Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28451.t1 | XP_003630170.1 | 78.8 | 567 | 31 | 2 | 1 | 478 | 1 | 567 | 5.50E-210 | 740.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28451.t1 | Q5RC80 | 44.2 | 391 | 190 | 12 | 96 | 476 | 139 | 511 | 2.3e-71 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28451.t1 | G7LC87 | 78.8 | 567 | 31 | 2 | 1 | 478 | 1 | 567 | 3.9e-210 | 740.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28451 | MS.gene064542 | PPI |
| MS.gene28451 | MS.gene55683 | PPI |
| MS.gene049629 | MS.gene28451 | PPI |
| MS.gene28451 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene28451 | PPI |
| MS.gene05085 | MS.gene28451 | PPI |
| MS.gene28451 | MS.gene008393 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28451.t1 | MTR_8g092550 | 96.250 | 400 | 15 | 0 | 79 | 478 | 168 | 567 | 0.0 | 796 |
| MS.gene28451.t1 | MTR_8g092550 | 98.571 | 70 | 1 | 0 | 1 | 70 | 1 | 70 | 1.55e-36 | 142 |
| MS.gene28451.t1 | MTR_3g095230 | 84.264 | 394 | 53 | 4 | 92 | 477 | 194 | 586 | 0.0 | 686 |
| MS.gene28451.t1 | MTR_3g095230 | 84.073 | 383 | 52 | 4 | 92 | 466 | 194 | 575 | 0.0 | 667 |
| MS.gene28451.t1 | MTR_7g094660 | 27.225 | 191 | 118 | 8 | 107 | 287 | 634 | 813 | 4.25e-12 | 68.9 |
| MS.gene28451.t1 | MTR_1g020080 | 27.869 | 183 | 114 | 7 | 114 | 288 | 191 | 363 | 6.02e-12 | 67.8 |
| MS.gene28451.t1 | MTR_4g104470 | 25.510 | 196 | 110 | 6 | 107 | 288 | 117 | 290 | 6.96e-12 | 66.6 |
| MS.gene28451.t1 | MTR_7g106440 | 26.904 | 197 | 132 | 5 | 99 | 288 | 95 | 286 | 1.18e-11 | 66.2 |
| MS.gene28451.t1 | MTR_3g084040 | 38.462 | 78 | 47 | 1 | 215 | 292 | 37 | 113 | 3.85e-11 | 61.6 |
| MS.gene28451.t1 | MTR_1g064230 | 28.421 | 190 | 122 | 6 | 111 | 288 | 83 | 270 | 6.53e-11 | 63.5 |
| MS.gene28451.t1 | MTR_8g463890 | 24.895 | 237 | 164 | 3 | 94 | 330 | 54 | 276 | 8.09e-11 | 64.3 |
| MS.gene28451.t1 | MTR_7g096260 | 28.497 | 193 | 112 | 7 | 107 | 287 | 479 | 657 | 8.72e-11 | 64.7 |
| MS.gene28451.t1 | MTR_7g096260 | 28.497 | 193 | 112 | 7 | 107 | 287 | 493 | 671 | 8.73e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28451.t1 | AT5G09880 | 60.517 | 542 | 131 | 12 | 1 | 475 | 1 | 526 | 0.0 | 576 |
| MS.gene28451.t1 | AT2G16940 | 62.121 | 396 | 135 | 7 | 93 | 474 | 20 | 414 | 1.43e-160 | 461 |
| MS.gene28451.t1 | AT2G16940 | 62.121 | 396 | 135 | 7 | 93 | 474 | 20 | 414 | 1.43e-160 | 461 |
| MS.gene28451.t1 | AT2G16940 | 61.290 | 403 | 138 | 8 | 86 | 474 | 206 | 604 | 3.21e-158 | 462 |
| MS.gene28451.t1 | AT2G16940 | 61.697 | 389 | 135 | 6 | 99 | 474 | 168 | 555 | 2.72e-157 | 458 |
| MS.gene28451.t1 | AT2G16940 | 60.147 | 409 | 139 | 8 | 89 | 474 | 186 | 593 | 1.79e-154 | 452 |
| MS.gene28451.t1 | AT1G48920 | 29.240 | 171 | 112 | 3 | 113 | 276 | 297 | 465 | 4.81e-14 | 74.7 |
| MS.gene28451.t1 | AT3G14100 | 29.000 | 200 | 121 | 8 | 101 | 298 | 48 | 228 | 5.96e-12 | 67.8 |
| MS.gene28451.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 122 | 279 | 1.04e-11 | 67.4 |
| MS.gene28451.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 47 | 204 | 1.05e-11 | 67.8 |
| MS.gene28451.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 122 | 279 | 1.07e-11 | 67.8 |
| MS.gene28451.t1 | AT2G37220 | 41.250 | 80 | 45 | 2 | 211 | 289 | 88 | 166 | 1.93e-11 | 65.1 |
| MS.gene28451.t1 | AT1G54080 | 27.830 | 212 | 122 | 9 | 101 | 310 | 52 | 234 | 2.05e-11 | 66.2 |
| MS.gene28451.t1 | AT3G18610 | 30.968 | 155 | 95 | 5 | 113 | 262 | 324 | 471 | 4.28e-11 | 65.5 |
| MS.gene28451.t1 | AT5G61030 | 39.506 | 81 | 47 | 2 | 215 | 294 | 41 | 120 | 4.95e-11 | 64.3 |
| MS.gene28451.t1 | AT5G61030 | 39.506 | 81 | 47 | 2 | 215 | 294 | 41 | 120 | 4.95e-11 | 64.3 |
| MS.gene28451.t1 | AT3G18610 | 30.968 | 155 | 95 | 5 | 113 | 262 | 354 | 501 | 5.77e-11 | 65.1 |
| MS.gene28451.t1 | AT3G18610 | 30.968 | 155 | 95 | 5 | 113 | 262 | 384 | 531 | 7.28e-11 | 65.1 |
| MS.gene28451.t1 | AT5G54900 | 28.070 | 171 | 107 | 4 | 122 | 288 | 170 | 328 | 9.06e-11 | 63.9 |
Find 134 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCTTGAGTGGGCATTTA+AGG | 0.088261 | 4.4:-8500971 | None:intergenic |
| ACAGTTCTCTGATCCCTTTC+TGG | 0.134704 | 4.4:-8497980 | None:intergenic |
| TTTATATGAAGCCAAATTTA+AGG | 0.136565 | 4.4:+8502164 | MS.gene28451:CDS |
| TCAAGATTCGTCCTTAAATT+TGG | 0.179510 | 4.4:-8502175 | None:intergenic |
| ACTTGACTTGCAGGAGATTC+AGG | 0.222696 | 4.4:+8497924 | MS.gene28451:intron |
| AAGGCAGCTCAGAGTTTAAA+TGG | 0.226346 | 4.4:+8500049 | MS.gene28451:CDS |
| ACGGGACACTGCAAGGGTTT+TGG | 0.238665 | 4.4:+8499911 | MS.gene28451:CDS |
| TCAGAGGGTTTCACCATTAC+AGG | 0.275311 | 4.4:-8499419 | None:intergenic |
| TCAGAGTTTAAATGGGAAAT+TGG | 0.278327 | 4.4:+8500057 | MS.gene28451:CDS |
| CGTCGTCGGCGCCGTGCTTC+CGG | 0.318437 | 4.4:-8496218 | None:intergenic |
| TTGGATGAATCCTTGTCTTC+CGG | 0.347395 | 4.4:-8496150 | None:intergenic |
| CTCTCTGGCCAACTACTTCT+CGG | 0.351599 | 4.4:+8499392 | MS.gene28451:CDS |
| CTGTTTGGTTCAATTCTTCA+AGG | 0.356909 | 4.4:+8497550 | MS.gene28451:CDS |
| ATGCTAAAAGCCTGCTGAAC+AGG | 0.358990 | 4.4:-8501136 | None:intergenic |
| TTTATGTCTATATCAAAATC+TGG | 0.362952 | 4.4:-8501387 | None:intergenic |
| GCCATTAATTAGTTGCTGTT+TGG | 0.366457 | 4.4:+8497535 | MS.gene28451:intron |
| TCCCTTTCTGGGTCTGCCTC+AGG | 0.382400 | 4.4:-8497968 | None:intergenic |
| CAGTTCTCTGATCCCTTTCT+GGG | 0.389571 | 4.4:-8497979 | None:intergenic |
| AATGGGAAATTGGAGATTGC+TGG | 0.395405 | 4.4:+8500067 | MS.gene28451:CDS |
| ATTCCTACTGGTTCTGCCAC+AGG | 0.409863 | 4.4:-8501220 | None:intergenic |
| CCAATGGCAATTGCGCTCTC+TGG | 0.422721 | 4.4:+8499377 | MS.gene28451:CDS |
| GATTGCTGGCAGGACTATAA+AGG | 0.425387 | 4.4:+8500081 | MS.gene28451:CDS |
| TTTCTGTCCACTGCTCCATA+TGG | 0.427406 | 4.4:-8499497 | None:intergenic |
| TCCTACTGCAGCAGCTCCAC+TGG | 0.442028 | 4.4:-8499474 | None:intergenic |
| AGCGTTGCTTATGCAAAGAT+TGG | 0.444504 | 4.4:+8500990 | MS.gene28451:CDS |
| GTTGATCACAGCTATCTTCA+TGG | 0.448889 | 4.4:+8501684 | MS.gene28451:CDS |
| TACAGATCATGTTGGAAGTC+AGG | 0.450670 | 4.4:+8500207 | MS.gene28451:CDS |
| CCAGAGAGCGCAATTGCCAT+TGG | 0.454319 | 4.4:-8499377 | None:intergenic |
| CTTCGACGAATACGAGTACT+TGG | 0.454962 | 4.4:+8496107 | MS.gene28451:CDS |
| GAAGACGGTGGAGGAGCAAC+CGG | 0.456880 | 4.4:+8496131 | MS.gene28451:CDS |
| CTTGACTTGCAGGAGATTCA+GGG | 0.457008 | 4.4:+8497925 | MS.gene28451:intron |
| ATCTCGACGGCGGCGAAGAT+AGG | 0.458271 | 4.4:+8496241 | MS.gene28451:CDS |
| TTAAATCCGAGAGGACTTAC+CGG | 0.460777 | 4.4:+8496199 | MS.gene28451:CDS |
| CTTCAATAATAAACACTCGC+TGG | 0.462607 | 4.4:-8501245 | None:intergenic |
| GCTGCTGCAGTAGGACCATA+TGG | 0.466925 | 4.4:+8499482 | MS.gene28451:CDS |
| ACTTCTCGGGCAACCTGTAA+TGG | 0.467311 | 4.4:+8499406 | MS.gene28451:CDS |
| ATTGGTGTGCCAACTGTGAA+TGG | 0.468260 | 4.4:+8501106 | MS.gene28451:CDS |
| TCAAGACGATCTAAAGGAGT+TGG | 0.473620 | 4.4:+8498527 | MS.gene28451:CDS |
