Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28328.t1 | XP_024638393.1 | 92.9 | 577 | 41 | 0 | 1 | 577 | 1 | 577 | 5.20E-308 | 1066.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28328.t1 | A9X4U2 | 53.0 | 545 | 242 | 5 | 10 | 544 | 9 | 549 | 3.7e-145 | 516.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28328.t1 | G7JEW0 | 92.9 | 577 | 41 | 0 | 1 | 577 | 1 | 577 | 3.8e-308 | 1066.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28328 | MS.gene32741 | PPI |
| MS.gene28328 | MS.gene02691 | PPI |
| MS.gene014947 | MS.gene28328 | PPI |
| MS.gene42650 | MS.gene28328 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28328.t1 | MTR_4g068110 | 94.974 | 577 | 29 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1069 |
| MS.gene28328.t1 | MTR_4g068110 | 94.778 | 517 | 27 | 0 | 1 | 517 | 1 | 517 | 0.0 | 948 |
| MS.gene28328.t1 | MTR_3g105440 | 43.315 | 531 | 284 | 9 | 16 | 531 | 9 | 537 | 1.34e-141 | 422 |
| MS.gene28328.t1 | MTR_3g105440 | 42.994 | 521 | 279 | 10 | 16 | 520 | 9 | 527 | 9.92e-135 | 403 |
| MS.gene28328.t1 | MTR_1g026540 | 27.419 | 372 | 234 | 7 | 14 | 356 | 12 | 376 | 1.22e-28 | 119 |
| MS.gene28328.t1 | MTR_1g026540 | 27.715 | 267 | 166 | 5 | 113 | 352 | 17 | 283 | 4.45e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28328.t1 | AT2G43420 | 54.167 | 552 | 237 | 6 | 10 | 553 | 9 | 552 | 0.0 | 568 |
| MS.gene28328.t1 | AT2G26260 | 42.830 | 530 | 286 | 7 | 16 | 531 | 12 | 538 | 5.71e-141 | 420 |
| MS.gene28328.t1 | AT2G26260 | 43.274 | 446 | 239 | 5 | 97 | 531 | 5 | 447 | 8.21e-121 | 365 |
| MS.gene28328.t1 | AT1G47290 | 41.124 | 445 | 227 | 10 | 16 | 443 | 12 | 438 | 6.01e-102 | 315 |
| MS.gene28328.t1 | AT1G47290 | 46.875 | 352 | 171 | 6 | 16 | 353 | 12 | 361 | 2.44e-97 | 301 |
| MS.gene28328.t1 | AT2G33630 | 27.005 | 374 | 231 | 11 | 15 | 357 | 13 | 375 | 3.49e-25 | 109 |
Find 114 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAAATCGTCGCCATTAT+TGG | 0.186420 | 4.4:-39117928 | None:intergenic |
| CTGAATAAAATGAACTAATA+AGG | 0.193446 | 4.4:-39120278 | None:intergenic |
| AGCTCTTGAAACTCGGTAAT+TGG | 0.202627 | 4.4:+39117658 | MS.gene28328:CDS |
| AGAAACCGTTTGGAAATTTA+AGG | 0.202728 | 4.4:-39119490 | None:intergenic |
| AGGTCTGGTCTTCGCATTTA+TGG | 0.206815 | 4.4:+39124027 | MS.gene28328:intron |
| AAGATGAATCTTTAGCTAAA+TGG | 0.228488 | 4.4:-39120940 | None:intergenic |
| TAAGGGATAATTGAAGTATC+TGG | 0.229423 | 4.4:-39120260 | None:intergenic |
| TTCTCATTTCAGTTTATTAT+AGG | 0.283228 | 4.4:+39119396 | MS.gene28328:intron |
| AGGCTTCTTCTGCACAGATA+TGG | 0.288826 | 4.4:-39119470 | None:intergenic |
| GTATCGCGGCTTCTGCATTA+TGG | 0.298204 | 4.4:+39124160 | MS.gene28328:CDS |
| TCTCATTTCAGTTTATTATA+GGG | 0.298844 | 4.4:+39119397 | MS.gene28328:intron |
| TTTGGCGATGCGGTGTTTAT+CGG | 0.308465 | 4.4:-39117790 | None:intergenic |
| CCTAAAACATTGCAGGTTGC+AGG | 0.314136 | 4.4:+39123862 | MS.gene28328:intron |
| TTCCAAACGGTTTCTGTGGC+TGG | 0.327151 | 4.4:+39119498 | MS.gene28328:CDS |
| CAAGGGGTTTCAAAATATAA+AGG | 0.328677 | 4.4:+39122851 | MS.gene28328:CDS |
| TTGCAATTACAGTTCATCTA+TGG | 0.329327 | 4.4:+39122826 | MS.gene28328:CDS |
| AGAAATTTCCAGAACTTCAT+AGG | 0.339878 | 4.4:-39119640 | None:intergenic |
| TTTCTAAAGTTAGCAAGATA+TGG | 0.340584 | 4.4:+39118737 | MS.gene28328:CDS |
| GCATCCTTCGCATGTTTCCT+TGG | 0.343415 | 4.4:+39122197 | MS.gene28328:CDS |
| ATCTCGAGCCTATGAAGTTC+TGG | 0.357888 | 4.4:+39119632 | MS.gene28328:CDS |
| GAGAACGTATTGCACTAAAT+TGG | 0.359341 | 4.4:-39120203 | None:intergenic |
| CTTGCCGGCATCCTGGTTCT+TGG | 0.363723 | 4.4:-39124201 | None:intergenic |
| TAACATGTTAATTGACCTTA+AGG | 0.365154 | 4.4:+39118604 | MS.gene28328:CDS |
| AAAGTGGTTATATGAAAAGT+TGG | 0.370480 | 4.4:+39120234 | MS.gene28328:CDS |
| CATCCTTCGCATGTTTCCTT+GGG | 0.373805 | 4.4:+39122198 | MS.gene28328:CDS |
| TGAATAAAATGAACTAATAA+GGG | 0.383233 | 4.4:-39120277 | None:intergenic |
| CTTCGTCCTAGTAATGTGTT+TGG | 0.389793 | 4.4:+39118686 | MS.gene28328:CDS |
| CTTCGCATGTTTCCTTGGGC+TGG | 0.390502 | 4.4:+39122202 | MS.gene28328:CDS |
| AGATGAATCTTTAGCTAAAT+GGG | 0.392771 | 4.4:-39120939 | None:intergenic |
| GATGTTGATAGTTCCAATAA+TGG | 0.394753 | 4.4:+39117915 | MS.gene28328:CDS |
| AAGCTTCTGCTTGAGCCTTA+AGG | 0.395733 | 4.4:-39118619 | None:intergenic |
| GAGATTCGGAGTGGTGAAGT+TGG | 0.396484 | 4.4:-39117713 | None:intergenic |
| GGCTTCTTCTGCACAGATAT+GGG | 0.399104 | 4.4:-39119469 | None:intergenic |
| CTCAGATCTTGCCGGCATCC+TGG | 0.403805 | 4.4:-39124208 | None:intergenic |
| TTGGCTATCTCAGATCTTGC+CGG | 0.404872 | 4.4:-39124216 | None:intergenic |
| TTCCAGCCACAGAAACCGTT+TGG | 0.407106 | 4.4:-39119500 | None:intergenic |
| GACTGGCCCAAGGGGATGAT+TGG | 0.407389 | 4.4:+39122874 | MS.gene28328:CDS |
| TGCTGAGCAGTTGAAAGTTC+GGG | 0.411099 | 4.4:-39120314 | None:intergenic |
| CCAGGACCAAACACATTACT+AGG | 0.425247 | 4.4:-39118692 | None:intergenic |
| TTCTATATACAGAAAGTGCC+TGG | 0.425516 | 4.4:+39122762 | MS.gene28328:CDS |
| TTGAATGCTAATGACATTGA+TGG | 0.433974 | 4.4:+39118647 | MS.gene28328:CDS |
| AAGTTGTTGACAACATTGAT+AGG | 0.434000 | 4.4:+39123916 | MS.gene28328:CDS |
| TAAATGGGAGAATGACTCTA+TGG | 0.435195 | 4.4:-39120924 | None:intergenic |
| AAGCTGCTTGGCAGTGGAAA+AGG | 0.441251 | 4.4:+39120995 | MS.gene28328:CDS |
| CTGCTGAGCAGTTGAAAGTT+CGG | 0.443163 | 4.4:-39120315 | None:intergenic |
| TTTCAGTTTATTATAGGGAC+TGG | 0.452762 | 4.4:+39119402 | MS.gene28328:intron |
| AAGTGGTTATATGAAAAGTT+GGG | 0.458760 | 4.4:+39120235 | MS.gene28328:CDS |
| TTGGATAGAGTGGGTTGAAT+CGG | 0.467724 | 4.4:-39117694 | None:intergenic |
| TACTATTTCGAAGGAGTTCG+TGG | 0.468952 | 4.4:+39124108 | MS.gene28328:CDS |
| AAGGGGTTTCAAAATATAAA+GGG | 0.473586 | 4.4:+39122852 | MS.gene28328:CDS |
| CTTGTGACTTTACTTCTATG+TGG | 0.483414 | 4.4:+39122293 | MS.gene28328:CDS |
| AGTGGTGAAGTTGGATAGAG+TGG | 0.485422 | 4.4:-39117704 | None:intergenic |
| AGAAGCCGCGATACAGAAAC+AGG | 0.491272 | 4.4:-39124151 | None:intergenic |
| CAATATGAATCAGAAATTGA+TGG | 0.493355 | 4.4:+39124067 | MS.gene28328:CDS |
| GCATACACGTACAGCTTTGA+CGG | 0.497709 | 4.4:-39122329 | None:intergenic |
| TCGTATAAGCTAATAGTTCA+AGG | 0.497858 | 4.4:+39117954 | MS.gene28328:CDS |
| GCAGATAAGCTGCTTGGCAG+TGG | 0.498828 | 4.4:+39120989 | MS.gene28328:CDS |
| AGCTTCGGCGAGGAGAGATT+CGG | 0.508939 | 4.4:-39117727 | None:intergenic |
| AACGATTACCTTTGGCGATG+CGG | 0.512819 | 4.4:-39117800 | None:intergenic |
