Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28435.t1 | RHN43044.1 | 87.5 | 88 | 11 | 0 | 255 | 342 | 280 | 367 | 5.90E-33 | 151.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28435.t1 | G7LC73 | 87.5 | 88 | 11 | 0 | 255 | 342 | 294 | 381 | 4.3e-33 | 151.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051613 | MS.gene28435 | 0.803816 | 2.91E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28435.t1 | MTR_8g095240 | 67.797 | 354 | 99 | 3 | 4 | 342 | 72 | 425 | 5.06e-158 | 449 |
MS.gene28435.t1 | MTR_8g095240 | 33.645 | 214 | 94 | 3 | 1 | 190 | 148 | 337 | 4.32e-27 | 110 |
MS.gene28435.t1 | MTR_8g095240 | 36.986 | 146 | 68 | 2 | 101 | 246 | 8 | 129 | 6.69e-20 | 90.5 |
MS.gene28435.t1 | MTR_8g092090 | 73.256 | 258 | 52 | 3 | 1 | 257 | 5 | 246 | 2.25e-126 | 362 |
MS.gene28435.t1 | MTR_8g092090 | 31.638 | 177 | 44 | 3 | 160 | 259 | 2 | 178 | 4.63e-15 | 74.3 |
MS.gene28435.t1 | MTR_4g107460 | 66.084 | 286 | 88 | 4 | 3 | 286 | 7 | 285 | 7.17e-124 | 359 |
MS.gene28435.t1 | MTR_4g107460 | 41.935 | 155 | 89 | 1 | 1 | 155 | 98 | 251 | 6.00e-33 | 125 |
MS.gene28435.t1 | MTR_8g092410 | 55.155 | 388 | 96 | 7 | 2 | 342 | 25 | 381 | 2.20e-123 | 360 |
MS.gene28435.t1 | MTR_8g080860 | 59.843 | 254 | 101 | 1 | 4 | 257 | 15 | 267 | 1.64e-97 | 290 |
MS.gene28435.t1 | MTR_8g080860 | 50.862 | 232 | 90 | 2 | 51 | 259 | 16 | 246 | 3.36e-66 | 210 |
MS.gene28435.t1 | MTR_8g080860 | 46.012 | 163 | 64 | 2 | 1 | 163 | 127 | 265 | 1.89e-34 | 128 |
MS.gene28435.t1 | MTR_8g080860 | 59.843 | 254 | 101 | 1 | 4 | 257 | 19 | 271 | 2.26e-97 | 290 |
MS.gene28435.t1 | MTR_8g080860 | 50.862 | 232 | 90 | 2 | 51 | 259 | 20 | 250 | 4.65e-66 | 210 |
MS.gene28435.t1 | MTR_8g080860 | 46.012 | 163 | 64 | 2 | 1 | 163 | 131 | 269 | 2.23e-34 | 127 |
MS.gene28435.t1 | MTR_8g088930 | 43.440 | 343 | 159 | 9 | 4 | 331 | 12 | 334 | 2.86e-76 | 247 |
MS.gene28435.t1 | MTR_8g088930 | 41.429 | 140 | 58 | 2 | 2 | 141 | 79 | 194 | 1.19e-22 | 99.4 |
MS.gene28435.t1 | MTR_8g088930 | 33.987 | 153 | 100 | 1 | 95 | 247 | 11 | 162 | 8.54e-20 | 90.9 |
MS.gene28435.t1 | MTR_8g088930 | 43.440 | 343 | 159 | 9 | 4 | 331 | 12 | 334 | 2.88e-76 | 247 |
MS.gene28435.t1 | MTR_8g088930 | 41.429 | 140 | 58 | 2 | 2 | 141 | 79 | 194 | 1.17e-22 | 99.4 |
MS.gene28435.t1 | MTR_8g088930 | 33.987 | 153 | 100 | 1 | 95 | 247 | 11 | 162 | 8.63e-20 | 90.9 |
MS.gene28435.t1 | MTR_8g088930 | 43.440 | 343 | 159 | 9 | 4 | 331 | 12 | 334 | 1.08e-75 | 248 |
MS.gene28435.t1 | MTR_8g088930 | 42.029 | 138 | 56 | 2 | 2 | 139 | 79 | 192 | 8.55e-23 | 99.8 |
MS.gene28435.t1 | MTR_8g088930 | 33.987 | 153 | 100 | 1 | 95 | 247 | 11 | 162 | 1.05e-19 | 90.9 |
MS.gene28435.t1 | MTR_8g088930 | 43.440 | 343 | 159 | 9 | 4 | 331 | 12 | 334 | 1.10e-75 | 248 |
MS.gene28435.t1 | MTR_8g088930 | 42.029 | 138 | 56 | 2 | 2 | 139 | 79 | 192 | 8.64e-23 | 99.8 |
MS.gene28435.t1 | MTR_8g088930 | 33.987 | 153 | 100 | 1 | 95 | 247 | 11 | 162 | 1.07e-19 | 90.5 |
MS.gene28435.t1 | MTR_6g043150 | 46.693 | 257 | 136 | 1 | 3 | 259 | 8 | 263 | 2.08e-66 | 212 |
MS.gene28435.t1 | MTR_6g043150 | 40.299 | 201 | 96 | 1 | 2 | 202 | 145 | 321 | 8.35e-36 | 132 |
MS.gene28435.t1 | MTR_6g043150 | 33.796 | 216 | 118 | 3 | 96 | 287 | 9 | 223 | 1.38e-29 | 115 |
MS.gene28435.t1 | MTR_6g043150 | 37.705 | 122 | 53 | 2 | 161 | 259 | 4 | 125 | 1.45e-14 | 73.9 |
MS.gene28435.t1 | MTR_6g043150 | 80.488 | 41 | 8 | 0 | 5 | 45 | 286 | 326 | 1.99e-13 | 70.5 |
MS.gene28435.t1 | MTR_2g078470 | 41.958 | 286 | 115 | 3 | 5 | 267 | 79 | 336 | 2.26e-61 | 201 |
MS.gene28435.t1 | MTR_2g078470 | 45.660 | 265 | 139 | 2 | 3 | 267 | 8 | 267 | 1.67e-59 | 196 |
MS.gene28435.t1 | MTR_2g078470 | 41.667 | 228 | 132 | 1 | 5 | 232 | 148 | 374 | 6.01e-50 | 171 |
MS.gene28435.t1 | MTR_5g010840 | 39.643 | 280 | 137 | 3 | 2 | 258 | 109 | 379 | 2.23e-59 | 196 |
MS.gene28435.t1 | MTR_5g010840 | 34.434 | 212 | 130 | 2 | 48 | 259 | 109 | 311 | 6.30e-32 | 123 |
MS.gene28435.t1 | MTR_8g080310 | 57.051 | 156 | 66 | 1 | 90 | 245 | 3 | 157 | 1.75e-52 | 171 |
MS.gene28435.t1 | MTR_8g080310 | 57.595 | 158 | 66 | 1 | 42 | 199 | 1 | 157 | 4.72e-52 | 169 |
MS.gene28435.t1 | MTR_8g080310 | 45.395 | 152 | 82 | 1 | 1 | 152 | 6 | 156 | 1.47e-35 | 127 |
MS.gene28435.t1 | MTR_8g080310 | 38.835 | 103 | 63 | 0 | 4 | 106 | 55 | 157 | 3.22e-17 | 78.2 |
MS.gene28435.t1 | MTR_8g080310 | 39.024 | 123 | 52 | 1 | 137 | 259 | 3 | 102 | 6.18e-16 | 74.7 |
MS.gene28435.t1 | MTR_8g080310 | 29.452 | 146 | 101 | 1 | 181 | 324 | 1 | 146 | 6.01e-13 | 66.2 |
MS.gene28435.t1 | MTR_3g023310 | 62.595 | 131 | 35 | 2 | 65 | 195 | 10 | 126 | 1.47e-45 | 154 |