| TCATCACAAACCTCGGTGCT+TGG | 0.475999 | 4.4:-8501280 | None:intergenic |
| TGAGCCATTTGGTCAGATTG+AGG | 0.478316 | 4.4:+8499862 | MS.gene28451:CDS |
| GGTGCTCACGGTCACGTTCA+CGG | 0.482477 | 4.4:-8496332 | None:intergenic |
| ACTGGTTCTGCCACAGGGGT+AGG | 0.482776 | 4.4:-8501214 | None:intergenic |
| TGGGTCGGTTCCTGTTCAGC+AGG | 0.500444 | 4.4:+8501126 | MS.gene28451:CDS |
| TATGAGTTCTTCTCGAAAGC+TGG | 0.501029 | 4.4:+8498166 | MS.gene28451:CDS |
| CTGCCTTTGCATGTTCAAGA+TGG | 0.501167 | 4.4:-8500033 | None:intergenic |
| GAGAGATGTCCGTCTGATCA+TGG | 0.501655 | 4.4:+8498496 | MS.gene28451:CDS |
| ACAACCTCAATCTGACCAAA+TGG | 0.502025 | 4.4:-8499866 | None:intergenic |
| CAGGTTGCCCGAGAAGTAGT+TGG | 0.506510 | 4.4:-8499400 | None:intergenic |
| CACTCGCTGGGAATTCCTAC+TGG | 0.508916 | 4.4:-8501232 | None:intergenic |
| GTGCTTCCGGTAAGTCCTCT+CGG | 0.509691 | 4.4:-8496205 | None:intergenic |
| CAAGACGATCTAAAGGAGTT+GGG | 0.512572 | 4.4:+8498528 | MS.gene28451:CDS |
| AGACATAAAAGAGGATGTAG+AGG | 0.512949 | 4.4:+8501401 | MS.gene28451:CDS |
| GAGGAAGAGTGTTCTAAATA+CGG | 0.513774 | 4.4:+8501420 | MS.gene28451:CDS |
| TTGCTTATGCAAAGATTGGC+TGG | 0.517382 | 4.4:+8500994 | MS.gene28451:CDS |
| TCTCTGGCCAACTACTTCTC+GGG | 0.517772 | 4.4:+8499393 | MS.gene28451:CDS |
| CGACGAGAATGGCTCTAAGA+AGG | 0.519514 | 4.4:+8496290 | MS.gene28451:CDS |
| CTTCCTCTTGACATGGAGAC+GGG | 0.525930 | 4.4:+8499893 | MS.gene28451:CDS |
| TTCAATAATAAACACTCGCT+GGG | 0.527139 | 4.4:-8501244 | None:intergenic |
| TGCCTTTGCATGTTCAAGAT+GGG | 0.529504 | 4.4:-8500032 | None:intergenic |
| AAGAGTGTTCTAAATACGGC+CGG | 0.531925 | 4.4:+8501424 | MS.gene28451:CDS |
| TGATGATGATGAAGGAGGAT+TGG | 0.532759 | 4.4:+8500255 | MS.gene28451:CDS |
| AACCTGAGGCAGACCCAGAA+AGG | 0.536328 | 4.4:+8497966 | MS.gene28451:CDS |
| TTCCTACTGGTTCTGCCACA+GGG | 0.541031 | 4.4:-8501219 | None:intergenic |
| AGGCAGCTCAGAGTTTAAAT+GGG | 0.544244 | 4.4:+8500050 | MS.gene28451:CDS |
| AGGAACTCAAGACGATCTAA+AGG | 0.546738 | 4.4:+8498521 | MS.gene28451:CDS |
| CTCTAAGAAGGATCGCGATA+GGG | 0.547806 | 4.4:+8496302 | MS.gene28451:CDS |
| CGCGGCGGAGACGACGAGAA+TGG | 0.548162 | 4.4:+8496279 | MS.gene28451:CDS |
| TCCAGTGGAGCTGCTGCAGT+AGG | 0.549417 | 4.4:+8499473 | MS.gene28451:CDS |
| TGCCCATCTTGAACATGCAA+AGG | 0.550622 | 4.4:+8500030 | MS.gene28451:CDS |
| GCTCTAAGAAGGATCGCGAT+AGG | 0.550790 | 4.4:+8496301 | MS.gene28451:CDS |
| ATAACACCTGGATTGCCAAA+AGG | 0.551187 | 4.4:-8501160 | None:intergenic |
| GCATAAGCAACGCTCTTGAG+TGG | 0.558643 | 4.4:-8500981 | None:intergenic |
| GGAAATTGGAGATTGCTGGC+AGG | 0.559200 | 4.4:+8500071 | MS.gene28451:CDS |
| ACCTGAGGCAGACCCAGAAA+GGG | 0.563699 | 4.4:+8497967 | MS.gene28451:CDS |
| CATAAGCAACGCTCTTGAGT+GGG | 0.564120 | 4.4:-8500980 | None:intergenic |
| GGGGTAGGCATGACTTGTGT+TGG | 0.567564 | 4.4:-8501199 | None:intergenic |
| AGTGGACAGAAAATTGTATG+TGG | 0.570567 | 4.4:+8499508 | MS.gene28451:CDS |
| CAGGGATAAGAAAGAGAATG+TGG | 0.571250 | 4.4:+8497943 | MS.gene28451:CDS |
| CATGGAGACGGGACACTGCA+AGG | 0.573578 | 4.4:+8499904 | MS.gene28451:CDS |
| GTGGACAGAAAATTGTATGT+GGG | 0.575032 | 4.4:+8499509 | MS.gene28451:CDS |
| AAATATCGTACAGACCTTGT+GGG | 0.582490 | 4.4:-8501027 | None:intergenic |
| GTTCTTCTCGAAAGCTGGCA+AGG | 0.584609 | 4.4:+8498171 | MS.gene28451:CDS |
| AACGAGCAATGCACATGAGA+TGG | 0.585575 | 4.4:+8501650 | MS.gene28451:CDS |
| GCCGCCGTCGAGATCGTCGT+CGG | 0.592650 | 4.4:-8496232 | None:intergenic |
| AATTTGGCTTCATATAAATG+TGG | 0.592878 | 4.4:-8502159 | None:intergenic |
| TTGGTGTGCCAACTGTGAAT+GGG | 0.595348 | 4.4:+8501107 | MS.gene28451:CDS |
| TCGACGGCGGCGAAGATAGG+CGG | 0.595350 | 4.4:+8496244 | MS.gene28451:CDS |
| TGATGCGATGTCAGTGCCAA+TGG | 0.595501 | 4.4:+8499361 | MS.gene28451:CDS |
| TGTGTACACAGAAGAAGTGC+AGG | 0.600350 | 4.4:+8501580 | MS.gene28451:intron |
| GGAGGAGCAACCGGAAGACA+AGG | 0.602697 | 4.4:+8496140 | MS.gene28451:CDS |
| ACTTCCTCTTGACATGGAGA+CGG | 0.607732 | 4.4:+8499892 | MS.gene28451:CDS |
| TCATCTGTTACAGATCATGT+TGG | 0.607952 | 4.4:+8500199 | MS.gene28451:CDS |
| GAAAGAGAATGTGGAACCTG+AGG | 0.611571 | 4.4:+8497952 | MS.gene28451:CDS |
| TGTACAACTTCCTCTTGACA+TGG | 0.615489 | 4.4:+8499886 | MS.gene28451:CDS |
| AAGATCGTTCACGGTGCTCA+CGG | 0.616078 | 4.4:-8496344 | None:intergenic |
| GCGAAGATAGGCGGAGCAAG+AGG | 0.616111 | 4.4:+8496253 | MS.gene28451:CDS |
| GAGAGGACTTACCGGAAGCA+CGG | 0.616261 | 4.4:+8496207 | MS.gene28451:CDS |
| GTTCAATCTAATGCTTCCAG+TGG | 0.619478 | 4.4:+8499458 | MS.gene28451:CDS |
| ATGGAGACGGGACACTGCAA+GGG | 0.619950 | 4.4:+8499905 | MS.gene28451:CDS |
| GTACTTGGAGAAGACGGTGG+AGG | 0.620385 | 4.4:+8496122 | MS.gene28451:CDS |
| ACTGACGCGGGTATAACACC+TGG | 0.622167 | 4.4:-8501172 | None:intergenic |
| CGACATAAATATGCAACACC+CGG | 0.623634 | 4.4:-8501443 | None:intergenic |
| ATGTCCGTCTGATCATGGAT+AGG | 0.625620 | 4.4:+8498501 | MS.gene28451:CDS |
| ACAGATGCCGTTAAAAGCAA+CGG | 0.627705 | 4.4:+8498132 | MS.gene28451:intron |
| GCAGACTTTGATGATGATGA+AGG | 0.629623 | 4.4:+8500247 | MS.gene28451:CDS |
| ACATGAGATGGTTTGCACGC+AGG | 0.634613 | 4.4:+8501662 | MS.gene28451:CDS |
| GGAACCGACCCATTCACAGT+TGG | 0.635458 | 4.4:-8501115 | None:intergenic |
| AGTTCCTATCCATGATCAGA+CGG | 0.636518 | 4.4:-8498505 | None:intergenic |
| TGGACAGAAAATTGTATGTG+GGG | 0.636625 | 4.4:+8499510 | MS.gene28451:CDS |
| AGAGTGTTCTAAATACGGCC+GGG | 0.637402 | 4.4:+8501425 | MS.gene28451:CDS |
| TGTCCCGTCTCCATGTCAAG+AGG | 0.648903 | 4.4:-8499896 | None:intergenic |
| AGGCAACCAACCAACCTGGT+AGG | 0.658360 | 4.4:-8498008 | None:intergenic |
| AGGCGGAGCAAGAGGTCACG+CGG | 0.658613 | 4.4:+8496261 | MS.gene28451:CDS |
| AGTCCTCTCGGATTTAATGT+CGG | 0.659142 | 4.4:-8496193 | None:intergenic |
| GACTTTGATGATGATGAAGG+AGG | 0.661760 | 4.4:+8500250 | MS.gene28451:CDS |
| GTACTTGCAGTTTGAAACAG+TGG | 0.665993 | 4.4:+8501609 | MS.gene28451:CDS |
| ATACGAGTACTTGGAGAAGA+CGG | 0.666924 | 4.4:+8496116 | MS.gene28451:CDS |
| GGCGCCGACGACGATCTCGA+CGG | 0.667091 | 4.4:+8496228 | MS.gene28451:CDS |
| GCCGACGACGATCTCGACGG+CGG | 0.668056 | 4.4:+8496231 | MS.gene28451:CDS |
| CTGGTACTGACATTCCCACA+AGG | 0.673381 | 4.4:+8501013 | MS.gene28451:CDS |
| ACCCCTGTGGCAGAACCAGT+AGG | 0.679311 | 4.4:+8501217 | MS.gene28451:CDS |
| TGTGCCAACTGTGAATGGGT+CGG | 0.685971 | 4.4:+8501111 | MS.gene28451:CDS |
| TCCTACTGGTTCTGCCACAG+GGG | 0.691418 | 4.4:-8501218 | None:intergenic |
| TCTTCACTTCAACATGACTG+AGG | 0.697877 | 4.4:+8499535 | MS.gene28451:CDS |
| CGAGTACTTGGAGAAGACGG+TGG | 0.704167 | 4.4:+8496119 | MS.gene28451:CDS |
| AGTAGGACCATATGGAGCAG+TGG | 0.705005 | 4.4:+8499490 | MS.gene28451:CDS |
| ACAAGTCATGCCTACCCCTG+TGG | 0.707457 | 4.4:+8501204 | MS.gene28451:CDS |
| GACTGAGGCTAATCTCCGAG+AGG | 0.707679 | 4.4:+8499550 | MS.gene28451:CDS |
| TTGTGTTGGTAGAACTGACG+CGG | 0.710439 | 4.4:-8501185 | None:intergenic |
| TGTAATGGTGAAACCCTCTG+AGG | 0.719486 | 4.4:+8499421 | MS.gene28451:CDS |
