Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42650.t1 | XP_003603241.2 | 99 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 1.50E-282 | 981.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42650.t1 | Q67ZE1 | 71.1 | 492 | 140 | 1 | 2 | 493 | 5 | 494 | 2.0e-208 | 726.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42650.t1 | A0A072V3H3 | 99.0 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 1.1e-282 | 981.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42650 | MS.gene056394 | PPI |
| MS.gene42650 | MS.gene056596 | PPI |
| MS.gene42650 | MS.gene056594 | PPI |
| MS.gene42650 | MS.gene003869 | PPI |
| MS.gene42650 | MS.gene46874 | PPI |
| MS.gene42650 | MS.gene28328 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42650.t1 | MTR_3g105440 | 98.986 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 0.0 | 1014 |
| MS.gene42650.t1 | MTR_3g105440 | 98.986 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 0.0 | 1013 |
| MS.gene42650.t1 | MTR_4g068110 | 42.798 | 486 | 263 | 7 | 9 | 493 | 16 | 487 | 1.12e-124 | 374 |
| MS.gene42650.t1 | MTR_4g068110 | 42.798 | 486 | 263 | 7 | 9 | 493 | 16 | 487 | 3.42e-124 | 374 |
| MS.gene42650.t1 | MTR_1g026540 | 33.854 | 384 | 217 | 12 | 10 | 372 | 15 | 382 | 1.48e-47 | 171 |
| MS.gene42650.t1 | MTR_1g026540 | 35.088 | 285 | 162 | 8 | 105 | 372 | 15 | 293 | 4.97e-41 | 152 |
| MS.gene42650.t1 | MTR_3g101500 | 26.761 | 355 | 211 | 14 | 10 | 352 | 5 | 322 | 1.13e-19 | 90.5 |
| MS.gene42650.t1 | MTR_2g073240 | 30.204 | 245 | 146 | 9 | 1 | 231 | 13 | 246 | 2.71e-16 | 82.4 |
| MS.gene42650.t1 | MTR_0034s0060 | 29.388 | 245 | 148 | 9 | 1 | 231 | 131 | 364 | 6.81e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42650.t1 | AT2G26260 | 71.138 | 492 | 140 | 1 | 2 | 493 | 5 | 494 | 0.0 | 755 |
| MS.gene42650.t1 | AT1G47290 | 67.338 | 447 | 126 | 3 | 6 | 449 | 9 | 438 | 0.0 | 635 |
| MS.gene42650.t1 | AT2G26260 | 72.346 | 405 | 110 | 1 | 89 | 493 | 1 | 403 | 0.0 | 632 |
| MS.gene42650.t1 | AT1G47290 | 74.451 | 364 | 93 | 0 | 6 | 369 | 9 | 372 | 0.0 | 593 |
| MS.gene42650.t1 | AT2G43420 | 42.798 | 486 | 266 | 5 | 9 | 493 | 15 | 489 | 2.01e-131 | 392 |
| MS.gene42650.t1 | AT2G33630 | 31.759 | 381 | 227 | 9 | 10 | 372 | 15 | 380 | 2.55e-43 | 160 |
| MS.gene42650.t1 | AT4G33360 | 26.230 | 366 | 212 | 15 | 10 | 360 | 16 | 338 | 1.86e-17 | 84.0 |
| MS.gene42650.t1 | AT4G33360 | 25.978 | 358 | 210 | 14 | 10 | 352 | 4 | 321 | 2.57e-17 | 83.6 |
| MS.gene42650.t1 | AT1G53500 | 29.661 | 236 | 141 | 9 | 10 | 231 | 12 | 236 | 1.48e-15 | 80.1 |
| MS.gene42650.t1 | AT3G14790 | 29.388 | 245 | 148 | 9 | 1 | 231 | 4 | 237 | 2.69e-15 | 79.3 |
| MS.gene42650.t1 | AT3G14790 | 29.388 | 245 | 148 | 9 | 1 | 231 | 1 | 234 | 3.01e-15 | 79.0 |
| MS.gene42650.t1 | AT4G33360 | 25.680 | 331 | 182 | 14 | 5 | 315 | 11 | 297 | 7.40e-13 | 69.7 |
Find 117 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTGCAGAAGGGAATAAT+TGG | 0.171596 | 3.4:-92196267 | MS.gene42650:CDS |
| GGCATATTTCATTACGAATA+TGG | 0.231821 | 3.4:-92199227 | MS.gene42650:CDS |
| ATGAACTCCCAAAACTTTAT+AGG | 0.247483 | 3.4:+92199202 | None:intergenic |
| GGAGTTCATGTCTCTAATTT+TGG | 0.253874 | 3.4:-92199188 | MS.gene42650:CDS |
| ATATGGAACCTATAAAGTTT+TGG | 0.301633 | 3.4:-92199210 | MS.gene42650:CDS |
| AACAAACCTCAACTCTTAAA+AGG | 0.319878 | 3.4:-92201058 | MS.gene42650:intron |
| CTTTCTCAGTTGCCTCATCT+TGG | 0.333806 | 3.4:-92196315 | MS.gene42650:CDS |
| CTGTGTCCGCATCGCCGATT+TGG | 0.334227 | 3.4:-92201176 | MS.gene42650:CDS |
| TAGTTGTTTATAGAAGAATT+TGG | 0.351116 | 3.4:+92200923 | None:intergenic |
| GGATTGGTTATTAAGGCTAA+TGG | 0.351234 | 3.4:-92200428 | MS.gene42650:CDS |
| GGGTGAGGGATTGGTTATTA+AGG | 0.352725 | 3.4:-92200435 | MS.gene42650:CDS |
| CTTGAACCCTCTGAGCAATT+AGG | 0.355569 | 3.4:-92201139 | MS.gene42650:CDS |
| TTCTCTTACCAGTTCATTGT+TGG | 0.367722 | 3.4:-92200012 | MS.gene42650:intron |
| TATCATGCCAATTGCACATT+TGG | 0.370214 | 3.4:-92198100 | MS.gene42650:CDS |
| TTAATCTCTGCAGCATTTGA+AGG | 0.382000 | 3.4:-92200974 | MS.gene42650:intron |
| TCGATCGGTTTATTCATTCA+TGG | 0.385542 | 3.4:-92196745 | MS.gene42650:CDS |
| GGAATTCATGGAATTCATAA+TGG | 0.386447 | 3.4:-92200711 | MS.gene42650:CDS |
| TGCTTCACCTTCAACATTGA+CGG | 0.391665 | 3.4:+92200886 | None:intergenic |
| TATAGGCTGCTTGGCCCATA+TGG | 0.393052 | 3.4:-92198066 | MS.gene42650:CDS |
| TCCAAAGCTTCTGTATATCT+TGG | 0.393295 | 3.4:-92197485 | MS.gene42650:CDS |
| TCCAAGATATACAGAAGCTT+TGG | 0.397177 | 3.4:+92197484 | None:intergenic |
| CACTCCACCAAATGTGCAAT+TGG | 0.401026 | 3.4:+92198093 | None:intergenic |
| TGAGGCACCTTCATTCCATA+TGG | 0.412154 | 3.4:+92198051 | None:intergenic |
| GATGTGAGTCTTATTCTTGA+AGG | 0.416433 | 3.4:+92198021 | None:intergenic |
| CATCATTCCGTCAATGTTGA+AGG | 0.420093 | 3.4:-92200893 | MS.gene42650:intron |
| CATGCCAATTGCACATTTGG+TGG | 0.425591 | 3.4:-92198097 | MS.gene42650:CDS |
| TGTGTCCGCATCGCCGATTT+GGG | 0.426692 | 3.4:-92201175 | MS.gene42650:CDS |
| TAAACTGTTGGTGCCTTCAT+TGG | 0.429069 | 3.4:-92200348 | MS.gene42650:CDS |
| TCTGAGCAATTAGGTCTTCT+CGG | 0.432974 | 3.4:-92201130 | MS.gene42650:CDS |
| GATTGGTTATTAAGGCTAAT+GGG | 0.435448 | 3.4:-92200427 | MS.gene42650:CDS |
| TTGGTTGATGCTGCAAAGGC+AGG | 0.438220 | 3.4:-92200329 | MS.gene42650:CDS |
| CTCAGAGGGTTCAAGTTCAA+TGG | 0.441397 | 3.4:+92201147 | None:intergenic |
| AAGAATTTGGAGCAGCCATA+TGG | 0.444848 | 3.4:+92200936 | None:intergenic |
| ATCGTTGCCTTATCCACCTT+CGG | 0.448632 | 3.4:-92200682 | MS.gene42650:intron |
| ATTTGGTGGAGTGGATATAT+AGG | 0.449440 | 3.4:-92198083 | MS.gene42650:CDS |
| CAGAACCTGTAGAGGTATGA+TGG | 0.450369 | 3.4:+92197945 | None:intergenic |
