGG | 0.528575 | 4.4:+39080669 | MS.gene28324:CDS |
| AAGAAAAGACAACGAAGCAA+AGG | 0.535441 | 4.4:+39081396 | MS.gene28324:CDS |
| TTCGCGGAGTTAGTCCTCTC+GGG | 0.536295 | 4.4:+39080605 | MS.gene28324:CDS |
| ACAAGTAGATAAGAAATCAA+TGG | 0.541333 | 4.4:+39080342 | MS.gene28324:CDS |
| CAAGGAACTCCGCGCAAACA+AGG | 0.543841 | 4.4:+39083152 | MS.gene28324:CDS |
| AACGATTGGTTGGATGAGAT+AGG | 0.546451 | 4.4:+39083398 | MS.gene28324:CDS |
| CCTGGGAGACATGCTTGTGT+TGG | 0.547891 | 4.4:+39080193 | MS.gene28324:CDS |
| ATGAACACAGACATAAAAGT+TGG | 0.550757 | 4.4:+39079923 | MS.gene28324:CDS |
| GAAAAGCTGGGAAGGGAACA+TGG | 0.551231 | 4.4:+39080699 | MS.gene28324:CDS |
| ACTGATCAATTGTATTCTGA+GGG | 0.552570 | 4.4:-39082755 | None:intergenic |
| GTGGTGTTAGGCCTGTTCCT+GGG | 0.553445 | 4.4:+39080176 | MS.gene28324:CDS |
| ATTGTTGCAACTAACTCACT+TGG | 0.554897 | 4.4:+39080229 | MS.gene28324:CDS |
| AGAAAAGGATGAGAGATTGG+TGG | 0.555800 | 4.4:-39082949 | None:intergenic |
| GAAATATCAATGGAGTGGAT+AGG | 0.557954 | 4.4:+39080542 | MS.gene28324:CDS |
| GTCCTCTCCAATGAAAGTGT+TGG | 0.558109 | 4.4:+39080306 | MS.gene28324:CDS |
| CTTTCTAAAACCATTCCAGA+TGG | 0.563456 | 4.4:+39082828 | MS.gene28324:CDS |
| ACAGGAAGCTTGGACAATTG+AGG | 0.563685 | 4.4:-39082987 | None:intergenic |
| GCTTGGACAATTGAGGCTCT+CGG | 0.566507 | 4.4:-39082980 | None:intergenic |
| ATCTATTGCGAAGCTTGGGA+GGG | 0.567095 | 4.4:+39081532 | MS.gene28324:CDS |
| GACATTGGTTTGTCAAACAA+TGG | 0.568828 | 4.4:+39083338 | MS.gene28324:CDS |
| ATAGGCTGATTGCTAAGGTG+GGG | 0.576897 | 4.4:+39080560 | MS.gene28324:CDS |
| TAGGCTGATTGCTAAGGTGG+GGG | 0.578325 | 4.4:+39080561 | MS.gene28324:CDS |
| TCCAACAACCACTCCAAGAG+TGG | 0.580092 | 4.4:+39083207 | MS.gene28324:CDS |
| TGGAGATGAACCATCTGGAA+TGG | 0.580483 | 4.4:-39082838 | None:intergenic |
| GATTGGTGGATAAGGCAGCT+TGG | 0.581530 | 4.4:-39082935 | None:intergenic |
| CTCGGGAAGAGAATTGCAGT+TGG | 0.583302 | 4.4:+39080622 | MS.gene28324:CDS |
| CCAACACAAGCATGTCTCCC+AGG | 0.583666 | 4.4:-39080193 | None:intergenic |
| AACTTGGTGCTAAGGCGTTG+CGG | 0.593967 | 4.4:+39080677 | MS.gene28324:CDS |
| TAAAGGGACATCCAAATCAA+GGG | 0.597215 | 4.4:+39080735 | MS.gene28324:CDS |
| ACAAGGAAATATCAATGGAG+TGG | 0.598845 | 4.4:+39080537 | MS.gene28324:CDS |
| AACACAGACATAAAAGTTGG+TGG | 0.601218 | 4.4:+39079926 | MS.gene28324:CDS |
| GCGTTGCGGAAAAGCTGGGA+AGG | 0.605950 | 4.4:+39080691 | MS.gene28324:CDS |
| AGCAACTGAGGCTATGCAAG+AGG | 0.606268 | 4.4:+39082076 | MS.gene28324:CDS |
| ATTAACTTTAGTAGCACCCC+AGG | 0.608080 | 4.4:-39079893 | None:intergenic |
| AGGAAATGACCTTGATGCGG+CGG | 0.609502 | 4.4:+39083235 | MS.gene28324:CDS |
| CGATCGCAATTGCAGCATGT+CGG | 0.611032 | 4.4:-39083267 | None:intergenic |
| ATTGCATCACCTTGTTTGCG+CGG | 0.616347 | 4.4:-39083161 | None:intergenic |
| AGCACAGATGGCAGCAACTG+AGG | 0.619137 | 4.4:+39082064 | MS.gene28324:CDS |
| ACTTCCCGGAAACTTTGTCA+AGG | 0.621117 | 4.4:+39081451 | MS.gene28324:CDS |
| TAAGGCGTTGCGGAAAAGCT+GGG | 0.622391 | 4.4:+39080687 | MS.gene28324:CDS |
| GATAGGCTGATTGCTAAGGT+GGG | 0.622398 | 4.4:+39080559 | MS.gene28324:CDS |
| CAAGCTTCGCAATAGATGAA+GGG | 0.632626 | 4.4:-39081526 | None:intergenic |
| TAGTTGAAGACTCATTGGAA+TGG | 0.635336 | 4.4:-39084498 | None:intergenic |
| CGTTGCGGAAAAGCTGGGAA+GGG | 0.647668 | 4.4:+39080692 | MS.gene28324:CDS |
| AGAGCTAAGTAATTCTGCCA+AGG | 0.648404 | 4.4:+39082725 | MS.gene28324:CDS |
| AGTGGATAGGCTGATTGCTA+AGG | 0.655516 | 4.4:+39080555 | MS.gene28324:CDS |
| TCTAATGGAGTTAAGCAACA+AGG | 0.656865 | 4.4:+39080520 | MS.gene28324:CDS |
| AATGGCAAATCTAGTTCCTG+GGG | 0.665627 | 4.4:+39079877 | None:intergenic |
| TTAGATCATCATGTTCATCA+GGG | 0.666720 | 4.4:-39080075 | None:intergenic |