| CGGAGCAAGAGGTCACGCGG+CGG | 0.728879 | 4.4:+8496264 | MS.gene28451:CDS |
| TATGTTTGATCCAAGCACCG+AGG | 0.738501 | 4.4:+8501270 | MS.gene28451:CDS |
| TGTGTTGGTAGAACTGACGC+GGG | 0.742830 | 4.4:-8501184 | None:intergenic |
| TCACCGACATTAAATCCGAG+AGG | 0.753568 | 4.4:+8496190 | MS.gene28451:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAAGTTTAATGTAT+TGG | + | chr4.4:8496763-8496782 | MS.gene28451:intron | 10.0% |
| !! | AAATATTAGAAAATTAGTTG+TGG | + | chr4.4:8500299-8500318 | MS.gene28451:intron | 15.0% |
| !! | AATATATTTAGTCAAACTAT+AGG | - | chr4.4:8499728-8499747 | None:intergenic | 15.0% |
| !! | AATTATACTTTAAACAAAAG+AGG | - | chr4.4:8498455-8498474 | None:intergenic | 15.0% |
| !! | ATCAACAAAATTTAAACAAA+GGG | - | chr4.4:8500126-8500145 | None:intergenic | 15.0% |
| !! | ATTATACTTTAAACAAAAGA+GGG | - | chr4.4:8498454-8498473 | None:intergenic | 15.0% |
| !! | ATTGTTGAATTTAATAAAGA+GGG | - | chr4.4:8502072-8502091 | None:intergenic | 15.0% |
| !! | CAAATTTACTAAAGTTTATA+CGG | + | chr4.4:8500367-8500386 | MS.gene28451:intron | 15.0% |
| !! | TATCAACAAAATTTAAACAA+AGG | - | chr4.4:8500127-8500146 | None:intergenic | 15.0% |
| !! | TTCTATATATGAAATTATAC+AGG | + | chr4.4:8500476-8500495 | MS.gene28451:intron | 15.0% |
| !!! | AACATTTTATCAAACAAAAT+AGG | - | chr4.4:8500597-8500616 | None:intergenic | 15.0% |
| !!! | CTATTTAAAACAAACAAAAA+TGG | - | chr4.4:8498034-8498053 | None:intergenic | 15.0% |
| !!! | TAAATTTGTTTTCTTTAAAC+TGG | + | chr4.4:8499762-8499781 | MS.gene28451:intron | 15.0% |
| !!! | TTCATTAATTTGTTGTTATT+GGG | + | chr4.4:8497678-8497697 | MS.gene28451:intron | 15.0% |
| !!! | TTGCAATTTTTTAATTAGTT+CGG | + | chr4.4:8501557-8501576 | MS.gene28451:intron | 15.0% |
| !!! | TTTCATTAATTTGTTGTTAT+TGG | + | chr4.4:8497677-8497696 | MS.gene28451:intron | 15.0% |
| !!! | TTTTGTTCTTATAAAATAAG+AGG | + | chr4.4:8497483-8497502 | MS.gene28451:intron | 15.0% |
| !! | AAAAAAATTGCATATAACAC+TGG | - | chr4.4:8497464-8497483 | None:intergenic | 20.0% |
| !! | AGGTATAAGTATATCATTAA+TGG | + | chr4.4:8497570-8497589 | MS.gene28451:intron | 20.0% |
| !! | AGGTTACATGTAAATATATA+AGG | + | chr4.4:8500570-8500589 | MS.gene28451:intron | 20.0% |
| !! | ATTAGTATTACGTAGTTATT+GGG | + | chr4.4:8496805-8496824 | MS.gene28451:intron | 20.0% |
| !! | ATTGTATGCTTGAAAAAAAT+GGG | - | chr4.4:8498778-8498797 | None:intergenic | 20.0% |
| !! | GATTGTTGAATTTAATAAAG+AGG | - | chr4.4:8502073-8502092 | None:intergenic | 20.0% |
| !! | GGTTACATGTAAATATATAA+GGG | + | chr4.4:8500571-8500590 | MS.gene28451:intron | 20.0% |
| !! | TATATGATACTAGAACATTA+TGG | + | chr4.4:8497275-8497294 | MS.gene28451:intron | 20.0% |
| !! | TATTAGTATTACGTAGTTAT+TGG | + | chr4.4:8496804-8496823 | MS.gene28451:intron | 20.0% |
| !! | TCAACAAAATTTAAACAAAG+GGG | - | chr4.4:8500125-8500144 | None:intergenic | 20.0% |
| !! | TTATACTTTAAACAAAAGAG+GGG | - | chr4.4:8498453-8498472 | None:intergenic | 20.0% |
| !! | TTTATATGAAGCCAAATTTA+AGG | + | chr4.4:8502164-8502183 | MS.gene28451:CDS | 20.0% |
| !! | TTTATGTCTATATCAAAATC+TGG | - | chr4.4:8501390-8501409 | None:intergenic | 20.0% |
| !!! | AAACATTTCTTTTGTTGTTT+CGG | - | chr4.4:8500650-8500669 | None:intergenic | 20.0% |
| !!! | AACAACAAAAGAAATGTTTT+TGG | + | chr4.4:8500651-8500670 | MS.gene28451:intron | 20.0% |
| !!! | AGATTGAACAAGATTTTTTT+CGG | - | chr4.4:8499447-8499466 | None:intergenic | 20.0% |
| !!! | TTTAAAACAAACAAAAATGG+AGG | - | chr4.4:8498031-8498050 | None:intergenic | 20.0% |
| !!! | TTTATGAAATTTTTCTGTGT+TGG | + | chr4.4:8497405-8497424 | MS.gene28451:intron | 20.0% |
| !!! | TTTTGATATAGACATAAAAG+AGG | + | chr4.4:8501392-8501411 | MS.gene28451:CDS | 20.0% |
| ! | AAATTGCAACACATAATATG+TGG | - | chr4.4:8501546-8501565 | None:intergenic | 25.0% |
| ! | AACAATAGTACTCATCTATT+GGG | + | chr4.4:8500865-8500884 | MS.gene28451:intron | 25.0% |
| ! | AAGATATTGATCTAGAGAAA+AGG | - | chr4.4:8502115-8502134 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr4.4:8501820-8501839 | None:intergenic | 25.0% |
| ! | AATATGTGAAAACAATGAAC+AGG | - | chr4.4:8501073-8501092 | None:intergenic | 25.0% |
| ! | ATCTCTAGATCATTCTTAAT+CGG | - | chr4.4:8497232-8497251 | None:intergenic | 25.0% |
| ! | ATGACAATATTATAGAGAGT+TGG | + | chr4.4:8496931-8496950 | MS.gene28451:intron | 25.0% |
| ! | ATTTCTAATTCAATCATGTC+TGG | - | chr4.4:8496913-8496932 | None:intergenic | 25.0% |
| ! | CAGGTTCATAAAAATATAAG+AGG | - | chr4.4:8501054-8501073 | None:intergenic | 25.0% |
| ! | CATTGTATGCTTGAAAAAAA+TGG | - | chr4.4:8498779-8498798 | None:intergenic | 25.0% |
| ! | GACTTACAATTCATAAAAGA+AGG | - | chr4.4:8498872-8498891 | None:intergenic | 25.0% |
| ! | GCAATATTTCTTAAGGTTAA+AGG | - | chr4.4:8499959-8499978 | None:intergenic | 25.0% |
| ! | GTGAAAAGCAATATTTCTTA+AGG | - | chr4.4:8499966-8499985 | None:intergenic | 25.0% |
| ! | TAACAATAGTACTCATCTAT+TGG | + | chr4.4:8500864-8500883 | MS.gene28451:intron | 25.0% |
| ! | TATTTCTTAAGGTTAAAGGT+TGG | - | chr4.4:8499955-8499974 | None:intergenic | 25.0% |
| ! | TCATAAAAGAAGGAAAAGAT+GGG | - | chr4.4:8498862-8498881 | None:intergenic | 25.0% |
| ! | TGACAATATTATAGAGAGTT+GGG | + | chr4.4:8496932-8496951 | MS.gene28451:intron | 25.0% |
| ! | TTCATAAAAGAAGGAAAAGA+TGG | - | chr4.4:8498863-8498882 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr4.4:8501832-8501851 | MS.gene28451:intron | 25.0% |
| ! | TTGAATTTAATAAAGAGGGA+CGG | - | chr4.4:8502068-8502087 | None:intergenic | 25.0% |
| ! | TTGATTGCATATATTTGTAG+AGG | - | chr4.4:8500682-8500701 | None:intergenic | 25.0% |
| !! | AATTTGGCTTCATATAAATG+TGG | - | chr4.4:8502162-8502181 | None:intergenic | 25.0% |
| !! | TAAAATTTTGCTAATGCACT+AGG | - | chr4.4:8498980-8498999 | None:intergenic | 25.0% |
| !!! | AACCACTTTTTGAAAACTTT+TGG | - | chr4.4:8501917-8501936 | None:intergenic | 25.0% |
| !!! | ACATTAGTTTTTCTTCTGTA+CGG | + | chr4.4:8500915-8500934 | MS.gene28451:intron | 25.0% |
| !!! | TCACTTTAACTTGTATTCAT+TGG | + | chr4.4:8500001-8500020 | MS.gene28451:intron | 25.0% |
| !!! | TGCTCTATTGATTTTTCAAT+TGG | + | chr4.4:8496698-8496717 | MS.gene28451:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr4.4:8501819-8501838 | MS.gene28451:intron | 25.0% |
| !!! | TTTGTTTTCTTTAAACTGGT+AGG | + | chr4.4:8499766-8499785 | MS.gene28451:intron | 25.0% |
| !!! | TTTTAGATTTTTGAGCCATT+TGG | + | chr4.4:8499851-8499870 | MS.gene28451:intron | 25.0% |
| AAAAAACAAAGCCAACAGAA+AGG | - | chr4.4:8500836-8500855 | None:intergenic | 30.0% | |
| AAAAACAAAGCCAACAGAAA+GGG | - | chr4.4:8500835-8500854 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4.4:8501845-8501864 | MS.gene28451:intron | 30.0% | |
| AACACATCAGAATGATAATC+TGG | - | chr4.4:8502043-8502062 | None:intergenic | 30.0% | |
| AATATTCTTGAGTTCTCTGT+TGG | + | chr4.4:8501716-8501735 | MS.gene28451:intron | 30.0% | |
| AATCAATTCATCACAAACCT+CGG | - | chr4.4:8501290-8501309 | None:intergenic | 30.0% | |