| AGCAGCAAAGCCTCGTCCTC+CGG | 0.454833 | 3.4:+92201237 | None:intergenic |
| TACCAGTTCATTGTTGGTGA+TGG | 0.464034 | 3.4:-92200006 | MS.gene42650:intron |
| TTCAATGGTGGATCCCAAAT+CGG | 0.464651 | 3.4:+92201162 | None:intergenic |
| TAAAGCCGAGGGTGAGGGAT+TGG | 0.474854 | 3.4:-92200444 | MS.gene42650:CDS |
| TTTGATTATGGCGGCGGCGG+AGG | 0.475500 | 3.4:-92201278 | None:intergenic |
| GTAGGTACCGAAGGTGGATA+AGG | 0.477922 | 3.4:+92200675 | None:intergenic |
| GTATATCTTGGAAGTGGAAG+AGG | 0.485555 | 3.4:-92197473 | MS.gene42650:intron |
| CAGTTGCTGACACGTTGCTT+TGG | 0.485790 | 3.4:-92196882 | MS.gene42650:CDS |
| AGCAACTAAAGCCGAGGGTG+AGG | 0.494138 | 3.4:-92200450 | MS.gene42650:CDS |
| AGGTTTGTTGCGAAGATCGA+CGG | 0.502657 | 3.4:+92201072 | None:intergenic |
| TGCACCCATCATACCTCTAC+AGG | 0.507092 | 3.4:-92197950 | MS.gene42650:intron |
| GCATTTGATTATGGCGGCGG+CGG | 0.508585 | 3.4:-92201281 | None:intergenic |
| GAAAGGTGGTGTGTGGTCAC+CGG | 0.510184 | 3.4:-92201256 | MS.gene42650:CDS |
| AAGATATACAGAAGCTTTGG+AGG | 0.510237 | 3.4:+92197487 | None:intergenic |
| TCGAATCATATCCACATTTG+AGG | 0.511233 | 3.4:-92197544 | MS.gene42650:CDS |
| TGCTGACACGTTGCTTTGGA+AGG | 0.511938 | 3.4:-92196878 | MS.gene42650:CDS |
| TGTGTGGTCACCGGAGGACG+AGG | 0.512379 | 3.4:-92201247 | MS.gene42650:CDS |
| ATGTGAGTCTTATTCTTGAA+GGG | 0.515692 | 3.4:+92198022 | None:intergenic |
| GCTTCTGTATATCTTGGAAG+TGG | 0.518379 | 3.4:-92197479 | MS.gene42650:CDS |
| TTGAGAAAATGCCCACATCA+TGG | 0.518767 | 3.4:-92196372 | MS.gene42650:CDS |
| GCAACTAAAGCCGAGGGTGA+GGG | 0.520116 | 3.4:-92200449 | MS.gene42650:CDS |
| TTTGCAGCATCAACCAATGA+AGG | 0.520481 | 3.4:+92200335 | None:intergenic |
| TGCAGCATTTGAAGGAGTTG+AGG | 0.521031 | 3.4:-92200966 | MS.gene42650:intron |
| CCAATTATTCCCTTCTGCAA+GGG | 0.522767 | 3.4:+92196267 | None:intergenic |
| CCCAATTATTCCCTTCTGCA+AGG | 0.526936 | 3.4:+92196266 | None:intergenic |
| ACTGCATTTGATTATGGCGG+CGG | 0.527486 | 3.4:-92201284 | None:intergenic |
| GAGCTCGATCAGCACATATG+TGG | 0.527742 | 3.4:+92199938 | None:intergenic |
| TGGAAGGTCTTGGATATCAA+AGG | 0.529691 | 3.4:-92199168 | MS.gene42650:intron |
| CCTTGCAGAAGGGAATAATT+GGG | 0.540074 | 3.4:-92196266 | MS.gene42650:CDS |
| TTATGGCGGCGGCGGAGGAA+AGG | 0.542684 | 3.4:-92201273 | MS.gene42650:CDS |
| TGGCGGCGGCGGAGGAAAGG+TGG | 0.543511 | 3.4:-92201270 | MS.gene42650:CDS |
| CGAATCATATCCACATTTGA+GGG | 0.546936 | 3.4:-92197543 | MS.gene42650:CDS |
| CTTCTATTATACTCATCGAT+CGG | 0.547051 | 3.4:-92196760 | MS.gene42650:CDS |
| TTCATTGGTTGATGCTGCAA+AGG | 0.548711 | 3.4:-92200333 | MS.gene42650:CDS |
| TAGGGCGTATGCAACATGTC+AGG | 0.552269 | 3.4:+92200393 | None:intergenic |
| ATTGGCATGATAACAAAGAC+AGG | 0.553368 | 3.4:+92198111 | None:intergenic |
| GAGTGGATATATAGGCTGCT+TGG | 0.554338 | 3.4:-92198075 | MS.gene42650:CDS |
| GGACACAGTAGGTGTTCAAT+CGG | 0.555516 | 3.4:+92201191 | None:intergenic |
| AAGACAGGGATCTTTATGCT+TGG | 0.556912 | 3.4:+92198126 | None:intergenic |
| CTTTGTAAGAGCAGTAATGA+AGG | 0.563257 | 3.4:+92196783 | None:intergenic |
| CAACTTAAGTCTAAAAGAGA+AGG | 0.566200 | 3.4:-92197512 | MS.gene42650:CDS |
| GCATTAAAATCCCTTGCAGA+AGG | 0.567802 | 3.4:-92196277 | MS.gene42650:CDS |
| TGGACCTGGTGATAAACTGT+TGG | 0.573810 | 3.4:-92200360 | MS.gene42650:CDS |
| GCTTGGCCCATATGGAATGA+AGG | 0.577124 | 3.4:-92198058 | MS.gene42650:CDS |
| TTTCACATATGTTGAAAATG+TGG | 0.577379 | 3.4:-92199968 | MS.gene42650:CDS |
| GAGGCACCTTCATTCCATAT+GGG | 0.580167 | 3.4:+92198052 | None:intergenic |
| AGAAGACCTAATTGCTCAGA+GGG | 0.584128 | 3.4:+92201133 | None:intergenic |
| GGCGGAGGAAAGGTGGTGTG+TGG | 0.587912 | 3.4:-92201263 | MS.gene42650:CDS |
| CACAGCAAAATTCCAAGATG+AGG | 0.589243 | 3.4:+92196303 | None:intergenic |
| TGATCGAGCTCTAGCTTCAG+AGG | 0.590757 | 3.4:-92199926 | MS.gene42650:CDS |
| TGTGAGTCTTATTCTTGAAG+GGG | 0.592528 | 3.4:+92198023 | None:intergenic |
| CATTAAAATCCCTTGCAGAA+GGG | 0.592814 | 3.4:-92196276 | MS.gene42650:CDS |
| AGAACCTGTAGAGGTATGAT+GGG | 0.594321 | 3.4:+92197946 | None:intergenic |
| AGCTCGATCAGCACATATGT+GGG | 0.596317 | 3.4:+92199939 | None:intergenic |
| GTATGATGGGTGCATAGTCA+AGG | 0.599231 | 3.4:+92197959 | None:intergenic |
| CATTGACGGAATGATGAAGC+TGG | 0.600987 | 3.4:+92200900 | None:intergenic |
| GGAGACATATTGAGCACGAC+CGG | 0.604728 | 3.4:+92201093 | None:intergenic |
| AATAACCAATCCCTCACCCT+CGG | 0.605731 | 3.4:+92200439 | None:intergenic |
| TTACTCAGCAACTAAAGCCG+AGG | 0.607635 | 3.4:-92200456 | MS.gene42650:CDS |
| ATTCTTGAAGGGGTCAGCTG+AGG | 0.610389 | 3.4:+92198033 | None:intergenic |
| AGGTGGTGTGTGGTCACCGG+AGG | 0.612663 | 3.4:-92201253 | MS.gene42650:CDS |
| TGGTTGATGCTGCAAAGGCA+GGG | 0.613832 | 3.4:-92200328 | MS.gene42650:CDS |
| CTCGGTCAAGCTTTACACTC+CGG | 0.614278 | 3.4:-92201112 | MS.gene42650:CDS |
| ATTAAGGCTAATGGGACTAG+TGG | 0.621571 | 3.4:-92200419 | MS.gene42650:CDS |
| GAGAAGACCTAATTGCTCAG+AGG | 0.625054 | 3.4:+92201132 | None:intergenic |
| CAATTGCACATTTGGTGGAG+TGG | 0.628998 | 3.4:-92198092 | MS.gene42650:CDS |
| AGAGGGTTCAAGTTCAATGG+TGG | 0.630912 | 3.4:+92201150 | None:intergenic |
| GGCACCAACAGTTTATCACC+AGG | 0.633574 | 3.4:+92200356 | None:intergenic |
| TACTCAGCAACTAAAGCCGA+GGG | 0.636180 | 3.4:-92200455 | MS.gene42650:CDS |
| GATCGAGCTCTAGCTTCAGA+GGG | 0.640107 | 3.4:-92199925 | MS.gene42650:CDS |
| GGTAAAGTAGGTACCGAAGG+TGG | 0.641463 | 3.4:+92200669 | None:intergenic |
| AAACGTCACAGAACCTGTAG+AGG | 0.648903 | 3.4:+92197937 | None:intergenic |
| TGATAAGTGAAACCATGATG+TGG | 0.662199 | 3.4:+92196360 | None:intergenic |
| AGATATACAGAAGCTTTGGA+GGG | 0.663079 | 3.4:+92197488 | None:intergenic |
| ATCGGCGATGCGGACACAGT+AGG | 0.665728 | 3.4:+92201180 | None:intergenic |
