Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28534.t1 | XP_013446450.1 | 97.3 | 939 | 25 | 0 | 1 | 939 | 1 | 939 | 0.00E+00 | 1814.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28534.t1 | Q8LGM7 | 25.6 | 348 | 206 | 10 | 109 | 425 | 2 | 327 | 3.3e-18 | 95.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28534.t1 | A0A072TST6 | 97.3 | 939 | 25 | 0 | 1 | 939 | 1 | 939 | 0.0e+00 | 1814.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050213 | MS.gene28534 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene050257 | MS.gene28534 | 0.82788 | 1.23E-54 | -1.69E-46 |
| MS.gene050258 | MS.gene28534 | 0.811585 | 6.50E-51 | -1.69E-46 |
| MS.gene050348 | MS.gene28534 | 0.812953 | 3.27E-51 | -1.69E-46 |
| MS.gene051835 | MS.gene28534 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene056519 | MS.gene28534 | 0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene28534 | 0.812613 | 3.88E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28534.t1 | MTR_8g079020 | 97.338 | 939 | 25 | 0 | 1 | 939 | 1 | 939 | 0.0 | 1891 |
| MS.gene28534.t1 | MTR_8g079040 | 91.161 | 939 | 79 | 1 | 1 | 939 | 1 | 935 | 0.0 | 1745 |
| MS.gene28534.t1 | MTR_1g101790 | 46.828 | 331 | 147 | 5 | 95 | 400 | 50 | 376 | 6.01e-88 | 295 |
| MS.gene28534.t1 | MTR_1g101790 | 47.093 | 172 | 83 | 4 | 756 | 925 | 461 | 626 | 6.89e-34 | 139 |
| MS.gene28534.t1 | MTR_1g101790 | 46.828 | 331 | 147 | 5 | 95 | 400 | 50 | 376 | 1.48e-87 | 294 |
| MS.gene28534.t1 | MTR_1g101790 | 47.093 | 172 | 83 | 4 | 756 | 925 | 461 | 626 | 7.73e-34 | 139 |
| MS.gene28534.t1 | MTR_6g089580 | 46.057 | 317 | 145 | 5 | 104 | 400 | 61 | 371 | 5.77e-80 | 272 |
| MS.gene28534.t1 | MTR_6g089580 | 41.477 | 176 | 79 | 3 | 755 | 925 | 455 | 611 | 2.49e-32 | 134 |
| MS.gene28534.t1 | MTR_6g464840 | 45.741 | 317 | 146 | 5 | 104 | 400 | 61 | 371 | 7.62e-79 | 269 |
| MS.gene28534.t1 | MTR_6g464840 | 42.614 | 176 | 77 | 3 | 755 | 925 | 455 | 611 | 7.49e-33 | 136 |
| MS.gene28534.t1 | MTR_4g102620 | 37.846 | 325 | 180 | 6 | 95 | 401 | 50 | 370 | 2.82e-71 | 248 |
| MS.gene28534.t1 | MTR_4g102620 | 43.605 | 172 | 93 | 3 | 755 | 925 | 430 | 598 | 3.80e-34 | 140 |
| MS.gene28534.t1 | MTR_3g099200 | 30.693 | 202 | 123 | 5 | 181 | 377 | 166 | 355 | 1.93e-18 | 88.6 |
| MS.gene28534.t1 | MTR_3g099200 | 30.693 | 202 | 123 | 5 | 181 | 377 | 119 | 308 | 1.99e-18 | 87.8 |