| AATGCCTATTGTAGAAAAGA+TGG | + | chr4.4:8496957-8496976 | MS.gene28451:intron | 30.0% | |
| ACAATAGTACTCATCTATTG+GGG | + | chr4.4:8500866-8500885 | MS.gene28451:intron | 30.0% | |
| ACCAAACAGCAACTAATTAA+TGG | - | chr4.4:8497539-8497558 | None:intergenic | 30.0% | |
| ACTCTGCTTTCAGTTAAATA+GGG | + | chr4.4:8498279-8498298 | MS.gene28451:intron | 30.0% | |
| AGAGTAAAATAAGAGAAGCA+GGG | + | chr4.4:8496859-8496878 | MS.gene28451:intron | 30.0% | |
| AGTGTTCATGTTTGATAGAT+AGG | + | chr4.4:8500510-8500529 | MS.gene28451:intron | 30.0% | |
| CAAATTCAACTAGTATGACA+TGG | + | chr4.4:8497866-8497885 | MS.gene28451:intron | 30.0% | |
| CACACATATATATACACACA+CGG | - | chr4.4:8499656-8499675 | None:intergenic | 30.0% | |
| CATAAAAGAAGGAAAAGATG+GGG | - | chr4.4:8498861-8498880 | None:intergenic | 30.0% | |
| CATGTCATACTAGTTGAATT+TGG | - | chr4.4:8497868-8497887 | None:intergenic | 30.0% | |
| GACAATATTATAGAGAGTTG+GGG | + | chr4.4:8496933-8496952 | MS.gene28451:intron | 30.0% | |
| GATCTTGGAAAGAAAAACTA+AGG | - | chr4.4:8500783-8500802 | None:intergenic | 30.0% | |
| GCAAACAACATGAAATGAAA+AGG | - | chr4.4:8496681-8496700 | None:intergenic | 30.0% | |
| GTAGTGTGATTAATCATACA+TGG | - | chr4.4:8502014-8502033 | None:intergenic | 30.0% | |
| GTGAGTATGTTAATTGTTCT+GGG | - | chr4.4:8497130-8497149 | None:intergenic | 30.0% | |
| TATCACGACAAGATTCTAAT+CGG | - | chr4.4:8499798-8499817 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr4.4:8501794-8501813 | None:intergenic | 30.0% | |
| TCAAGATTCGTCCTTAAATT+TGG | - | chr4.4:8502178-8502197 | None:intergenic | 30.0% | |
| TCAGAGTTTAAATGGGAAAT+TGG | + | chr4.4:8500057-8500076 | MS.gene28451:CDS | 30.0% | |
| TGATCTAGAGATTAATGAGT+TGG | + | chr4.4:8497240-8497259 | MS.gene28451:intron | 30.0% | |
| TGCTTGAAAAAAATGGGAAT+AGG | - | chr4.4:8498772-8498791 | None:intergenic | 30.0% | |
| TGGAAACTGATAACATGAAA+AGG | - | chr4.4:8501526-8501545 | None:intergenic | 30.0% | |
| TGTGAGTATGTTAATTGTTC+TGG | - | chr4.4:8497131-8497150 | None:intergenic | 30.0% | |
| TTCAATAATAAACACTCGCT+GGG | - | chr4.4:8501247-8501266 | None:intergenic | 30.0% | |
| TTGAAATGTGATGCTAAACT+AGG | + | chr4.4:8497506-8497525 | MS.gene28451:intron | 30.0% | |
| ! | AATTTTTCTGTGTTGGAATG+TGG | + | chr4.4:8497412-8497431 | MS.gene28451:intron | 30.0% |
| ! | AGAGATTAATGAGTTGGATA+GGG | + | chr4.4:8497246-8497265 | MS.gene28451:intron | 30.0% |
| ! | AGTGAGCTAATTAAAGCATT+AGG | - | chr4.4:8498704-8498723 | None:intergenic | 30.0% |
| ! | ATTTATACGGTCTGAGATAT+TGG | + | chr4.4:8498059-8498078 | MS.gene28451:intron | 30.0% |
| ! | ATTTGATGTTCCATGTTTTC+AGG | + | chr4.4:8498472-8498491 | MS.gene28451:intron | 30.0% |
| ! | GTCCAAAAGTTTTCAAAAAG+TGG | + | chr4.4:8501912-8501931 | MS.gene28451:intron | 30.0% |
| ! | GTGAGCTAATTAAAGCATTA+GGG | - | chr4.4:8498703-8498722 | None:intergenic | 30.0% |
| ! | TAGAGATTAATGAGTTGGAT+AGG | + | chr4.4:8497245-8497264 | MS.gene28451:intron | 30.0% |
| ! | TCGTTATCTGAAACATCATA+TGG | - | chr4.4:8501331-8501350 | None:intergenic | 30.0% |
| ! | TCTACCATCTTTTCTACAAT+AGG | - | chr4.4:8496964-8496983 | None:intergenic | 30.0% |
| ! | TCTGAAACATCATATGGTTA+TGG | - | chr4.4:8501325-8501344 | None:intergenic | 30.0% |
| !! | TAATCTGGGTTGATCTAAAA+AGG | + | chr4.4:8497646-8497665 | MS.gene28451:intron | 30.0% |
| AAAACAAAGCCAACAGAAAG+GGG | - | chr4.4:8500834-8500853 | None:intergenic | 35.0% | |
| AAAATATCGTACAGACCTTG+TGG | - | chr4.4:8501031-8501050 | None:intergenic | 35.0% | |
| AAACATTGATATCCTCACCA+CGG | - | chr4.4:8499624-8499643 | None:intergenic | 35.0% | |
| AAATATCGTACAGACCTTGT+GGG | - | chr4.4:8501030-8501049 | None:intergenic | 35.0% | |
| AAATGGGAATAGGACTGAAA+AGG | - | chr4.4:8498762-8498781 | None:intergenic | 35.0% | |
| AACAACAACCAATCCTAAGT+AGG | - | chr4.4:8497325-8497344 | None:intergenic | 35.0% | |
| AAGCTGAGTTTCATTATGCA+AGG | - | chr4.4:8499206-8499225 | None:intergenic | 35.0% | |
| ACAACAACCAATCCTAAGTA+GGG | - | chr4.4:8497324-8497343 | None:intergenic | 35.0% | |
| ACACTGGCAACATAAACAAT+AGG | - | chr4.4:8497448-8497467 | None:intergenic | 35.0% | |
| ACCATTTAGACAAGAAGGAT+TGG | - | chr4.4:8499074-8499093 | None:intergenic | 35.0% | |
| ACTTTCATTTGACCAGTAGT+GGG | + | chr4.4:8498940-8498959 | MS.gene28451:intron | 35.0% | |
| AGAATACAGCAAAGAGATGT+AGG | - | chr4.4:8499257-8499276 | None:intergenic | 35.0% | |
| AGACATAAAAGAGGATGTAG+AGG | + | chr4.4:8501401-8501420 | MS.gene28451:CDS | 35.0% | |
| AGGTTTGATGCTCATGAATT+TGG | + | chr4.4:8498908-8498927 | MS.gene28451:intron | 35.0% | |
| AGTGGACAGAAAATTGTATG+TGG | + | chr4.4:8499508-8499527 | MS.gene28451:CDS | 35.0% | |
| ATAAGGAAAGGGAAAAGGAA+CGG | + | chr4.4:8496493-8496512 | MS.gene28451:intron | 35.0% | |
| ATGATTTCCTGTTTGCTCTT+TGG | + | chr4.4:8498104-8498123 | MS.gene28451:intron | 35.0% | |
| CACTCTGCTTTCAGTTAAAT+AGG | + | chr4.4:8498278-8498297 | MS.gene28451:intron | 35.0% | |
| CACTGGCAACATAAACAATA+GGG | - | chr4.4:8497447-8497466 | None:intergenic | 35.0% | |
| CTGCAAGTCAAGTTAAAATG+AGG | - | chr4.4:8497917-8497936 | None:intergenic | 35.0% | |
| CTTCAATAATAAACACTCGC+TGG | - | chr4.4:8501248-8501267 | None:intergenic | 35.0% | |
| GAACGTCAGTAACAAACAAA+TGG | - | chr4.4:8500165-8500184 | None:intergenic | 35.0% | |
| GAATACAGCAAAGAGATGTA+GGG | - | chr4.4:8499256-8499275 | None:intergenic | 35.0% | |
| GAGAGTAAAATAAGAGAAGC+AGG | + | chr4.4:8496858-8496877 | MS.gene28451:intron | 35.0% | |
| GTATTACGTAGTTATTGGGA+TGG | + | chr4.4:8496809-8496828 | MS.gene28451:intron | 35.0% | |
| GTCCATATTAGAGTCCAAAT+TGG | - | chr4.4:8497802-8497821 | None:intergenic | 35.0% | |
| GTGGACAGAAAATTGTATGT+GGG | + | chr4.4:8499509-8499528 | MS.gene28451:CDS | 35.0% | |
| TCATCTGTTACAGATCATGT+TGG | + | chr4.4:8500199-8500218 | MS.gene28451:CDS | 35.0% | |
| TGCTTGACTGTATTCTTGAT+TGG | + | chr4.4:8498635-8498654 | MS.gene28451:intron | 35.0% | |
| TGGACAGAAAATTGTATGTG+GGG | + | chr4.4:8499510-8499529 | MS.gene28451:CDS | 35.0% | |
| TTCGTATGAGTACAGAGATA+CGG | - | chr4.4:8499098-8499117 | None:intergenic | 35.0% | |
| ! | ATGAGAATTTTGTGGATGTG+TGG | + | chr4.4:8496882-8496901 | MS.gene28451:intron | 35.0% |
| ! | CAGAATGATAATCTGGTTCA+TGG | - | chr4.4:8502036-8502055 | None:intergenic | 35.0% |
| ! | CTGTTTGGTTCAATTCTTCA+AGG | + | chr4.4:8497550-8497569 | MS.gene28451:CDS | 35.0% |
| ! | GATGTCAGTGTTCTTCTTTT+TGG | - | chr4.4:8496172-8496191 | None:intergenic | 35.0% |
| ! | GCCATTAATTAGTTGCTGTT+TGG | + | chr4.4:8497535-8497554 | MS.gene28451:intron | 35.0% |
| ! | TATGATCCTTACTGCAGTTT+TGG | + | chr4.4:8497726-8497745 | MS.gene28451:intron | 35.0% |
| ! | TTGAAATTTCAGTGCTGTTG+AGG | + | chr4.4:8500537-8500556 | MS.gene28451:intron | 35.0% |
| !! | GAGGAAGAGTGTTCTAAATA+CGG | + | chr4.4:8501420-8501439 | MS.gene28451:CDS | 35.0% |
| !! | GGGAAGTTATTGTTTGTTGT+TGG | + | chr4.4:8500886-8500905 | MS.gene28451:intron | 35.0% |
| !!! | CTCATTTTAACTTGACTTGC+AGG | + | chr4.4:8497915-8497934 | MS.gene28451:intron | 35.0% |