MS.gene28435.t1 | MTR_3g023310 | 48.462 | 130 | 53 | 2 | 20 | 149 | 11 | 126 | 5.79e-29 | 110 |
MS.gene28435.t1 | MTR_3g023310 | 37.640 | 178 | 74 | 3 | 112 | 289 | 11 | 151 | 9.58e-25 | 99.4 |
MS.gene28435.t1 | MTR_3g023310 | 33.945 | 109 | 62 | 1 | 4 | 102 | 18 | 126 | 1.79e-11 | 62.4 |
MS.gene28435.t1 | MTR_8g080340 | 50.625 | 160 | 54 | 3 | 4 | 163 | 19 | 153 | 1.14e-44 | 151 |
MS.gene28435.t1 | MTR_8g080340 | 52.857 | 140 | 65 | 1 | 118 | 257 | 17 | 155 | 5.79e-40 | 139 |
MS.gene28435.t1 | MTR_8g080340 | 44.203 | 138 | 52 | 3 | 95 | 209 | 18 | 153 | 2.58e-26 | 103 |
MS.gene28435.t1 | MTR_8g080340 | 31.034 | 116 | 57 | 1 | 1 | 116 | 61 | 153 | 1.41e-12 | 65.5 |
MS.gene28435.t1 | MTR_8g080340 | 54.000 | 50 | 23 | 0 | 1 | 50 | 107 | 156 | 2.61e-11 | 62.0 |
MS.gene28435.t1 | MTR_8g080350 | 39.286 | 224 | 89 | 4 | 1 | 182 | 122 | 340 | 3.74e-41 | 148 |
MS.gene28435.t1 | MTR_8g080350 | 48.299 | 147 | 61 | 2 | 5 | 136 | 195 | 341 | 1.32e-33 | 128 |
MS.gene28435.t1 | MTR_8g080350 | 46.541 | 159 | 57 | 4 | 124 | 258 | 86 | 240 | 1.65e-31 | 122 |
MS.gene28435.t1 | MTR_8g080350 | 31.250 | 240 | 118 | 4 | 23 | 220 | 98 | 332 | 4.64e-27 | 110 |
MS.gene28435.t1 | MTR_8g080350 | 59.551 | 89 | 34 | 1 | 171 | 259 | 86 | 172 | 9.22e-27 | 109 |
MS.gene28435.t1 | MTR_8g080350 | 25.658 | 304 | 139 | 6 | 79 | 297 | 87 | 388 | 2.41e-21 | 94.4 |
MS.gene28435.t1 | MTR_1g062740 | 32.551 | 341 | 207 | 7 | 5 | 324 | 51 | 389 | 1.32e-40 | 152 |
MS.gene28435.t1 | MTR_1g062740 | 46.667 | 90 | 48 | 0 | 4 | 93 | 142 | 231 | 3.91e-17 | 83.2 |
MS.gene28435.t1 | MTR_1g062740 | 33.613 | 119 | 79 | 0 | 141 | 259 | 48 | 166 | 8.33e-11 | 63.5 |
MS.gene28435.t1 | MTR_8g039100 | 42.857 | 189 | 105 | 3 | 6 | 193 | 54 | 240 | 9.85e-40 | 149 |
MS.gene28435.t1 | MTR_8g039100 | 36.316 | 190 | 120 | 1 | 49 | 238 | 51 | 239 | 2.23e-31 | 125 |
MS.gene28435.t1 | MTR_8g039100 | 35.135 | 185 | 115 | 2 | 98 | 282 | 54 | 233 | 1.41e-21 | 96.3 |
MS.gene28435.t1 | MTR_1g050740 | 39.894 | 188 | 112 | 1 | 5 | 192 | 61 | 247 | 2.57e-34 | 134 |
MS.gene28435.t1 | MTR_1g050740 | 29.771 | 262 | 170 | 6 | 77 | 332 | 37 | 290 | 6.19e-20 | 91.3 |
MS.gene28435.t1 | MTR_1g050740 | 44.444 | 90 | 50 | 0 | 4 | 93 | 152 | 241 | 3.08e-14 | 74.3 |
MS.gene28435.t1 | MTR_1g050740 | 32.278 | 158 | 71 | 3 | 5 | 149 | 130 | 264 | 1.02e-13 | 72.8 |
MS.gene28435.t1 | MTR_3g073100 | 42.529 | 174 | 98 | 2 | 3 | 175 | 55 | 227 | 3.11e-33 | 130 |
MS.gene28435.t1 | MTR_3g073100 | 32.105 | 190 | 121 | 4 | 78 | 266 | 40 | 222 | 3.59e-18 | 85.9 |
MS.gene28435.t1 | MTR_5g058920 | 38.342 | 193 | 111 | 2 | 35 | 220 | 174 | 365 | 4.84e-33 | 127 |
MS.gene28435.t1 | MTR_5g058920 | 37.288 | 177 | 108 | 2 | 88 | 264 | 188 | 361 | 4.44e-28 | 114 |
MS.gene28435.t1 | MTR_5g058920 | 38.506 | 174 | 106 | 1 | 3 | 176 | 195 | 367 | 1.08e-26 | 110 |
MS.gene28435.t1 | MTR_5g058920 | 35.821 | 134 | 84 | 1 | 134 | 267 | 187 | 318 | 6.59e-17 | 81.6 |
MS.gene28435.t1 | MTR_8g007500 | 36.464 | 181 | 114 | 1 | 47 | 227 | 193 | 372 | 1.46e-31 | 123 |
MS.gene28435.t1 | MTR_8g007500 | 38.690 | 168 | 100 | 2 | 95 | 262 | 195 | 359 | 2.04e-26 | 109 |
MS.gene28435.t1 | MTR_8g007500 | 37.430 | 179 | 111 | 1 | 4 | 182 | 196 | 373 | 5.10e-26 | 108 |
MS.gene28435.t1 | MTR_8g007500 | 33.333 | 111 | 74 | 0 | 1 | 111 | 262 | 372 | 7.19e-11 | 63.5 |
MS.gene28435.t1 | MTR_7g451440 | 37.714 | 175 | 108 | 1 | 53 | 227 | 194 | 367 | 2.37e-31 | 123 |
MS.gene28435.t1 | MTR_7g451440 | 35.323 | 201 | 106 | 1 | 4 | 204 | 191 | 367 | 1.43e-28 | 115 |
MS.gene28435.t1 | MTR_7g451440 | 37.569 | 181 | 108 | 3 | 84 | 262 | 177 | 354 | 1.37e-27 | 112 |
MS.gene28435.t1 | MTR_7g451440 | 34.234 | 111 | 73 | 0 | 1 | 111 | 257 | 367 | 4.38e-12 | 67.0 |
MS.gene28435.t1 | MTR_3g097260 | 43.678 | 174 | 97 | 1 | 3 | 176 | 53 | 225 | 4.03e-31 | 124 |
MS.gene28435.t1 | MTR_3g097260 | 31.120 | 241 | 128 | 3 | 51 | 277 | 55 | 271 | 1.63e-19 | 90.1 |
MS.gene28435.t1 | MTR_5g459450 | 41.212 | 165 | 96 | 1 | 5 | 169 | 69 | 232 | 1.54e-30 | 122 |
MS.gene28435.t1 | MTR_5g459450 | 31.579 | 190 | 106 | 1 | 49 | 238 | 67 | 232 | 1.15e-22 | 99.4 |
MS.gene28435.t1 | MTR_5g459450 | 31.875 | 160 | 108 | 1 | 97 | 256 | 69 | 227 | 4.42e-17 | 82.8 |
MS.gene28435.t1 | MTR_4g099180 | 34.314 | 204 | 131 | 2 | 24 | 227 | 147 | 347 | 4.11e-30 | 119 |
MS.gene28435.t1 | MTR_4g099180 | 35.955 | 178 | 111 | 2 | 85 | 262 | 160 | 334 | 1.49e-26 | 109 |
MS.gene28435.t1 | MTR_4g099180 | 33.831 | 201 | 109 | 2 | 4 | 204 | 171 | 347 | 2.37e-26 | 108 |
MS.gene28435.t1 | MTR_4g099180 | 35.345 | 116 | 75 | 0 | 130 | 245 | 158 | 273 | 1.19e-15 | 77.8 |