| TAAAGGAAATGACCTTGATG+CGG | 0.678002 | 4.4:+39083232 | MS.gene28324:CDS |
| ACACTAGCCTGAATAGTGCG+CGG | 0.681954 | 4.4:+39082790 | MS.gene28324:CDS |
| ATTGTTCCAGCACTAGCAGG+TGG | 0.697945 | 4.4:+39079983 | MS.gene28324:CDS |
| ACTGCAATTCTCTTCCCGAG+AGG | 0.722826 | 4.4:-39080619 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTAAAATAACAATTAAAA+AGG | - | chr4.4:39084187-39084206 | None:intergenic | 10.0% |
| !! | AAAGATAACATTAAATTTAC+TGG | - | chr4.4:39084315-39084334 | None:intergenic | 15.0% |
| !! | AAATCTATAAAGAAAGTTAA+CGG | + | chr4.4:39081353-39081372 | MS.gene28324:CDS | 15.0% |
| !! | ATGTTTACAAAACTATAAAA+GGG | + | chr4.4:39083980-39083999 | MS.gene28324:intron | 15.0% |
| !! | ATTTATGTACAAAAAAAAAG+TGG | - | chr4.4:39083715-39083734 | None:intergenic | 15.0% |
| !! | CATAATATAACAATATTTCA+CGG | + | chr4.4:39084078-39084097 | MS.gene28324:intron | 15.0% |
| !! | TAAAATAAGTAAATACAAAC+AGG | - | chr4.4:39080824-39080843 | None:intergenic | 15.0% |
| !!! | AAAAATACATTTCACTATTT+TGG | - | chr4.4:39084218-39084237 | None:intergenic | 15.0% |
| !! | AACAATTAAAAAGGAACAAA+AGG | - | chr4.4:39084178-39084197 | None:intergenic | 20.0% |
| !! | AAGATATGCATTACTAATAA+AGG | + | chr4.4:39082232-39082251 | MS.gene28324:intron | 20.0% |
| !! | AAGTATCAACATTATATCTT+CGG | - | chr4.4:39082337-39082356 | None:intergenic | 20.0% |
| !! | AGTAAGTTTATTCACAATTT+AGG | + | chr4.4:39080798-39080817 | MS.gene28324:intron | 20.0% |
| !! | ATATTGGTAGATTAAAATGA+GGG | - | chr4.4:39084262-39084281 | None:intergenic | 20.0% |
| !! | ATGGAAGTTAAGAATAATAA+AGG | + | chr4.4:39080718-39080737 | MS.gene28324:CDS | 20.0% |
| !! | CATACAACATTCATATTATT+AGG | + | chr4.4:39081860-39081879 | MS.gene28324:intron | 20.0% |
| !! | CATGTTTACAAAACTATAAA+AGG | + | chr4.4:39083979-39083998 | MS.gene28324:intron | 20.0% |
| !! | TATATTGGTAGATTAAAATG+AGG | - | chr4.4:39084263-39084282 | None:intergenic | 20.0% |
| !! | TATTGTAATCTAATCAATGT+AGG | + | chr4.4:39082434-39082453 | MS.gene28324:intron | 20.0% |
| !! | TGGAAGTTAAGAATAATAAA+GGG | + | chr4.4:39080719-39080738 | MS.gene28324:CDS | 20.0% |
| !! | TTTATTAGTAATGCATATCT+TGG | - | chr4.4:39082233-39082252 | None:intergenic | 20.0% |
| !!! | ATTGTTTGTTGAGAAATTTT+TGG | + | chr4.4:39083304-39083323 | MS.gene28324:CDS | 20.0% |
| !!! | TTTTTTAAAGAAATTGGGTA+AGG | - | chr4.4:39082605-39082624 | None:intergenic | 20.0% |
| !!! | TTTTTTGTACATAAATCCAT+GGG | + | chr4.4:39083719-39083738 | MS.gene28324:intron | 20.0% |
| !!! | TTTTTTTGTACATAAATCCA+TGG | + | chr4.4:39083718-39083737 | MS.gene28324:intron | 20.0% |
| ! | AACAATAAATGTGAAATGTG+AGG | + | chr4.4:39083787-39083806 | MS.gene28324:intron | 25.0% |
| ! | ACAAGTAGATAAGAAATCAA+TGG | + | chr4.4:39080342-39080361 | MS.gene28324:CDS | 25.0% |
| ! | ATGTGATTGGCATATAAAAA+GGG | - | chr4.4:39083950-39083969 | None:intergenic | 25.0% |
| ! | CAAAATCAAAAGATTGTTCT+TGG | + | chr4.4:39083029-39083048 | MS.gene28324:CDS | 25.0% |
| ! | CATAAACCTTAAGTCAATAA+CGG | - | chr4.4:39081919-39081938 | None:intergenic | 25.0% |
| ! | GCATACAATAACTTTGTAAA+AGG | - | chr4.4:39083828-39083847 | None:intergenic | 25.0% |
| ! | GTATACAACATTCATATTGT+TGG | + | chr4.4:39081892-39081911 | MS.gene28324:intron | 25.0% |
| ! | TAATGAATAATGAATCCAGT+AGG | - | chr4.4:39081956-39081975 | None:intergenic | 25.0% |
| ! | TAGCTTAAGATGCATTATTA+TGG | + | chr4.4:39083637-39083656 | MS.gene28324:intron | 25.0% |
| ! | TAGTTGTATCATTAGTTAGT+TGG | + | chr4.4:39081606-39081625 | MS.gene28324:intron | 25.0% |
| ! | TATAAGAAGTGATTATGCAT+AGG | - | chr4.4:39080993-39081012 | None:intergenic | 25.0% |
| ! | TGAAACATATAGTGAAATTC+AGG | + | chr4.4:39082465-39082484 | MS.gene28324:intron | 25.0% |