| AAAAGAAGGAAAAGATGGGG+TGG | - | chr4.4:8498858-8498877 | None:intergenic | 40.0% | |
| AAGAAGAGTAGATCAGATGC+AGG | + | chr4.4:8497042-8497061 | MS.gene28451:intron | 40.0% | |
| AAGAGATAAGGAGAGAGAGA+AGG | + | chr4.4:8496521-8496540 | MS.gene28451:intron | 40.0% | |
| AAGGCAGCTCAGAGTTTAAA+TGG | + | chr4.4:8500049-8500068 | MS.gene28451:CDS | 40.0% | |
| AAGGTTTGCAGCATAACATC+AGG | - | chr4.4:8502096-8502115 | None:intergenic | 40.0% | |
| AATGGGAAATTGGAGATTGC+TGG | + | chr4.4:8500067-8500086 | MS.gene28451:CDS | 40.0% | |
| ACAACCTCAATCTGACCAAA+TGG | - | chr4.4:8499869-8499888 | None:intergenic | 40.0% | |
| ACAGATGCCGTTAAAAGCAA+CGG | + | chr4.4:8498132-8498151 | MS.gene28451:intron | 40.0% | |
| ACATCTCTCACCTGAAAACA+TGG | - | chr4.4:8498485-8498504 | None:intergenic | 40.0% | |
| ACATGAAAAGGACACAGCAA+AGG | - | chr4.4:8501514-8501533 | None:intergenic | 40.0% | |
| ACGGAACCATTTAGACAAGA+AGG | - | chr4.4:8499079-8499098 | None:intergenic | 40.0% | |
| AGAAGAGTAGATCAGATGCA+GGG | + | chr4.4:8497043-8497062 | MS.gene28451:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr4.4:8501855-8501874 | MS.gene28451:intron | 40.0% | |
| AGATGGTAGAAACTCAGCTT+AGG | + | chr4.4:8496974-8496993 | MS.gene28451:intron | 40.0% | |
| AGCGTTGCTTATGCAAAGAT+TGG | + | chr4.4:8500990-8501009 | MS.gene28451:CDS | 40.0% | |
| AGGAACTCAAGACGATCTAA+AGG | + | chr4.4:8498521-8498540 | MS.gene28451:CDS | 40.0% | |
| AGGCAGCTCAGAGTTTAAAT+GGG | + | chr4.4:8500050-8500069 | MS.gene28451:CDS | 40.0% | |
| AGGTAGTAGAGAGAAAGAGA+GGG | + | chr4.4:8496398-8496417 | MS.gene28451:intron | 40.0% | |
| AGGTTTGCAGCATAACATCA+GGG | - | chr4.4:8502095-8502114 | None:intergenic | 40.0% | |
| AGTCAAATCACTAGAGGCAA+GGG | + | chr4.4:8497193-8497212 | MS.gene28451:intron | 40.0% | |
| AGTCCTCTCGGATTTAATGT+CGG | - | chr4.4:8496196-8496215 | None:intergenic | 40.0% | |
| AGTGCGGTGATAAAAGATCT+TGG | - | chr4.4:8500798-8500817 | None:intergenic | 40.0% | |
| AGTTCCTATCCATGATCAGA+CGG | - | chr4.4:8498508-8498527 | None:intergenic | 40.0% | |
| ATAACACCTGGATTGCCAAA+AGG | - | chr4.4:8501163-8501182 | None:intergenic | 40.0% | |
| ATAAGGAGAGAGAGAAGGAA+CGG | + | chr4.4:8496526-8496545 | MS.gene28451:intron | 40.0% | |
| ATACACGCACAAATACCTCT+CGG | - | chr4.4:8499568-8499587 | None:intergenic | 40.0% | |
| ATACGAGTACTTGGAGAAGA+CGG | + | chr4.4:8496116-8496135 | MS.gene28451:CDS | 40.0% | |
| ATATTTCCCAACTGCAGCAT+TGG | + | chr4.4:8501088-8501107 | MS.gene28451:intron | 40.0% | |
| ATGCAAGTTCTTTATGCTGC+AGG | + | chr4.4:8499324-8499343 | MS.gene28451:intron | 40.0% | |
| ATTGGGTTTCAATGCTAGCA+CGG | + | chr4.4:8497695-8497714 | MS.gene28451:intron | 40.0% | |
| ATTTCGAAAACAGAGATGGC+AGG | + | chr4.4:8496625-8496644 | MS.gene28451:intron | 40.0% | |
| CAAGACGATCTAAAGGAGTT+GGG | + | chr4.4:8498528-8498547 | MS.gene28451:CDS | 40.0% | |
| CAGAGTAGTCAAATCACTAG+AGG | + | chr4.4:8497187-8497206 | MS.gene28451:intron | 40.0% | |
| CAGAGTTCGAATCTTGGTTA+GGG | + | chr4.4:8497093-8497112 | MS.gene28451:intron | 40.0% | |
| CAGGGATAAGAAAGAGAATG+TGG | + | chr4.4:8497943-8497962 | MS.gene28451:CDS | 40.0% | |
| CGACATAAATATGCAACACC+CGG | - | chr4.4:8501446-8501465 | None:intergenic | 40.0% | |
| CGAGATTTCGAAAACAGAGA+TGG | + | chr4.4:8496621-8496640 | MS.gene28451:intron | 40.0% | |
| CGCCAATTTGGACTCTAATA+TGG | + | chr4.4:8497797-8497816 | MS.gene28451:intron | 40.0% | |
| GAAGATCGATGACATAGTCT+TGG | + | chr4.4:8498733-8498752 | MS.gene28451:intron | 40.0% | |
| GAATTGTAAGTCTCTCACGT+TGG | + | chr4.4:8498880-8498899 | MS.gene28451:intron | 40.0% | |
| GACTTTCATTTGACCAGTAG+TGG | + | chr4.4:8498939-8498958 | MS.gene28451:intron | 40.0% | |
| GAGAGATAAGGAAAGGGAAA+AGG | + | chr4.4:8496488-8496507 | MS.gene28451:intron | 40.0% | |
| GCCAATCCTTCTTGTCTAAA+TGG | + | chr4.4:8499070-8499089 | MS.gene28451:intron | 40.0% | |
| GGAAAGAAAAACTAAGGACC+CGG | - | chr4.4:8500777-8500796 | None:intergenic | 40.0% | |
| GTTCAATCTAATGCTTCCAG+TGG | + | chr4.4:8499458-8499477 | MS.gene28451:CDS | 40.0% | |
| GTTGATCACAGCTATCTTCA+TGG | + | chr4.4:8501684-8501703 | MS.gene28451:CDS | 40.0% | |
| TAAGGAAAGGGAAAAGGAAC+GGG | + | chr4.4:8496494-8496513 | MS.gene28451:intron | 40.0% | |
| TACAGATCATGTTGGAAGTC+AGG | + | chr4.4:8500207-8500226 | MS.gene28451:CDS | 40.0% | |
| TACTGACGTTCGTCAAATTC+AGG | + | chr4.4:8500174-8500193 | MS.gene28451:intron | 40.0% | |
| TAGATCAACCCAGATTATCC+TGG | - | chr4.4:8497643-8497662 | None:intergenic | 40.0% | |
| TAGTCAAATCACTAGAGGCA+AGG | + | chr4.4:8497192-8497211 | MS.gene28451:intron | 40.0% | |
| TAGTTATTGGGATGGAGTGT+TGG | + | chr4.4:8496817-8496836 | MS.gene28451:intron | 40.0% | |
| TATGAGTTCTTCTCGAAAGC+TGG | + | chr4.4:8498166-8498185 | MS.gene28451:CDS | 40.0% | |
| TCAAGACGATCTAAAGGAGT+TGG | + | chr4.4:8498527-8498546 | MS.gene28451:CDS | 40.0% | |
| TCTTCACTTCAACATGACTG+AGG | + | chr4.4:8499535-8499554 | MS.gene28451:CDS | 40.0% | |
| TGCCACGTTCCTACAAATAA+GGG | + | chr4.4:8498377-8498396 | MS.gene28451:intron | 40.0% | |
| TGCCTTTGCATGTTCAAGAT+GGG | - | chr4.4:8500035-8500054 | None:intergenic | 40.0% | |
| TGTACAACTTCCTCTTGACA+TGG | + | chr4.4:8499886-8499905 | MS.gene28451:CDS | 40.0% | |
| TGTGTGTGTGTGTTAACTGA+GGG | + | chr4.4:8499672-8499691 | MS.gene28451:intron | 40.0% | |
| TGTTAGAAACCTGAACGACA+GGG | + | chr4.4:8500406-8500425 | MS.gene28451:intron | 40.0% | |
| TTAAATCCGAGAGGACTTAC+CGG | + | chr4.4:8496199-8496218 | MS.gene28451:CDS | 40.0% | |
| TTGCCACGTTCCTACAAATA+AGG | + | chr4.4:8498376-8498395 | MS.gene28451:intron | 40.0% | |
| TTGCTTATGCAAAGATTGGC+TGG | + | chr4.4:8500994-8501013 | MS.gene28451:CDS | 40.0% | |
| TTGGATGAATCCTTGTCTTC+CGG | - | chr4.4:8496153-8496172 | None:intergenic | 40.0% | |
| TTGTTAGAAACCTGAACGAC+AGG | + | chr4.4:8500405-8500424 | MS.gene28451:intron | 40.0% | |
| ! | AAGCAGGGATGAGAATTTTG+TGG | + | chr4.4:8496874-8496893 | MS.gene28451:intron | 40.0% |
| ! | ACATTTTTGCAACGGATGCA+AGG | + | chr4.4:8499040-8499059 | MS.gene28451:intron | 40.0% |
| ! | GTACTTGCAGTTTGAAACAG+TGG | + | chr4.4:8501609-8501628 | MS.gene28451:CDS | 40.0% |
| ! | TGATGATGATGAAGGAGGAT+TGG | + | chr4.4:8500255-8500274 | MS.gene28451:CDS | 40.0% |
| !! | AAGAGTGTTCTAAATACGGC+CGG | + | chr4.4:8501424-8501443 | MS.gene28451:CDS | 40.0% |
| !! | AGGGGAAGTATCATGTATAG+AGG | - | chr4.4:8498435-8498454 | None:intergenic | 40.0% |
| !! | GACTTTGATGATGATGAAGG+AGG | + | chr4.4:8500250-8500269 | MS.gene28451:CDS | 40.0% |
| !! | GCAGACTTTGATGATGATGA+AGG | + | chr4.4:8500247-8500266 | MS.gene28451:CDS | 40.0% |
| !! | GGCTGCTACTTTATTGTGTA+TGG | + | chr4.4:8498300-8498319 | MS.gene28451:intron | 40.0% |
| !!! | AAGATTTTTTTCGGCCTCAG+AGG | - | chr4.4:8499438-8499457 | None:intergenic | 40.0% |
| !!! | AGATTTTTTTCGGCCTCAGA+GGG | - | chr4.4:8499437-8499456 | None:intergenic | 40.0% |
| !!! | TCTCTCTCCGTTGCTTTTAA+CGG | - | chr4.4:8498142-8498161 | None:intergenic | 40.0% |