MS.gene28435.t1 | MTR_4g099180 | 31.343 | 134 | 92 | 0 | 5 | 138 | 218 | 351 | 8.74e-15 | 75.1 |
MS.gene28435.t1 | MTR_4g099180 | 34.234 | 111 | 73 | 0 | 1 | 111 | 237 | 347 | 9.15e-12 | 66.2 |
MS.gene28435.t1 | MTR_3g072650 | 32.990 | 194 | 124 | 2 | 38 | 226 | 172 | 364 | 4.47e-30 | 119 |
MS.gene28435.t1 | MTR_3g072650 | 36.313 | 179 | 113 | 1 | 3 | 181 | 183 | 360 | 1.38e-27 | 112 |
MS.gene28435.t1 | MTR_3g072650 | 34.444 | 180 | 115 | 2 | 85 | 264 | 173 | 349 | 9.88e-26 | 107 |
MS.gene28435.t1 | MTR_3g072650 | 33.813 | 139 | 90 | 1 | 126 | 264 | 167 | 303 | 6.43e-15 | 75.9 |
MS.gene28435.t1 | MTR_3g072650 | 32.990 | 194 | 124 | 2 | 38 | 226 | 172 | 364 | 5.14e-30 | 118 |
MS.gene28435.t1 | MTR_3g072650 | 36.313 | 179 | 113 | 1 | 3 | 181 | 183 | 360 | 1.10e-27 | 112 |
MS.gene28435.t1 | MTR_3g072650 | 34.444 | 180 | 115 | 2 | 85 | 264 | 173 | 349 | 1.27e-25 | 106 |
MS.gene28435.t1 | MTR_3g072650 | 33.813 | 139 | 90 | 1 | 126 | 264 | 167 | 303 | 1.00e-14 | 75.1 |
MS.gene28435.t1 | MTR_8g095170 | 41.304 | 184 | 102 | 4 | 5 | 184 | 30 | 211 | 2.77e-29 | 118 |
MS.gene28435.t1 | MTR_8g095170 | 34.066 | 182 | 118 | 2 | 51 | 231 | 30 | 210 | 3.73e-25 | 106 |
MS.gene28435.t1 | MTR_8g095170 | 32.402 | 179 | 119 | 2 | 93 | 270 | 26 | 203 | 3.14e-19 | 89.0 |
MS.gene28435.t1 | MTR_7g089950 | 40.116 | 172 | 102 | 1 | 5 | 176 | 71 | 241 | 2.96e-29 | 119 |
MS.gene28435.t1 | MTR_7g089950 | 35.632 | 174 | 111 | 1 | 49 | 222 | 69 | 241 | 1.16e-26 | 111 |
MS.gene28435.t1 | MTR_7g089950 | 31.788 | 151 | 102 | 1 | 97 | 247 | 71 | 220 | 1.01e-16 | 81.6 |
MS.gene28435.t1 | MTR_8g095170 | 41.304 | 184 | 102 | 4 | 5 | 184 | 30 | 211 | 5.29e-29 | 118 |
MS.gene28435.t1 | MTR_8g095170 | 34.066 | 182 | 118 | 2 | 51 | 231 | 30 | 210 | 7.56e-25 | 105 |
MS.gene28435.t1 | MTR_8g095170 | 32.402 | 179 | 119 | 2 | 93 | 270 | 26 | 203 | 9.67e-19 | 87.8 |
MS.gene28435.t1 | MTR_3g014650 | 35.602 | 191 | 101 | 3 | 26 | 195 | 87 | 276 | 2.85e-27 | 113 |
MS.gene28435.t1 | MTR_3g014650 | 30.500 | 200 | 126 | 2 | 51 | 250 | 89 | 275 | 4.22e-24 | 103 |
MS.gene28435.t1 | MTR_3g014650 | 33.951 | 162 | 73 | 2 | 5 | 132 | 89 | 250 | 2.23e-21 | 95.9 |
MS.gene28435.t1 | MTR_3g014650 | 31.383 | 188 | 112 | 3 | 95 | 282 | 87 | 257 | 1.25e-17 | 84.3 |
MS.gene28435.t1 | MTR_3g014650 | 34.513 | 113 | 74 | 0 | 5 | 117 | 146 | 258 | 1.63e-11 | 65.9 |
MS.gene28435.t1 | MTR_3g014650 | 40.000 | 90 | 54 | 0 | 4 | 93 | 168 | 257 | 2.56e-11 | 65.1 |
MS.gene28435.t1 | MTR_4g099180 | 36.719 | 128 | 80 | 1 | 85 | 212 | 160 | 286 | 3.68e-16 | 78.6 |
MS.gene28435.t1 | MTR_4g099180 | 35.345 | 116 | 75 | 0 | 130 | 245 | 158 | 273 | 1.62e-15 | 76.6 |
MS.gene28435.t1 | MTR_4g099180 | 34.483 | 145 | 92 | 2 | 22 | 166 | 145 | 286 | 2.06e-15 | 76.3 |
MS.gene28435.t1 | MTR_4g099180 | 33.858 | 127 | 61 | 1 | 4 | 130 | 171 | 274 | 4.40e-13 | 69.7 |
MS.gene28435.t1 | MTR_4g099180 | 36.719 | 128 | 80 | 1 | 85 | 212 | 160 | 286 | 3.99e-16 | 78.2 |
MS.gene28435.t1 | MTR_4g099180 | 34.483 | 145 | 92 | 2 | 22 | 166 | 145 | 286 | 1.77e-15 | 76.3 |
MS.gene28435.t1 | MTR_4g099180 | 35.345 | 116 | 75 | 0 | 130 | 245 | 158 | 273 | 2.15e-15 | 76.3 |
MS.gene28435.t1 | MTR_4g099180 | 33.858 | 127 | 61 | 1 | 4 | 130 | 171 | 274 | 2.17e-13 | 70.5 |
MS.gene28435.t1 | MTR_3g023315 | 68.000 | 50 | 16 | 0 | 2 | 51 | 5 | 54 | 3.32e-15 | 70.5 |
MS.gene28435.t1 | MTR_1g112280 | 34.167 | 120 | 79 | 0 | 10 | 129 | 618 | 737 | 5.01e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28435.t1 | AT1G60890 | 36.416 | 346 | 184 | 7 | 4 | 331 | 10 | 337 | 8.81e-58 | 199 |
MS.gene28435.t1 | AT1G60890 | 36.416 | 346 | 184 | 7 | 4 | 331 | 22 | 349 | 1.18e-57 | 199 |
MS.gene28435.t1 | AT1G10900 | 36.950 | 341 | 176 | 8 | 4 | 331 | 10 | 324 | 3.91e-52 | 184 |
MS.gene28435.t1 | AT1G10900 | 32.051 | 156 | 105 | 1 | 92 | 247 | 6 | 160 | 4.16e-16 | 80.1 |
MS.gene28435.t1 | AT1G10900 | 30.405 | 148 | 80 | 2 | 134 | 258 | 1 | 148 | 1.99e-11 | 65.5 |
MS.gene28435.t1 | AT1G10900 | 36.950 | 341 | 176 | 8 | 4 | 331 | 10 | 324 | 3.91e-52 | 184 |
MS.gene28435.t1 | AT1G10900 | 32.051 | 156 | 105 | 1 | 92 | 247 | 6 | 160 | 4.16e-16 | 80.1 |
MS.gene28435.t1 | AT1G10900 | 30.405 | 148 | 80 | 2 | 134 | 258 | 1 | 148 | 1.99e-11 | 65.5 |
MS.gene28435.t1 | AT1G10900 | 36.950 | 341 | 176 | 8 | 4 | 331 | 10 | 324 | 3.91e-52 | 184 |
MS.gene28435.t1 | AT1G10900 | 32.051 | 156 | 105 | 1 | 92 | 247 | 6 | 160 | 4.16e-16 | 80.1 |
MS.gene28435.t1 | AT1G10900 | 30.405 | 148 | 80 | 2 | 134 | 258 | 1 | 148 | 1.99e-11 | 65.5 |
MS.gene28435.t1 | AT3G09920 | 32.551 | 341 | 208 | 8 | 2 | 327 | 50 | 383 | 1.21e-37 | 143 |
MS.gene28435.t1 | AT3G09920 | 32.551 | 341 | 208 | 8 | 2 | 327 | 50 | 383 | 1.21e-37 | 143 |