| !! | AAATCAAGGCTTTTATGTTA+AGG | + | chr4.4:39080018-39080037 | MS.gene28324:CDS | 25.0% |
| !! | AAGATATTTCTGACACTATT+TGG | + | chr4.4:39082679-39082698 | MS.gene28324:intron | 25.0% |
| !! | AGCATTAAATACTTTTGTTG+GGG | - | chr4.4:39081655-39081674 | None:intergenic | 25.0% |
| !! | ATGATTAGTTGAAAAAGAAC+CGG | + | chr4.4:39084123-39084142 | MS.gene28324:intron | 25.0% |
| !! | GAGCATTAAATACTTTTGTT+GGG | - | chr4.4:39081656-39081675 | None:intergenic | 25.0% |
| !! | GAGTTCTGATTATTTATTTG+GGG | + | chr4.4:39083763-39083782 | MS.gene28324:intron | 25.0% |
| !! | GATAAGAAATCAATGGTTTT+AGG | + | chr4.4:39080349-39080368 | MS.gene28324:CDS | 25.0% |
| !! | GATTAAAATGAGGGTATAAT+AGG | - | chr4.4:39084253-39084272 | None:intergenic | 25.0% |
| !! | GGAGTTCTGATTATTTATTT+GGG | + | chr4.4:39083762-39083781 | MS.gene28324:intron | 25.0% |
| !! | TCAATCAGAAATTTAGTTCA+AGG | + | chr4.4:39080649-39080668 | MS.gene28324:CDS | 25.0% |
| !! | TGGAGTTCTGATTATTTATT+TGG | + | chr4.4:39083761-39083780 | MS.gene28324:intron | 25.0% |
| !! | TTAAAACAAATCACCTTTTG+TGG | + | chr4.4:39082279-39082298 | MS.gene28324:intron | 25.0% |
| !! | TTTTAACAAGATTCACTTTC+TGG | + | chr4.4:39081220-39081239 | MS.gene28324:intron | 25.0% |
| !!! | AGACGATTTTAAGTTGTTTA+TGG | + | chr4.4:39082392-39082411 | MS.gene28324:intron | 25.0% |
| !!! | AGTATTTTGATTTGAATGGA+AGG | - | chr4.4:39084012-39084031 | None:intergenic | 25.0% |
| !!! | ATTTTTTGCATATCCACAAA+AGG | - | chr4.4:39082295-39082314 | None:intergenic | 25.0% |
| !!! | TCTTTTGAGAAATTCTCTAA+TGG | + | chr4.4:39080505-39080524 | MS.gene28324:CDS | 25.0% |
| !!! | TTTTTTTTTCACATCTTGAC+AGG | + | chr4.4:39082019-39082038 | MS.gene28324:intron | 25.0% |
| AAACAAAGAAAAGTCCAACA+AGG | - | chr4.4:39081119-39081138 | None:intergenic | 30.0% | |
| AACTGATCAATTGTATTCTG+AGG | - | chr4.4:39082759-39082778 | None:intergenic | 30.0% | |
| AAGCAACAAGGAAATATCAA+TGG | + | chr4.4:39080532-39080551 | MS.gene28324:CDS | 30.0% | |
| AAGCTGAAACTGCAAAAATA+AGG | - | chr4.4:39081577-39081596 | None:intergenic | 30.0% | |
| AATTCAAACTCTGTCTCTTT+AGG | - | chr4.4:39082524-39082543 | None:intergenic | 30.0% | |
| ACTGATCAATTGTATTCTGA+GGG | - | chr4.4:39082758-39082777 | None:intergenic | 30.0% | |
| ATAAAGAAAGTTAACGGTGA+TGG | + | chr4.4:39081359-39081378 | MS.gene28324:CDS | 30.0% | |
| ATAGGATCGAGTAAAAATGA+GGG | + | chr4.4:39083416-39083435 | MS.gene28324:CDS | 30.0% | |
| ATGAACACAGACATAAAAGT+TGG | + | chr4.4:39079923-39079942 | MS.gene28324:CDS | 30.0% | |
| ATTAGATCATCATGTTCATC+AGG | - | chr4.4:39080079-39080098 | None:intergenic | 30.0% | |
| CAACATTATATCTTCGGTAT+CGG | - | chr4.4:39082331-39082350 | None:intergenic | 30.0% | |
| CTTAACCGAGTTAAAAAACA+TGG | - | chr4.4:39081728-39081747 | None:intergenic | 30.0% | |
| CTTAAGATGCATTATTATGG+TGG | + | chr4.4:39083640-39083659 | MS.gene28324:intron | 30.0% | |
| CTTAATTGATACGTTTATCC+AGG | + | chr4.4:39081055-39081074 | MS.gene28324:intron | 30.0% | |
| CTTATCATTGATGAAACATG+TGG | + | chr4.4:39082354-39082373 | MS.gene28324:intron | 30.0% | |
| GAATTACTTGTAGTTGAAAC+AGG | - | chr4.4:39083008-39083027 | None:intergenic | 30.0% | |
| GAGAATTTCTCAAAAGAAGT+AGG | - | chr4.4:39080502-39080521 | None:intergenic | 30.0% | |
| GATCTTTGTGTTTCTTAATC+TGG | + | chr4.4:39082158-39082177 | MS.gene28324:intron | 30.0% | |
| GATGTGATTGGCATATAAAA+AGG | - | chr4.4:39083951-39083970 | None:intergenic | 30.0% | |
| GGAAGATGTTTAAACATCTA+AGG | - | chr4.4:39082646-39082665 | None:intergenic | 30.0% | |
| GTTGTGATTCTTTCATTATC+TGG | - | chr4.4:39082861-39082880 | None:intergenic | 30.0% | |
| TATCAATCAAATGCAAGCAA+AGG | + | chr4.4:39083913-39083932 | MS.gene28324:intron | 30.0% | |