| TGCAAAGGCAGGGAAATCCA+AGG | 0.678227 | 3.4:-92200318 | MS.gene42650:intron |
| TGGATCCCAAATCGGCGATG+CGG | 0.678949 | 3.4:+92201170 | None:intergenic |
| GATAAGTGAAACCATGATGT+GGG | 0.683459 | 3.4:+92196361 | None:intergenic |
| TCTTGCAGGAGGGCATACGG+AGG | 0.702619 | 3.4:-92197571 | MS.gene42650:intron |
| TTGGCATGATAACAAAGACA+GGG | 0.735805 | 3.4:+92198112 | None:intergenic |
| TGATGGGTGCATAGTCAAGG+CGG | 0.737283 | 3.4:+92197962 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAATATAAACATAATTA+TGG | - | chr3.4:92199054-92199073 | MS.gene42650:intron | 10.0% |
| !! | ATATTAAAAAAAAAAAACGT+TGG | - | chr3.4:92199972-92199991 | MS.gene42650:CDS | 10.0% |
| !! | TATGTATATTATCTTTAAAT+AGG | + | chr3.4:92200690-92200709 | None:intergenic | 10.0% |
| !!! | TATGTTTATATTAGTTTATT+TGG | + | chr3.4:92199050-92199069 | None:intergenic | 10.0% |
| !!! | TCTATTTTTTTAATGAAATA+AGG | - | chr3.4:92199003-92199022 | MS.gene42650:intron | 10.0% |
| !! | AAACAATGTTAATATGTTAA+AGG | - | chr3.4:92197547-92197566 | MS.gene42650:CDS | 15.0% |
| !! | ATAAATCATCAATTAAAGAA+AGG | + | chr3.4:92197214-92197233 | None:intergenic | 15.0% |
| !! | ATATAATTTAATCTAGCTAT+TGG | - | chr3.4:92196702-92196721 | MS.gene42650:intron | 15.0% |
| !! | TATAATTTAATCTAGCTATT+GGG | - | chr3.4:92196703-92196722 | MS.gene42650:intron | 15.0% |
| !!! | TTTAATTTCATTTTTTGCTT+AGG | + | chr3.4:92198301-92198320 | None:intergenic | 15.0% |
| !! | AAAGATAATAATTAATAGCC+AGG | + | chr3.4:92198595-92198614 | None:intergenic | 20.0% |
| !! | AACTCTTAAAGTTCAAATTT+CGG | - | chr3.4:92200165-92200184 | MS.gene42650:intron | 20.0% |
| !! | AATCCAAATAAGCTATAAAT+AGG | + | chr3.4:92198642-92198661 | None:intergenic | 20.0% |
| !! | CATAAAAAAAAAACCGTTAA+GGG | + | chr3.4:92198920-92198939 | None:intergenic | 20.0% |
| !! | CCAAAACAAAAATAACAAAA+AGG | + | chr3.4:92199857-92199876 | None:intergenic | 20.0% |
| !! | TAATTAAGCATATATTGAGT+AGG | + | chr3.4:92198833-92198852 | None:intergenic | 20.0% |
| !! | TAGTTGTTTATAGAAGAATT+TGG | + | chr3.4:92196330-92196349 | None:intergenic | 20.0% |
| !! | TGAAATAAGGAATACATTTA+CGG | - | chr3.4:92199016-92199035 | MS.gene42650:intron | 20.0% |
| !! | TGTTCTTCATGTTTAATTAA+GGG | - | chr3.4:92199645-92199664 | MS.gene42650:intron | 20.0% |
| !! | TTGTTAAACTTAGTTAGATT+CGG | - | chr3.4:92197888-92197907 | MS.gene42650:intron | 20.0% |
| !!! | AATTAAGTTGTTTATCCAAT+TGG | - | chr3.4:92198848-92198867 | MS.gene42650:intron | 20.0% |
| !!! | ATGATAAATACTTGTTTTGT+AGG | - | chr3.4:92198002-92198021 | MS.gene42650:CDS | 20.0% |
| !!! | CCTTTTTGTTATTTTTGTTT+TGG | - | chr3.4:92199854-92199873 | MS.gene42650:intron | 20.0% |
| !!! | GTTTTATTCCATAATATTGA+AGG | - | chr3.4:92198490-92198509 | MS.gene42650:intron | 20.0% |
| !!! | TAACTTTCATTTTTTTGACT+TGG | - | chr3.4:92196616-92196635 | MS.gene42650:intron | 20.0% |
| !!! | TTTAGACTTAAGTTGATTTT+CGG | + | chr3.4:92199733-92199752 | None:intergenic | 20.0% |
| ! | AAAAATTGCAAAGATAATGC+AGG | - | chr3.4:92199996-92200015 | MS.gene42650:CDS | 25.0% |
| ! | AAAGGTAGAAACATTTATCT+GGG | - | chr3.4:92197565-92197584 | MS.gene42650:CDS | 25.0% |
| ! | AATAAGTAATCCAATACTCA+CGG | - | chr3.4:92197008-92197027 | MS.gene42650:intron | 25.0% |
| ! | ATACAAGTTCTTAAGTGAAA+AGG | + | chr3.4:92201160-92201179 | None:intergenic | 25.0% |
| ! | CACTAGTAAAAAATTAGGAA+TGG | + | chr3.4:92200218-92200237 | None:intergenic | 25.0% |
| ! | CTTAAGAACTTGTATACTAT+AGG | - | chr3.4:92201165-92201184 | MS.gene42650:CDS | 25.0% |
| ! | CTTATTTCAATAAGCTCTAT+AGG | - | chr3.4:92198738-92198757 | MS.gene42650:intron | 25.0% |
| ! | GAGAAATTATTTCCTGAATA+AGG | + | chr3.4:92200746-92200765 | None:intergenic | 25.0% |
| ! | GATCAGGTGTTTATTAAATA+AGG | + | chr3.4:92198877-92198896 | None:intergenic | 25.0% |
| ! | GCATAAAAAAAAAACCGTTA+AGG | + | chr3.4:92198921-92198940 | None:intergenic | 25.0% |
| ! | GCATGACTAAAAAAGTTATA+TGG | + | chr3.4:92197382-92197401 | None:intergenic | 25.0% |
| ! | GCTTATTTGGATTTATCTTA+TGG | - | chr3.4:92198649-92198668 | MS.gene42650:intron | 25.0% |
| ! | GTGATCACTAGTAAAAAATT+AGG | + | chr3.4:92200223-92200242 | None:intergenic | 25.0% |
| ! | GTGTTCTTCATGTTTAATTA+AGG | - | chr3.4:92199644-92199663 | MS.gene42650:intron | 25.0% |
| ! | TAAAGGTAGAAACATTTATC+TGG | - | chr3.4:92197564-92197583 | MS.gene42650:CDS | 25.0% |
| ! | TAGTAAAAAATTAGGAATGG+TGG | + | chr3.4:92200215-92200234 | None:intergenic | 25.0% |
| ! | TATTAAATAAGGATGCCAAT+TGG | + | chr3.4:92198866-92198885 | None:intergenic | 25.0% |
| ! | TTGTAAATGAAAGATAAGAG+AGG | - | chr3.4:92197413-92197432 | MS.gene42650:intron | 25.0% |
| ! | TTTCACATATGTTGAAAATG+TGG | - | chr3.4:92197282-92197301 | MS.gene42650:intron | 25.0% |
| !! | AGTCAATTTTATATATCCTG+AGG | - | chr3.4:92201051-92201070 | MS.gene42650:intron | 25.0% |
| !! | ATATGGAACCTATAAAGTTT+TGG | - | chr3.4:92198040-92198059 | MS.gene42650:CDS | 25.0% |
| !! | TACTTTTCATATAAGCACTT+AGG | + | chr3.4:92198810-92198829 | None:intergenic | 25.0% |
| !! | TAGCTTATGATATCTTTTAG+CGG | - | chr3.4:92198708-92198727 | MS.gene42650:intron | 25.0% |
| !! | TAGGTTCAAAATGTTTGTTA+TGG | - | chr3.4:92196733-92196752 | MS.gene42650:CDS | 25.0% |
| !! | TATGAGATGTGATTCTAAAA+TGG | - | chr3.4:92199550-92199569 | MS.gene42650:intron | 25.0% |
| !! | TATGGAACCTATAAAGTTTT+GGG | - | chr3.4:92198041-92198060 | MS.gene42650:CDS | 25.0% |
| !!! | AGTTAGGTGTTTATTTTTGA+AGG | - | chr3.4:92196434-92196453 | MS.gene42650:intron | 25.0% |
| !!! | ATTGAGTATTGCATTTTTTG+TGG | - | chr3.4:92197912-92197931 | MS.gene42650:intron | 25.0% |
| !!! | CTTTTTTTTTTTTGTGCGTT+TGG | - | chr3.4:92198611-92198630 | MS.gene42650:intron | 25.0% |