MS.gene28435.t1 | AT3G09920 | 32.551 | 341 | 208 | 8 | 2 | 327 | 50 | 383 | 1.21e-37 | 143 |
MS.gene28435.t1 | AT3G09920 | 32.551 | 341 | 208 | 8 | 2 | 327 | 50 | 383 | 1.21e-37 | 143 |
MS.gene28435.t1 | AT1G21980 | 40.594 | 202 | 110 | 2 | 5 | 206 | 76 | 267 | 2.23e-37 | 142 |
MS.gene28435.t1 | AT1G21980 | 30.417 | 240 | 141 | 5 | 97 | 332 | 76 | 293 | 1.69e-22 | 99.0 |
MS.gene28435.t1 | AT1G21980 | 43.750 | 80 | 45 | 0 | 4 | 83 | 167 | 246 | 5.05e-13 | 70.5 |
MS.gene28435.t1 | AT1G21980 | 29.688 | 128 | 67 | 1 | 2 | 129 | 142 | 246 | 1.90e-11 | 65.9 |
MS.gene28435.t1 | AT1G77740 | 40.500 | 200 | 110 | 3 | 5 | 204 | 77 | 267 | 5.14e-36 | 138 |
MS.gene28435.t1 | AT1G77740 | 28.814 | 236 | 151 | 4 | 97 | 332 | 77 | 295 | 6.38e-20 | 91.3 |
MS.gene28435.t1 | AT1G77740 | 35.185 | 108 | 62 | 1 | 4 | 111 | 168 | 267 | 3.76e-12 | 67.8 |
MS.gene28435.t1 | AT1G77740 | 40.500 | 200 | 110 | 3 | 5 | 204 | 77 | 267 | 5.14e-36 | 138 |
MS.gene28435.t1 | AT1G77740 | 28.814 | 236 | 151 | 4 | 97 | 332 | 77 | 295 | 6.38e-20 | 91.3 |
MS.gene28435.t1 | AT1G77740 | 35.185 | 108 | 62 | 1 | 4 | 111 | 168 | 267 | 3.76e-12 | 67.8 |
MS.gene28435.t1 | AT3G07960 | 32.566 | 304 | 186 | 7 | 5 | 297 | 27 | 322 | 1.10e-35 | 137 |
MS.gene28435.t1 | AT3G07960 | 42.222 | 90 | 52 | 0 | 4 | 93 | 118 | 207 | 1.02e-12 | 69.3 |
MS.gene28435.t1 | AT3G07960 | 32.566 | 304 | 186 | 7 | 5 | 297 | 27 | 322 | 1.15e-35 | 137 |
MS.gene28435.t1 | AT3G07960 | 42.222 | 90 | 52 | 0 | 4 | 93 | 118 | 207 | 1.05e-12 | 69.3 |
MS.gene28435.t1 | AT3G07960 | 32.566 | 304 | 186 | 7 | 5 | 297 | 27 | 322 | 1.15e-35 | 137 |
MS.gene28435.t1 | AT3G07960 | 42.222 | 90 | 52 | 0 | 4 | 93 | 118 | 207 | 1.05e-12 | 69.3 |
MS.gene28435.t1 | AT2G41210 | 40.299 | 201 | 110 | 3 | 5 | 196 | 70 | 269 | 2.66e-35 | 136 |
MS.gene28435.t1 | AT2G41210 | 30.263 | 228 | 140 | 2 | 49 | 258 | 68 | 294 | 4.51e-28 | 115 |
MS.gene28435.t1 | AT2G41210 | 37.143 | 140 | 87 | 1 | 120 | 259 | 70 | 208 | 6.67e-17 | 82.4 |
MS.gene28435.t1 | AT3G07960 | 32.566 | 304 | 186 | 7 | 5 | 297 | 27 | 322 | 3.05e-35 | 136 |
MS.gene28435.t1 | AT3G07960 | 42.222 | 90 | 52 | 0 | 4 | 93 | 118 | 207 | 1.24e-12 | 69.3 |
MS.gene28435.t1 | AT3G56960 | 39.500 | 200 | 111 | 3 | 5 | 195 | 72 | 270 | 7.87e-34 | 132 |
MS.gene28435.t1 | AT3G56960 | 33.511 | 188 | 124 | 1 | 49 | 236 | 70 | 256 | 2.86e-28 | 116 |
MS.gene28435.t1 | AT3G56960 | 33.129 | 163 | 108 | 1 | 97 | 259 | 72 | 233 | 7.37e-20 | 91.3 |
MS.gene28435.t1 | AT3G56960 | 39.500 | 200 | 111 | 3 | 5 | 195 | 72 | 270 | 7.87e-34 | 132 |
MS.gene28435.t1 | AT3G56960 | 33.511 | 188 | 124 | 1 | 49 | 236 | 70 | 256 | 2.86e-28 | 116 |
MS.gene28435.t1 | AT3G56960 | 33.129 | 163 | 108 | 1 | 97 | 259 | 72 | 233 | 7.37e-20 | 91.3 |
MS.gene28435.t1 | AT1G21920 | 36.612 | 183 | 115 | 1 | 45 | 227 | 168 | 349 | 3.48e-31 | 121 |
MS.gene28435.t1 | AT1G21920 | 35.176 | 199 | 116 | 3 | 91 | 279 | 168 | 363 | 5.26e-28 | 112 |
MS.gene28435.t1 | AT1G21920 | 36.207 | 174 | 110 | 1 | 3 | 176 | 172 | 344 | 2.65e-25 | 105 |
MS.gene28435.t1 | AT1G21920 | 36.612 | 183 | 115 | 1 | 45 | 227 | 168 | 349 | 7.76e-31 | 121 |
MS.gene28435.t1 | AT1G21920 | 34.975 | 203 | 119 | 3 | 91 | 283 | 168 | 367 | 5.04e-28 | 113 |
MS.gene28435.t1 | AT1G21920 | 33.663 | 202 | 110 | 1 | 3 | 204 | 172 | 349 | 4.26e-25 | 105 |
MS.gene28435.t1 | AT4G17080 | 37.056 | 197 | 117 | 3 | 27 | 221 | 235 | 426 | 2.61e-30 | 120 |
MS.gene28435.t1 | AT4G17080 | 38.150 | 173 | 106 | 1 | 4 | 176 | 256 | 427 | 3.37e-27 | 112 |
MS.gene28435.t1 | AT4G17080 | 36.313 | 179 | 111 | 2 | 84 | 262 | 244 | 419 | 2.47e-25 | 106 |
MS.gene28435.t1 | AT4G17080 | 30.952 | 126 | 87 | 0 | 5 | 130 | 303 | 428 | 1.98e-15 | 77.4 |
MS.gene28435.t1 | AT4G17080 | 33.333 | 111 | 74 | 0 | 1 | 111 | 322 | 432 | 6.25e-11 | 63.9 |
MS.gene28435.t1 | AT2G35170 | 34.440 | 241 | 144 | 5 | 24 | 254 | 200 | 436 | 1.00e-29 | 119 |
MS.gene28435.t1 | AT2G35170 | 37.572 | 173 | 107 | 1 | 4 | 176 | 225 | 396 | 8.06e-26 | 107 |
MS.gene28435.t1 | AT2G35170 | 36.095 | 169 | 105 | 2 | 96 | 264 | 225 | 390 | 8.76e-23 | 99.4 |
MS.gene28435.t1 | AT2G35170 | 36.508 | 126 | 80 | 0 | 5 | 130 | 272 | 397 | 8.36e-19 | 87.4 |
MS.gene28435.t1 | AT2G35170 | 35.135 | 111 | 72 | 0 | 1 | 111 | 291 | 401 | 3.32e-12 | 67.8 |
MS.gene28435.t1 | AT1G77660 | 35.754 | 179 | 114 | 1 | 42 | 220 | 169 | 346 | 7.86e-29 | 115 |
MS.gene28435.t1 | AT1G77660 | 36.872 | 179 | 112 | 1 | 3 | 181 | 176 | 353 | 9.96e-27 | 109 |
MS.gene28435.t1 | AT1G77660 | 39.355 | 155 | 93 | 1 | 91 | 245 | 172 | 325 | 1.21e-23 | 101 |