| MS.gene28534.t1 | MTR_4g102890 | 27.919 | 197 | 130 | 5 | 181 | 377 | 76 | 260 | 9.23e-17 | 82.0 |
| MS.gene28534.t1 | MTR_4g102890 | 27.919 | 197 | 130 | 5 | 181 | 377 | 111 | 295 | 1.39e-16 | 82.0 |
| MS.gene28534.t1 | MTR_4g102890 | 27.919 | 197 | 130 | 5 | 181 | 377 | 159 | 343 | 2.13e-16 | 82.4 |
| MS.gene28534.t1 | MTR_4g104060 | 30.055 | 183 | 114 | 6 | 202 | 384 | 178 | 346 | 1.09e-15 | 80.1 |
| MS.gene28534.t1 | MTR_4g104060 | 30.055 | 183 | 114 | 6 | 202 | 384 | 164 | 332 | 1.30e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28534.t1 | AT2G23520 | 65.612 | 948 | 252 | 20 | 1 | 935 | 1 | 887 | 0.0 | 1170 |
| MS.gene28534.t1 | AT4G37100 | 64.921 | 955 | 242 | 25 | 1 | 933 | 1 | 884 | 0.0 | 1152 |
| MS.gene28534.t1 | AT5G66950 | 63.953 | 946 | 247 | 23 | 1 | 935 | 1 | 863 | 0.0 | 1097 |
| MS.gene28534.t1 | AT5G51920 | 44.479 | 326 | 163 | 4 | 89 | 399 | 46 | 368 | 6.45e-89 | 295 |
| MS.gene28534.t1 | AT5G51920 | 41.951 | 205 | 91 | 6 | 721 | 925 | 374 | 550 | 2.38e-30 | 127 |
| MS.gene28534.t1 | AT4G22980 | 40.753 | 292 | 158 | 4 | 104 | 386 | 52 | 337 | 6.37e-62 | 220 |
| MS.gene28534.t1 | AT4G22980 | 33.918 | 171 | 89 | 3 | 756 | 925 | 398 | 545 | 1.21e-19 | 94.4 |
| MS.gene28534.t1 | AT1G16540 | 24.834 | 302 | 178 | 12 | 131 | 397 | 19 | 306 | 1.59e-15 | 82.0 |
| MS.gene28534.t1 | AT1G16540 | 24.834 | 302 | 178 | 12 | 131 | 397 | 19 | 306 | 2.30e-15 | 81.3 |
| MS.gene28534.t1 | AT1G16540 | 24.834 | 302 | 178 | 12 | 131 | 397 | 19 | 306 | 2.79e-15 | 81.3 |
Find 260 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCCTCTTCTTCTTAT+TGG | 0.081557 | 8.4:-27773646 | None:intergenic |
| TTGAGTAACCATGCACTTTA+TGG | 0.165216 | 8.4:+27773324 | MS.gene28534:CDS |
| GTTCATCATTATTCGTTTAA+TGG | 0.172048 | 8.4:+27774575 | MS.gene28534:CDS |
| CATAGGACTGCCATACATTT+TGG | 0.174002 | 8.4:-27774423 | None:intergenic |
| TCACTGTGCTTCTATGTTCT+TGG | 0.176287 | 8.4:+27772813 | MS.gene28534:CDS |
| ATTCAGATAGTCCATAATTT+TGG | 0.199149 | 8.4:-27773385 | None:intergenic |
| CATTATTCGTTTAATGGAAA+TGG | 0.236740 | 8.4:+27774581 | MS.gene28534:CDS |
| CTTCTCCCCTGCCATCATTC+TGG | 0.242288 | 8.4:+27774354 | MS.gene28534:CDS |
| AGTCATCTGACAACTCATTT+TGG | 0.253232 | 8.4:+27774267 | MS.gene28534:CDS |
| TGATATAAAGGCCAAAATTA+TGG | 0.254983 | 8.4:+27773374 | MS.gene28534:CDS |
| TGACCTGCTTCACTGGTTCC+AGG | 0.265768 | 8.4:-27774641 | None:intergenic |
| CTTGCTTGATGCTGGGTCAT+TGG | 0.271309 | 8.4:+27773773 | MS.gene28534:CDS |