| !!! | GTCTCTTTTGACTATAAATA+GGG | + | chr3.4:92198419-92198438 | None:intergenic | 25.0% |
| !!! | GTTGTTTTGTTTTGGTATTA+AGG | + | chr3.4:92196222-92196241 | None:intergenic | 25.0% |
| !!! | TGATGGTGTATTTTAAGATT+TGG | - | chr3.4:92197450-92197469 | MS.gene42650:intron | 25.0% |
| !!! | TGTAGAATGTTGTTTTGTTT+TGG | + | chr3.4:92196230-92196249 | None:intergenic | 25.0% |
| !!! | TGTCTCTTTTGACTATAAAT+AGG | + | chr3.4:92198420-92198439 | None:intergenic | 25.0% |
| !!! | TTTGTTATTGTCTTTGTTAC+AGG | - | chr3.4:92201260-92201279 | MS.gene42650:CDS | 25.0% |
| AAACAACCTATTGATCACAA+AGG | + | chr3.4:92201107-92201126 | None:intergenic | 30.0% | |
| AACAAACCTCAACTCTTAAA+AGG | - | chr3.4:92196192-92196211 | MS.gene42650:intron | 30.0% | |
| AACAAGGTTTATCTATCTCA+GGG | - | chr3.4:92197675-92197694 | MS.gene42650:intron | 30.0% | |
| AACATCAGTTTCTAACAGTA+GGG | - | chr3.4:92197855-92197874 | MS.gene42650:intron | 30.0% | |
| AACATTTATCTGGGTAAATG+AGG | - | chr3.4:92197574-92197593 | MS.gene42650:intron | 30.0% | |
| AAGACATACTTGTGGATATT+AGG | - | chr3.4:92197605-92197624 | MS.gene42650:intron | 30.0% | |
| AAGTTCAGAAAAATTGAGAG+AGG | + | chr3.4:92197811-92197830 | None:intergenic | 30.0% | |
| AATTCCATCAAAAACAACAC+TGG | + | chr3.4:92196525-92196544 | None:intergenic | 30.0% | |
| ACTTTAATTCACGAGAGATT+TGG | + | chr3.4:92198204-92198223 | None:intergenic | 30.0% | |
| AGGATATGACATGAACATAT+TGG | + | chr3.4:92200043-92200062 | None:intergenic | 30.0% | |
| ATACATGATATGCATGGATA+GGG | - | chr3.4:92196666-92196685 | MS.gene42650:intron | 30.0% | |
| ATCAAACATTTACCAAAAGC+AGG | + | chr3.4:92196973-92196992 | None:intergenic | 30.0% | |
| ATGAACTCCCAAAACTTTAT+AGG | + | chr3.4:92198051-92198070 | None:intergenic | 30.0% | |
| ATGGATCTGTATATTAAGCT+TGG | - | chr3.4:92197948-92197967 | MS.gene42650:intron | 30.0% | |
| ATGTAATCAAAGAGTGAATG+TGG | + | chr3.4:92198776-92198795 | None:intergenic | 30.0% | |
| ATTCCATCAAAAACAACACT+GGG | + | chr3.4:92196524-92196543 | None:intergenic | 30.0% | |
| ATTGTATGCTTGTTCAGATT+GGG | - | chr3.4:92200847-92200866 | MS.gene42650:intron | 30.0% | |
| ATTTAATCTAGCTATTGGGA+TGG | - | chr3.4:92196707-92196726 | MS.gene42650:intron | 30.0% | |
| CAACTTAAGTCTAAAAGAGA+AGG | - | chr3.4:92199738-92199757 | MS.gene42650:intron | 30.0% | |
| CACAAACAAAGAAGTTAGAT+GGG | + | chr3.4:92199821-92199840 | None:intergenic | 30.0% | |
| CTACAAAATTACTGATACTG+TGG | - | chr3.4:92199492-92199511 | MS.gene42650:intron | 30.0% | |
| CTTCTATTATACTCATCGAT+CGG | - | chr3.4:92200490-92200509 | MS.gene42650:intron | 30.0% | |
| GAAAAAAAATCCTGAGAAGT+TGG | - | chr3.4:92199456-92199475 | MS.gene42650:intron | 30.0% | |
| GAGCCTATTTATAGCTTATT+TGG | - | chr3.4:92198636-92198655 | MS.gene42650:intron | 30.0% | |
| GGAATTCATGGAATTCATAA+TGG | - | chr3.4:92196539-92196558 | MS.gene42650:intron | 30.0% | |
| GGATATGACATGAACATATT+GGG | + | chr3.4:92200042-92200061 | None:intergenic | 30.0% | |
| GGCATATTTCATTACGAATA+TGG | - | chr3.4:92198023-92198042 | MS.gene42650:CDS | 30.0% | |
| GTACATAACTCAGATAACAA+AGG | + | chr3.4:92199096-92199115 | None:intergenic | 30.0% | |
| TAAAAAATTAGGAATGGTGG+TGG | + | chr3.4:92200212-92200231 | None:intergenic | 30.0% | |
| TACAGTGTTAATTGACAATC+TGG | + | chr3.4:92200605-92200624 | None:intergenic | 30.0% | |
| TATACATGATATGCATGGAT+AGG | - | chr3.4:92196665-92196684 | MS.gene42650:intron | 30.0% | |
| TATTTGCGCCTTCAATATTA+TGG | + | chr3.4:92198501-92198520 | None:intergenic | 30.0% | |
| TCACAAACAAAGAAGTTAGA+TGG | + | chr3.4:92199822-92199841 | None:intergenic | 30.0% | |
| TCTAAACGCCATTTAAAAGT+AGG | - | chr3.4:92199905-92199924 | MS.gene42650:CDS | 30.0% | |
| TGAAAGTTAAAACGAAGTGT+TGG | + | chr3.4:92196605-92196624 | None:intergenic | 30.0% | |
| TGGATCTGTATATTAAGCTT+GGG | - | chr3.4:92197949-92197968 | MS.gene42650:intron | 30.0% | |
| TGTCTTAACTCCAATATTCA+TGG | - | chr3.4:92199355-92199374 | MS.gene42650:intron | 30.0% | |
| TGTTAATCCTACTTCTTGTA+CGG | - | chr3.4:92199620-92199639 | MS.gene42650:intron | 30.0% | |
| TGTTTCTTTCGATCTAAGTT+AGG | - | chr3.4:92196418-92196437 | MS.gene42650:intron | 30.0% | |
| ! | ACTTCTTTGTTTGTGATATC+TGG | - | chr3.4:92199826-92199845 | MS.gene42650:intron | 30.0% |
| ! | ATAAACCTTGTTGTAGACAA+AGG | + | chr3.4:92197667-92197686 | None:intergenic | 30.0% |
| ! | ATTTTTCTGAACTTTCTCTC+TGG | - | chr3.4:92197817-92197836 | MS.gene42650:intron | 30.0% |
| ! | CACAGTATCAGTAATTTTGT+AGG | + | chr3.4:92199494-92199513 | None:intergenic | 30.0% |
| ! | CTTTTGTACTGTTAACCATT+AGG | - | chr3.4:92198111-92198130 | MS.gene42650:CDS | 30.0% |
| ! | GATTGGTTATTAAGGCTAAT+GGG | - | chr3.4:92196823-92196842 | MS.gene42650:CDS | 30.0% |
| ! | TAAAATTAAGTGCCGTGATA+TGG | - | chr3.4:92197126-92197145 | MS.gene42650:intron | 30.0% |
| ! | TAAATCCAATTTTGTTCCTG+TGG | + | chr3.4:92197075-92197094 | None:intergenic | 30.0% |
| ! | TAATTGGGTGATGTTTTTCA+AGG | - | chr3.4:92200999-92201018 | MS.gene42650:intron | 30.0% |
| ! | TTCATGTCTCTAATTTTGGA+AGG | - | chr3.4:92198066-92198085 | MS.gene42650:CDS | 30.0% |
| ! | TTTTGAGCAATCAAAAGATC+TGG | + | chr3.4:92199260-92199279 | None:intergenic | 30.0% |
| !! | ATAAGTTGGATTTTGGCATT+AGG | - | chr3.4:92198520-92198539 | MS.gene42650:intron | 30.0% |
| !! | ATGTGAGTCTTATTCTTGAA+GGG | + | chr3.4:92199231-92199250 | None:intergenic | 30.0% |
| !! | CGCAAATATAAGTTGGATTT+TGG | - | chr3.4:92198513-92198532 | MS.gene42650:intron | 30.0% |
| !! | TGAATGTGCCTACTTTTAAA+TGG | + | chr3.4:92199916-92199935 | None:intergenic | 30.0% |
| !! | TTGACTTGGATTGAAACTTT+AGG | - | chr3.4:92196630-92196649 | MS.gene42650:intron | 30.0% |
| !! | TTTTGACTATAAATAGGGCA+GGG | + | chr3.4:92198414-92198433 | None:intergenic | 30.0% |