| GCGGGAAGAAGAGAGAGCTT+CGG | 0.517075 | 4.4:-39117742 | None:intergenic |
| AAACAAAATCTCACTTTCCA+CGG | 0.518178 | 4.4:-39118155 | None:intergenic |
| AACGGTTTCTGTGGCTGGAA+AGG | 0.529050 | 4.4:+39119503 | MS.gene28328:CDS |
| CCTAGTAATGTGTTTGGTCC+TGG | 0.532725 | 4.4:+39118692 | MS.gene28328:CDS |
| TATTCTAATTACTATTTCGA+AGG | 0.535170 | 4.4:+39124099 | MS.gene28328:CDS |
| ACTTTACTTCTATGTGGACA+TGG | 0.535685 | 4.4:+39122299 | MS.gene28328:CDS |
| AAGGGATAATTGAAGTATCT+GGG | 0.536434 | 4.4:-39120259 | None:intergenic |
| GTCTTACAGCTCTTGAAACT+CGG | 0.537906 | 4.4:+39117651 | MS.gene28328:CDS |
| ATATAGACCAATCATCCCCT+TGG | 0.538912 | 4.4:-39122881 | None:intergenic |
| AGAAGCCTTAAATTTCCAAA+CGG | 0.538975 | 4.4:+39119485 | MS.gene28328:CDS |
| ACGTATTGCACTAAATTGGC+AGG | 0.543773 | 4.4:-39120199 | None:intergenic |
| TTGATAGAAACAACTTCAGA+AGG | 0.544616 | 4.4:-39123894 | None:intergenic |
| TATAGACCAATCATCCCCTT+GGG | 0.549707 | 4.4:-39122880 | None:intergenic |
| GTTTATCGGTGAGGTCGAGA+TGG | 0.551299 | 4.4:-39117776 | None:intergenic |
| TGGAAGGTCTTGGATATCAA+AGG | 0.552089 | 4.4:+39119674 | MS.gene28328:CDS |
| AATATAAAGGGACTGGCCCA+AGG | 0.562565 | 4.4:+39122864 | MS.gene28328:CDS |
| TTAGGCGGAAGAGGATTCAT+CGG | 0.563311 | 4.4:+39117618 | MS.gene28328:CDS |
| ATTACCAAGAACCAGGATGC+CGG | 0.563914 | 4.4:+39124197 | MS.gene28328:CDS |
| CAGTTCATCTATGGAACAAG+GGG | 0.563995 | 4.4:+39122835 | MS.gene28328:CDS |
| AAATTTCCAAACGGTTTCTG+TGG | 0.569052 | 4.4:+39119494 | MS.gene28328:CDS |
| GATAAACACCGCATCGCCAA+AGG | 0.569929 | 4.4:+39117792 | MS.gene28328:CDS |
| GTTTCAAAATATAAAGGGAC+TGG | 0.573097 | 4.4:+39122857 | MS.gene28328:CDS |
| GTTTGAATCTTGGAAGCGAT+CGG | 0.576682 | 4.4:-39117577 | None:intergenic |
| TACAGTTCATCTATGGAACA+AGG | 0.578912 | 4.4:+39122833 | MS.gene28328:CDS |
| TTGGCAGGAAGCTTGATGAA+TGG | 0.582883 | 4.4:-39120184 | None:intergenic |
| TCAAAAGCAGATAAGCTGCT+TGG | 0.583217 | 4.4:+39120983 | MS.gene28328:CDS |
| ATATAAAAGTGCTTCCAGAA+AGG | 0.584125 | 4.4:-39122247 | None:intergenic |
| TTGACAACATTGATAGGTGT+AGG | 0.592543 | 4.4:+39123922 | MS.gene28328:CDS |
| GGCACAAATTCTGTGTCACC+AGG | 0.593114 | 4.4:-39118710 | None:intergenic |
| ATCAGAAATTGATGGACTTG+CGG | 0.598614 | 4.4:+39124075 | MS.gene28328:CDS |
| TTTGTTGTGGAGAAACGAGA+AGG | 0.604394 | 4.4:+39122175 | MS.gene28328:CDS |
| ATGAGCAACATTCTCAGAGA+AGG | 0.605397 | 4.4:-39119445 | None:intergenic |
| ATATAAAGGGACTGGCCCAA+GGG | 0.607612 | 4.4:+39122865 | MS.gene28328:CDS |
| TCTATATACAGAAAGTGCCT+GGG | 0.610255 | 4.4:+39122763 | MS.gene28328:CDS |
| CAGGCAGATTTAAACCTCAA+GGG | 0.611030 | 4.4:-39120371 | None:intergenic |
| ATTCTCAGAGAAGGTGAAGT+CGG | 0.612623 | 4.4:-39119436 | None:intergenic |
| GAGATGGACGTAAGAAGCGC+GGG | 0.614728 | 4.4:-39117760 | None:intergenic |
| TTTCAGCATTACCAAGAACC+AGG | 0.620715 | 4.4:+39124190 | MS.gene28328:CDS |
| ACAGTTCATCTATGGAACAA+GGG | 0.622953 | 4.4:+39122834 | MS.gene28328:CDS |
| ACTTACCTGTTTCTGTATCG+CGG | 0.631302 | 4.4:+39124146 | MS.gene28328:CDS |
| TATAAAGGGACTGGCCCAAG+GGG | 0.640004 | 4.4:+39122866 | MS.gene28328:CDS |
| ATAAACCGCTGGCATATCCG+TGG | 0.642428 | 4.4:+39118138 | MS.gene28328:CDS |
| TAAACCTCAAGGGAGACTAT+CGG | 0.644006 | 4.4:-39120361 | None:intergenic |
| CGATGCGGTGTTTATCGGTG+AGG | 0.647508 | 4.4:-39117785 | None:intergenic |
| GTTTGATCGAGATAAACCGC+TGG | 0.649246 | 4.4:+39118127 | MS.gene28328:CDS |
| GTGGTGAAGTTGGATAGAGT+GGG | 0.654580 | 4.4:-39117703 | None:intergenic |
| CGAGATGGACGTAAGAAGCG+CGG | 0.655470 | 4.4:-39117761 | None:intergenic |
| GAGATCTTAAAATTAGACCC+AGG | 0.666664 | 4.4:-39122780 | None:intergenic |
| CGCACCGATAGTCTCCCTTG+AGG | 0.674196 | 4.4:+39120357 | MS.gene28328:CDS |
| AGCAAGATATGGTTTCACAA+AGG | 0.676071 | 4.4:+39118748 | MS.gene28328:CDS |
| ACTTTCCACGGATATGCCAG+CGG | 0.677833 | 4.4:-39118143 | None:intergenic |
| CAGCCCAAGGAAACATGCGA+AGG | 0.680658 | 4.4:-39122201 | None:intergenic |
| AACATCCAAATAGAAAACGA+CGG | 0.691674 | 4.4:-39117898 | None:intergenic |
| AAGAAGAGAGAGCTTCGGCG+AGG | 0.697178 | 4.4:-39117737 | None:intergenic |
| CGGCGAGGAGAGATTCGGAG+TGG | 0.728152 | 4.4:-39117722 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTAAAGAAACAA+AGG | - | chr4.4:39118191-39118210 | None:intergenic | 10.0% |
| !! | AACAAAAAAAAAAAAATTCT+AGG | + | chr4.4:39123437-39123456 | MS.gene28328:intron | 10.0% |
| !! | TTCTTGTATTAAAAAATTAT+AGG | + | chr4.4:39118913-39118932 | MS.gene28328:intron | 10.0% |
| !!! | TAGAATTTTTTTTTTTTTGT+TGG | - | chr4.4:39123438-39123457 | None:intergenic | 10.0% |
| !! | AAATTTAATTAGAATAGGAA+AGG | - | chr4.4:39122970-39122989 | None:intergenic | 15.0% |
| !! | ATGTATTTGTGTAATAAATA+GGG | + | chr4.4:39123572-39123591 | MS.gene28328:intron | 15.0% |
| !! | ATTGACAAAAAGAAATAAAA+AGG | - | chr4.4:39120626-39120645 | None:intergenic | 15.0% |
| !! | TAATATAAAAGCAAGAAATA+CGG | - | chr4.4:39120100-39120119 | None:intergenic | 15.0% |
| !! | TATGTATTTGTGTAATAAAT+AGG | + | chr4.4:39123571-39123590 | MS.gene28328:intron | 15.0% |
| !! | TGAATAAAATGAACTAATAA+GGG | - | chr4.4:39120280-39120299 | None:intergenic | 15.0% |
| !! | TTAAAGATATTAATCAAAGA+TGG | + | chr4.4:39120648-39120667 | MS.gene28328:intron | 15.0% |
| !! | TTTAGTTAATTTATTCAAAG+TGG | + | chr4.4:39122547-39122566 | MS.gene28328:intron | 15.0% |
| !!! | AGTAACAATTTAAAATAAAC+AGG | - | chr4.4:39120393-39120412 | None:intergenic | 15.0% |
| !!! | ATGTTATTTGAAAATTGTTT+TGG | + | chr4.4:39122655-39122674 | MS.gene28328:intron | 15.0% |
| !!! | TGTTATTTGAAAATTGTTTT+GGG | + | chr4.4:39122656-39122675 | MS.gene28328:intron | 15.0% |
| !!! | TGTTATTTGATGTTTAATTT+AGG | + | chr4.4:39118029-39118048 | MS.gene28328:intron | 15.0% |
| !! | ACTAACATATACATATGAAA+AGG | - | chr4.4:39119193-39119212 | None:intergenic | 20.0% |
| !! | ATAAAAGAATCAAGAGAAAT+TGG | + | chr4.4:39118211-39118230 | MS.gene28328:intron | 20.0% |
| !! | ATATATGAAGGAAAATAAAG+TGG | - | chr4.4:39120772-39120791 | None:intergenic | 20.0% |
| !! | ATTGGTACAAGATAAATATA+AGG | + | chr4.4:39121420-39121439 | MS.gene28328:intron | 20.0% |
| !! | CTAACATATACATATGAAAA+GGG | - | chr4.4:39119192-39119211 | None:intergenic | 20.0% |
| !! | CTGAATAAAATGAACTAATA+AGG | - | chr4.4:39120281-39120300 | None:intergenic | 20.0% |
| !! | GTAATAAATAGGGAATTTAT+TGG | + | chr4.4:39123582-39123601 | MS.gene28328:intron | 20.0% |
| !! | TAGTACAAAATTAGTAGAAA+AGG | - | chr4.4:39119150-39119169 | None:intergenic | 20.0% |