| ATCACAGTTGCCTGCCTTCT+CGG | 0.273012 | 8.4:+27774094 | MS.gene28534:CDS |
| CCAGTTCAGTCTAGAGTAAC+TGG | 0.276324 | 8.4:+27773696 | MS.gene28534:CDS |
| ATGACAGCCAATCTGTTAAT+TGG | 0.278970 | 8.4:+27773523 | MS.gene28534:CDS |
| GCTTCTGATGGGGATGTAAA+AGG | 0.283032 | 8.4:+27775163 | MS.gene28534:CDS |
| GGAAACCTTGTTCATATCTA+TGG | 0.290764 | 8.4:+27775184 | MS.gene28534:CDS |
| GCTTGTTCTCTTGCAGCTTC+CGG | 0.292682 | 8.4:-27772897 | None:intergenic |
| TGGCATGTCTTGCTTGATGC+TGG | 0.293534 | 8.4:+27773765 | MS.gene28534:CDS |
| TGCACAGTGCATGGTTTAAA+TGG | 0.299405 | 8.4:+27773580 | MS.gene28534:CDS |
| TCTTCAACAGACTCTTCTTC+AGG | 0.302380 | 8.4:-27774551 | None:intergenic |
| CTTTATGGTGGTGCTGAAAA+AGG | 0.315765 | 8.4:+27773339 | MS.gene28534:CDS |
| ACTCTCTAAATCGCAGGATA+TGG | 0.315960 | 8.4:+27772957 | MS.gene28534:CDS |
| TATTCAGACCCTTCACTATT+GGG | 0.318132 | 8.4:+27773263 | MS.gene28534:CDS |
| CGACATCAAAGCTTGGAAAA+TGG | 0.320563 | 8.4:+27774719 | MS.gene28534:CDS |
| AATATTCCTGAGAATGAATA+TGG | 0.322371 | 8.4:+27773405 | MS.gene28534:CDS |
| TTATTCAGACCCTTCACTAT+TGG | 0.323089 | 8.4:+27773262 | MS.gene28534:CDS |
| CCATCTCCAAGGTTTCTCTT+AGG | 0.324960 | 8.4:-27774934 | None:intergenic |
| ATAGAAGCACAGTGAGAAAT+AGG | 0.324989 | 8.4:-27772805 | None:intergenic |
| AGCACTATATTTGAAGAAAC+TGG | 0.325792 | 8.4:+27774194 | MS.gene28534:CDS |
| TTTGGTGGTAGTAGGTTAAT+TGG | 0.325831 | 8.4:+27774839 | MS.gene28534:CDS |
| AACCCAACATTTATCATAGA+AGG | 0.334597 | 8.4:+27775544 | MS.gene28534:CDS |
| TTGCTTGATGCTGGGTCATT+GGG | 0.340499 | 8.4:+27773774 | MS.gene28534:CDS |
| TGCCTTGATTATTGTGGATT+CGG | 0.344713 | 8.4:+27773228 | MS.gene28534:CDS |
| TCCTGGTTCCCAACATTGTC+AGG | 0.348389 | 8.4:-27772982 | None:intergenic |
| TGGTAGTAGGTTAATTGGTT+TGG | 0.355193 | 8.4:+27774844 | MS.gene28534:CDS |
| TTGAAGATACAAAGCTTTGC+AGG | 0.356400 | 8.4:+27775392 | MS.gene28534:CDS |
| CTGTTGCCGCGAGAGGGTCT+TGG | 0.359918 | 8.4:+27774672 | MS.gene28534:CDS |
| TGCAGCTTCCGGAGCATTGA+CGG | 0.364934 | 8.4:-27772886 | None:intergenic |
| AACTGTTGAACATGATATAA+AGG | 0.366836 | 8.4:+27773362 | MS.gene28534:CDS |
| TGAAGTCGTCACAGCTTCAT+TGG | 0.378019 | 8.4:+27775462 | MS.gene28534:CDS |
| CTGCCATCATTCTGGTTCAA+TGG | 0.378716 | 8.4:+27774362 | MS.gene28534:CDS |
| ATCACGCCGACCGCCCTCCA+TGG | 0.380695 | 8.4:-27775416 | None:intergenic |
| AATGATGTAATTATGAAATC+TGG | 0.381354 | 8.4:-27773837 | None:intergenic |