| TCAAAGTTGTTCAAAAAGAC+AGG | - | chr4.4:39081081-39081100 | None:intergenic | 30.0% | |
| TGCAAAGAACAGGAATATAT+TGG | - | chr4.4:39084278-39084297 | None:intergenic | 30.0% | |
| TTACTCTCGTAATCTTTAGA+AGG | - | chr4.4:39081287-39081306 | None:intergenic | 30.0% | |
| TTAGATCATCATGTTCATCA+GGG | - | chr4.4:39080078-39080097 | None:intergenic | 30.0% | |
| TTAGTTCAAGGAATTGAACT+TGG | + | chr4.4:39080661-39080680 | MS.gene28324:CDS | 30.0% | |
| TTAGTTGCAACAATATCTTC+AGG | - | chr4.4:39080223-39080242 | None:intergenic | 30.0% | |
| ! | ATTATGCATAGGCTATTTCA+TGG | - | chr4.4:39080982-39081001 | None:intergenic | 30.0% |
| ! | CGAGCATTAAATACTTTTGT+TGG | - | chr4.4:39081657-39081676 | None:intergenic | 30.0% |
| ! | CTAATCATGAATGCAAGTTT+TGG | - | chr4.4:39084111-39084130 | None:intergenic | 30.0% |
| ! | GCATGACAATTGATTCAAAT+GGG | - | chr4.4:39081810-39081829 | None:intergenic | 30.0% |
| ! | GGAGATTTGTTTACAAATCA+AGG | + | chr4.4:39080004-39080023 | MS.gene28324:CDS | 30.0% |
| ! | TCTTAATCTGGTTGAGATTT+TGG | + | chr4.4:39082170-39082189 | MS.gene28324:intron | 30.0% |
| ! | TGCATGACAATTGATTCAAA+TGG | - | chr4.4:39081811-39081830 | None:intergenic | 30.0% |
| !! | ATAGTTTGCTACAATGTCTT+AGG | + | chr4.4:39082111-39082130 | MS.gene28324:CDS | 30.0% |
| !! | CTTATTTCTATAAGCACTCT+AGG | + | chr4.4:39080929-39080948 | MS.gene28324:intron | 30.0% |
| !! | GAATTTTCGAGGACTAAAAT+TGG | - | chr4.4:39083062-39083081 | None:intergenic | 30.0% |
| !!! | AATCTTGTTTTCTTCCTTAG+AGG | - | chr4.4:39081330-39081349 | None:intergenic | 30.0% |
| !!! | ATCTGGAATGGTTTTAGAAA+GGG | - | chr4.4:39082829-39082848 | None:intergenic | 30.0% |
| !!! | CATTGCCATGTTTTTTAACT+CGG | + | chr4.4:39081720-39081739 | MS.gene28324:intron | 30.0% |
| !!! | GGCAAGTATTTTGATTTGAA+TGG | - | chr4.4:39084016-39084035 | None:intergenic | 30.0% |
| !!! | TGTTGTTGATTTTGTGAAGA+AGG | + | chr4.4:39080402-39080421 | MS.gene28324:CDS | 30.0% |
| AACACAGACATAAAAGTTGG+TGG | + | chr4.4:39079926-39079945 | MS.gene28324:CDS | 35.0% | |
| AACAGAAAAGGATGAGAGAT+TGG | - | chr4.4:39082955-39082974 | None:intergenic | 35.0% | |
| AAGAAAAGACAACGAAGCAA+AGG | + | chr4.4:39081396-39081415 | MS.gene28324:CDS | 35.0% | |
| AATTCCAAACAAGCCTTACA+AGG | + | chr4.4:39083134-39083153 | MS.gene28324:CDS | 35.0% | |
| ACAAAAACTTGCAGCTTCTT+GGG | + | chr4.4:39082911-39082930 | MS.gene28324:CDS | 35.0% | |
| ACAAGGAAATATCAATGGAG+TGG | + | chr4.4:39080537-39080556 | MS.gene28324:CDS | 35.0% | |
| ACCGATCAACAAAAACAAAC+TGG | - | chr4.4:39080126-39080145 | None:intergenic | 35.0% | |
| AGTCTATCAATTGTCTCTAC+CGG | - | chr4.4:39083458-39083477 | None:intergenic | 35.0% | |
| AGTTTGAATTTCCTCAGGAA+CGG | + | chr4.4:39082534-39082553 | MS.gene28324:intron | 35.0% | |
| ATAAAGGGACATCCAAATCA+AGG | + | chr4.4:39080734-39080753 | MS.gene28324:CDS | 35.0% | |
| ATGATTGTGAGTCAGAAGTA+AGG | - | chr4.4:39083535-39083554 | None:intergenic | 35.0% | |
| ATTGTTGCAACTAACTCACT+TGG | + | chr4.4:39080229-39080248 | MS.gene28324:CDS | 35.0% | |
| CATGCTTCTTAAGATGTGAT+TGG | - | chr4.4:39083963-39083982 | None:intergenic | 35.0% | |
| CATTTCCTTTAATCCACTCT+TGG | - | chr4.4:39083223-39083242 | None:intergenic | 35.0% | |
| CTAACTGAATCTTGTCACTA+AGG | - | chr4.4:39080102-39080121 | None:intergenic | 35.0% | |
| CTCTCGGTTATAAACAGAAA+AGG | - | chr4.4:39082967-39082986 | None:intergenic | 35.0% | |
| CTGCAAGTTCAAATTTGAAC+CGG | - | chr4.4:39084145-39084164 | None:intergenic | 35.0% | |
| CTTAGTGACAAGATTCAGTT+AGG | + | chr4.4:39080100-39080119 | MS.gene28324:CDS | 35.0% | |
| GAAATATCAATGGAGTGGAT+AGG | + | chr4.4:39080542-39080561 | MS.gene28324:CDS | 35.0% | |
| GATAGGATCGAGTAAAAATG+AGG | + | chr4.4:39083415-39083434 | MS.gene28324:CDS | 35.0% | |