| !! | TTTTGATTGCTCAAAAGCAA+AGG | - | chr3.4:92199264-92199283 | MS.gene42650:intron | 30.0% |
| !!! | ATTTTGACTTGAAACACTTC+AGG | - | chr3.4:92198232-92198251 | MS.gene42650:intron | 30.0% |
| !!! | GGATTTTTTTTCAAAGCACA+TGG | + | chr3.4:92199448-92199467 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGATGGAATTCA+TGG | - | chr3.4:92196527-92196546 | MS.gene42650:intron | 30.0% |
| !!! | TTGTAGACAAAGGTTTTGTT+AGG | + | chr3.4:92197657-92197676 | None:intergenic | 30.0% |
| AAGTAGTCACACATGCATAT+TGG | + | chr3.4:92197168-92197187 | None:intergenic | 35.0% | |
| AAGTCTGAAAGACATACTTG+TGG | - | chr3.4:92197597-92197616 | MS.gene42650:intron | 35.0% | |
| AATCATTGTTCTTTCTTCCC+TGG | - | chr3.4:92197492-92197511 | MS.gene42650:CDS | 35.0% | |
| ACCAGATTGTCAATTAACAC+TGG | - | chr3.4:92200573-92200592 | MS.gene42650:intron | 35.0% | |
| ATCATTATGCTGGAAACAGT+AGG | + | chr3.4:92196772-92196791 | None:intergenic | 35.0% | |
| ATGAGATATGTGGAGTAGAA+AGG | + | chr3.4:92200063-92200082 | None:intergenic | 35.0% | |
| ATTGGCATGATAACAAAGAC+AGG | + | chr3.4:92199142-92199161 | None:intergenic | 35.0% | |
| CAAAACCTTTGTCTACAACA+AGG | - | chr3.4:92197659-92197678 | MS.gene42650:intron | 35.0% | |
| CAACAAGGTTTATCTATCTC+AGG | - | chr3.4:92197674-92197693 | MS.gene42650:intron | 35.0% | |
| CACATTCACATAATTGTAGC+AGG | - | chr3.4:92199928-92199947 | MS.gene42650:CDS | 35.0% | |
| CATCATTGTAGTTCTTGAGA+TGG | + | chr3.4:92200768-92200787 | None:intergenic | 35.0% | |
| CATTAAAATCCCTTGCAGAA+GGG | - | chr3.4:92200974-92200993 | MS.gene42650:intron | 35.0% | |
| CATTGCACTTTCTAATGTGA+AGG | - | chr3.4:92200804-92200823 | MS.gene42650:intron | 35.0% | |
| CATTGTATGCTTGTTCAGAT+TGG | - | chr3.4:92200846-92200865 | MS.gene42650:intron | 35.0% | |
| CGAATCATATCCACATTTGA+GGG | - | chr3.4:92199707-92199726 | MS.gene42650:intron | 35.0% | |
| CTGAGTAATGATCATTATGC+TGG | + | chr3.4:92196782-92196801 | None:intergenic | 35.0% | |
| CTGCATATACATGATATGCA+TGG | - | chr3.4:92196660-92196679 | MS.gene42650:intron | 35.0% | |
| CTTTGTAAGAGCAGTAATGA+AGG | + | chr3.4:92200470-92200489 | None:intergenic | 35.0% | |
| GAACATCAGTTTCTAACAGT+AGG | - | chr3.4:92197854-92197873 | MS.gene42650:intron | 35.0% | |
| GATAAGTGAAACCATGATGT+GGG | + | chr3.4:92200892-92200911 | None:intergenic | 35.0% | |
| GTGATATGGAAAAACTGGTT+GGG | - | chr3.4:92197140-92197159 | MS.gene42650:intron | 35.0% | |
| GTTAATCCTACTTCTTGTAC+GGG | - | chr3.4:92199621-92199640 | MS.gene42650:intron | 35.0% | |
| GTTTACCACAGGAACAAAAT+TGG | - | chr3.4:92197067-92197086 | MS.gene42650:intron | 35.0% | |
| TAAAGTTCAAATTTCGGAGC+TGG | - | chr3.4:92200171-92200190 | MS.gene42650:intron | 35.0% | |
| TAAGAGCAAGAAAGACCTAA+TGG | + | chr3.4:92198129-92198148 | None:intergenic | 35.0% | |
| TACAATGATGATCCAGCTAT+TGG | - | chr3.4:92200778-92200797 | MS.gene42650:CDS | 35.0% | |
| TACATGATATGCATGGATAG+GGG | - | chr3.4:92196667-92196686 | MS.gene42650:intron | 35.0% | |
| TAGGAATAGAAAAGTCCAGT+GGG | - | chr3.4:92197624-92197643 | MS.gene42650:intron | 35.0% | |
| TATAGTCAAAAGAGACATGC+TGG | - | chr3.4:92198423-92198442 | MS.gene42650:intron | 35.0% | |
| TATCATGCCAATTGCACATT+TGG | - | chr3.4:92199150-92199169 | MS.gene42650:intron | 35.0% | |
| TCCAAAGCTTCTGTATATCT+TGG | - | chr3.4:92199765-92199784 | MS.gene42650:intron | 35.0% | |
| TCCAAGATATACAGAAGCTT+TGG | + | chr3.4:92199769-92199788 | None:intergenic | 35.0% | |
| TCCAGTGTTAATTGACAATC+TGG | + | chr3.4:92200577-92200596 | None:intergenic | 35.0% | |
| TCGAATCATATCCACATTTG+AGG | - | chr3.4:92199706-92199725 | MS.gene42650:intron | 35.0% | |
| TCGTATCAAGATGAGATATG+TGG | + | chr3.4:92200073-92200092 | None:intergenic | 35.0% | |
| TGATAAGTGAAACCATGATG+TGG | + | chr3.4:92200893-92200912 | None:intergenic | 35.0% | |
| TGATATGGAAAAACTGGTTG+GGG | - | chr3.4:92197141-92197160 | MS.gene42650:intron | 35.0% | |
| TGTTGTGTAGTTCCTTATTC+AGG | - | chr3.4:92200731-92200750 | MS.gene42650:CDS | 35.0% | |
| TTAATCCTACTTCTTGTACG+GGG | - | chr3.4:92199622-92199641 | MS.gene42650:intron | 35.0% | |
| TTAATCTCTGCAGCATTTGA+AGG | - | chr3.4:92196276-92196295 | MS.gene42650:CDS | 35.0% | |
| TTAGAATTAGCCAACTTCTC+AGG | + | chr3.4:92199469-92199488 | None:intergenic | 35.0% | |
| TTAGGAATAGAAAAGTCCAG+TGG | - | chr3.4:92197623-92197642 | MS.gene42650:intron | 35.0% | |
| TTAGGTTACGAAACTTGATC+AGG | + | chr3.4:92198893-92198912 | None:intergenic | 35.0% | |
| TTCACTCTTGATGCAAAACA+AGG | - | chr3.4:92198176-92198195 | MS.gene42650:intron | 35.0% | |
| TTCTCTTACCAGTTCATTGT+TGG | - | chr3.4:92197238-92197257 | MS.gene42650:intron | 35.0% | |
| TTGGCATGATAACAAAGACA+GGG | + | chr3.4:92199141-92199160 | None:intergenic | 35.0% | |
| TTGTATGCTTGTTCAGATTG+GGG | - | chr3.4:92200848-92200867 | MS.gene42650:intron | 35.0% | |
| TTGTGGAGAAAAACGAAAGA+TGG | - | chr3.4:92197929-92197948 | MS.gene42650:intron | 35.0% | |
| TTTGACTATAAATAGGGCAG+GGG | + | chr3.4:92198413-92198432 | None:intergenic | 35.0% | |
| ! | AAGATATACAGAAGCTTTGG+AGG | + | chr3.4:92199766-92199785 | None:intergenic | 35.0% |
| ! | ACTGTAATTTTTCTTGCAGG+AGG | - | chr3.4:92199668-92199687 | MS.gene42650:intron | 35.0% |
| ! | ATGTTGTTCTTACCTGCTTT+TGG | - | chr3.4:92196958-92196977 | MS.gene42650:intron | 35.0% |
| ! | ATTTGGTGGAGTGGATATAT+AGG | - | chr3.4:92199167-92199186 | MS.gene42650:intron | 35.0% |
| ! | CAACCAGTTTTTCCATATCA+CGG | + | chr3.4:92197141-92197160 | None:intergenic | 35.0% |
| ! | CTGTAATTTTTCTTGCAGGA+GGG | - | chr3.4:92199669-92199688 | MS.gene42650:intron | 35.0% |
| ! | GGAGTTCATGTCTCTAATTT+TGG | - | chr3.4:92198062-92198081 | MS.gene42650:CDS | 35.0% |