| !! | TATTCTAATTACTATTTCGA+AGG | + | chr4.4:39124099-39124118 | MS.gene28328:CDS | 20.0% |
| !! | TCTCATTTCAGTTTATTATA+GGG | + | chr4.4:39119397-39119416 | MS.gene28328:intron | 20.0% |
| !! | TGCTATGAATTATTAATGAT+CGG | - | chr4.4:39123474-39123493 | None:intergenic | 20.0% |
| !! | TTAACAAAAAAAAACAAAGC+AGG | - | chr4.4:39118788-39118807 | None:intergenic | 20.0% |
| !! | TTACATGGAAATTGAATATT+TGG | + | chr4.4:39122051-39122070 | MS.gene28328:intron | 20.0% |
| !! | TTATCATTATAAAATCGTGT+AGG | + | chr4.4:39121876-39121895 | MS.gene28328:intron | 20.0% |
| !! | TTCAAAAATTAAAGTCAAGA+TGG | - | chr4.4:39119926-39119945 | None:intergenic | 20.0% |
| !! | TTCTCATTTCAGTTTATTAT+AGG | + | chr4.4:39119396-39119415 | MS.gene28328:intron | 20.0% |
| !! | TTGGTACAAGATAAATATAA+GGG | + | chr4.4:39121421-39121440 | MS.gene28328:intron | 20.0% |
| !! | TTGTTAAATGAAAAAGAGAT+AGG | - | chr4.4:39123201-39123220 | None:intergenic | 20.0% |
| !!! | AAATTCAGTTTTTGATGAAA+GGG | - | chr4.4:39120681-39120700 | None:intergenic | 20.0% |
| !!! | ACTTTAATTTTTGAAGAACT+AGG | + | chr4.4:39119931-39119950 | MS.gene28328:intron | 20.0% |
| !!! | AGTAATCAAGTGATTTTAAA+AGG | + | chr4.4:39118560-39118579 | MS.gene28328:intron | 20.0% |
| !!! | ATTTTGGTTAATAGCATAAA+AGG | - | chr4.4:39120138-39120157 | None:intergenic | 20.0% |
| !!! | GTAATCAAGTGATTTTAAAA+GGG | + | chr4.4:39118561-39118580 | MS.gene28328:intron | 20.0% |
| !!! | TAATGTCAGAATCTTTTATT+TGG | + | chr4.4:39123056-39123075 | MS.gene28328:intron | 20.0% |
| !!! | TATTTCATTCTTTTTAGAAC+AGG | - | chr4.4:39120806-39120825 | None:intergenic | 20.0% |
| !!! | TGTTTTAATTAGAACAGTTA+TGG | + | chr4.4:39123534-39123553 | MS.gene28328:intron | 20.0% |
| !!! | TTGTTTTTCACCAAAAATAT+CGG | - | chr4.4:39119802-39119821 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTCATGTCAATAT+GGG | + | chr4.4:39119890-39119909 | MS.gene28328:intron | 20.0% |
| !!! | TTTTCTTTTTCATGTCAATA+TGG | + | chr4.4:39119889-39119908 | MS.gene28328:intron | 20.0% |
| ! | AAAAGAGAAAGAAAGTTGAA+AGG | + | chr4.4:39123114-39123133 | MS.gene28328:intron | 25.0% |
| ! | AAAGTGGTTATATGAAAAGT+TGG | + | chr4.4:39120234-39120253 | MS.gene28328:CDS | 25.0% |
| ! | AAGATGAATCTTTAGCTAAA+TGG | - | chr4.4:39120943-39120962 | None:intergenic | 25.0% |
| ! | AAGGGGTTTCAAAATATAAA+GGG | + | chr4.4:39122852-39122871 | MS.gene28328:CDS | 25.0% |
| ! | AAGTGGTTATATGAAAAGTT+GGG | + | chr4.4:39120235-39120254 | MS.gene28328:CDS | 25.0% |
| ! | AATAGGGAATTTATTGGAAA+AGG | + | chr4.4:39123588-39123607 | MS.gene28328:intron | 25.0% |
| ! | AATTTATTCAAAGTGGTTAG+TGG | + | chr4.4:39122554-39122573 | MS.gene28328:intron | 25.0% |
| ! | AATTTCAACTTCACTAAACT+GGG | + | chr4.4:39119097-39119116 | MS.gene28328:intron | 25.0% |
| ! | ACTATAAGCTTCAATAAGAA+AGG | - | chr4.4:39119014-39119033 | None:intergenic | 25.0% |
| ! | AGAAAAAATGAGTTAGAACT+TGG | - | chr4.4:39123286-39123305 | None:intergenic | 25.0% |
| ! | AGATGAATCTTTAGCTAAAT+GGG | - | chr4.4:39120942-39120961 | None:intergenic | 25.0% |
| ! | ATAGGGAATTTATTGGAAAA+GGG | + | chr4.4:39123589-39123608 | MS.gene28328:intron | 25.0% |
| ! | ATATCACCTGATGAATAATT+TGG | - | chr4.4:39120709-39120728 | None:intergenic | 25.0% |
| ! | ATTAATAATTCATAGCAGGT+CGG | + | chr4.4:39123477-39123496 | MS.gene28328:intron | 25.0% |
| ! | ATTAATGTGATAGAAACCTT+TGG | + | chr4.4:39121088-39121107 | MS.gene28328:intron | 25.0% |
| ! | ATTAGTGACAATTGGTTATA+TGG | + | chr4.4:39120453-39120472 | MS.gene28328:intron | 25.0% |
| ! | CAATATGAATCAGAAATTGA+TGG | + | chr4.4:39124067-39124086 | MS.gene28328:CDS | 25.0% |
| ! | CGTGTTAAAATGTTTATATC+TGG | + | chr4.4:39121037-39121056 | MS.gene28328:intron | 25.0% |
| ! | CTATAAGCTTCAATAAGAAA+GGG | - | chr4.4:39119013-39119032 | None:intergenic | 25.0% |
| ! | GAAGAAATAAAAGACAAGAT+TGG | - | chr4.4:39123264-39123283 | None:intergenic | 25.0% |
| ! | GATCATTAATAATTCATAGC+AGG | + | chr4.4:39123473-39123492 | MS.gene28328:intron | 25.0% |
| ! | GCTAAAATGAACTATTTACT+CGG | - | chr4.4:39118253-39118272 | None:intergenic | 25.0% |
| ! | GTACATGGAAATTGAATATT+TGG | + | chr4.4:39121924-39121943 | MS.gene28328:intron | 25.0% |
| ! | GTATATATTGAATTCCAATG+AGG | + | chr4.4:39119527-39119546 | MS.gene28328:intron | 25.0% |
| ! | TAACATGTTAATTGACCTTA+AGG | + | chr4.4:39118604-39118623 | MS.gene28328:CDS | 25.0% |
| ! | TTAGTGACAATTGGTTATAT+GGG | + | chr4.4:39120454-39120473 | MS.gene28328:intron | 25.0% |
| ! | TTATCATTATAAAATCGCGT+AGG | + | chr4.4:39122003-39122022 | MS.gene28328:intron | 25.0% |
| ! | TTATCCTGACATAAGTTTAT+GGG | + | chr4.4:39121218-39121237 | MS.gene28328:intron | 25.0% |
| ! | TTTACTGTGATTTAGATTCT+TGG | + | chr4.4:39123400-39123419 | MS.gene28328:intron | 25.0% |
| ! | TTTATCCTGACATAAGTTTA+TGG | + | chr4.4:39121217-39121236 | MS.gene28328:intron | 25.0% |
| ! | TTTGAACTATTAGTGACAAT+TGG | + | chr4.4:39120445-39120464 | MS.gene28328:intron | 25.0% |
| !! | AAGGAAGGATTTCTATATTT+TGG | - | chr4.4:39120154-39120173 | None:intergenic | 25.0% |
| !! | AATTTTGTGAGTACAAGAAA+AGG | - | chr4.4:39121674-39121693 | None:intergenic | 25.0% |
| !! | ATTTTGTACTAAGAACTATC+TGG | + | chr4.4:39119159-39119178 | MS.gene28328:intron | 25.0% |
| !! | CTTGCTAACTTTAGAAAAAA+TGG | - | chr4.4:39118734-39118753 | None:intergenic | 25.0% |
| !! | CTTTTCATATTGTATTTGTG+TGG | + | chr4.4:39123707-39123726 | MS.gene28328:intron | 25.0% |
| !! | GAAATTCAGTTTTTGATGAA+AGG | - | chr4.4:39120682-39120701 | None:intergenic | 25.0% |
| !! | GATTTGATAGTACTTATCTA+TGG | + | chr4.4:39122516-39122535 | MS.gene28328:intron | 25.0% |
| !! | GTCTAAAGTAACATATATGA+AGG | - | chr4.4:39120784-39120803 | None:intergenic | 25.0% |
| !! | TATAGCATATCCGATATTTT+TGG | + | chr4.4:39119789-39119808 | MS.gene28328:intron | 25.0% |
| !! | TCACTGAAATTTGATAATAC+AGG | + | chr4.4:39120886-39120905 | MS.gene28328:intron | 25.0% |
| !! | TGAAATTTGATAATACAGGA+AGG | + | chr4.4:39120890-39120909 | MS.gene28328:intron | 25.0% |
| !! | TTGTGATAGTTTTTCTCTTT+CGG | + | chr4.4:39120042-39120061 | MS.gene28328:intron | 25.0% |
| !! | TTTTTCCTCTAAACATTACT+AGG | - | chr4.4:39118847-39118866 | None:intergenic | 25.0% |
| !!! | AAAATTGTTTTGGGAATTTG+GGG | + | chr4.4:39122665-39122684 | MS.gene28328:intron | 25.0% |
| !!! | AAGTGGACTTTCTTTTAAAA+AGG | + | chr4.4:39121701-39121720 | MS.gene28328:intron | 25.0% |