| GTCAGAAATATCTTGAGTAG+TGG | - | chr4.4:39082673-39082692 | None:intergenic | 35.0% | |
| TAAAGGAAATGACCTTGATG+CGG | + | chr4.4:39083232-39083251 | MS.gene28324:CDS | 35.0% | |
| TAAAGGGACATCCAAATCAA+GGG | + | chr4.4:39080735-39080754 | MS.gene28324:CDS | 35.0% | |
| TACATAAATCCATGGGTTTG+AGG | + | chr4.4:39083726-39083745 | MS.gene28324:intron | 35.0% | |
| TAGAGACAATTGATAGACTC+AGG | + | chr4.4:39083459-39083478 | MS.gene28324:intron | 35.0% | |
| TAGGATCGAGTAAAAATGAG+GGG | + | chr4.4:39083417-39083436 | MS.gene28324:CDS | 35.0% | |
| TCAAACAATGGTCAAATAGC+AGG | + | chr4.4:39083350-39083369 | MS.gene28324:CDS | 35.0% | |
| TCACAATCATCAGAGATCAA+AGG | + | chr4.4:39083545-39083564 | MS.gene28324:intron | 35.0% | |
| TCTAATGGAGTTAAGCAACA+AGG | + | chr4.4:39080520-39080539 | MS.gene28324:CDS | 35.0% | |
| TGAAACCTTGACAAAGTTTC+CGG | - | chr4.4:39081459-39081478 | None:intergenic | 35.0% | |
| TGATTCTCCAACACTTTCAT+TGG | - | chr4.4:39080316-39080335 | None:intergenic | 35.0% | |
| TGATTGTGAGTCAGAAGTAA+GGG | - | chr4.4:39083534-39083553 | None:intergenic | 35.0% | |
| ! | CTCTGTCTCTTTAGGTTATA+AGG | - | chr4.4:39082516-39082535 | None:intergenic | 35.0% |
| ! | GAGTTTGAGATAATACCTAC+TGG | + | chr4.4:39081938-39081957 | MS.gene28324:intron | 35.0% |
| ! | GTTTGAGGTATAGACATAGT+TGG | + | chr4.4:39083741-39083760 | MS.gene28324:intron | 35.0% |
| ! | TTTTCTTAGCAATGCTTCTG+AGG | + | chr4.4:39080252-39080271 | MS.gene28324:CDS | 35.0% |
| !! | AACTTAAAAGCGTCAACGAT+TGG | + | chr4.4:39083384-39083403 | MS.gene28324:CDS | 35.0% |
| !! | CTTTCTAAAACCATTCCAGA+TGG | + | chr4.4:39082828-39082847 | MS.gene28324:CDS | 35.0% |
| !! | GACATTGGTTTGTCAAACAA+TGG | + | chr4.4:39083338-39083357 | MS.gene28324:CDS | 35.0% |
| !! | GAGAAATTTTTGGACAGTGA+TGG | + | chr4.4:39083314-39083333 | MS.gene28324:CDS | 35.0% |
| !!! | AATTCTTTTTCAAGCAACGC+AGG | - | chr4.4:39084046-39084065 | None:intergenic | 35.0% |
| !!! | CATCTGGAATGGTTTTAGAA+AGG | - | chr4.4:39082830-39082849 | None:intergenic | 35.0% |
| !!! | GCCAGTTTGTTTTTGTTGAT+CGG | + | chr4.4:39080122-39080141 | MS.gene28324:CDS | 35.0% |
| !!! | TGTTGGACTAGTTGCTTTTT+TGG | - | chr4.4:39083194-39083213 | None:intergenic | 35.0% |
| AAGAAAAGTCCAACAAGGTC+TGG | - | chr4.4:39081114-39081133 | None:intergenic | 40.0% | |
| AATATCTTGAGTAGTGGCAG+AGG | - | chr4.4:39082667-39082686 | None:intergenic | 40.0% | |
| AGAAAAGGATGAGAGATTGG+TGG | - | chr4.4:39082952-39082971 | None:intergenic | 40.0% | |
| AGACAGTTTGGTAGAGCTTA+TGG | + | chr4.4:39080871-39080890 | MS.gene28324:intron | 40.0% | |
| AGAGCTAAGTAATTCTGCCA+AGG | + | chr4.4:39082725-39082744 | MS.gene28324:CDS | 40.0% | |
| AGGATCGAGTAAAAATGAGG+GGG | + | chr4.4:39083418-39083437 | MS.gene28324:CDS | 40.0% | |
| ATGTCTATACCTCAAACCCA+TGG | - | chr4.4:39083738-39083757 | None:intergenic | 40.0% | |
| ATTAACTTTAGTAGCACCCC+AGG | - | chr4.4:39079896-39079915 | None:intergenic | 40.0% | |
| CAAGCTTCGCAATAGATGAA+GGG | - | chr4.4:39081529-39081548 | None:intergenic | 40.0% | |
| CTTACTGTGCTACGAAATTC+AGG | - | chr4.4:39080784-39080803 | None:intergenic | 40.0% | |
| CTTAGAAGATGCCCTTGATT+TGG | - | chr4.4:39080749-39080768 | None:intergenic | 40.0% | |
| CTTCATCTATTGCGAAGCTT+GGG | + | chr4.4:39081528-39081547 | MS.gene28324:CDS | 40.0% | |
| GAAACCTTGACAAAGTTTCC+GGG | - | chr4.4:39081458-39081477 | None:intergenic | 40.0% | |
| GACAAAAACTTGCAGCTTCT+TGG | + | chr4.4:39082910-39082929 | MS.gene28324:CDS | 40.0% | |
| GACAGAGTTTGAATTTCCTC+AGG | + | chr4.4:39082529-39082548 | MS.gene28324:intron | 40.0% | |
| GATGATGAGTCATAACAGAC+AGG | - | chr4.4:39081773-39081792 | None:intergenic | 40.0% | |