| ! | TCGATCGGTTTATTCATTCA+TGG | - | chr3.4:92200505-92200524 | MS.gene42650:intron | 35.0% |
| ! | TTGAAGGCGCAAATATAAGT+TGG | - | chr3.4:92198506-92198525 | MS.gene42650:intron | 35.0% |
| ! | TTGAATCTGAAGTTTACCAC+AGG | - | chr3.4:92197056-92197075 | MS.gene42650:intron | 35.0% |
| ! | TTTTATATATCCTGAGGTCG+TGG | - | chr3.4:92201057-92201076 | MS.gene42650:intron | 35.0% |
| !! | AAACGAAGTGTTGGTAAAGT+AGG | + | chr3.4:92196596-92196615 | None:intergenic | 35.0% |
| !! | AGATATACAGAAGCTTTGGA+GGG | + | chr3.4:92199765-92199784 | None:intergenic | 35.0% |
| !! | AGGCATAAGAGAAGTTTTGA+TGG | - | chr3.4:92197433-92197452 | MS.gene42650:intron | 35.0% |
| !! | AGTTGAGGTTGTTTTCCATA+TGG | - | chr3.4:92196299-92196318 | MS.gene42650:CDS | 35.0% |
| !! | CTTTTGACTATAAATAGGGC+AGG | + | chr3.4:92198415-92198434 | None:intergenic | 35.0% |
| !! | GATGTGAGTCTTATTCTTGA+AGG | + | chr3.4:92199232-92199251 | None:intergenic | 35.0% |
| !! | GGATTGGTTATTAAGGCTAA+TGG | - | chr3.4:92196822-92196841 | MS.gene42650:CDS | 35.0% |
| !! | GTCGTTAACTTGTCTAATGA+TGG | - | chr3.4:92200629-92200648 | MS.gene42650:intron | 35.0% |
| !! | TCTCTAATTTTGGAAGGTCT+TGG | - | chr3.4:92198072-92198091 | MS.gene42650:CDS | 35.0% |
| !! | TGGATTTTGGCATTAGGATT+AGG | - | chr3.4:92198526-92198545 | MS.gene42650:intron | 35.0% |
| !! | TGTGAGTCTTATTCTTGAAG+GGG | + | chr3.4:92199230-92199249 | None:intergenic | 35.0% |
| !! | TTGAATCCATTGATAGTGCT+TGG | - | chr3.4:92201221-92201240 | MS.gene42650:CDS | 35.0% |
| !! | TTTTTCAAAGCACATGGTTC+AGG | + | chr3.4:92199442-92199461 | None:intergenic | 35.0% |
| !!! | GGGTTAAGAATTTTTTGTCC+TGG | - | chr3.4:92198574-92198593 | MS.gene42650:intron | 35.0% |
| AAGACAGGGATCTTTATGCT+TGG | + | chr3.4:92199127-92199146 | None:intergenic | 40.0% | |
| AGAAGACCTAATTGCTCAGA+GGG | + | chr3.4:92196120-92196139 | None:intergenic | 40.0% | |
| AGACAAACCAGTATTCTCGT+GGG | + | chr3.4:92198943-92198962 | None:intergenic | 40.0% | |
| AGTCTCTGTCAAATCATCTC+TGG | - | chr3.4:92198553-92198572 | MS.gene42650:intron | 40.0% | |
| ATCTGAGTTATGTACCTTGC+AGG | - | chr3.4:92199101-92199120 | MS.gene42650:intron | 40.0% | |
| ATTAAGGCTAATGGGACTAG+TGG | - | chr3.4:92196831-92196850 | MS.gene42650:CDS | 40.0% | |
| CACAGCAAAATTCCAAGATG+AGG | + | chr3.4:92200950-92200969 | None:intergenic | 40.0% | |
| CAGTTCAGAGCCATGAATAT+TGG | + | chr3.4:92199368-92199387 | None:intergenic | 40.0% | |
| CATCATTCCGTCAATGTTGA+AGG | - | chr3.4:92196357-92196376 | MS.gene42650:CDS | 40.0% | |
| CCAATTATTCCCTTCTGCAA+GGG | + | chr3.4:92200986-92201005 | None:intergenic | 40.0% | |
| CCTTGCAGAAGGGAATAATT+GGG | - | chr3.4:92200984-92201003 | MS.gene42650:intron | 40.0% | |
| CGTGATATGGAAAAACTGGT+TGG | - | chr3.4:92197139-92197158 | MS.gene42650:intron | 40.0% | |
| CTAGCTATTGGGATGGAAAT+AGG | - | chr3.4:92196714-92196733 | MS.gene42650:intron | 40.0% | |
| CTATTGATCACAAAGGAGAG+AGG | + | chr3.4:92201100-92201119 | None:intergenic | 40.0% | |
| CTCTCTCCTTTGTGATCAAT+AGG | - | chr3.4:92201098-92201117 | MS.gene42650:CDS | 40.0% | |
| GATGAAATTGCCGTGAGTAT+TGG | + | chr3.4:92197021-92197040 | None:intergenic | 40.0% | |
| GCATTAAAATCCCTTGCAGA+AGG | - | chr3.4:92200973-92200992 | MS.gene42650:intron | 40.0% | |
| GCTTCTGTATATCTTGGAAG+TGG | - | chr3.4:92199771-92199790 | MS.gene42650:intron | 40.0% | |
| GGATGATGTTTCTTGCTCAA+AGG | - | chr3.4:92199571-92199590 | MS.gene42650:intron | 40.0% | |
| GGTAAGAACAACATCTACCT+TGG | + | chr3.4:92196952-92196971 | None:intergenic | 40.0% | |
| GTAACCTAATGCACCCTTAA+CGG | - | chr3.4:92198904-92198923 | MS.gene42650:intron | 40.0% | |
| GTATATCTTGGAAGTGGAAG+AGG | - | chr3.4:92199777-92199796 | MS.gene42650:intron | 40.0% | |
| GTCTCTGTCAAATCATCTCT+GGG | - | chr3.4:92198554-92198573 | MS.gene42650:intron | 40.0% | |
| TAGACAAACCAGTATTCTCG+TGG | + | chr3.4:92198944-92198963 | None:intergenic | 40.0% | |
| TCAATCACCCTCAGTTTGAA+CGG | - | chr3.4:92197732-92197751 | MS.gene42650:intron | 40.0% | |
| TCTCATCCAAGCACTATCAA+TGG | + | chr3.4:92201230-92201249 | None:intergenic | 40.0% | |
| TCTGAGCAATTAGGTCTTCT+CGG | - | chr3.4:92196120-92196139 | MS.gene42650:intron | 40.0% | |
| TGCTTCACCTTCAACATTGA+CGG | + | chr3.4:92196367-92196386 | None:intergenic | 40.0% | |
| TGGAAGGTCTTGGATATCAA+AGG | - | chr3.4:92198082-92198101 | MS.gene42650:CDS | 40.0% | |
| TTGAGAAAATGCCCACATCA+TGG | - | chr3.4:92200878-92200897 | MS.gene42650:intron | 40.0% | |
| TTTGCAGCATCAACCAATGA+AGG | + | chr3.4:92196918-92196937 | None:intergenic | 40.0% | |
| ! | AAAACCGTTAAGGGTGCATT+AGG | + | chr3.4:92198911-92198930 | None:intergenic | 40.0% |
| ! | AAGAATTTGGAGCAGCCATA+TGG | + | chr3.4:92196317-92196336 | None:intergenic | 40.0% |
| ! | AGAACCTGTAGAGGTATGAT+GGG | + | chr3.4:92199307-92199326 | None:intergenic | 40.0% |
| ! | CAGTGTGCTTACATTTTTGC+AGG | + | chr3.4:92200538-92200557 | None:intergenic | 40.0% |
| ! | GGGACTGTAATTTTTCTTGC+AGG | - | chr3.4:92199665-92199684 | MS.gene42650:intron | 40.0% |
| ! | TAAACTGTTGGTGCCTTCAT+TGG | - | chr3.4:92196902-92196921 | MS.gene42650:intron | 40.0% |
| ! | TACCAGTTCATTGTTGGTGA+TGG | - | chr3.4:92197244-92197263 | MS.gene42650:intron | 40.0% |
| ! | TGGTGTGCACACTTTTAACA+AGG | - | chr3.4:92197512-92197531 | MS.gene42650:CDS | 40.0% |
| ! | TGTTAAAAGTGTGCACACCA+GGG | + | chr3.4:92197512-92197531 | None:intergenic | 40.0% |
| ! | TTCATTGGTTGATGCTGCAA+AGG | - | chr3.4:92196917-92196936 | MS.gene42650:intron | 40.0% |
| ! | TTGTTAAAAGTGTGCACACC+AGG | + | chr3.4:92197513-92197532 | None:intergenic | 40.0% |
| ! | TTTTATGCCCACGAGAATAC+TGG | - | chr3.4:92198933-92198952 | MS.gene42650:intron | 40.0% |
| !! | GGTTGACCTTTTAAGAGTTG+AGG | + | chr3.4:92196201-92196220 | None:intergenic | 40.0% |