| !!! | AGTGGACTTTCTTTTAAAAA+GGG | + | chr4.4:39121702-39121721 | MS.gene28328:intron | 25.0% |
| !!! | ATTTTTCAAGGTAAAAGATG+CGG | + | chr4.4:39122902-39122921 | MS.gene28328:intron | 25.0% |
| !!! | CTTTTATTTGGTCTATGAAA+AGG | + | chr4.4:39123068-39123087 | MS.gene28328:intron | 25.0% |
| !!! | GAAAATTGTTTTGGGAATTT+GGG | + | chr4.4:39122664-39122683 | MS.gene28328:intron | 25.0% |
| !!! | GAAATTTCTCTCACTTTTAT+TGG | + | chr4.4:39119654-39119673 | MS.gene28328:CDS | 25.0% |
| !!! | TCAACTTTCTTTCTCTTTTT+TGG | - | chr4.4:39123113-39123132 | None:intergenic | 25.0% |
| !!! | TGAAAATTGTTTTGGGAATT+TGG | + | chr4.4:39122663-39122682 | MS.gene28328:intron | 25.0% |
| !!! | TGATTGGTCTATATTTTTCA+AGG | + | chr4.4:39122890-39122909 | MS.gene28328:CDS | 25.0% |
| !!! | TTTCTAAAGTTAGCAAGATA+TGG | + | chr4.4:39118737-39118756 | MS.gene28328:CDS | 25.0% |
| !!! | TTTTAGCCTTTAAATGTATG+AGG | + | chr4.4:39118266-39118285 | MS.gene28328:intron | 25.0% |
| !!! | TTTTATTGGTTTTTCCTTTC+TGG | + | chr4.4:39122233-39122252 | MS.gene28328:CDS | 25.0% |
| AAACAAAATCTCACTTTCCA+CGG | - | chr4.4:39118158-39118177 | None:intergenic | 30.0% | |
| AACATCCAAATAGAAAACGA+CGG | - | chr4.4:39117901-39117920 | None:intergenic | 30.0% | |
| AAGTTGTTGACAACATTGAT+AGG | + | chr4.4:39123916-39123935 | MS.gene28328:CDS | 30.0% | |
| AATTTATTGGAAAAGGGAAG+GGG | + | chr4.4:39123595-39123614 | MS.gene28328:intron | 30.0% | |
| ACTTGTATGTATGAGAATTC+TGG | - | chr4.4:39120574-39120593 | None:intergenic | 30.0% | |
| AGAAACCGTTTGGAAATTTA+AGG | - | chr4.4:39119493-39119512 | None:intergenic | 30.0% | |
| AGAAATTTCCAGAACTTCAT+AGG | - | chr4.4:39119643-39119662 | None:intergenic | 30.0% | |
| AGAAGCCTTAAATTTCCAAA+CGG | + | chr4.4:39119485-39119504 | MS.gene28328:CDS | 30.0% | |
| ATAGAAACCTTTGGTTGAAA+TGG | + | chr4.4:39121097-39121116 | MS.gene28328:intron | 30.0% | |
| ATAGTCCTAGTAATGTTTAG+AGG | + | chr4.4:39118839-39118858 | MS.gene28328:intron | 30.0% | |
| ATGACTTAGAGCATATTGTT+TGG | + | chr4.4:39121121-39121140 | MS.gene28328:intron | 30.0% | |
| ATTCACTTGGTATGAAGAAA+TGG | - | chr4.4:39119056-39119075 | None:intergenic | 30.0% | |
| ATTTAGAGAACTTTGTCTTC+TGG | + | chr4.4:39122392-39122411 | MS.gene28328:intron | 30.0% | |
| CAAGGGGTTTCAAAATATAA+AGG | + | chr4.4:39122851-39122870 | MS.gene28328:CDS | 30.0% | |
| CAAGTATCCTTCTGTAATAA+TGG | - | chr4.4:39123764-39123783 | None:intergenic | 30.0% | |
| CAATTTCCATGTAAGATGTA+TGG | - | chr4.4:39122045-39122064 | None:intergenic | 30.0% | |
| CATGGAAATTGAATATTTGG+TGG | + | chr4.4:39121927-39121946 | MS.gene28328:intron | 30.0% | |
| CGGTGCATAATTTCATTATT+CGG | - | chr4.4:39122131-39122150 | None:intergenic | 30.0% | |
| CTTGTACTCACAAAATTGAT+GGG | + | chr4.4:39121677-39121696 | MS.gene28328:intron | 30.0% | |
| CTTGTATGTATGAGAATTCT+GGG | - | chr4.4:39120573-39120592 | None:intergenic | 30.0% | |
| GAATTTATTGGAAAAGGGAA+GGG | + | chr4.4:39123594-39123613 | MS.gene28328:intron | 30.0% | |
| GAATTTCAACTTCACTAAAC+TGG | + | chr4.4:39119096-39119115 | MS.gene28328:intron | 30.0% | |
| GACAAACCTCATACATTTAA+AGG | - | chr4.4:39118275-39118294 | None:intergenic | 30.0% | |
| GGACAAAATTGACTAACAAA+AGG | - | chr4.4:39118348-39118367 | None:intergenic | 30.0% | |
| GTACAAGATAAATATAAGGG+TGG | + | chr4.4:39121424-39121443 | MS.gene28328:intron | 30.0% | |
| GTTGCCTGTTTATTGAAATA+GGG | + | chr4.4:39123499-39123518 | MS.gene28328:intron | 30.0% | |
| GTTTCAAAATATAAAGGGAC+TGG | + | chr4.4:39122857-39122876 | MS.gene28328:CDS | 30.0% | |
| TAGGTCTTTACTATTGTTGT+TGG | - | chr4.4:39121246-39121265 | None:intergenic | 30.0% | |
| TAGTGACAATTGGTTATATG+GGG | + | chr4.4:39120455-39120474 | MS.gene28328:intron | 30.0% | |
| TCAGTTCACTTTCATACTAA+AGG | - | chr4.4:39121506-39121525 | None:intergenic | 30.0% | |
| TCGTATAAGCTAATAGTTCA+AGG | + | chr4.4:39117954-39117973 | MS.gene28328:CDS | 30.0% | |
| TCTTGTACTCACAAAATTGA+TGG | + | chr4.4:39121676-39121695 | MS.gene28328:intron | 30.0% | |
| TTACTTAGTTAGTTACCTTG+CGG | + | chr4.4:39119990-39120009 | MS.gene28328:intron | 30.0% | |
| TTGAATGCTAATGACATTGA+TGG | + | chr4.4:39118647-39118666 | MS.gene28328:CDS | 30.0% | |
| TTGATAGAAACAACTTCAGA+AGG | - | chr4.4:39123897-39123916 | None:intergenic | 30.0% | |
| TTGCAATTACAGTTCATCTA+TGG | + | chr4.4:39122826-39122845 | MS.gene28328:CDS | 30.0% | |
| TTGGTTATCTGGATTTAAGA+GGG | + | chr4.4:39123618-39123637 | MS.gene28328:intron | 30.0% | |
| TTGTATGTATGAGAATTCTG+GGG | - | chr4.4:39120572-39120591 | None:intergenic | 30.0% | |
| TTTCAGTTTATTATAGGGAC+TGG | + | chr4.4:39119402-39119421 | MS.gene28328:intron | 30.0% | |
| ! | AAGGGATAATTGAAGTATCT+GGG | - | chr4.4:39120262-39120281 | None:intergenic | 30.0% |
| ! | CTAAAACTACGCAAGTTTTA+GGG | - | chr4.4:39117602-39117621 | None:intergenic | 30.0% |
| ! | GGTGTATTTGTTAACTATTC+TGG | + | chr4.4:39121948-39121967 | MS.gene28328:intron | 30.0% |
| ! | TAAGGGATAATTGAAGTATC+TGG | - | chr4.4:39120263-39120282 | None:intergenic | 30.0% |
| ! | TCCTAGTAGTCTTTTATATG+TGG | + | chr4.4:39119349-39119368 | MS.gene28328:intron | 30.0% |
| ! | TGGTTTATTTCTTAGCCATA+AGG | + | chr4.4:39122579-39122598 | MS.gene28328:intron | 30.0% |
| ! | TTCATTTTCTCCCAAAACAA+AGG | + | chr4.4:39123324-39123343 | MS.gene28328:intron | 30.0% |
| !! | ATATAAAAGTGCTTCCAGAA+AGG | - | chr4.4:39122250-39122269 | None:intergenic | 30.0% |
| !! | ATCTCTGAAATCCACAATTA+CGG | + | chr4.4:39119249-39119268 | MS.gene28328:intron | 30.0% |
| !! | CTGTCTTTTGTTGGTTAATT+TGG | + | chr4.4:39118375-39118394 | MS.gene28328:intron | 30.0% |
| !! | GATGTTGATAGTTCCAATAA+TGG | + | chr4.4:39117915-39117934 | MS.gene28328:CDS | 30.0% |
| !! | TATGTGGCATTGATTTACAT+TGG | + | chr4.4:39119365-39119384 | MS.gene28328:intron | 30.0% |
| !! | TGTTTTATTACTTCATCTGC+AGG | + | chr4.4:39119594-39119613 | MS.gene28328:intron | 30.0% |
| !! | TTTCTCTCACTTTTATTGGA+AGG | + | chr4.4:39119658-39119677 | MS.gene28328:CDS | 30.0% |
| !!! | AAGTTTTAGGGTTTGAATCT+TGG | - | chr4.4:39117590-39117609 | None:intergenic | 30.0% |
| !!! | GGCTGGTTTTTTTGTTTTAT+TGG | + | chr4.4:39122219-39122238 | MS.gene28328:CDS | 30.0% |
| !!! | TTGTTTTGGGAGAAAATGAA+GGG | - | chr4.4:39123324-39123343 | None:intergenic | 30.0% |
| !!! | TTTGTTTTGGGAGAAAATGA+AGG | - | chr4.4:39123325-39123344 | None:intergenic | 30.0% |
| !!! | TTTTTCAAGGTAAAAGATGC+GGG | + | chr4.4:39122903-39122922 | MS.gene28328:intron | 30.0% |
| AAAACAAAAAAACCAGCCCA+AGG | - | chr4.4:39122217-39122236 | None:intergenic | 35.0% | |