| GATGCATTATTATGGTGGCT+TGG | + | chr4.4:39083645-39083664 | MS.gene28324:intron | 40.0% | |
| GGAAAGAAATCTTCAGAAGC+CGG | + | chr4.4:39081428-39081447 | MS.gene28324:CDS | 40.0% | |
| GGCAAAGAATAGCAACTAGT+AGG | - | chr4.4:39080481-39080500 | None:intergenic | 40.0% | |
| GTCATAACAGACAGGATCTT+TGG | - | chr4.4:39081765-39081784 | None:intergenic | 40.0% | |
| TAAGCACTTGTGAGACAGTT+TGG | + | chr4.4:39080859-39080878 | MS.gene28324:intron | 40.0% | |
| TAGCAACTAGTAGGTGAAGA+AGG | - | chr4.4:39080472-39080491 | None:intergenic | 40.0% | |
| TGACAGAAGCAAGTGTTCAA+TGG | + | chr4.4:39081495-39081514 | MS.gene28324:CDS | 40.0% | |
| TGTAGTTGAAACAGGAAGCT+TGG | - | chr4.4:39083000-39083019 | None:intergenic | 40.0% | |
| TTATCTGGAGATGAACCATC+TGG | - | chr4.4:39082846-39082865 | None:intergenic | 40.0% | |
| ! | AACGATTGGTTGGATGAGAT+AGG | + | chr4.4:39083398-39083417 | MS.gene28324:CDS | 40.0% |
| ! | ACGAAGCAAAGGAACTCTTT+TGG | + | chr4.4:39081407-39081426 | MS.gene28324:CDS | 40.0% |
| ! | AGAAAGTGTGTGCAAAGAAC+AGG | - | chr4.4:39084288-39084307 | None:intergenic | 40.0% |
| ! | AGTTCCTTGTAAGGCTTGTT+TGG | - | chr4.4:39083141-39083160 | None:intergenic | 40.0% |
| ! | ATGTACTTTTCCTAGGAGTC+TGG | - | chr4.4:39081250-39081269 | None:intergenic | 40.0% |
| ! | ATTCTGAGGGTTATGTTCCT+TGG | - | chr4.4:39082745-39082764 | None:intergenic | 40.0% |
| ! | CGTCTTCTCTTGAATTTTCG+AGG | - | chr4.4:39083073-39083092 | None:intergenic | 40.0% |
| ! | GTTTTCTTCCTTAGAGGACT+TGG | - | chr4.4:39081324-39081343 | None:intergenic | 40.0% |
| ! | TCACTCGATGTACTTTTCCT+AGG | - | chr4.4:39081257-39081276 | None:intergenic | 40.0% |
| ! | TGTTTGGAATTAGCTACTGC+TGG | - | chr4.4:39083125-39083144 | None:intergenic | 40.0% |
| !! | AGGAATTGAACTTGGTGCTA+AGG | + | chr4.4:39080669-39080688 | MS.gene28324:CDS | 40.0% |
| !! | AGTTAACGGTGATGGAACTA+TGG | + | chr4.4:39081367-39081386 | MS.gene28324:CDS | 40.0% |
| !! | CTTCTGAGGTTAAGGTTAAG+AGG | + | chr4.4:39080266-39080285 | MS.gene28324:CDS | 40.0% |
| !! | GTTGGACCGTTATTGACTTA+AGG | + | chr4.4:39081910-39081929 | MS.gene28324:intron | 40.0% |
| !! | TAAAAGCGTCAACGATTGGT+TGG | + | chr4.4:39083388-39083407 | MS.gene28324:CDS | 40.0% |
| !! | TAGCAATGCTTCTGAGGTTA+AGG | + | chr4.4:39080258-39080277 | MS.gene28324:CDS | 40.0% |
| AAATCATCCGCGCACTATTC+AGG | - | chr4.4:39082800-39082819 | None:intergenic | 45.0% | |
| AACACCAACCAAGTCCTCTA+AGG | + | chr4.4:39081313-39081332 | MS.gene28324:CDS | 45.0% | |
| ACAGGAAGCTTGGACAATTG+AGG | - | chr4.4:39082990-39083009 | None:intergenic | 45.0% | |
| ACTTCCCGGAAACTTTGTCA+AGG | + | chr4.4:39081451-39081470 | MS.gene28324:CDS | 45.0% | |
| AGGTCAGACTCTTACTACTG+AGG | - | chr4.4:39082496-39082515 | None:intergenic | 45.0% | |
| AGTGGATAGGCTGATTGCTA+AGG | + | chr4.4:39080555-39080574 | MS.gene28324:CDS | 45.0% | |
| ATAGGCTGATTGCTAAGGTG+GGG | + | chr4.4:39080560-39080579 | MS.gene28324:CDS | 45.0% | |
| ATCTATTGCGAAGCTTGGGA+GGG | + | chr4.4:39081532-39081551 | MS.gene28324:CDS | 45.0% | |
| CACTTTCATTGGAGAGGACT+TGG | - | chr4.4:39080305-39080324 | None:intergenic | 45.0% | |
| CCAAGCTTCGCAATAGATGA+AGG | - | chr4.4:39081530-39081549 | None:intergenic | 45.0% | |
| CCTCAGGAACGGTTGTAAAA+TGG | + | chr4.4:39082545-39082564 | MS.gene28324:intron | 45.0% | |
| CCTTCATCTATTGCGAAGCT+TGG | + | chr4.4:39081527-39081546 | MS.gene28324:CDS | 45.0% | |
| CCTTTAATCCACTCTTGGAG+TGG | - | chr4.4:39083218-39083237 | None:intergenic | 45.0% | |
| CTAAATTAACCGCCGCATCA+AGG | - | chr4.4:39083247-39083266 | None:intergenic | 45.0% | |
| CTCCAACACTTTCATTGGAG+AGG | - | chr4.4:39080311-39080330 | None:intergenic | 45.0% | |
| GACGCTTCATTGAAAGCTCA+TGG | + | chr4.4:39083089-39083108 | MS.gene28324:CDS | 45.0% | |