| !! | TCCTGCAGCTTTTTCTGAAA+CGG | + | chr3.4:92197353-92197372 | None:intergenic | 40.0% |
| !! | TTCAATGGTGGATCCCAAAT+CGG | + | chr3.4:92196091-92196110 | None:intergenic | 40.0% |
| !!! | TCTCCCAGTGTTGTTTTTGA+TGG | - | chr3.4:92196518-92196537 | MS.gene42650:intron | 40.0% |
| AAACGTCACAGAACCTGTAG+AGG | + | chr3.4:92199316-92199335 | None:intergenic | 45.0% | |
| AAGTTTGAATCCACGACCTC+AGG | + | chr3.4:92201070-92201089 | None:intergenic | 45.0% | |
| AATAACCAATCCCTCACCCT+CGG | + | chr3.4:92196814-92196833 | None:intergenic | 45.0% | |
| AATCACCCTCAGTTTGAACG+GGG | - | chr3.4:92197734-92197753 | MS.gene42650:intron | 45.0% | |
| ACCGTTTCAGAAAAAGCTGC+AGG | - | chr3.4:92197349-92197368 | MS.gene42650:intron | 45.0% | |
| AGCTCGATCAGCACATATGT+GGG | + | chr3.4:92197314-92197333 | None:intergenic | 45.0% | |
| AGTGCAATGTGTCCAATAGC+TGG | + | chr3.4:92200793-92200812 | None:intergenic | 45.0% | |
| ATACAACTCCCAGCATTAGC+AGG | + | chr3.4:92200299-92200318 | None:intergenic | 45.0% | |
| ATCGTTGCCTTATCCACCTT+CGG | - | chr3.4:92196568-92196587 | MS.gene42650:intron | 45.0% | |
| ATCTTTATGCTTGGCCTGCA+AGG | + | chr3.4:92199118-92199137 | None:intergenic | 45.0% | |
| CAATCACCCTCAGTTTGAAC+GGG | - | chr3.4:92197733-92197752 | MS.gene42650:intron | 45.0% | |
| CACTCCACCAAATGTGCAAT+TGG | + | chr3.4:92199160-92199179 | None:intergenic | 45.0% | |
| CAGGTCCAAAAATGCTGCTA+GGG | + | chr3.4:92196878-92196897 | None:intergenic | 45.0% | |
| CAGTGTAACCTGCTAATGCT+GGG | - | chr3.4:92200288-92200307 | MS.gene42650:intron | 45.0% | |
| CATGCCAATTGCACATTTGG+TGG | - | chr3.4:92199153-92199172 | MS.gene42650:intron | 45.0% | |
| CATTGACGGAATGATGAAGC+TGG | + | chr3.4:92196353-92196372 | None:intergenic | 45.0% | |
| CCCAATTATTCCCTTCTGCA+AGG | + | chr3.4:92200987-92201006 | None:intergenic | 45.0% | |
| CCCTTGCAGAAGGGAATAAT+TGG | - | chr3.4:92200983-92201002 | MS.gene42650:intron | 45.0% | |
| CTATCTCAGGGACAAACTCA+GGG | - | chr3.4:92197687-92197706 | MS.gene42650:intron | 45.0% | |
| CTTGAACCCTCTGAGCAATT+AGG | - | chr3.4:92196111-92196130 | MS.gene42650:intron | 45.0% | |
| CTTTCTCAGTTGCCTCATCT+TGG | - | chr3.4:92200935-92200954 | MS.gene42650:CDS | 45.0% | |
| GAGAAGACCTAATTGCTCAG+AGG | + | chr3.4:92196121-92196140 | None:intergenic | 45.0% | |
| GAGTGGATATATAGGCTGCT+TGG | - | chr3.4:92199175-92199194 | MS.gene42650:CDS | 45.0% | |
| GCAGGAAGTTGCAGTAGTTT+AGG | - | chr3.4:92200014-92200033 | MS.gene42650:intron | 45.0% | |
| GGACACAGTAGGTGTTCAAT+CGG | + | chr3.4:92196062-92196081 | None:intergenic | 45.0% | |
| GTGCCGTGATATGGAAAAAC+TGG | - | chr3.4:92197135-92197154 | MS.gene42650:intron | 45.0% | |
| TACTCAGCAACTAAAGCCGA+GGG | - | chr3.4:92196795-92196814 | MS.gene42650:CDS | 45.0% | |
| TCAGTGTAACCTGCTAATGC+TGG | - | chr3.4:92200287-92200306 | MS.gene42650:intron | 45.0% | |
| TCGCTTTCTCTCATGTTGTG+TGG | - | chr3.4:92201193-92201212 | MS.gene42650:CDS | 45.0% | |
| TCTATCTCAGGGACAAACTC+AGG | - | chr3.4:92197686-92197705 | MS.gene42650:intron | 45.0% | |
| TCTTAAGTGAAAAGGCTCCC+AGG | + | chr3.4:92201152-92201171 | None:intergenic | 45.0% | |
| TGCAGCATTTGAAGGAGTTG+AGG | - | chr3.4:92196284-92196303 | MS.gene42650:CDS | 45.0% | |
| TGCCATCACCAACAATGAAC+TGG | + | chr3.4:92197249-92197268 | None:intergenic | 45.0% | |
| TGGACCTGGTGATAAACTGT+TGG | - | chr3.4:92196890-92196909 | MS.gene42650:intron | 45.0% | |
| TTACTCAGCAACTAAAGCCG+AGG | - | chr3.4:92196794-92196813 | MS.gene42650:CDS | 45.0% | |
| TTCAGAAAAAGCTGCAGGAG+AGG | - | chr3.4:92197354-92197373 | MS.gene42650:intron | 45.0% | |
| ! | AGAGGGTTCAAGTTCAATGG+TGG | + | chr3.4:92196103-92196122 | None:intergenic | 45.0% |
| ! | ATACGCCCTAGCAGCATTTT+TGG | - | chr3.4:92196870-92196889 | MS.gene42650:CDS | 45.0% |
| ! | CAATTGCACATTTGGTGGAG+TGG | - | chr3.4:92199158-92199177 | MS.gene42650:intron | 45.0% |
| ! | CAGAACCTGTAGAGGTATGA+TGG | + | chr3.4:92199308-92199327 | None:intergenic | 45.0% |
| ! | CTCAGAGGGTTCAAGTTCAA+TGG | + | chr3.4:92196106-92196125 | None:intergenic | 45.0% |
| ! | GAGGCACCTTCATTCCATAT+GGG | + | chr3.4:92199201-92199220 | None:intergenic | 45.0% |
| ! | TGAGGCACCTTCATTCCATA+TGG | + | chr3.4:92199202-92199221 | None:intergenic | 45.0% |
| ! | TGATTTTCGGCCCTCAAATG+TGG | + | chr3.4:92199720-92199739 | None:intergenic | 45.0% |
| !! | AGGTTTGTTGCGAAGATCGA+CGG | + | chr3.4:92196181-92196200 | None:intergenic | 45.0% |
| !! | GGGTGAGGGATTGGTTATTA+AGG | - | chr3.4:92196815-92196834 | MS.gene42650:CDS | 45.0% |
| !! | GTATGATGGGTGCATAGTCA+AGG | + | chr3.4:92199294-92199313 | None:intergenic | 45.0% |
| !! | GTTGGTAAAGTAGGTACCGA+AGG | + | chr3.4:92196587-92196606 | None:intergenic | 45.0% |
| !! | TTTTCTTGCAGGAGGGCATA+CGG | - | chr3.4:92199676-92199695 | MS.gene42650:intron | 45.0% |
| AATAGCCCCCGTTCAAACTG+AGG | + | chr3.4:92197743-92197762 | None:intergenic | 50.0% | |
| ACGTGTCAGCAACTGCAATG+TGG | + | chr3.4:92200363-92200382 | None:intergenic | 50.0% | |
| ATAGCCCCCGTTCAAACTGA+GGG | + | chr3.4:92197742-92197761 | None:intergenic | 50.0% | |
| ATCACCCTCAGTTTGAACGG+GGG | - | chr3.4:92197735-92197754 | MS.gene42650:intron | 50.0% | |
| ATTCTTGAAGGGGTCAGCTG+AGG | + | chr3.4:92199220-92199239 | None:intergenic | 50.0% | |
| CAGTTGCTGACACGTTGCTT+TGG | - | chr3.4:92200368-92200387 | MS.gene42650:CDS | 50.0% | |
| CCAGGTCCAAAAATGCTGCT+AGG | + | chr3.4:92196879-92196898 | None:intergenic | 50.0% | |
| CTCGGTCAAGCTTTACACTC+CGG | - | chr3.4:92196138-92196157 | MS.gene42650:intron | 50.0% | |
| CTGCTCGTTCTTAGCTTCCT+GGG | - | chr3.4:92201132-92201151 | MS.gene42650:CDS | 50.0% | |
| GAACACCCCGTACAAGAAGT+AGG | + | chr3.4:92199630-92199649 | None:intergenic | 50.0% | |