| !!! | TGCAGTTTTGGCTCATGTAT+AGG | + | chr4.4:8497738-8497757 | MS.gene28451:intron | 40.0% |
| !!! | TGTTTTTGAGACCAACCAAC+CGG | + | chr4.4:8500755-8500774 | MS.gene28451:intron | 40.0% |
| AACGAGCAATGCACATGAGA+TGG | + | chr4.4:8501650-8501669 | MS.gene28451:CDS | 45.0% | |
| AAGAGGAGAAAGAGAGACCA+AGG | + | chr4.4:8496562-8496581 | MS.gene28451:intron | 45.0% | |
| ACAGTTCTCTGATCCCTTTC+TGG | - | chr4.4:8497983-8498002 | None:intergenic | 45.0% | |
| ACTTCCTCTTGACATGGAGA+CGG | + | chr4.4:8499892-8499911 | MS.gene28451:CDS | 45.0% | |
| AGAAAAACTAAGGACCCGGT+TGG | - | chr4.4:8500773-8500792 | None:intergenic | 45.0% | |
| AGGCAGATGTAAGCATTCAC+TGG | - | chr4.4:8498415-8498434 | None:intergenic | 45.0% | |
| ATAGGGAGAGAGAAAAGGAG+AGG | + | chr4.4:8496460-8496479 | MS.gene28451:intron | 45.0% | |
| ATGCTAAAAGCCTGCTGAAC+AGG | - | chr4.4:8501139-8501158 | None:intergenic | 45.0% | |
| ATGTCCGTCTGATCATGGAT+AGG | + | chr4.4:8498501-8498520 | MS.gene28451:CDS | 45.0% | |
| ATTATCCTGGTATCCCTGGT+CGG | - | chr4.4:8497630-8497649 | None:intergenic | 45.0% | |
| ATTGGTGTGCCAACTGTGAA+TGG | + | chr4.4:8501106-8501125 | MS.gene28451:CDS | 45.0% | |
| CAACCAATCCTAAGTAGGGT+TGG | - | chr4.4:8497320-8497339 | None:intergenic | 45.0% | |
| CAGGGATACCAGGATAATCT+GGG | + | chr4.4:8497632-8497651 | MS.gene28451:intron | 45.0% | |
| CAGTTCTCTGATCCCTTTCT+GGG | - | chr4.4:8497982-8498001 | None:intergenic | 45.0% | |
| CATAAGCAACGCTCTTGAGT+GGG | - | chr4.4:8500983-8501002 | None:intergenic | 45.0% | |
| CATGAGCCAAAACTGCAGTA+AGG | - | chr4.4:8497735-8497754 | None:intergenic | 45.0% | |
| CATGCCATAGTGATGAGGAA+TGG | + | chr4.4:8498664-8498683 | MS.gene28451:intron | 45.0% | |
| CATTCCTCATCACTATGGCA+TGG | - | chr4.4:8498666-8498685 | None:intergenic | 45.0% | |
| CCACGTTCCTACAAATAAGG+GGG | + | chr4.4:8498379-8498398 | MS.gene28451:intron | 45.0% | |
| CCAGAGTTCGAATCTTGGTT+AGG | + | chr4.4:8497092-8497111 | MS.gene28451:intron | 45.0% | |
| CCTAACCAAGATTCGAACTC+TGG | - | chr4.4:8497095-8497114 | None:intergenic | 45.0% | |
| CTCACCATTCCTCATCACTA+TGG | - | chr4.4:8498671-8498690 | None:intergenic | 45.0% | |
| CTGCCTTTGCATGTTCAAGA+TGG | - | chr4.4:8500036-8500055 | None:intergenic | 45.0% | |
| CTTCGACGAATACGAGTACT+TGG | + | chr4.4:8496107-8496126 | MS.gene28451:CDS | 45.0% | |
| GAAACTCAGCTTAGGTGGTT+CGG | + | chr4.4:8496982-8497001 | MS.gene28451:intron | 45.0% | |
| GAAAGAGAATGTGGAACCTG+AGG | + | chr4.4:8497952-8497971 | MS.gene28451:CDS | 45.0% | |
| GAGAGATAAGGAGAGGGATA+GGG | + | chr4.4:8496443-8496462 | MS.gene28451:intron | 45.0% | |
| GAGGTAGTAGAGAGAAAGAG+AGG | + | chr4.4:8496397-8496416 | MS.gene28451:intron | 45.0% | |
| GATTGCTGGCAGGACTATAA+AGG | + | chr4.4:8500081-8500100 | MS.gene28451:CDS | 45.0% | |
| GCCACGTTCCTACAAATAAG+GGG | + | chr4.4:8498378-8498397 | MS.gene28451:intron | 45.0% | |
| GCTGTTGAGGATTTGCACTT+AGG | + | chr4.4:8500550-8500569 | MS.gene28451:intron | 45.0% | |
| GGAGAGGAGAGATAAGGAAA+GGG | + | chr4.4:8496482-8496501 | MS.gene28451:intron | 45.0% | |
| GGCAGATGTAAGCATTCACT+GGG | - | chr4.4:8498414-8498433 | None:intergenic | 45.0% | |
| GTGAACACCAAAGAGCAAAC+AGG | - | chr4.4:8498114-8498133 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTTAACTG+AGG | + | chr4.4:8499671-8499690 | MS.gene28451:intron | 45.0% | |
| TAAGGAGAGAGAGAAGGAAC+GGG | + | chr4.4:8496527-8496546 | MS.gene28451:intron | 45.0% | |
| TAATGCACTAGGCAGTAGGA+TGG | - | chr4.4:8498969-8498988 | None:intergenic | 45.0% | |
| TAGAGAGAAAGAGAGGGAGA+AGG | + | chr4.4:8496404-8496423 | MS.gene28451:intron | 45.0% | |
| TAGCCAACCCTACTTAGGAT+TGG | + | chr4.4:8497314-8497333 | MS.gene28451:intron | 45.0% | |
| TAGGGAGAGAGAAAAGGAGA+GGG | + | chr4.4:8496461-8496480 | MS.gene28451:intron | 45.0% | |
| TCACCGACATTAAATCCGAG+AGG | + | chr4.4:8496190-8496209 | MS.gene28451:CDS | 45.0% | |
| TCAGAGGGTTTCACCATTAC+AGG | - | chr4.4:8499422-8499441 | None:intergenic | 45.0% | |
| TGAGCCATTTGGTCAGATTG+AGG | + | chr4.4:8499862-8499881 | MS.gene28451:CDS | 45.0% | |
| TGCCCATCTTGAACATGCAA+AGG | + | chr4.4:8500030-8500049 | MS.gene28451:CDS | 45.0% | |
| TGGTAGAAACTCAGCTTAGG+TGG | + | chr4.4:8496977-8496996 | MS.gene28451:intron | 45.0% | |
| TGTAATGGTGAAACCCTCTG+AGG | + | chr4.4:8499421-8499440 | MS.gene28451:CDS | 45.0% | |
| TTAGCCATGCCATAGTGATG+AGG | + | chr4.4:8498659-8498678 | MS.gene28451:intron | 45.0% | |
| TTGCTAATGCACTAGGCAGT+AGG | - | chr4.4:8498973-8498992 | None:intergenic | 45.0% | |
| TTGGTGTGCCAACTGTGAAT+GGG | + | chr4.4:8501107-8501126 | MS.gene28451:CDS | 45.0% | |
| TTTCATTATCTGCCGTGGTG+AGG | + | chr4.4:8499609-8499628 | MS.gene28451:intron | 45.0% | |
| TTTCTGTCCACTGCTCCATA+TGG | - | chr4.4:8499500-8499519 | None:intergenic | 45.0% | |
| ! | AGAGTGTTCTAAATACGGCC+GGG | + | chr4.4:8501425-8501444 | MS.gene28451:CDS | 45.0% |
| ! | CAGGCTTTTAGCATGCCTTT+TGG | + | chr4.4:8501145-8501164 | MS.gene28451:CDS | 45.0% |
| ! | CTCTAAGAAGGATCGCGATA+GGG | + | chr4.4:8496302-8496321 | MS.gene28451:CDS | 45.0% |
| ! | GCACGCACACATTTTTGCAA+CGG | + | chr4.4:8499032-8499051 | MS.gene28451:intron | 45.0% |
| ! | TATGTTTGATCCAAGCACCG+AGG | + | chr4.4:8501270-8501289 | MS.gene28451:CDS | 45.0% |
| ! | TGTGTACACAGAAGAAGTGC+AGG | + | chr4.4:8501580-8501599 | MS.gene28451:intron | 45.0% |
| ! | TTGTGTTGGTAGAACTGACG+CGG | - | chr4.4:8501188-8501207 | None:intergenic | 45.0% |
| !! | ACTTGACTTGCAGGAGATTC+AGG | + | chr4.4:8497924-8497943 | MS.gene28451:intron | 45.0% |
| !! | CTTGACTTGCAGGAGATTCA+GGG | + | chr4.4:8497925-8497944 | MS.gene28451:intron | 45.0% |
| !! | TATTGGGATGGAGTGTTGGA+AGG | + | chr4.4:8496821-8496840 | MS.gene28451:intron | 45.0% |
| !! | TCACCGCACTTTCACTTTTC+AGG | + | chr4.4:8500808-8500827 | MS.gene28451:intron | 45.0% |
| !! | TGCTGTTTCATTATCTGCCG+TGG | + | chr4.4:8499604-8499623 | MS.gene28451:intron | 45.0% |
| !!! | ACTGTTTTTGCCTACCAGGT+TGG | + | chr4.4:8497998-8498017 | MS.gene28451:intron | 45.0% |
| !!! | GAGAACTGTTTTTGCCTACC+AGG | + | chr4.4:8497994-8498013 | MS.gene28451:CDS | 45.0% |
| !!! | GTTTTTGAGACCAACCAACC+GGG | + | chr4.4:8500756-8500775 | MS.gene28451:intron | 45.0% |
| !!! | TTTTTGCCTACCAGGTTGGT+TGG | + | chr4.4:8498002-8498021 | MS.gene28451:intron | 45.0% |
| !! | TTAAATAGTATAAATTTATA+CGG | + | chr4.4:8498046-8498065 | MS.gene28451:intron | 5.0% |
| AAACTAAGGACCCGGTTGGT+TGG | - | chr4.4:8500769-8500788 | None:intergenic | 50.0% | |
| AAGATCGTTCACGGTGCTCA+CGG | - | chr4.4:8496347-8496366 | None:intergenic | 50.0% | |
| ACTTCTCGGGCAACCTGTAA+TGG | + | chr4.4:8499406-8499425 | MS.gene28451:CDS | 50.0% | |
| AGAGAGAAAAGGAGAGGGAG+AGG | + | chr4.4:8496466-8496485 | MS.gene28451:intron | 50.0% | |
| AGAGAGAGGTGGGAGAGATA+AGG | + | chr4.4:8496431-8496450 | MS.gene28451:intron | 50.0% | |
| AGGAGAAAGAGAGACCAAGG+AGG | + | chr4.4:8496565-8496584 | MS.gene28451:intron | 50.0% | |