| GATAGGCTGATTGCTAAGGT+GGG | + | chr4.4:39080559-39080578 | MS.gene28324:CDS | 45.0% | |
| GTTGTTCAAAAAGACAGGCC+TGG | - | chr4.4:39081076-39081095 | None:intergenic | 45.0% | |
| TCAAGCAACGCAGGCATTAA+TGG | - | chr4.4:39084037-39084056 | None:intergenic | 45.0% | |
| TGGAGATGAACCATCTGGAA+TGG | - | chr4.4:39082841-39082860 | None:intergenic | 45.0% | |
| TGTCAAACACCAGACCTTGT+TGG | + | chr4.4:39081102-39081121 | MS.gene28324:intron | 45.0% | |
| TTCCGATTCTTCGTGGTGTT+AGG | + | chr4.4:39080164-39080183 | MS.gene28324:CDS | 45.0% | |
| ! | ATGGTGGCTTGGAGGAAATT+TGG | + | chr4.4:39083656-39083675 | MS.gene28324:intron | 45.0% |
| ! | ATTGCATCACCTTGTTTGCG+CGG | - | chr4.4:39083164-39083183 | None:intergenic | 45.0% |
| ! | CCATTTTACAACCGTTCCTG+AGG | - | chr4.4:39082548-39082567 | None:intergenic | 45.0% |
| ! | GCATTATTATGGTGGCTTGG+AGG | + | chr4.4:39083648-39083667 | MS.gene28324:intron | 45.0% |
| ! | GGATGAGAGATTGGTGGATA+AGG | - | chr4.4:39082946-39082965 | None:intergenic | 45.0% |
| ! | GTCCTCTCCAATGAAAGTGT+TGG | + | chr4.4:39080306-39080325 | MS.gene28324:CDS | 45.0% |
| ! | TCTTCCTTAGAGGACTTGGT+TGG | - | chr4.4:39081320-39081339 | None:intergenic | 45.0% |
| ! | TTGGACAGTGATGGAGACAT+TGG | + | chr4.4:39083323-39083342 | MS.gene28324:CDS | 45.0% |
| !! | CCACTCCAAGAGTGGATTAA+AGG | + | chr4.4:39083215-39083234 | MS.gene28324:CDS | 45.0% |
| !!! | AATTTTGTTTTTTTTTTTTT+TGG | - | chr4.4:39083685-39083704 | None:intergenic | 5.0% |
| !!! | ATATTTTTTTTAAAGAAATT+GGG | - | chr4.4:39082610-39082629 | None:intergenic | 5.0% |
| !!! | TATATTTTTTTTAAAGAAAT+TGG | - | chr4.4:39082611-39082630 | None:intergenic | 5.0% |
| AAATCTCCACCTGCTAGTGC+TGG | - | chr4.4:39079992-39080011 | None:intergenic | 50.0% | |
| ACACCACGAAGAATCGGAAC+AGG | - | chr4.4:39080163-39080182 | None:intergenic | 50.0% | |
| ACTGCAATTCTCTTCCCGAG+AGG | - | chr4.4:39080622-39080641 | None:intergenic | 50.0% | |
| AGCAACTGAGGCTATGCAAG+AGG | + | chr4.4:39082076-39082095 | MS.gene28324:CDS | 50.0% | |
| AGCATTGTTCCAGCACTAGC+AGG | + | chr4.4:39079980-39079999 | MS.gene28324:CDS | 50.0% | |
| AGGAAATGACCTTGATGCGG+CGG | + | chr4.4:39083235-39083254 | MS.gene28324:CDS | 50.0% | |
| ATGGCTGATGGCAGATGAAG+AGG | - | chr4.4:39084482-39084501 | None:intergenic | 50.0% | |
| ATTGTTCCAGCACTAGCAGG+TGG | + | chr4.4:39079983-39080002 | MS.gene28324:CDS | 50.0% | |
| CATCTATTGCGAAGCTTGGG+AGG | + | chr4.4:39081531-39081550 | MS.gene28324:CDS | 50.0% | |
| CGATCGCAATTGCAGCATGT+CGG | - | chr4.4:39083270-39083289 | None:intergenic | 50.0% | |
| CTCGGGAAGAGAATTGCAGT+TGG | + | chr4.4:39080622-39080641 | MS.gene28324:CDS | 50.0% | |
| GAAAAGCTGGGAAGGGAACA+TGG | + | chr4.4:39080699-39080718 | MS.gene28324:CDS | 50.0% | |
| GACAAAGTTTCCGGGAAGTC+CGG | - | chr4.4:39081450-39081469 | None:intergenic | 50.0% | |
| GCTTGGACAATTGAGGCTCT+CGG | - | chr4.4:39082983-39083002 | None:intergenic | 50.0% | |
| GGATAGGCTGATTGCTAAGG+TGG | + | chr4.4:39080558-39080577 | MS.gene28324:CDS | 50.0% | |
| GGCCTAACACCACGAAGAAT+CGG | - | chr4.4:39080169-39080188 | None:intergenic | 50.0% | |
| GGGGGAATCATGTCAGATAC+CGG | + | chr4.4:39083436-39083455 | MS.gene28324:CDS | 50.0% | |
| TAGGCTGATTGCTAAGGTGG+GGG | + | chr4.4:39080561-39080580 | MS.gene28324:CDS | 50.0% | |
| TCCAACAACCACTCCAAGAG+TGG | + | chr4.4:39083207-39083226 | MS.gene28324:CDS | 50.0% | |
| TCCACTCTTGGAGTGGTTGT+TGG | - | chr4.4:39083211-39083230 | None:intergenic | 50.0% | |
| TGGCTGATGGCAGATGAAGA+GGG | - | chr4.4:39084481-39084500 | None:intergenic | 50.0% | |
| TTCTGGTGTTCCAGACTCCT+AGG | + | chr4.4:39081237-39081256 | MS.gene28324:intron | 50.0% | |
| TTTGCGCGGAGTTCCTTGTA+AGG | - | chr4.4:39083150-39083169 | None:intergenic | 50.0% | |