| GAGCTCGATCAGCACATATG+TGG | + | chr3.4:92197315-92197334 | None:intergenic | 50.0% | |
| GCTGGCATGTGACTATACTG+AGG | - | chr3.4:92198441-92198460 | MS.gene42650:intron | 50.0% | |
| GCTTGGCCCATATGGAATGA+AGG | - | chr3.4:92199192-92199211 | MS.gene42650:CDS | 50.0% | |
| GGAGACATATTGAGCACGAC+CGG | + | chr3.4:92196160-92196179 | None:intergenic | 50.0% | |
| GGCACCAACAGTTTATCACC+AGG | + | chr3.4:92196897-92196916 | None:intergenic | 50.0% | |
| TAGGGCGTATGCAACATGTC+AGG | + | chr3.4:92196860-92196879 | None:intergenic | 50.0% | |
| TATAGGCTGCTTGGCCCATA+TGG | - | chr3.4:92199184-92199203 | MS.gene42650:CDS | 50.0% | |
| TCTGCTCGTTCTTAGCTTCC+TGG | - | chr3.4:92201131-92201150 | MS.gene42650:CDS | 50.0% | |
| TGCAAAGGCAGGGAAATCCA+AGG | - | chr3.4:92196932-92196951 | MS.gene42650:intron | 50.0% | |
| TGCACCCATCATACCTCTAC+AGG | - | chr3.4:92199300-92199319 | MS.gene42650:intron | 50.0% | |
| TTGTTAGGATGTCAGCCCAC+TGG | + | chr3.4:92197642-92197661 | None:intergenic | 50.0% | |
| ! | GATCGAGCTCTAGCTTCAGA+GGG | - | chr3.4:92197325-92197344 | MS.gene42650:intron | 50.0% |
| ! | GTGTCTGACAAGCTTGCTCT+TGG | - | chr3.4:92197709-92197728 | MS.gene42650:intron | 50.0% |
| ! | TGATCGAGCTCTAGCTTCAG+AGG | - | chr3.4:92197324-92197343 | MS.gene42650:intron | 50.0% |
| ! | TGATGGGTGCATAGTCAAGG+CGG | + | chr3.4:92199291-92199310 | None:intergenic | 50.0% |
| ! | TGCTGACACGTTGCTTTGGA+AGG | - | chr3.4:92200372-92200391 | MS.gene42650:CDS | 50.0% |
| ! | TGGTTGATGCTGCAAAGGCA+GGG | - | chr3.4:92196922-92196941 | MS.gene42650:intron | 50.0% |
| ! | TTGGTTGATGCTGCAAAGGC+AGG | - | chr3.4:92196921-92196940 | MS.gene42650:intron | 50.0% |
| !! | CCTAGCAGCATTTTTGGACC+TGG | - | chr3.4:92196876-92196895 | MS.gene42650:CDS | 50.0% |
| !! | GGTAAAGTAGGTACCGAAGG+TGG | + | chr3.4:92196584-92196603 | None:intergenic | 50.0% |
| !! | GTAGGTACCGAAGGTGGATA+AGG | + | chr3.4:92196578-92196597 | None:intergenic | 50.0% |
| AGCAACTAAAGCCGAGGGTG+AGG | - | chr3.4:92196800-92196819 | MS.gene42650:CDS | 55.0% | |
| GAAAGGTGGTGTGTGGTCAC+CGG | - | chr3.4:92195994-92196013 | MS.gene42650:intron | 55.0% | |
| GCAACTAAAGCCGAGGGTGA+GGG | - | chr3.4:92196801-92196820 | MS.gene42650:CDS | 55.0% | |
| TAAAGCCGAGGGTGAGGGAT+TGG | - | chr3.4:92196806-92196825 | MS.gene42650:CDS | 55.0% | |
| TGGATCCCAAATCGGCGATG+CGG | + | chr3.4:92196083-92196102 | None:intergenic | 55.0% | |
| !! | TGTGTCCGCATCGCCGATTT+GGG | - | chr3.4:92196075-92196094 | MS.gene42650:intron | 55.0% |
| AGCAGCAAAGCCTCGTCCTC+CGG | + | chr3.4:92196016-92196035 | None:intergenic | 60.0% | |
| ATCGGCGATGCGGACACAGT+AGG | + | chr3.4:92196073-92196092 | None:intergenic | 60.0% | |
| ! | CTGTGTCCGCATCGCCGATT+TGG | - | chr3.4:92196074-92196093 | MS.gene42650:intron | 60.0% |
| ! | TCTTGCAGGAGGGCATACGG+AGG | - | chr3.4:92199679-92199698 | MS.gene42650:intron | 60.0% |
| AGGTGGTGTGTGGTCACCGG+AGG | - | chr3.4:92195997-92196016 | MS.gene42650:intron | 65.0% | |
| GGCGGAGGAAAGGTGGTGTG+TGG | - | chr3.4:92195987-92196006 | MS.gene42650:intron | 65.0% | |
| TGTGTGGTCACCGGAGGACG+AGG | - | chr3.4:92196003-92196022 | MS.gene42650:intron | 65.0% | |
| TGGCGGCGGCGGAGGAAAGG+TGG | - | chr3.4:92195980-92195999 | MS.gene42650:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 92195979 | 92201293 | 92195979 | ID=MS.gene42650 |
| chr3.4 | mRNA | 92195979 | 92201293 | 92195979 | ID=MS.gene42650.t1;Parent=MS.gene42650 |
| chr3.4 | exon | 92201059 | 92201293 | 92201059 | ID=MS.gene42650.t1.exon1;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92201059 | 92201293 | 92201059 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92200894 | 92200983 | 92200894 | ID=MS.gene42650.t1.exon2;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92200894 | 92200983 | 92200894 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92200683 | 92200816 | 92200683 | ID=MS.gene42650.t1.exon3;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92200683 | 92200816 | 92200683 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92200319 | 92200489 | 92200319 | ID=MS.gene42650.t1.exon4;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92200319 | 92200489 | 92200319 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92199897 | 92200022 | 92199897 | ID=MS.gene42650.t1.exon5;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92199897 | 92200022 | 92199897 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92199169 | 92199248 | 92199169 | ID=MS.gene42650.t1.exon6;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92199169 | 92199248 | 92199169 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92197951 | 92198149 | 92197951 | ID=MS.gene42650.t1.exon7;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92197951 | 92198149 | 92197951 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92197474 | 92197585 | 92197474 | ID=MS.gene42650.t1.exon8;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92197474 | 92197585 | 92197474 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92196727 | 92196901 | 92196727 | ID=MS.gene42650.t1.exon9;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92196727 | 92196901 | 92196727 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92196252 | 92196408 | 92196252 | ID=MS.gene42650.t1.exon10;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92196252 | 92196408 | 92196252 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| chr3.4 | exon | 92195979 | 92195990 | 92195979 | ID=MS.gene42650.t1.exon11;Parent=MS.gene42650.t1 |
| chr3.4 | CDS | 92195979 | 92195990 | 92195979 | ID=cds.MS.gene42650.t1;Parent=MS.gene42650.t1 |
| Gene Sequence |
| Protein sequence |