| AAACTTTGAACTCAGCTTCA+TGG | - | chr4.4:39119330-39119349 | None:intergenic | 35.0% | |
| AAATTTCCAAACGGTTTCTG+TGG | + | chr4.4:39119494-39119513 | MS.gene28328:CDS | 35.0% | |
| AACAAAACTAAAACACCGCA+AGG | - | chr4.4:39120008-39120027 | None:intergenic | 35.0% | |
| AACATTGATAGGTGTAGGTA+TGG | + | chr4.4:39123927-39123946 | MS.gene28328:intron | 35.0% | |
| AACCTCTAGTGTGAAAAACA+GGG | - | chr4.4:39121799-39121818 | None:intergenic | 35.0% | |
| ACAGTTCATCTATGGAACAA+GGG | + | chr4.4:39122834-39122853 | MS.gene28328:CDS | 35.0% | |
| ACTGCCCTATTTCAATAAAC+AGG | - | chr4.4:39123506-39123525 | None:intergenic | 35.0% | |
| ACTTTACTTCTATGTGGACA+TGG | + | chr4.4:39122299-39122318 | MS.gene28328:CDS | 35.0% | |
| AGCAAGATATGGTTTCACAA+AGG | + | chr4.4:39118748-39118767 | MS.gene28328:CDS | 35.0% | |
| AGCAGTTAATACAACCTCAT+TGG | - | chr4.4:39119544-39119563 | None:intergenic | 35.0% | |
| AGTCATTCCATTTCAACCAA+AGG | - | chr4.4:39121107-39121126 | None:intergenic | 35.0% | |
| ATAATCACTGCTAATCAAGG+AGG | - | chr4.4:39119277-39119296 | None:intergenic | 35.0% | |
| ATACACTCAGAGACTATAGT+GGG | + | chr4.4:39118482-39118501 | MS.gene28328:intron | 35.0% | |
| ATTCAAAGTGGTTAGTGGTA+TGG | + | chr4.4:39122559-39122578 | MS.gene28328:intron | 35.0% | |
| CAAAACTCTCTCATTTGTGA+TGG | + | chr4.4:39123218-39123237 | MS.gene28328:intron | 35.0% | |
| CATACAAACTCTTGTACTTG+AGG | + | chr4.4:39119224-39119243 | MS.gene28328:intron | 35.0% | |
| CCAATAATCACTGCTAATCA+AGG | - | chr4.4:39119280-39119299 | None:intergenic | 35.0% | |
| CCAATACACAAACAAGAGTA+CGG | - | chr4.4:39121405-39121424 | None:intergenic | 35.0% | |
| CCTTGATTAGCAGTGATTAT+TGG | + | chr4.4:39119277-39119296 | MS.gene28328:intron | 35.0% | |
| CTGCAAAAGATTTAACCAGA+AGG | - | chr4.4:39122491-39122510 | None:intergenic | 35.0% | |
| CTTGTGACTTTACTTCTATG+TGG | + | chr4.4:39122293-39122312 | MS.gene28328:CDS | 35.0% | |
| GAAAATAAAGTGGCTGCTAA+TGG | - | chr4.4:39120762-39120781 | None:intergenic | 35.0% | |
| GAAATCCTTCCTTTAATTGC+AGG | + | chr4.4:39120161-39120180 | MS.gene28328:intron | 35.0% | |
| GAGAACGTATTGCACTAAAT+TGG | - | chr4.4:39120206-39120225 | None:intergenic | 35.0% | |
| GAGATCTTAAAATTAGACCC+AGG | - | chr4.4:39122783-39122802 | None:intergenic | 35.0% | |
| GCCACATATAAAAGACTACT+AGG | - | chr4.4:39119353-39119372 | None:intergenic | 35.0% | |
| GCTATTTGAAGACACACTTA+GGG | + | chr4.4:39118442-39118461 | MS.gene28328:intron | 35.0% | |
| GGAATTTATTGGAAAAGGGA+AGG | + | chr4.4:39123593-39123612 | MS.gene28328:intron | 35.0% | |
| GGTTGCCTGTTTATTGAAAT+AGG | + | chr4.4:39123498-39123517 | MS.gene28328:intron | 35.0% | |
| GTATATCTTACTGCATGGAT+TGG | + | chr4.4:39121143-39121162 | MS.gene28328:intron | 35.0% | |
| GTGAAGGAAAAGAATCTGTT+AGG | - | chr4.4:39123834-39123853 | None:intergenic | 35.0% | |
| GTGTCTTTCATTACTCAGTT+TGG | + | chr4.4:39118407-39118426 | MS.gene28328:intron | 35.0% | |
| GTTAGGAAAAATATAGCCAC+TGG | + | chr4.4:39119855-39119874 | MS.gene28328:intron | 35.0% | |
| GTTCACTTTCATACTAAAGG+AGG | - | chr4.4:39121503-39121522 | None:intergenic | 35.0% | |
| GTTGGTTATCTGGATTTAAG+AGG | + | chr4.4:39123617-39123636 | MS.gene28328:intron | 35.0% | |
| GTTTGGTATATCTTACTGCA+TGG | + | chr4.4:39121138-39121157 | MS.gene28328:intron | 35.0% | |
| TAAATGGGAGAATGACTCTA+TGG | - | chr4.4:39120927-39120946 | None:intergenic | 35.0% | |
| TACAGTTCATCTATGGAACA+AGG | + | chr4.4:39122833-39122852 | MS.gene28328:CDS | 35.0% | |
| TATGTACCATAAATAGACGC+AGG | - | chr4.4:39120837-39120856 | None:intergenic | 35.0% | |
| TCACAAAATTGATGGGAAAG+TGG | + | chr4.4:39121684-39121703 | MS.gene28328:intron | 35.0% | |
| TCATTACTCAGTTTGGTCTA+TGG | + | chr4.4:39118414-39118433 | MS.gene28328:intron | 35.0% | |
| TCGCTTCCAAATTATTCATC+AGG | + | chr4.4:39120700-39120719 | MS.gene28328:intron | 35.0% | |
| TCTGTAGACAAGTATTCACT+TGG | - | chr4.4:39119069-39119088 | None:intergenic | 35.0% | |
| TCTGTCACATGACAATGAAT+GGG | + | chr4.4:39121973-39121992 | MS.gene28328:intron | 35.0% | |
| TGCTGTTCCATTATTACAGA+AGG | + | chr4.4:39123754-39123773 | MS.gene28328:intron | 35.0% | |
| TGTAATCTGCTCATATCGTT+AGG | + | chr4.4:39119838-39119857 | MS.gene28328:intron | 35.0% | |
| TTATGTCAGGATAAACTTGC+AGG | - | chr4.4:39121212-39121231 | None:intergenic | 35.0% | |
| TTCTGTCACATGACAATGAA+TGG | + | chr4.4:39121972-39121991 | MS.gene28328:intron | 35.0% | |
| TTGACAACATTGATAGGTGT+AGG | + | chr4.4:39123922-39123941 | MS.gene28328:CDS | 35.0% | |
| TTTGAGCCATACATCTTACA+TGG | + | chr4.4:39122036-39122055 | MS.gene28328:intron | 35.0% | |
| TTTGAGTCATACATCGTACA+TGG | + | chr4.4:39121909-39121928 | MS.gene28328:intron | 35.0% | |
| ! | ATAGTAAAGACCTAGCTTGT+AGG | + | chr4.4:39121252-39121271 | MS.gene28328:intron | 35.0% |
| ! | CCTAAAACTACGCAAGTTTT+AGG | - | chr4.4:39117603-39117622 | None:intergenic | 35.0% |
| ! | CCTAAAACTTGCGTAGTTTT+AGG | + | chr4.4:39117600-39117619 | MS.gene28328:CDS | 35.0% |
| ! | CTTTTATATCATCTGCTGCA+AGG | + | chr4.4:39122261-39122280 | MS.gene28328:CDS | 35.0% |
| ! | GCTTCCTTTTTGATACTGTT+TGG | + | chr4.4:39120545-39120564 | MS.gene28328:intron | 35.0% |
| ! | GGTGTGTTTGTTAACTATTC+TGG | + | chr4.4:39122075-39122094 | MS.gene28328:intron | 35.0% |
| ! | GTGAGATATAAGTAGCCTTA+TGG | - | chr4.4:39122597-39122616 | None:intergenic | 35.0% |
| ! | TGCTATTTGAAGACACACTT+AGG | + | chr4.4:39118441-39118460 | MS.gene28328:intron | 35.0% |
| ! | TTGTTGGTTAATTTGGTCCT+CGG | + | chr4.4:39118382-39118401 | MS.gene28328:intron | 35.0% |
| ! | TTTTGATCCCTATATGTCTG+AGG | - | chr4.4:39118514-39118533 | None:intergenic | 35.0% |
| ! | TTTTTGCCTGCGTCTATTTA+TGG | + | chr4.4:39120828-39120847 | MS.gene28328:intron | 35.0% |
| !! | AAGCTCTCTAAAACTTGGAA+GGG | + | chr4.4:39123649-39123668 | MS.gene28328:intron | 35.0% |
| !! | ATCAGAAATTGATGGACTTG+CGG | + | chr4.4:39124075-39124094 | MS.gene28328:CDS | 35.0% |
| !! | GATTTTTCAGTGACCTATGA+AGG | - | chr4.4:39122708-39122727 | None:intergenic | 35.0% |
| !! | TCACTTTTATTGGAAGGTCT+TGG | + | chr4.4:39119664-39119683 | MS.gene28328:CDS | 35.0% |
| !! | TCTATATACAGAAAGTGCCT+GGG | + | chr4.4:39122763-39122782 | MS.gene28328:CDS | 35.0% |
| !! | TTCTATATACAGAAAGTGCC+TGG | + | chr4.4:39122762-39122781 | MS.gene28328:CDS | 35.0% |
| !! | TTCTTCCGTCGTTTTCTATT+TGG | + | chr4.4:39117893-39117912 | MS.gene28328:CDS | 35.0% |