MS.gene28435.t1 | AT2G26420 | 40.761 | 184 | 85 | 3 | 6 | 189 | 54 | 213 | 6.71e-28 | 115 |
MS.gene28435.t1 | AT2G26420 | 35.404 | 161 | 103 | 1 | 49 | 209 | 51 | 210 | 3.84e-22 | 97.8 |
MS.gene28435.t1 | AT2G26420 | 35.211 | 142 | 91 | 1 | 2 | 143 | 73 | 213 | 1.14e-19 | 90.5 |
MS.gene28435.t1 | AT2G26420 | 32.298 | 161 | 108 | 1 | 98 | 258 | 54 | 213 | 1.10e-17 | 84.7 |
MS.gene28435.t1 | AT2G26420 | 34.783 | 138 | 67 | 1 | 145 | 259 | 54 | 191 | 1.87e-16 | 80.9 |
MS.gene28435.t1 | AT2G26420 | 40.761 | 184 | 85 | 3 | 6 | 189 | 54 | 213 | 8.15e-28 | 114 |
MS.gene28435.t1 | AT2G26420 | 35.404 | 161 | 103 | 1 | 49 | 209 | 51 | 210 | 5.13e-22 | 97.4 |
MS.gene28435.t1 | AT2G26420 | 35.211 | 142 | 91 | 1 | 2 | 143 | 73 | 213 | 1.37e-19 | 90.5 |
MS.gene28435.t1 | AT2G26420 | 32.298 | 161 | 108 | 1 | 98 | 258 | 54 | 213 | 1.58e-17 | 84.3 |
MS.gene28435.t1 | AT2G26420 | 40.761 | 184 | 85 | 3 | 6 | 189 | 54 | 213 | 8.15e-28 | 114 |
MS.gene28435.t1 | AT2G26420 | 35.404 | 161 | 103 | 1 | 49 | 209 | 51 | 210 | 5.13e-22 | 97.4 |
MS.gene28435.t1 | AT2G26420 | 35.211 | 142 | 91 | 1 | 2 | 143 | 73 | 213 | 1.37e-19 | 90.5 |
MS.gene28435.t1 | AT2G26420 | 32.298 | 161 | 108 | 1 | 98 | 258 | 54 | 213 | 1.58e-17 | 84.3 |
Find 100 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGATGGGAGAGGGATTT+TGG | 0.132408 | 4.4:+8731053 | MS.gene28435:CDS |
TAAAGAAGAGATCGTGTATA+TGG | 0.254713 | 4.4:+8731625 | MS.gene28435:CDS |
TACCTCCATCCTTCCAAGTT+TGG | 0.255059 | 4.4:-8730861 | None:intergenic |
GATTCAGATAATAGCTTTGA+TGG | 0.263410 | 4.4:-8731661 | None:intergenic |
ACCTCCATCCTTCCAAGTTT+GGG | 0.269330 | 4.4:-8730860 | None:intergenic |
GGGATGTCTACACTGGAAAT+TGG | 0.295174 | 4.4:+8731016 | MS.gene28435:CDS |
TTCAAATAAAGCTGAGTCTA+AGG | 0.307919 | 4.4:+8731464 | MS.gene28435:CDS |
AATGGACTTATACATGGATT+TGG | 0.320121 | 4.4:+8731252 | MS.gene28435:CDS |
GGGATGTCTACATCGGAAAT+TGG | 0.328664 | 4.4:+8731157 | MS.gene28435:CDS |
GAGGTAGCTACACTGGAAAT+TGG | 0.329352 | 4.4:+8730878 | MS.gene28435:CDS |
CAGAGAAAGGACTGATGATA+TGG | 0.336491 | 4.4:+8731403 | MS.gene28435:CDS |
TACGAGGGTGATTGGGTTGA+TGG | 0.337164 | 4.4:+8730748 | MS.gene28435:CDS |
GCTAATGGGGATGTCGATAT+TGG | 0.363580 | 4.4:+8731288 | MS.gene28435:CDS |
GAGTTTATAGATATGCTAAT+GGG | 0.365013 | 4.4:+8731274 | MS.gene28435:CDS |
AATGGACTTGTACATGGATA+TGG | 0.366109 | 4.4:+8730973 | MS.gene28435:CDS |
GGAGTTTATAGATATGCTAA+TGG | 0.368674 | 4.4:+8731273 | MS.gene28435:CDS |
AATGGACTTAGACATGGATT+TGG | 0.376853 | 4.4:+8731114 | MS.gene28435:CDS |
GAGTTTATAGATTTGCAAAT+GGG | 0.384860 | 4.4:+8731136 | MS.gene28435:CDS |
GAACAATATACGAGGGTGAT+TGG | 0.386941 | 4.4:+8731364 | MS.gene28435:CDS |
GGAAAATACACATGCTCAAA+TGG | 0.389236 | 4.4:+8731342 | MS.gene28435:CDS |
GGTCAATATACGAGGGTGAT+TGG | 0.394446 | 4.4:+8730740 | MS.gene28435:CDS |
TTTGATGGTTGTTGGTCAAA+TGG | 0.406882 | 4.4:+8730955 | MS.gene28435:CDS |
AAAGACAACATGGATGGAAC+AGG | 0.409911 | 4.4:+8731183 | MS.gene28435:CDS |
TTTGATGGTTGTTTGTCAAA+TGG | 0.417735 | 4.4:+8731096 | MS.gene28435:CDS |
TTCGATGGTTGTTGGTCAAA+TGG | 0.420416 | 4.4:+8731234 | MS.gene28435:CDS |
GGGACTGCGACTTGGGCTAA+TGG | 0.422911 | 4.4:+8730925 | MS.gene28435:CDS |
GGAGTTTATAGATTTGCAAA+TGG | 0.437498 | 4.4:+8731135 | MS.gene28435:CDS |
AGATGTTCTACTATTCAAAC+GGG | 0.442897 | 4.4:+8730650 | None:intergenic |
CGGAAAAGGGACTGCGACTT+GGG | 0.448804 | 4.4:+8730918 | MS.gene28435:CDS |
GTCAATATACGAGGGTGATT+GGG | 0.450141 | 4.4:+8730741 | MS.gene28435:CDS |
AACAATATACGAGGGTGATT+GGG | 0.451603 | 4.4:+8731365 | MS.gene28435:CDS |
ATGGCAATGGCACCCAAACT+TGG | 0.453922 | 4.4:+8730848 | MS.gene28435:CDS |
AGGTAGCTACACTGGAAATT+GGG | 0.461160 | 4.4:+8730879 | MS.gene28435:CDS |
ATGTCGATATTGGTAACTTC+AGG | 0.462222 | 4.4:+8731298 | MS.gene28435:CDS |
GAGATGTTCTACTATTCAAA+CGG | 0.464322 | 4.4:+8730649 | None:intergenic |
GGCATCTGGTGCGAGCCCTC+TGG | 0.464728 | 4.4:+8731485 | MS.gene28435:CDS |
GGAGTTTATAGATCTGCAAA+TGG | 0.464834 | 4.4:+8730994 | MS.gene28435:CDS |
TGGAACAGGGATTATGAGTT+GGG | 0.472804 | 4.4:+8731197 | MS.gene28435:CDS |
ATTTGAAATCTGCAATGAAG+TGG | 0.473202 | 4.4:-8731448 | None:intergenic |
AAAGCTGAGTCTAAGGCATC+TGG | 0.474119 | 4.4:+8731471 | MS.gene28435:CDS |
TGGTCAAATGGACTTATACA+TGG | 0.474958 | 4.4:+8731246 | MS.gene28435:CDS |
GAGTTTATAGATCTGCAAAT+GGG | 0.475929 | 4.4:+8730995 | MS.gene28435:CDS |
AAAATAGACAGAATGGATGA+TGG | 0.482430 | 4.4:+8731039 | MS.gene28435:CDS |
GACAGAATGGATGATGGGAG+AGG | 0.485525 | 4.4:+8731045 | MS.gene28435:CDS |
TGTCTATGTTGGTAACTTCA+AGG | 0.486468 | 4.4:+8730675 | MS.gene28435:CDS |
ACGGAAAAGGGACTGCGACT+TGG | 0.489434 | 4.4:+8730917 | MS.gene28435:CDS |