| AGGTGGGAGAGATAAGGAGA+GGG | + | chr4.4:8496437-8496456 | MS.gene28451:intron | 50.0% | |
| AGTAGGACCATATGGAGCAG+TGG | + | chr4.4:8499490-8499509 | MS.gene28451:CDS | 50.0% | |
| ATGGATCTCAGTACCTCTCG+AGG | + | chr4.4:8497589-8497608 | MS.gene28451:intron | 50.0% | |
| CATCAAACTCCCTGTCGTTC+AGG | - | chr4.4:8500418-8500437 | None:intergenic | 50.0% | |
| CATTACTCCCTCCGAAGACT+GGG | + | chr4.4:8497774-8497793 | MS.gene28451:intron | 50.0% | |
| CCAGATTATCCTGGTATCCC+TGG | - | chr4.4:8497634-8497653 | None:intergenic | 50.0% | |
| CCAGGGATACCAGGATAATC+TGG | + | chr4.4:8497631-8497650 | MS.gene28451:intron | 50.0% | |
| CCATGTAGCCAACCCTACTT+AGG | + | chr4.4:8497309-8497328 | MS.gene28451:intron | 50.0% | |
| CGCTCTTGAGTGGGCATTTA+AGG | - | chr4.4:8500974-8500993 | None:intergenic | 50.0% | |
| CTCTCTGGCCAACTACTTCT+CGG | + | chr4.4:8499392-8499411 | MS.gene28451:CDS | 50.0% | |
| CTTCCTCTTGACATGGAGAC+GGG | + | chr4.4:8499893-8499912 | MS.gene28451:CDS | 50.0% | |
| GAGAAAGAGAGGGAGAAGGA+CGG | + | chr4.4:8496408-8496427 | MS.gene28451:intron | 50.0% | |
| GAGAGATGTCCGTCTGATCA+TGG | + | chr4.4:8498496-8498515 | MS.gene28451:CDS | 50.0% | |
| GAGGGATAGGGAGAGAGAAA+AGG | + | chr4.4:8496455-8496474 | MS.gene28451:intron | 50.0% | |
| GCAGGGATGTGTAACTCACT+TGG | + | chr4.4:8497060-8497079 | MS.gene28451:intron | 50.0% | |
| GCATAAGCAACGCTCTTGAG+TGG | - | chr4.4:8500984-8501003 | None:intergenic | 50.0% | |
| GCTGTCCAGAGTTCGAATCT+TGG | + | chr4.4:8497087-8497106 | MS.gene28451:intron | 50.0% | |
| GGAAATTGGAGATTGCTGGC+AGG | + | chr4.4:8500071-8500090 | MS.gene28451:CDS | 50.0% | |
| GGAACGGGAGAGAAGAGATA+AGG | + | chr4.4:8496509-8496528 | MS.gene28451:intron | 50.0% | |
| GGAGAGATAAGGAGAGGGAT+AGG | + | chr4.4:8496442-8496461 | MS.gene28451:intron | 50.0% | |
| GGGAGAGGAGAGATAAGGAA+AGG | + | chr4.4:8496481-8496500 | MS.gene28451:intron | 50.0% | |
| GGGCCTGAAAAGTGAAAGTG+CGG | - | chr4.4:8500814-8500833 | None:intergenic | 50.0% | |
| GTAGGATGGTTACCCACTAC+TGG | - | chr4.4:8498955-8498974 | None:intergenic | 50.0% | |
| GTGTGCGTGCGTGCAAATAA+AGG | - | chr4.4:8499022-8499041 | None:intergenic | 50.0% | |
| GTTCTTCTCGAAAGCTGGCA+AGG | + | chr4.4:8498171-8498190 | MS.gene28451:CDS | 50.0% | |
| TCATTACTCCCTCCGAAGAC+TGG | + | chr4.4:8497773-8497792 | MS.gene28451:intron | 50.0% | |
| TCTCTGGCCAACTACTTCTC+GGG | + | chr4.4:8499393-8499412 | MS.gene28451:CDS | 50.0% | |
| TGATGCGATGTCAGTGCCAA+TGG | + | chr4.4:8499361-8499380 | MS.gene28451:CDS | 50.0% | |
| TGGATCTCAGTACCTCTCGA+GGG | + | chr4.4:8497590-8497609 | MS.gene28451:intron | 50.0% | |
| TGTGCCAACTGTGAATGGGT+CGG | + | chr4.4:8501111-8501130 | MS.gene28451:CDS | 50.0% | |
| TTATCCTGGTATCCCTGGTC+GGG | - | chr4.4:8497629-8497648 | None:intergenic | 50.0% | |
| ! | ACATGAGATGGTTTGCACGC+AGG | + | chr4.4:8501662-8501681 | MS.gene28451:CDS | 50.0% |
| ! | ACGGGCTGAGAGAGAAAAAG+AGG | + | chr4.4:8496545-8496564 | MS.gene28451:intron | 50.0% |
| ! | AGCATGCCTTTTGGCAATCC+AGG | + | chr4.4:8501154-8501173 | MS.gene28451:CDS | 50.0% |
| ! | AGTCTCTCACGTTGGTGTCT+AGG | + | chr4.4:8498888-8498907 | MS.gene28451:intron | 50.0% |
| ! | CATGCAGCCCCCTTATTTGT+AGG | - | chr4.4:8498389-8498408 | None:intergenic | 50.0% |
| ! | CCCCCTTATTTGTAGGAACG+TGG | - | chr4.4:8498382-8498401 | None:intergenic | 50.0% |
| ! | TGTGTTGGTAGAACTGACGC+GGG | - | chr4.4:8501187-8501206 | None:intergenic | 50.0% |
| !! | ATTCCTACTGGTTCTGCCAC+AGG | - | chr4.4:8501223-8501242 | None:intergenic | 50.0% |
| !! | CCTAAGTAGGGTTGGCTACA+TGG | - | chr4.4:8497312-8497331 | None:intergenic | 50.0% |
| !! | CGACGAGAATGGCTCTAAGA+AGG | + | chr4.4:8496290-8496309 | MS.gene28451:CDS | 50.0% |
| !! | CTGGTACTGACATTCCCACA+AGG | + | chr4.4:8501013-8501032 | MS.gene28451:CDS | 50.0% |
| !! | CTTTTCAGGCCCCTTTCTGT+TGG | + | chr4.4:8500822-8500841 | MS.gene28451:intron | 50.0% |
| !! | GCTCTAAGAAGGATCGCGAT+AGG | + | chr4.4:8496301-8496320 | MS.gene28451:CDS | 50.0% |
| !! | TCATCACAAACCTCGGTGCT+TGG | - | chr4.4:8501283-8501302 | None:intergenic | 50.0% |
| !! | TTCCTACTGGTTCTGCCACA+GGG | - | chr4.4:8501222-8501241 | None:intergenic | 50.0% |
| AACCTGAGGCAGACCCAGAA+AGG | + | chr4.4:8497966-8497985 | MS.gene28451:CDS | 55.0% | |
| AACGATCTTCCGGTCGTCAC+CGG | + | chr4.4:8496358-8496377 | MS.gene28451:intron | 55.0% | |
| ACAAGTCATGCCTACCCCTG+TGG | + | chr4.4:8501204-8501223 | MS.gene28451:CDS | 55.0% | |
| ACCTGAGGCAGACCCAGAAA+GGG | + | chr4.4:8497967-8497986 | MS.gene28451:CDS | 55.0% | |
| ACTGACGCGGGTATAACACC+TGG | - | chr4.4:8501175-8501194 | None:intergenic | 55.0% | |
| AGAAGGACGGAGAGAGAGGT+GGG | + | chr4.4:8496421-8496440 | MS.gene28451:intron | 55.0% | |
| AGGCAACCAACCAACCTGGT+AGG | - | chr4.4:8498011-8498030 | None:intergenic | 55.0% | |
| AGTCGTCCTGAGAGAGACAG+AGG | + | chr4.4:8496594-8496613 | MS.gene28451:intron | 55.0% | |
| ATGGAGACGGGACACTGCAA+GGG | + | chr4.4:8499905-8499924 | MS.gene28451:CDS | 55.0% | |
| ATGGAGGCAACCAACCAACC+TGG | - | chr4.4:8498015-8498034 | None:intergenic | 55.0% | |
| CACTCGCTGGGAATTCCTAC+TGG | - | chr4.4:8501235-8501254 | None:intergenic | 55.0% | |
| CAGGTTGCCCGAGAAGTAGT+TGG | - | chr4.4:8499403-8499422 | None:intergenic | 55.0% | |
| CCAAATTGGCGCCCAGTCTT+CGG | - | chr4.4:8497788-8497807 | None:intergenic | 55.0% | |
| CCAATGGCAATTGCGCTCTC+TGG | + | chr4.4:8499377-8499396 | MS.gene28451:CDS | 55.0% | |
| CGAGTACTTGGAGAAGACGG+TGG | + | chr4.4:8496119-8496138 | MS.gene28451:CDS | 55.0% | |
| GACGACCGGAAGATCGTTCA+CGG | - | chr4.4:8496356-8496375 | None:intergenic | 55.0% | |
| GACTGAGGCTAATCTCCGAG+AGG | + | chr4.4:8499550-8499569 | MS.gene28451:CDS | 55.0% | |
| GAGAGGACTTACCGGAAGCA+CGG | + | chr4.4:8496207-8496226 | MS.gene28451:CDS | 55.0% | |
| GAGGTGGGAGAGATAAGGAG+AGG | + | chr4.4:8496436-8496455 | MS.gene28451:intron | 55.0% | |
| GCTGCTGCAGTAGGACCATA+TGG | + | chr4.4:8499482-8499501 | MS.gene28451:CDS | 55.0% | |
| GGAACCGACCCATTCACAGT+TGG | - | chr4.4:8501118-8501137 | None:intergenic | 55.0% | |
| GGACGACTCATACTCCTCCT+TGG | - | chr4.4:8496582-8496601 | None:intergenic | 55.0% | |
| GGAGAGGGAGAGGAGAGATA+AGG | + | chr4.4:8496476-8496495 | MS.gene28451:intron | 55.0% | |
| GGCACACCAATGCTGCAGTT+GGG | - | chr4.4:8501097-8501116 | None:intergenic | 55.0% | |
| GTACTTGGAGAAGACGGTGG+AGG | + | chr4.4:8496122-8496141 | MS.gene28451:CDS | 55.0% | |
| GTGCTTCCGGTAAGTCCTCT+CGG | - | chr4.4:8496208-8496227 | None:intergenic | 55.0% | |
| TGGCACACCAATGCTGCAGT+TGG | - | chr4.4:8501098-8501117 | None:intergenic | 55.0% | |
| TGTCCCGTCTCCATGTCAAG+AGG | - | chr4.4:8499899-8499918 | None:intergenic | 55.0% | |
| ! | ACGGGACACTGCAAGGGTTT+TGG | + | chr4.4:8499911-8499930 | MS.gene28451:CDS | 55.0% |
| ! | CCAGAGAGCGCAATTGCCAT+TGG | - | chr4.4:8499380-8499399 | None:intergenic | 55.0% |
| ! | CGGGACACTGCAAGGGTTTT+GGG | + | chr4.4:8499912-8499931 | MS.gene28451:CDS | 55.0% |