| !!! | AAAACTTGCGTAGTTTTAGG+CGG | + | chr4.4:39117603-39117622 | MS.gene28328:CDS | 35.0% |
| !!! | ACGTTCTCTCAGTTTTAAAG+TGG | + | chr4.4:39120218-39120237 | MS.gene28328:CDS | 35.0% |
| !!! | CTTTTTCAAGATGCTGTGAT+CGG | + | chr4.4:39120960-39120979 | MS.gene28328:CDS | 35.0% |
| !!! | TGTTTTGGGAGAAAATGAAG+GGG | - | chr4.4:39123323-39123342 | None:intergenic | 35.0% |
| AAAAGGGAGATGTGAATTGC+AGG | + | chr4.4:39118577-39118596 | MS.gene28328:intron | 40.0% | |
| AATGGCCTGCAATTAAAGGA+AGG | - | chr4.4:39120169-39120188 | None:intergenic | 40.0% | |
| ACAGGCAGATTTAAACCTCA+AGG | - | chr4.4:39120375-39120394 | None:intergenic | 40.0% | |
| ACATTACAGATGCAACCTGA+GGG | - | chr4.4:39121611-39121630 | None:intergenic | 40.0% | |
| ACCTGCACAAAAATTCAGTC+AGG | - | chr4.4:39124011-39124030 | None:intergenic | 40.0% | |
| ACGTATTGCACTAAATTGGC+AGG | - | chr4.4:39120202-39120221 | None:intergenic | 40.0% | |
| AGCTCTTGAAACTCGGTAAT+TGG | + | chr4.4:39117658-39117677 | MS.gene28328:CDS | 40.0% | |
| ATATAGACCAATCATCCCCT+TGG | - | chr4.4:39122884-39122903 | None:intergenic | 40.0% | |
| ATGAGCAACATTCTCAGAGA+AGG | - | chr4.4:39119448-39119467 | None:intergenic | 40.0% | |
| ATTCTCAGAGAAGGTGAAGT+CGG | - | chr4.4:39119439-39119458 | None:intergenic | 40.0% | |
| CAACAGCTGAATAACAGAAC+AGG | - | chr4.4:39122450-39122469 | None:intergenic | 40.0% | |
| CAACCTCTAGTGTGAAAAAC+AGG | - | chr4.4:39121800-39121819 | None:intergenic | 40.0% | |
| CAGCCACTGTAACAATAAAG+CGG | - | chr4.4:39122151-39122170 | None:intergenic | 40.0% | |
| CAGGCAGATTTAAACCTCAA+GGG | - | chr4.4:39120374-39120393 | None:intergenic | 40.0% | |
| CAGTTCATCTATGGAACAAG+GGG | + | chr4.4:39122835-39122854 | MS.gene28328:CDS | 40.0% | |
| CCAACAAAAGACAGTTTACG+AGG | - | chr4.4:39118369-39118388 | None:intergenic | 40.0% | |
| CCTGCACAAAAATTCAGTCA+GGG | - | chr4.4:39124010-39124029 | None:intergenic | 40.0% | |
| CGTAATTCTGATACACGTTC+AGG | - | chr4.4:39118307-39118326 | None:intergenic | 40.0% | |
| CTAGTGTGAAAAACAGGGAA+AGG | - | chr4.4:39121794-39121813 | None:intergenic | 40.0% | |
| CTGTTCTGTTATTCAGCTGT+TGG | + | chr4.4:39122448-39122467 | MS.gene28328:intron | 40.0% | |
| CTTCGTCCTAGTAATGTGTT+TGG | + | chr4.4:39118686-39118705 | MS.gene28328:CDS | 40.0% | |
| GAAAAATTTGTGACAGCCAG+TGG | - | chr4.4:39119874-39119893 | None:intergenic | 40.0% | |
| GAAACCAAATCTGCAGCAAA+TGG | - | chr4.4:39122745-39122764 | None:intergenic | 40.0% | |
| GATACACTCAGAGACTATAG+TGG | + | chr4.4:39118481-39118500 | MS.gene28328:intron | 40.0% | |
| GATGAATGGCCTGCAATTAA+AGG | - | chr4.4:39120173-39120192 | None:intergenic | 40.0% | |
| GATGGAAGAAAAAGATGCCA+TGG | + | chr4.4:39123236-39123255 | MS.gene28328:intron | 40.0% | |
| GGCAGTCTGGAAAGATTTAA+CGG | + | chr4.4:39123359-39123378 | MS.gene28328:intron | 40.0% | |
| GGGTCCAAACAGTATCAAAA+AGG | - | chr4.4:39120552-39120571 | None:intergenic | 40.0% | |
| GTCGATTGAACGATTACCTT+TGG | - | chr4.4:39117811-39117830 | None:intergenic | 40.0% | |
| GTCTTACAGCTCTTGAAACT+CGG | + | chr4.4:39117651-39117670 | MS.gene28328:CDS | 40.0% | |
| GTGTACAACACACAAATGGT+GGG | - | chr4.4:39121769-39121788 | None:intergenic | 40.0% | |
| GTTTGAATCTTGGAAGCGAT+CGG | - | chr4.4:39117580-39117599 | None:intergenic | 40.0% | |
| TAAACCTCAAGGGAGACTAT+CGG | - | chr4.4:39120364-39120383 | None:intergenic | 40.0% | |
| TACATTACAGATGCAACCTG+AGG | - | chr4.4:39121612-39121631 | None:intergenic | 40.0% | |
| TACTATTTCGAAGGAGTTCG+TGG | + | chr4.4:39124108-39124127 | MS.gene28328:CDS | 40.0% | |
| TATAGACCAATCATCCCCTT+GGG | - | chr4.4:39122883-39122902 | None:intergenic | 40.0% | |
| TCAAAAGCAGATAAGCTGCT+TGG | + | chr4.4:39120983-39121002 | MS.gene28328:CDS | 40.0% | |
| TCATGTGACTGAAAGGTCAT+GGG | - | chr4.4:39121838-39121857 | None:intergenic | 40.0% | |
| TGAAGGGGTAATAGAAACGA+GGG | - | chr4.4:39121581-39121600 | None:intergenic | 40.0% | |
| TGGAAGGTCTTGGATATCAA+AGG | + | chr4.4:39119674-39119693 | MS.gene28328:CDS | 40.0% | |
| TGGCATACCTAAAACATTGC+AGG | + | chr4.4:39123855-39123874 | MS.gene28328:intron | 40.0% | |
| TGTGTACAACACACAAATGG+TGG | - | chr4.4:39121770-39121789 | None:intergenic | 40.0% | |
| TTGAAGGGGTAATAGAAACG+AGG | - | chr4.4:39121582-39121601 | None:intergenic | 40.0% | |
| TTTCAGCATTACCAAGAACC+AGG | + | chr4.4:39124190-39124209 | MS.gene28328:CDS | 40.0% | |
| ! | AAAAGACAAGATTGGCTCCA+TGG | - | chr4.4:39123256-39123275 | None:intergenic | 40.0% |
| ! | ACAGATTCTTTTCCTTCACG+TGG | + | chr4.4:39123835-39123854 | MS.gene28328:intron | 40.0% |
| ! | ACTGAATTTTTGTGCAGGTC+TGG | + | chr4.4:39124012-39124031 | MS.gene28328:intron | 40.0% |
| ! | ATCAGTGCTACTGCTAAGTT+CGG | + | chr4.4:39122622-39122641 | MS.gene28328:intron | 40.0% |
| ! | CCGTACTCTTGTTTGTGTAT+TGG | + | chr4.4:39121402-39121421 | MS.gene28328:intron | 40.0% |
| ! | CCTCGTAAACTGTCTTTTGT+TGG | + | chr4.4:39118366-39118385 | MS.gene28328:intron | 40.0% |
| ! | CTGTAATAATGGAACAGCAC+AGG | - | chr4.4:39123753-39123772 | None:intergenic | 40.0% |
| ! | GACACACTTAGGGATGTTTT+TGG | + | chr4.4:39118452-39118471 | MS.gene28328:intron | 40.0% |
| ! | TTTGTTGTGGAGAAACGAGA+AGG | + | chr4.4:39122175-39122194 | MS.gene28328:CDS | 40.0% |
| ! | TTTTCTCCCAAAACAAAGGC+AGG | + | chr4.4:39123328-39123347 | MS.gene28328:intron | 40.0% |
| !! | ACTTACCTGTTTCTGTATCG+CGG | + | chr4.4:39124146-39124165 | MS.gene28328:CDS | 40.0% |
| !! | CAAGCTCTCTAAAACTTGGA+AGG | + | chr4.4:39123648-39123667 | MS.gene28328:intron | 40.0% |
| !! | CTCTATGCTTTTTGTCCTTC+TGG | + | chr4.4:39122473-39122492 | MS.gene28328:intron | 40.0% |
| !! | GATCCAAGCTCTCTAAAACT+TGG | + | chr4.4:39123644-39123663 | MS.gene28328:intron | 40.0% |
| !! | TTAGCAGTAGCACTGATTTG+TGG | - | chr4.4:39122619-39122638 | None:intergenic | 40.0% |
| !! | TTCCCTGTTTTTCACACTAG+AGG | + | chr4.4:39121794-39121813 | MS.gene28328:intron | 40.0% |
| !! | TTGGATAGAGTGGGTTGAAT+CGG | - | chr4.4:39117697-39117716 | None:intergenic | 40.0% |
| !! | TTTTGGGAATTTGGGGTAAC+AGG | + | chr4.4:39122672-39122691 | MS.gene28328:intron | 40.0% |
| !! | TTTTGGGAGAAAATGAAGGG+GGG | - | chr4.4:39123321-39123340 | None:intergenic | 40.0% |
| !!! | CTTCCAAGTTTTAGAGAGCT+TGG | - | chr4.4:39123650-39123669 | None:intergenic | 40.0% |
| !!! | GTTTTGGGAGAAAATGAAGG+GGG | - | chr4.4:39123322-39123341 | None:intergenic | 40.0% |
| !!! | TCGTTTTGTGCAGTTCTAGA+AGG | + | chr4.4:39117870-39117889 | MS.gene28328:intron | 40.0% |