TGCAATGAAGTGGAACCATC+AGG | 0.492197 | 4.4:-8731438 | None:intergenic |
TTCTTTGAGAATTGCCGTCA+TGG | 0.499107 | 4.4:+8730829 | MS.gene28435:CDS |
GGACTGCTCATACAATCATC+AGG | 0.504986 | 4.4:+8730787 | MS.gene28435:CDS |
AAAGAAGAGATCGTGTATAT+GGG | 0.505023 | 4.4:+8731626 | MS.gene28435:CDS |
TGGTCAAATGGACTTGTACA+TGG | 0.509652 | 4.4:+8730967 | MS.gene28435:CDS |
GCGATGTCTTCGATGGTTGT+TGG | 0.515994 | 4.4:+8731226 | MS.gene28435:CDS |
TGGGTTGATGGAGAGATGAC+AGG | 0.520799 | 4.4:+8730760 | MS.gene28435:CDS |
GGGATTATGAGTTGGGCTAC+CGG | 0.525267 | 4.4:+8731204 | MS.gene28435:CDS |
ACAGAATGGATGATGGGAGA+GGG | 0.526125 | 4.4:+8731046 | MS.gene28435:CDS |
GGAAAGTACACATGGTCAGA+TGG | 0.526719 | 4.4:+8730718 | MS.gene28435:CDS |
ATGGAACAGGGATTATGAGT+TGG | 0.528516 | 4.4:+8731196 | MS.gene28435:CDS |
GAGCCCTCTGGTTCTCGAAA+GGG | 0.528761 | 4.4:+8731497 | MS.gene28435:CDS |
GAGAATTGCCGTCATGGCAA+TGG | 0.531830 | 4.4:+8730835 | MS.gene28435:CDS |
AGAGAAAGGACTGATGATAT+GGG | 0.534627 | 4.4:+8731404 | MS.gene28435:CDS |
CGAGCCCTCTGGTTCTCGAA+AGG | 0.538679 | 4.4:+8731496 | MS.gene28435:CDS |
TTTGGGTGCCATTGCCATGA+CGG | 0.541667 | 4.4:-8730843 | None:intergenic |
GGCACCCAAACTTGGAAGGA+TGG | 0.545646 | 4.4:+8730856 | MS.gene28435:CDS |
GAAAGTACACATGGTCAGAT+GGG | 0.548320 | 4.4:+8730719 | MS.gene28435:CDS |
AAATAGACAGAATGGATGAT+GGG | 0.549899 | 4.4:+8731040 | MS.gene28435:CDS |
TTGTCAAATGGACTTAGACA+TGG | 0.568143 | 4.4:+8731108 | MS.gene28435:CDS |
AGTTTATAGATTTGCAAATG+GGG | 0.568661 | 4.4:+8731137 | MS.gene28435:CDS |
GCAAATGGGGATGTCTACAC+TGG | 0.570058 | 4.4:+8731009 | MS.gene28435:CDS |
AAATTGGAAAATAGACAGAA+TGG | 0.571082 | 4.4:+8731032 | MS.gene28435:CDS |
TCAAACGGGGATGTCTATGT+TGG | 0.574532 | 4.4:+8730664 | MS.gene28435:CDS |
GCTACCGGCGATGTCTTCGA+TGG | 0.576597 | 4.4:+8731219 | MS.gene28435:CDS |
TTCAGGAGTAAACTTCTCCA+TGG | 0.576629 | 4.4:+8731315 | MS.gene28435:CDS |
AAGGATGGAGGTAGCTACAC+TGG | 0.576669 | 4.4:+8730871 | MS.gene28435:CDS |
GATGGAGAGATGACAGGGAA+AGG | 0.581963 | 4.4:+8730766 | MS.gene28435:CDS |
TGGATAAAAGACAACATGGA+TGG | 0.584838 | 4.4:+8731177 | MS.gene28435:CDS |
CAATGGCACCCAAACTTGGA+AGG | 0.585341 | 4.4:+8730852 | MS.gene28435:CDS |
TTCAAGGATGAACTTCCTCA+TGG | 0.590492 | 4.4:+8730691 | MS.gene28435:CDS |
GATGAACTTCCTCATGGCAA+AGG | 0.593188 | 4.4:+8730697 | MS.gene28435:CDS |
CTCGAAAGGGAATATATGCA+AGG | 0.605315 | 4.4:+8731510 | MS.gene28435:CDS |
ACAACCATCGAAGACATCGC+CGG | 0.607359 | 4.4:-8731223 | None:intergenic |
GGGTTGATGGAGAGATGACA+GGG | 0.608966 | 4.4:+8730761 | MS.gene28435:CDS |
TGGGCCCTTCAAAATCCTGA+TGG | 0.617949 | 4.4:+8731423 | MS.gene28435:CDS |
AGTTTATAGATATGCTAATG+GGG | 0.619790 | 4.4:+8731275 | MS.gene28435:CDS |
AGTAAACTTCTCCATGGCAA+CGG | 0.625570 | 4.4:+8731321 | MS.gene28435:CDS |
CTCAAATGGAACAATATACG+AGG | 0.634118 | 4.4:+8731356 | MS.gene28435:CDS |
GTCAGATGGGTCAATATACG+AGG | 0.635853 | 4.4:+8730732 | MS.gene28435:CDS |
AGTTTATAGATCTGCAAATG+GGG | 0.639593 | 4.4:+8730996 | MS.gene28435:CDS |
TATTCCCTTTCGAGAACCAG+AGG | 0.644748 | 4.4:-8731501 | None:intergenic |
ATTCCCTTTCGAGAACCAGA+GGG | 0.651020 | 4.4:-8731500 | None:intergenic |
GTGTACTTTCCTTTGCCATG+AGG | 0.651733 | 4.4:-8730706 | None:intergenic |
GCAAATGGGGATGTCTACAT+CGG | 0.652522 | 4.4:+8731150 | MS.gene28435:CDS |
AAATTGGATAAAAGACAACA+TGG | 0.660956 | 4.4:+8731173 | MS.gene28435:CDS |
AAGACAACATGGATGGAACA+GGG | 0.663275 | 4.4:+8731184 | MS.gene28435:CDS |
ACCCAAACTTGGAAGGATGG+AGG | 0.668025 | 4.4:+8730859 | MS.gene28435:CDS |
ATGGCAAAGGAAAGTACACA+TGG | 0.689912 | 4.4:+8730710 | MS.gene28435:CDS |
TCAAATGGAACAATATACGA+GGG | 0.706226 | 4.4:+8731357 | MS.gene28435:CDS |
TCAGATGGGTCAATATACGA+GGG | 0.726341 | 4.4:+8730733 | MS.gene28435:CDS |
ATCATCAGGAGAAATGTACG+AGG | 0.734911 | 4.4:+8730801 | MS.gene28435:CDS |
TCATCAGGAGAAATGTACGA+GGG | 0.736398 | 4.4:+8730802 | MS.gene28435:CDS |
GATGTTCTACTATTCAAACG+GGG | 0.785195 | 4.4:+8730651 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAACAAGAACAAAAAAC+AGG | + | chr4.4:8731581-8731600 | MS.gene28435:CDS | 20.0% |
! | AAAGATAAAAAAGACGGAAA+AGG | + | chr4.4:8730904-8730923 | MS.gene28435:CDS | 25.0% |
! | AAATTGGAAAATAGACAGAA+TGG | + | chr4.4:8731032-8731051 | MS.gene28435:CDS | 25.0% |
! | AAATTGGATAAAAGACAACA+TGG | + | chr4.4:8731173-8731192 | MS.gene28435:CDS | 25.0% |
! | AAGATAAAAAAGACGGAAAA+GGG | + | chr4.4:8730905-8730924 | MS.gene28435:CDS | 25.0% |
! | AGTTTATAGATATGCTAATG+GGG | + | chr4.4:8731275-8731294 | MS.gene28435:CDS | 25.0% |
! | AGTTTATAGATTTGCAAATG+GGG | + | chr4.4:8731137-8731156 | MS.gene28435:CDS | 25.0% |
! | GAGTTTATAGATATGCTAAT+GGG | + | chr4.4:8731274-8731293 | MS.gene28435:CDS | 25.0% |