| ! | GAGCACCGTGAACGATCTTC+CGG | + | chr4.4:8496348-8496367 | MS.gene28451:intron | 55.0% |
| ! | GGGGTAGGCATGACTTGTGT+TGG | - | chr4.4:8501202-8501221 | None:intergenic | 55.0% |
| !! | ACCTCTCGAGGGATTAGTCC+TGG | + | chr4.4:8497601-8497620 | MS.gene28451:intron | 55.0% |
| !! | TCCTACTGGTTCTGCCACAG+GGG | - | chr4.4:8501221-8501240 | None:intergenic | 55.0% |
| AATTGGCGCCCAGTCTTCGG+AGG | - | chr4.4:8497785-8497804 | None:intergenic | 60.0% | |
| ACCCCTGTGGCAGAACCAGT+AGG | + | chr4.4:8501217-8501236 | MS.gene28451:CDS | 60.0% | |
| ACGATCTTCCGGTCGTCACC+GGG | + | chr4.4:8496359-8496378 | MS.gene28451:intron | 60.0% | |
| AGGGAGAAGGACGGAGAGAG+AGG | + | chr4.4:8496417-8496436 | MS.gene28451:intron | 60.0% | |
| ATCTCGACGGCGGCGAAGAT+AGG | + | chr4.4:8496241-8496260 | MS.gene28451:CDS | 60.0% | |
| ATTAGTCCTGGCTCCCGACC+AGG | + | chr4.4:8497613-8497632 | MS.gene28451:intron | 60.0% | |
| ATTGGCGCCCAGTCTTCGGA+GGG | - | chr4.4:8497784-8497803 | None:intergenic | 60.0% | |
| CATGGAGACGGGACACTGCA+AGG | + | chr4.4:8499904-8499923 | MS.gene28451:CDS | 60.0% | |
| CCGAAGACTGGGCGCCAATT+TGG | + | chr4.4:8497785-8497804 | MS.gene28451:intron | 60.0% | |
| CGCTCTCCTCTGTCTCTCTC+AGG | - | chr4.4:8496603-8496622 | None:intergenic | 60.0% | |
| CTCTCTCTCCGTCTCTCTCC+CGG | - | chr4.4:8496380-8496399 | None:intergenic | 60.0% | |
| GAAGACGGTGGAGGAGCAAC+CGG | + | chr4.4:8496131-8496150 | MS.gene28451:CDS | 60.0% | |
| GAGAAGGACGGAGAGAGAGG+TGG | + | chr4.4:8496420-8496439 | MS.gene28451:intron | 60.0% | |
| GATGGGGTGGTGTGTGTGTG+TGG | - | chr4.4:8498845-8498864 | None:intergenic | 60.0% | |
| GCCAGGACTAATCCCTCGAG+AGG | - | chr4.4:8497605-8497624 | None:intergenic | 60.0% | |
| GCGAAGATAGGCGGAGCAAG+AGG | + | chr4.4:8496253-8496272 | MS.gene28451:CDS | 60.0% | |
| GGAGGAGCAACCGGAAGACA+AGG | + | chr4.4:8496140-8496159 | MS.gene28451:CDS | 60.0% | |
| GGGTGGTGTGTGTGTGTGGA+GGG | - | chr4.4:8498841-8498860 | None:intergenic | 60.0% | |
| GGTGCTCACGGTCACGTTCA+CGG | - | chr4.4:8496335-8496354 | None:intergenic | 60.0% | |
| GGTGGTGTGTGTGTGTGGAG+GGG | - | chr4.4:8498840-8498859 | None:intergenic | 60.0% | |
| TCCAGTGGAGCTGCTGCAGT+AGG | + | chr4.4:8499473-8499492 | MS.gene28451:CDS | 60.0% | |
| TCCCTTTCTGGGTCTGCCTC+AGG | - | chr4.4:8497971-8497990 | None:intergenic | 60.0% | |
| TCCTACTGCAGCAGCTCCAC+TGG | - | chr4.4:8499477-8499496 | None:intergenic | 60.0% | |
| TTAGTCCTGGCTCCCGACCA+GGG | + | chr4.4:8497614-8497633 | MS.gene28451:intron | 60.0% | |
| ! | TGGGTCGGTTCCTGTTCAGC+AGG | + | chr4.4:8501126-8501145 | MS.gene28451:CDS | 60.0% |
| !! | ACTGGTTCTGCCACAGGGGT+AGG | - | chr4.4:8501217-8501236 | None:intergenic | 60.0% |
| AGGCGGAGCAAGAGGTCACG+CGG | + | chr4.4:8496261-8496280 | MS.gene28451:CDS | 65.0% | |
| CGGGAGAGAGACGGAGAGAG+AGG | + | chr4.4:8496378-8496397 | MS.gene28451:intron | 65.0% | |
| GGGGTGGTGTGTGTGTGTGG+AGG | - | chr4.4:8498842-8498861 | None:intergenic | 65.0% | |
| GGTCGTCACCGGGAGAGAGA+CGG | + | chr4.4:8496369-8496388 | MS.gene28451:intron | 65.0% | |
| GGTGTGTGTGTGTGGAGGGG+AGG | - | chr4.4:8498837-8498856 | None:intergenic | 65.0% | |
| GTCTCTCTCCCGGTGACGAC+CGG | - | chr4.4:8496370-8496389 | None:intergenic | 65.0% | |
| TCGACGGCGGCGAAGATAGG+CGG | + | chr4.4:8496244-8496263 | MS.gene28451:CDS | 65.0% | |
| CGCGGCGGAGACGACGAGAA+TGG | + | chr4.4:8496279-8496298 | MS.gene28451:CDS | 70.0% | |
| CGGAGCAAGAGGTCACGCGG+CGG | + | chr4.4:8496264-8496283 | MS.gene28451:CDS | 70.0% | |
| GCCGACGACGATCTCGACGG+CGG | + | chr4.4:8496231-8496250 | MS.gene28451:CDS | 70.0% | |
| GCCGCCGTCGAGATCGTCGT+CGG | - | chr4.4:8496235-8496254 | None:intergenic | 70.0% | |
| GGCTCCCGACCAGGGATACC+AGG | + | chr4.4:8497622-8497641 | MS.gene28451:intron | 70.0% | |
| GGTATCCCTGGTCGGGAGCC+AGG | - | chr4.4:8497622-8497641 | None:intergenic | 70.0% | |
| !! | GGCGCCGACGACGATCTCGA+CGG | + | chr4.4:8496228-8496247 | MS.gene28451:CDS | 70.0% |
| CGTCGTCGGCGCCGTGCTTC+CGG | - | chr4.4:8496221-8496240 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 8496102 | 8502197 | 8496102 | ID=MS.gene28451 |
| chr4.4 | mRNA | 8496102 | 8502197 | 8496102 | ID=MS.gene28451.t1;Parent=MS.gene28451 |
| chr4.4 | exon | 8496102 | 8496354 | 8496102 | ID=MS.gene28451.t1.exon1;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8496102 | 8496354 | 8496102 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8497547 | 8497571 | 8497547 | ID=MS.gene28451.t1.exon2;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8497547 | 8497571 | 8497547 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8497937 | 8498015 | 8497937 | ID=MS.gene28451.t1.exon3;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8497937 | 8498015 | 8497937 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8498136 | 8498192 | 8498136 | ID=MS.gene28451.t1.exon4;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8498136 | 8498192 | 8498136 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8498494 | 8498549 | 8498494 | ID=MS.gene28451.t1.exon5;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8498494 | 8498549 | 8498494 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8499346 | 8499571 | 8499346 | ID=MS.gene28451.t1.exon6;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8499346 | 8499571 | 8499346 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8499857 | 8499943 | 8499857 | ID=MS.gene28451.t1.exon7;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8499857 | 8499943 | 8499857 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8500028 | 8500102 | 8500028 | ID=MS.gene28451.t1.exon8;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8500028 | 8500102 | 8500028 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8500196 | 8500276 | 8500196 | ID=MS.gene28451.t1.exon9;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8500196 | 8500276 | 8500196 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8500970 | 8501034 | 8500970 | ID=MS.gene28451.t1.exon10;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8500970 | 8501034 | 8500970 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8501105 | 8501291 | 8501105 | ID=MS.gene28451.t1.exon11;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8501105 | 8501291 | 8501105 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8501381 | 8501469 | 8501381 | ID=MS.gene28451.t1.exon12;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8501381 | 8501469 | 8501381 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8501591 | 8501705 | 8501591 | ID=MS.gene28451.t1.exon13;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8501591 | 8501705 | 8501591 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| chr4.4 | exon | 8502156 | 8502197 | 8502156 | ID=MS.gene28451.t1.exon14;Parent=MS.gene28451.t1 |
| chr4.4 | CDS | 8502156 | 8502197 | 8502156 | ID=cds.MS.gene28451.t1;Parent=MS.gene28451.t1 |
| Gene Sequence |
| Protein sequence |