| !!! | TCTAAGCCTGCCTTTGTTTT+GGG | - | chr4.4:39123337-39123356 | None:intergenic | 40.0% |
| AAACAAAGGCAGGCTTAGAG+AGG | + | chr4.4:39123338-39123357 | MS.gene28328:intron | 45.0% | |
| AAAGTGCACACACACTAGAG+GGG | + | chr4.4:39120600-39120619 | MS.gene28328:intron | 45.0% | |
| AACGATTACCTTTGGCGATG+CGG | - | chr4.4:39117803-39117822 | None:intergenic | 45.0% | |
| AAGCTTCTGCTTGAGCCTTA+AGG | - | chr4.4:39118622-39118641 | None:intergenic | 45.0% | |
| AGGCTTCTTCTGCACAGATA+TGG | - | chr4.4:39119473-39119492 | None:intergenic | 45.0% | |
| AGTAATGAAAGACACGTCCG+AGG | - | chr4.4:39118402-39118421 | None:intergenic | 45.0% | |
| AGTGGTGAAGTTGGATAGAG+TGG | - | chr4.4:39117707-39117726 | None:intergenic | 45.0% | |
| ATCTCGAGCCTATGAAGTTC+TGG | + | chr4.4:39119632-39119651 | MS.gene28328:CDS | 45.0% | |
| ATTACCAAGAACCAGGATGC+CGG | + | chr4.4:39124197-39124216 | MS.gene28328:CDS | 45.0% | |
| CAAAGTGCACACACACTAGA+GGG | + | chr4.4:39120599-39120618 | MS.gene28328:intron | 45.0% | |
| CAATCGACGCGATCTTCTTT+CGG | + | chr4.4:39117823-39117842 | MS.gene28328:intron | 45.0% | |
| CATCCTTCGCATGTTTCCTT+GGG | + | chr4.4:39122198-39122217 | MS.gene28328:CDS | 45.0% | |
| CCAGGACCAAACACATTACT+AGG | - | chr4.4:39118695-39118714 | None:intergenic | 45.0% | |
| CCTAAAACATTGCAGGTTGC+AGG | + | chr4.4:39123862-39123881 | MS.gene28328:intron | 45.0% | |
| CCTAGTAATGTGTTTGGTCC+TGG | + | chr4.4:39118692-39118711 | MS.gene28328:CDS | 45.0% | |
| CTGCTGAGCAGTTGAAAGTT+CGG | - | chr4.4:39120318-39120337 | None:intergenic | 45.0% | |
| GAACTTTGTCTTCTGGACAC+TGG | + | chr4.4:39122399-39122418 | MS.gene28328:intron | 45.0% | |
| GACACCACCTCAGACATATA+GGG | + | chr4.4:39118504-39118523 | MS.gene28328:intron | 45.0% | |
| GCAGAAATCGTCGCCATTAT+TGG | - | chr4.4:39117931-39117950 | None:intergenic | 45.0% | |
| GCTCATAGGTGGAAGAACAT+GGG | - | chr4.4:39121542-39121561 | None:intergenic | 45.0% | |
| GGCTGTGTACAACACACAAA+TGG | - | chr4.4:39121773-39121792 | None:intergenic | 45.0% | |
| GGCTTCTTCTGCACAGATAT+GGG | - | chr4.4:39119472-39119491 | None:intergenic | 45.0% | |
| GGTGCCCATAAACTTATGTC+AGG | - | chr4.4:39121225-39121244 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+TGG | - | chr4.4:39121839-39121858 | None:intergenic | 45.0% | |
| GTGCAGTTGCAGAACTTCAA+TGG | + | chr4.4:39123964-39123983 | MS.gene28328:intron | 45.0% | |
| GTGGTGAAGTTGGATAGAGT+GGG | - | chr4.4:39117706-39117725 | None:intergenic | 45.0% | |
| GTTTGATCGAGATAAACCGC+TGG | + | chr4.4:39118127-39118146 | MS.gene28328:CDS | 45.0% | |
| TATTGGAAAAGGGAAGGGGT+TGG | + | chr4.4:39123599-39123618 | MS.gene28328:intron | 45.0% | |
| TCAAAGTGCACACACACTAG+AGG | + | chr4.4:39120598-39120617 | MS.gene28328:intron | 45.0% | |
| TCAAGGAGGATCCGTAATTG+TGG | - | chr4.4:39119263-39119282 | None:intergenic | 45.0% | |
| TGATCCCTATATGTCTGAGG+TGG | - | chr4.4:39118511-39118530 | None:intergenic | 45.0% | |
| TGCTCATAGGTGGAAGAACA+TGG | - | chr4.4:39121543-39121562 | None:intergenic | 45.0% | |
| TGCTGAGCAGTTGAAAGTTC+GGG | - | chr4.4:39120317-39120336 | None:intergenic | 45.0% | |
| TTAGGCGGAAGAGGATTCAT+CGG | + | chr4.4:39117618-39117637 | MS.gene28328:CDS | 45.0% | |
| TTGGCAGGAAGCTTGATGAA+TGG | - | chr4.4:39120187-39120206 | None:intergenic | 45.0% | |
| TTTGGCGATGCGGTGTTTAT+CGG | - | chr4.4:39117793-39117812 | None:intergenic | 45.0% | |
| ! | AACCTGAGGGTATGCTTTGA+AGG | - | chr4.4:39121598-39121617 | None:intergenic | 45.0% |
| ! | ACCTAGCTTGTAGGCTTGTT+GGG | + | chr4.4:39121261-39121280 | MS.gene28328:intron | 45.0% |
| ! | ACCTGAGGGTATGCTTTGAA+GGG | - | chr4.4:39121597-39121616 | None:intergenic | 45.0% |
| ! | ACGACCATTTGCTGCAGATT+TGG | + | chr4.4:39122738-39122757 | MS.gene28328:intron | 45.0% |
| ! | AGGTCTGGTCTTCGCATTTA+TGG | + | chr4.4:39124027-39124046 | MS.gene28328:intron | 45.0% |
| ! | CAGTGGCTGACATTTTGTTG+TGG | + | chr4.4:39122162-39122181 | MS.gene28328:intron | 45.0% |
| ! | CCCTGACTGAATTTTTGTGC+AGG | + | chr4.4:39124007-39124026 | MS.gene28328:intron | 45.0% |
| ! | CCTGCAACCTGCAATGTTTT+AGG | - | chr4.4:39123865-39123884 | None:intergenic | 45.0% |
| ! | GCACCGCTTTATTGTTACAG+TGG | + | chr4.4:39122145-39122164 | MS.gene28328:intron | 45.0% |
| ! | GCATACACGTACAGCTTTGA+CGG | - | chr4.4:39122332-39122351 | None:intergenic | 45.0% |
| ! | TCACACTAGAGGTTGTTTCC+AGG | + | chr4.4:39121805-39121824 | MS.gene28328:intron | 45.0% |
| ! | TCAGTGCTACTGCTAAGTTC+GGG | + | chr4.4:39122623-39122642 | MS.gene28328:intron | 45.0% |
| !! | AATATAAAGGGACTGGCCCA+AGG | + | chr4.4:39122864-39122883 | MS.gene28328:CDS | 45.0% |
| !! | ATATAAAGGGACTGGCCCAA+GGG | + | chr4.4:39122865-39122884 | MS.gene28328:CDS | 45.0% |
| !! | CTCTAAGCCTGCCTTTGTTT+TGG | - | chr4.4:39123338-39123357 | None:intergenic | 45.0% |
| !! | GTTTTAGGTATGCCACGTGA+AGG | - | chr4.4:39123850-39123869 | None:intergenic | 45.0% |
| !! | ATAATAAATTTAATTAGAAT+AGG | - | chr4.4:39122975-39122994 | None:intergenic | 5.0% |
| AACGGTTTCTGTGGCTGGAA+AGG | + | chr4.4:39119503-39119522 | MS.gene28328:CDS | 50.0% | |
| AAGCTGCTTGGCAGTGGAAA+AGG | + | chr4.4:39120995-39121014 | MS.gene28328:CDS | 50.0% | |
| AAGGTCATGGGTTCAAGTCC+TGG | - | chr4.4:39121826-39121845 | None:intergenic | 50.0% | |
| AATACGGTTGTTGCCTGCTG+CGG | - | chr4.4:39120084-39120103 | None:intergenic | 50.0% | |
| ACTTTCCACGGATATGCCAG+CGG | - | chr4.4:39118146-39118165 | None:intergenic | 50.0% | |
| AGAAGCCGCGATACAGAAAC+AGG | - | chr4.4:39124154-39124173 | None:intergenic | 50.0% | |
| AGGCTCGCATCTTCCTTCAT+AGG | + | chr4.4:39122692-39122711 | MS.gene28328:intron | 50.0% | |
| ATAAACCGCTGGCATATCCG+TGG | + | chr4.4:39118138-39118157 | MS.gene28328:CDS | 50.0% | |
| ATGAAGGGGGGAAAGAAGAC+TGG | - | chr4.4:39123309-39123328 | None:intergenic | 50.0% | |
| GAGATTCGGAGTGGTGAAGT+TGG | - | chr4.4:39117716-39117735 | None:intergenic | 50.0% | |
| GATAAACACCGCATCGCCAA+AGG | + | chr4.4:39117792-39117811 | MS.gene28328:CDS | 50.0% | |
| GCATCCTTCGCATGTTTCCT+TGG | + | chr4.4:39122197-39122216 | MS.gene28328:CDS | 50.0% | |
| GGACACCACCTCAGACATAT+AGG | + | chr4.4:39118503-39118522 | MS.gene28328:intron | 50.0% | |
| GGCACAAATTCTGTGTCACC+AGG | - | chr4.4:39118713-39118732 | None:intergenic | 50.0% | |
| GTATCGCGGCTTCTGCATTA+TGG | + | chr4.4:39124160-39124179 | MS.gene28328:CDS | 50.0% | |
| GTTTATCGGTGAGGTCGAGA+TGG | - | chr4.4:39117779-39117798 | None:intergenic | 50.0% | |