! | GAGTTTATAGATTTGCAAAT+GGG | + | chr4.4:8731136-8731155 | MS.gene28435:CDS | 25.0% |
! | TGGGAAAAAGATAAAAAAGA+CGG | + | chr4.4:8730898-8730917 | MS.gene28435:CDS | 25.0% |
AAAATAGACAGAATGGATGA+TGG | + | chr4.4:8731039-8731058 | MS.gene28435:CDS | 30.0% | |
AAAGAAGAGATCGTGTATAT+GGG | + | chr4.4:8731626-8731645 | MS.gene28435:CDS | 30.0% | |
AAATAGACAGAATGGATGAT+GGG | + | chr4.4:8731040-8731059 | MS.gene28435:CDS | 30.0% | |
AGTTTATAGATCTGCAAATG+GGG | + | chr4.4:8730996-8731015 | MS.gene28435:CDS | 30.0% | |
GAGTTTATAGATCTGCAAAT+GGG | + | chr4.4:8730995-8731014 | MS.gene28435:CDS | 30.0% | |
GATAAAAAAGTGACAGAGAA+AGG | + | chr4.4:8731390-8731409 | MS.gene28435:CDS | 30.0% | |
GGAGTTTATAGATATGCTAA+TGG | + | chr4.4:8731273-8731292 | MS.gene28435:CDS | 30.0% | |
GGAGTTTATAGATTTGCAAA+TGG | + | chr4.4:8731135-8731154 | MS.gene28435:CDS | 30.0% | |
TAAAGAAGAGATCGTGTATA+TGG | + | chr4.4:8731625-8731644 | MS.gene28435:CDS | 30.0% | |
TCAAATGGAACAATATACGA+GGG | + | chr4.4:8731357-8731376 | MS.gene28435:CDS | 30.0% | |
TTCAAATAAAGCTGAGTCTA+AGG | + | chr4.4:8731464-8731483 | MS.gene28435:CDS | 30.0% | |
! | AATGGACTTATACATGGATT+TGG | + | chr4.4:8731252-8731271 | MS.gene28435:CDS | 30.0% |
! | ATTTGAAATCTGCAATGAAG+TGG | - | chr4.4:8731451-8731470 | None:intergenic | 30.0% |
! | TTTGATGGTTGTTTGTCAAA+TGG | + | chr4.4:8731096-8731115 | MS.gene28435:CDS | 30.0% |
AACAATATACGAGGGTGATT+GGG | + | chr4.4:8731365-8731384 | MS.gene28435:CDS | 35.0% | |
AGAGAAAGGACTGATGATAT+GGG | + | chr4.4:8731404-8731423 | MS.gene28435:CDS | 35.0% | |
CTCAAATGGAACAATATACG+AGG | + | chr4.4:8731356-8731375 | MS.gene28435:CDS | 35.0% | |
GGAAAATACACATGCTCAAA+TGG | + | chr4.4:8731342-8731361 | MS.gene28435:CDS | 35.0% | |
GGAGTTTATAGATCTGCAAA+TGG | + | chr4.4:8730994-8731013 | MS.gene28435:CDS | 35.0% | |
TGGATAAAAGACAACATGGA+TGG | + | chr4.4:8731177-8731196 | MS.gene28435:CDS | 35.0% | |
! | AATGGACTTAGACATGGATT+TGG | + | chr4.4:8731114-8731133 | MS.gene28435:CDS | 35.0% |
! | AATGGACTTGTACATGGATA+TGG | + | chr4.4:8730973-8730992 | MS.gene28435:CDS | 35.0% |
! | ATGTCGATATTGGTAACTTC+AGG | + | chr4.4:8731298-8731317 | MS.gene28435:CDS | 35.0% |
! | TGGTCAAATGGACTTATACA+TGG | + | chr4.4:8731246-8731265 | MS.gene28435:CDS | 35.0% |
! | TTGTCAAATGGACTTAGACA+TGG | + | chr4.4:8731108-8731127 | MS.gene28435:CDS | 35.0% |
! | TTTGATGGTTGTTGGTCAAA+TGG | + | chr4.4:8730955-8730974 | MS.gene28435:CDS | 35.0% |
!! | GCTAATGGTGATGTTTTTGA+TGG | + | chr4.4:8730940-8730959 | MS.gene28435:CDS | 35.0% |
!! | GTGATGTTTTTGATGGTTGT+TGG | + | chr4.4:8730947-8730966 | MS.gene28435:CDS | 35.0% |
!! | TGTCTATGTTGGTAACTTCA+AGG | + | chr4.4:8730675-8730694 | MS.gene28435:CDS | 35.0% |
AAAGACAACATGGATGGAAC+AGG | + | chr4.4:8731183-8731202 | MS.gene28435:CDS | 40.0% | |
AAGACAACATGGATGGAACA+GGG | + | chr4.4:8731184-8731203 | MS.gene28435:CDS | 40.0% | |
AGGTAGCTACACTGGAAATT+GGG | + | chr4.4:8730879-8730898 | MS.gene28435:CDS | 40.0% | |
AGTAAACTTCTCCATGGCAA+CGG | + | chr4.4:8731321-8731340 | MS.gene28435:CDS | 40.0% | |
ATCATCAGGAGAAATGTACG+AGG | + | chr4.4:8730801-8730820 | MS.gene28435:CDS | 40.0% | |
ATGGAACAGGGATTATGAGT+TGG | + | chr4.4:8731196-8731215 | MS.gene28435:CDS | 40.0% | |
CAGAGAAAGGACTGATGATA+TGG | + | chr4.4:8731403-8731422 | MS.gene28435:CDS | 40.0% | |
CTCGAAAGGGAATATATGCA+AGG | + | chr4.4:8731510-8731529 | MS.gene28435:CDS | 40.0% | |
GAACAATATACGAGGGTGAT+TGG | + | chr4.4:8731364-8731383 | MS.gene28435:CDS | 40.0% | |
GTCAATATACGAGGGTGATT+GGG | + | chr4.4:8730741-8730760 | MS.gene28435:CDS | 40.0% | |
TCAGATGGGTCAATATACGA+GGG | + | chr4.4:8730733-8730752 | MS.gene28435:CDS | 40.0% | |
TCATCAGGAGAAATGTACGA+GGG | + | chr4.4:8730802-8730821 | MS.gene28435:CDS | 40.0% | |
TGGAACAGGGATTATGAGTT+GGG | + | chr4.4:8731197-8731216 | MS.gene28435:CDS | 40.0% | |
TTCAAGGATGAACTTCCTCA+TGG | + | chr4.4:8730691-8730710 | MS.gene28435:CDS | 40.0% | |
TTCAGGAGTAAACTTCTCCA+TGG | + | chr4.4:8731315-8731334 | MS.gene28435:CDS | 40.0% | |
TTCGATGGTTGTTGGTCAAA+TGG | + | chr4.4:8731234-8731253 | MS.gene28435:CDS | 40.0% | |
! | ATGGCAAAGGAAAGTACACA+TGG | + | chr4.4:8730710-8730729 | MS.gene28435:CDS | 40.0% |
! | ATGTGTATTTTCCGTTGCCA+TGG | - | chr4.4:8731335-8731354 | None:intergenic | 40.0% |
! | GAAAGTACACATGGTCAGAT+GGG | + | chr4.4:8730719-8730738 | MS.gene28435:CDS | 40.0% |
! | GGAACCATCAGGATTTTGAA+GGG | - | chr4.4:8731430-8731449 | None:intergenic | 40.0% |
! | TGGAACCATCAGGATTTTGA+AGG | - | chr4.4:8731431-8731450 | None:intergenic | 40.0% |
! | TGGTCAAATGGACTTGTACA+TGG | + | chr4.4:8730967-8730986 | MS.gene28435:CDS | 40.0% |