| ! | ACACTAGCCTGAATAGTGCG+CGG | + | chr4.4:39082790-39082809 | MS.gene28324:CDS | 50.0% |
| ! | GATTGGTGGATAAGGCAGCT+TGG | - | chr4.4:39082938-39082957 | None:intergenic | 50.0% |
| !! | AACTTGGTGCTAAGGCGTTG+CGG | + | chr4.4:39080677-39080696 | MS.gene28324:CDS | 50.0% |
| !! | TAAGGCGTTGCGGAAAAGCT+GGG | + | chr4.4:39080687-39080706 | MS.gene28324:CDS | 50.0% |
| AGCACAGATGGCAGCAACTG+AGG | + | chr4.4:39082064-39082083 | MS.gene28324:CDS | 55.0% | |
| CAAGCATGTCTCCCAGGAAC+AGG | - | chr4.4:39080190-39080209 | None:intergenic | 55.0% | |
| CAAGGAACTCCGCGCAAACA+AGG | + | chr4.4:39083152-39083171 | MS.gene28324:CDS | 55.0% | |
| CCAACACAAGCATGTCTCCC+AGG | - | chr4.4:39080196-39080215 | None:intergenic | 55.0% | |
| CCTGGGAGACATGCTTGTGT+TGG | + | chr4.4:39080193-39080212 | MS.gene28324:CDS | 55.0% | |
| CGTTGCGGAAAAGCTGGGAA+GGG | + | chr4.4:39080692-39080711 | MS.gene28324:CDS | 55.0% | |
| GCACAGAGATGCAGCACAGA+TGG | + | chr4.4:39082052-39082071 | MS.gene28324:CDS | 55.0% | |
| GTTCGCGGAGTTAGTCCTCT+CGG | + | chr4.4:39080604-39080623 | MS.gene28324:CDS | 55.0% | |
| TCGCCTGTTCCGATTCTTCG+TGG | + | chr4.4:39080157-39080176 | MS.gene28324:CDS | 55.0% | |
| TCTTCAGAAGCCGGACTTCC+CGG | + | chr4.4:39081437-39081456 | MS.gene28324:CDS | 55.0% | |
| TGCAATTGCGATCGCGAGAC+TGG | + | chr4.4:39083276-39083295 | MS.gene28324:CDS | 55.0% | |
| TTCGCGGAGTTAGTCCTCTC+GGG | + | chr4.4:39080605-39080624 | MS.gene28324:CDS | 55.0% | |
| ! | GTGGTGTTAGGCCTGTTCCT+GGG | + | chr4.4:39080176-39080195 | MS.gene28324:CDS | 55.0% |
| !! | CTAAGGCGTTGCGGAAAAGC+TGG | + | chr4.4:39080686-39080705 | MS.gene28324:CDS | 55.0% |
| GATTGCTAAGGTGGGGGTGG+TGG | + | chr4.4:39080567-39080586 | MS.gene28324:CDS | 60.0% | |
| GCGTTGCGGAAAAGCTGGGA+AGG | + | chr4.4:39080691-39080710 | MS.gene28324:CDS | 60.0% | |
| GCTGATTGCTAAGGTGGGGG+TGG | + | chr4.4:39080564-39080583 | MS.gene28324:CDS | 60.0% | |
| ! | CGTGGTGTTAGGCCTGTTCC+TGG | + | chr4.4:39080175-39080194 | MS.gene28324:CDS | 60.0% |
| !! | GAGACGGGAAAGGGTGTTCG+CGG | + | chr4.4:39080589-39080608 | MS.gene28324:CDS | 60.0% |
| !! | TAAGGTGGGGGTGGTGGAGA+CGG | + | chr4.4:39080573-39080592 | MS.gene28324:CDS | 60.0% |
| !! | AAGGTGGGGGTGGTGGAGAC+GGG | + | chr4.4:39080574-39080593 | MS.gene28324:CDS | 65.0% |
| !! | GGGGTGGTGGAGACGGGAAA+GGG | + | chr4.4:39080580-39080599 | MS.gene28324:CDS | 65.0% |
| !! | GGGGGTGGTGGAGACGGGAA+AGG | + | chr4.4:39080579-39080598 | MS.gene28324:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 39079878 | 39084509 | 39079878 | ID=MS.gene28324 |
| chr4.4 | mRNA | 39079878 | 39084509 | 39079878 | ID=MS.gene28324.t1;Parent=MS.gene28324 |
| chr4.4 | exon | 39079878 | 39080798 | 39079878 | ID=MS.gene28324.t1.exon1;Parent=MS.gene28324.t1 |
| chr4.4 | CDS | 39079878 | 39080798 | 39079878 | ID=cds.MS.gene28324.t1;Parent=MS.gene28324.t1 |
| chr4.4 | exon | 39081251 | 39081553 | 39081251 | ID=MS.gene28324.t1.exon2;Parent=MS.gene28324.t1 |
| chr4.4 | CDS | 39081251 | 39081553 | 39081251 | ID=cds.MS.gene28324.t1;Parent=MS.gene28324.t1 |
| chr4.4 | exon | 39082041 | 39082132 | 39082041 | ID=MS.gene28324.t1.exon3;Parent=MS.gene28324.t1 |
| chr4.4 | CDS | 39082041 | 39082132 | 39082041 | ID=cds.MS.gene28324.t1;Parent=MS.gene28324.t1 |
| chr4.4 | exon | 39082716 | 39083457 | 39082716 | ID=MS.gene28324.t1.exon4;Parent=MS.gene28324.t1 |
| chr4.4 | CDS | 39082716 | 39083457 | 39082716 | ID=cds.MS.gene28324.t1;Parent=MS.gene28324.t1 |
| chr4.4 | exon | 39084498 | 39084509 | 39084498 | ID=MS.gene28324.t1.exon5;Parent=MS.gene28324.t1 |
| chr4.4 | CDS | 39084498 | 39084509 | 39084498 | ID=cds.MS.gene28324.t1;Parent=MS.gene28324.t1 |
| Gene Sequence |
| Protein sequence |