| TCCCAACAAGCCTACAAGCT+AGG | - | chr4.4:39121265-39121284 | None:intergenic | 50.0% | |
| TCTGCAGCAAATGGTCGTAC+AGG | - | chr4.4:39122736-39122755 | None:intergenic | 50.0% | |
| TGCTTGGCAGTGGAAAAGGT+TGG | + | chr4.4:39120999-39121018 | MS.gene28328:intron | 50.0% | |
| TTCCAAACGGTTTCTGTGGC+TGG | + | chr4.4:39119498-39119517 | MS.gene28328:CDS | 50.0% | |
| TTCCAGCCACAGAAACCGTT+TGG | - | chr4.4:39119503-39119522 | None:intergenic | 50.0% | |
| ! | GACCTAGCTTGTAGGCTTGT+TGG | + | chr4.4:39121260-39121279 | MS.gene28328:intron | 50.0% |
| ! | TGTCCTTGGTGTGTGCTCAT+AGG | - | chr4.4:39121556-39121575 | None:intergenic | 50.0% |
| !! | AAGGGAAGGGGTTGGTTATC+TGG | + | chr4.4:39123607-39123626 | MS.gene28328:intron | 50.0% |
| !! | CCTGAGGGTATGCTTTGAAG+GGG | - | chr4.4:39121596-39121615 | None:intergenic | 50.0% |
| !! | TAGAAACGAGGGAGTGTCCT+TGG | - | chr4.4:39121570-39121589 | None:intergenic | 50.0% |
| !! | TATAAAGGGACTGGCCCAAG+GGG | + | chr4.4:39122866-39122885 | MS.gene28328:CDS | 50.0% |
| !!! | TGCGTAGTTTTAGGCGGAAG+AGG | + | chr4.4:39117609-39117628 | MS.gene28328:CDS | 50.0% |
| AAGAAGAGAGAGCTTCGGCG+AGG | - | chr4.4:39117740-39117759 | None:intergenic | 55.0% | |
| AGCTTCGGCGAGGAGAGATT+CGG | - | chr4.4:39117730-39117749 | None:intergenic | 55.0% | |
| CAGCCCAAGGAAACATGCGA+AGG | - | chr4.4:39122204-39122223 | None:intergenic | 55.0% | |
| CCACCTATGAGCACACACCA+AGG | + | chr4.4:39121550-39121569 | MS.gene28328:intron | 55.0% | |
| CCCCTTCAAAGCATACCCTC+AGG | + | chr4.4:39121593-39121612 | MS.gene28328:intron | 55.0% | |
| CGAGATGGACGTAAGAAGCG+CGG | - | chr4.4:39117764-39117783 | None:intergenic | 55.0% | |
| CGATGCGGTGTTTATCGGTG+AGG | - | chr4.4:39117788-39117807 | None:intergenic | 55.0% | |
| CGTTGCACAAAGCTCCTGCA+GGG | + | chr4.4:39121730-39121749 | MS.gene28328:intron | 55.0% | |
| CTTCGCATGTTTCCTTGGGC+TGG | + | chr4.4:39122202-39122221 | MS.gene28328:CDS | 55.0% | |
| GCAGATAAGCTGCTTGGCAG+TGG | + | chr4.4:39120989-39121008 | MS.gene28328:CDS | 55.0% | |
| GCGGGAAGAAGAGAGAGCTT+CGG | - | chr4.4:39117745-39117764 | None:intergenic | 55.0% | |
| GCTACTTCATTCACCGCAGC+AGG | + | chr4.4:39120068-39120087 | MS.gene28328:intron | 55.0% | |
| ! | CCTGCAGGAGCTTTGTGCAA+CGG | - | chr4.4:39121732-39121751 | None:intergenic | 55.0% |
| ! | CCTTGGTGTGTGCTCATAGG+TGG | - | chr4.4:39121553-39121572 | None:intergenic | 55.0% |
| ! | CTGCAGGAGCTTTGTGCAAC+GGG | - | chr4.4:39121731-39121750 | None:intergenic | 55.0% |
| ! | GAGATGGACGTAAGAAGCGC+GGG | - | chr4.4:39117763-39117782 | None:intergenic | 55.0% |
| ACAAAGCTCCTGCAGGGTCC+GGG | + | chr4.4:39121736-39121755 | MS.gene28328:intron | 60.0% | |
| CACAAAGCTCCTGCAGGGTC+CGG | + | chr4.4:39121735-39121754 | MS.gene28328:intron | 60.0% | |
| CCGTTGCACAAAGCTCCTGC+AGG | + | chr4.4:39121729-39121748 | MS.gene28328:intron | 60.0% | |
| CTCAGATCTTGCCGGCATCC+TGG | - | chr4.4:39124211-39124230 | None:intergenic | 60.0% | |
| GCAGGCTTAGAGAGGCAGTC+TGG | + | chr4.4:39123346-39123365 | MS.gene28328:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4.4:39121757-39121776 | None:intergenic | 60.0% |
| ! | CGCACCGATAGTCTCCCTTG+AGG | + | chr4.4:39120357-39120376 | MS.gene28328:CDS | 60.0% |
| ! | CTTGCCGGCATCCTGGTTCT+TGG | - | chr4.4:39124204-39124223 | None:intergenic | 60.0% |
| ! | GACTGGCCCAAGGGGATGAT+TGG | + | chr4.4:39122874-39122893 | MS.gene28328:CDS | 60.0% |
| CGGCGAGGAGAGATTCGGAG+TGG | - | chr4.4:39117725-39117744 | None:intergenic | 65.0% | |
| AGCTCCTGCAGGGTCCGGGA+AGG | + | chr4.4:39121740-39121759 | MS.gene28328:intron | 70.0% | |
| CTCCTGCAGGGTCCGGGAAG+GGG | + | chr4.4:39121742-39121761 | MS.gene28328:intron | 70.0% | |
| GCTCCTGCAGGGTCCGGGAA+GGG | + | chr4.4:39121741-39121760 | MS.gene28328:intron | 70.0% | |
| GACCCCTTCCCGGACCCTGC+AGG | - | chr4.4:39121747-39121766 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 39117564 | 39124234 | 39117564 | ID=MS.gene28328 |
| chr4.4 | mRNA | 39117564 | 39124234 | 39117564 | ID=MS.gene28328.t1;Parent=MS.gene28328 |
| chr4.4 | exon | 39117564 | 39117813 | 39117564 | ID=MS.gene28328.t1.exon1;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39117564 | 39117813 | 39117564 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39117883 | 39117975 | 39117883 | ID=MS.gene28328.t1.exon2;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39117883 | 39117975 | 39117883 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39118051 | 39118163 | 39118051 | ID=MS.gene28328.t1.exon3;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39118051 | 39118163 | 39118051 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39118599 | 39118769 | 39118599 | ID=MS.gene28328.t1.exon4;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39118599 | 39118769 | 39118599 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39119408 | 39119524 | 39119408 | ID=MS.gene28328.t1.exon5;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39119408 | 39119524 | 39119408 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39119616 | 39119695 | 39119616 | ID=MS.gene28328.t1.exon6;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39119616 | 39119695 | 39119616 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39120183 | 39120378 | 39120183 | ID=MS.gene28328.t1.exon7;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39120183 | 39120378 | 39120183 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39120908 | 39121016 | 39120908 | ID=MS.gene28328.t1.exon8;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39120908 | 39121016 | 39120908 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39122165 | 39122339 | 39122165 | ID=MS.gene28328.t1.exon9;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39122165 | 39122339 | 39122165 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39122755 | 39122911 | 39122755 | ID=MS.gene28328.t1.exon10;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39122755 | 39122911 | 39122755 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39123877 | 39123943 | 39123877 | ID=MS.gene28328.t1.exon11;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39123877 | 39123943 | 39123877 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| chr4.4 | exon | 39124029 | 39124234 | 39124029 | ID=MS.gene28328.t1.exon12;Parent=MS.gene28328.t1 |
| chr4.4 | CDS | 39124029 | 39124234 | 39124029 | ID=cds.MS.gene28328.t1;Parent=MS.gene28328.t1 |
| Gene Sequence |
| Protein sequence |