! | TTCTTTGAGAATTGCCGTCA+TGG | + | chr4.4:8730829-8730848 | MS.gene28435:CDS | 40.0% |
!! | GCTAATGGCGATGTTTTTGA+TGG | + | chr4.4:8731081-8731100 | MS.gene28435:CDS | 40.0% |
ACCTCCATCCTTCCAAGTTT+GGG | - | chr4.4:8730863-8730882 | None:intergenic | 45.0% | |
ATTCCCTTTCGAGAACCAGA+GGG | - | chr4.4:8731503-8731522 | None:intergenic | 45.0% | |
GAGGTAGCTACACTGGAAAT+TGG | + | chr4.4:8730878-8730897 | MS.gene28435:CDS | 45.0% | |
GATGAACTTCCTCATGGCAA+AGG | + | chr4.4:8730697-8730716 | MS.gene28435:CDS | 45.0% | |
GCAAATGGGGATGTCTACAT+CGG | + | chr4.4:8731150-8731169 | MS.gene28435:CDS | 45.0% | |
GCTAATGGGGATGTCGATAT+TGG | + | chr4.4:8731288-8731307 | MS.gene28435:CDS | 45.0% | |
GGACTGCTCATACAATCATC+AGG | + | chr4.4:8730787-8730806 | MS.gene28435:CDS | 45.0% | |
GGGATGTCTACACTGGAAAT+TGG | + | chr4.4:8731016-8731035 | MS.gene28435:CDS | 45.0% | |
GGGATGTCTACATCGGAAAT+TGG | + | chr4.4:8731157-8731176 | MS.gene28435:CDS | 45.0% | |
GGTCAATATACGAGGGTGAT+TGG | + | chr4.4:8730740-8730759 | MS.gene28435:CDS | 45.0% | |
GTCAGATGGGTCAATATACG+AGG | + | chr4.4:8730732-8730751 | MS.gene28435:CDS | 45.0% | |
GTGTACTTTCCTTTGCCATG+AGG | - | chr4.4:8730709-8730728 | None:intergenic | 45.0% | |
TACCTCCATCCTTCCAAGTT+TGG | - | chr4.4:8730864-8730883 | None:intergenic | 45.0% | |
TATTCCCTTTCGAGAACCAG+AGG | - | chr4.4:8731504-8731523 | None:intergenic | 45.0% | |
TCAAACGGGGATGTCTATGT+TGG | + | chr4.4:8730664-8730683 | MS.gene28435:CDS | 45.0% | |
TGCAATGAAGTGGAACCATC+AGG | - | chr4.4:8731441-8731460 | None:intergenic | 45.0% | |
! | AAAGCTGAGTCTAAGGCATC+TGG | + | chr4.4:8731471-8731490 | MS.gene28435:CDS | 45.0% |
! | ATGGGAGAGGGATTTTGGAT+TGG | + | chr4.4:8731058-8731077 | MS.gene28435:CDS | 45.0% |
! | GGAAAGTACACATGGTCAGA+TGG | + | chr4.4:8730718-8730737 | MS.gene28435:CDS | 45.0% |
! | TGGGAGAGGGATTTTGGATT+GGG | + | chr4.4:8731059-8731078 | MS.gene28435:CDS | 45.0% |
!! | ACAGAATGGATGATGGGAGA+GGG | + | chr4.4:8731046-8731065 | MS.gene28435:CDS | 45.0% |
!! | GGGATTTTGGATTGGGCTAA+TGG | + | chr4.4:8731066-8731085 | MS.gene28435:CDS | 45.0% |
AAGGATGGAGGTAGCTACAC+TGG | + | chr4.4:8730871-8730890 | MS.gene28435:CDS | 50.0% | |
ACAACCATCGAAGACATCGC+CGG | - | chr4.4:8731226-8731245 | None:intergenic | 50.0% | |
ACCCAAACTTGGAAGGATGG+AGG | + | chr4.4:8730859-8730878 | MS.gene28435:CDS | 50.0% | |
ATGGCAATGGCACCCAAACT+TGG | + | chr4.4:8730848-8730867 | MS.gene28435:CDS | 50.0% | |
CAATGGCACCCAAACTTGGA+AGG | + | chr4.4:8730852-8730871 | MS.gene28435:CDS | 50.0% | |
GAGAATTGCCGTCATGGCAA+TGG | + | chr4.4:8730835-8730854 | MS.gene28435:CDS | 50.0% | |
GATGGAGAGATGACAGGGAA+AGG | + | chr4.4:8730766-8730785 | MS.gene28435:CDS | 50.0% | |
GCAAATGGGGATGTCTACAC+TGG | + | chr4.4:8731009-8731028 | MS.gene28435:CDS | 50.0% | |
GCGATGTCTTCGATGGTTGT+TGG | + | chr4.4:8731226-8731245 | MS.gene28435:CDS | 50.0% | |
TGGGCCCTTCAAAATCCTGA+TGG | + | chr4.4:8731423-8731442 | MS.gene28435:CDS | 50.0% | |
! | GGGATTATGAGTTGGGCTAC+CGG | + | chr4.4:8731204-8731223 | MS.gene28435:CDS | 50.0% |
!! | GACAGAATGGATGATGGGAG+AGG | + | chr4.4:8731045-8731064 | MS.gene28435:CDS | 50.0% |
!! | GGGTTGATGGAGAGATGACA+GGG | + | chr4.4:8730761-8730780 | MS.gene28435:CDS | 50.0% |
!! | TACGAGGGTGATTGGGTTGA+TGG | + | chr4.4:8730748-8730767 | MS.gene28435:CDS | 50.0% |
!! | TGGGTTGATGGAGAGATGAC+AGG | + | chr4.4:8730760-8730779 | MS.gene28435:CDS | 50.0% |
!! | TTTGGGTGCCATTGCCATGA+CGG | - | chr4.4:8730846-8730865 | None:intergenic | 50.0% |
!!! | GGATGATGGGAGAGGGATTT+TGG | + | chr4.4:8731053-8731072 | MS.gene28435:CDS | 50.0% |
ACGGAAAAGGGACTGCGACT+TGG | + | chr4.4:8730917-8730936 | MS.gene28435:CDS | 55.0% | |
CGGAAAAGGGACTGCGACTT+GGG | + | chr4.4:8730918-8730937 | MS.gene28435:CDS | 55.0% | |
GGCACCCAAACTTGGAAGGA+TGG | + | chr4.4:8730856-8730875 | MS.gene28435:CDS | 55.0% | |
!! | GAGCCCTCTGGTTCTCGAAA+GGG | + | chr4.4:8731497-8731516 | MS.gene28435:CDS | 55.0% |
GCTACCGGCGATGTCTTCGA+TGG | + | chr4.4:8731219-8731238 | MS.gene28435:CDS | 60.0% | |
! | GGGACTGCGACTTGGGCTAA+TGG | + | chr4.4:8730925-8730944 | MS.gene28435:CDS | 60.0% |
!! | CGAGCCCTCTGGTTCTCGAA+AGG | + | chr4.4:8731496-8731515 | MS.gene28435:CDS | 60.0% |
GGCATCTGGTGCGAGCCCTC+TGG | + | chr4.4:8731485-8731504 | MS.gene28435:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 8730652 | 8731680 | 8730652 | ID=MS.gene28435 |
chr4.4 | mRNA | 8730652 | 8731680 | 8730652 | ID=MS.gene28435.t1;Parent=MS.gene28435 |
chr4.4 | exon | 8730652 | 8731680 | 8730652 | ID=MS.gene28435.t1.exon1;Parent=MS.gene28435.t1 |
chr4.4 | CDS | 8730652 | 8731680 | 8730652 | ID=cds.MS.gene28435.t1;Parent=MS.gene28435.t1 |
Gene Sequence |
Protein sequence |