| GATGGTTTGGACAGACTGGC+TGG | 0.382935 | 8.4:+27774011 | MS.gene28534:CDS |
| CAGCTGTGGCTTTCAACCTC+AGG | 0.386239 | 8.4:+27775233 | MS.gene28534:CDS |
| GATCTAGTTCTTGTGACATT+AGG | 0.392142 | 8.4:-27774514 | None:intergenic |
| GGGTATGATCCCACAGGCTT+TGG | 0.397097 | 8.4:+27773873 | MS.gene28534:CDS |
| CGGAGAGAAGGGAATCGATT+TGG | 0.398983 | 8.4:+27774821 | MS.gene28534:CDS |
| TCCATTCTGACCTGCTTCAC+TGG | 0.403753 | 8.4:-27774648 | None:intergenic |
| TTTCTCTGAGGACAGATACT+TGG | 0.403800 | 8.4:-27773157 | None:intergenic |
| CCAGTTACTCTAGACTGAAC+TGG | 0.404121 | 8.4:-27773696 | None:intergenic |
| TGCCATCATTCTGGTTCAAT+GGG | 0.409075 | 8.4:+27774363 | MS.gene28534:CDS |
| GCTCAATGTGCTAGGAATAA+AGG | 0.411192 | 8.4:+27773549 | MS.gene28534:CDS |
| ATTATTCGTTTAATGGAAAT+GGG | 0.413471 | 8.4:+27774582 | MS.gene28534:CDS |
| ATATGACGATGCACAGGAAT+GGG | 0.413479 | 8.4:+27775009 | MS.gene28534:CDS |
| GCCAAGCGAATCCATGTCCT+TGG | 0.416288 | 8.4:-27773799 | None:intergenic |
| TTATGAAATCTGGCCTGAAA+AGG | 0.419279 | 8.4:-27773827 | None:intergenic |
| GGAATGGGGCAGGAGGGAAC+CGG | 0.420910 | 8.4:+27775024 | MS.gene28534:CDS |
| CTCAAATACACTGGAAACTC+GGG | 0.423401 | 8.4:-27773978 | None:intergenic |
| ATTCAGCCTGGCCAGCGATC+TGG | 0.425297 | 8.4:-27773022 | None:intergenic |
| TACGCATGTCAATGAGATAA+TGG | 0.425406 | 8.4:+27774613 | MS.gene28534:CDS |
| TCACAGTTGCCTGCCTTCTC+GGG | 0.426298 | 8.4:+27774095 | MS.gene28534:CDS |
| CGTTGGCACAGCAGAACAAC+TGG | 0.430994 | 8.4:+27773745 | MS.gene28534:CDS |
| CTTGAAGAAGCTTCAGAAGA+TGG | 0.433655 | 8.4:+27772931 | MS.gene28534:CDS |
| AGATGTATTTGAAACTGAAA+TGG | 0.434662 | 8.4:+27774142 | MS.gene28534:CDS |
| CAAAATCAGTCCGGGAGTAC+CGG | 0.434676 | 8.4:+27773933 | MS.gene28534:CDS |
| TAAAAGAGAGTGCTATAAGA+AGG | 0.439629 | 8.4:+27774768 | MS.gene28534:CDS |
| ATCTCCCAATGCTGGCATCC+TGG | 0.442000 | 8.4:-27772999 | None:intergenic |
| ATGTCTACTTATCAAGAAAT+CGG | 0.445588 | 8.4:+27773896 | MS.gene28534:CDS |
| GGAGATCCAGATCGCTGGCC+AGG | 0.447692 | 8.4:+27773016 | MS.gene28534:CDS |
| TATGAAATCTGGCCTGAAAA+GGG | 0.448995 | 8.4:-27773826 | None:intergenic |
| GTCATATTCTCCGTCACTGC+TGG | 0.449100 | 8.4:-27774993 | None:intergenic |
| CCACCTTCTATGATAAATGT+TGG | 0.451450 | 8.4:-27775547 | None:intergenic |
| CTCACGCTGCGCATTCAGCC+TGG | 0.453575 | 8.4:-27773034 | None:intergenic |
| CTTCAACAGACTCTTCTTCA+GGG | 0.453803 | 8.4:-27774550 | None:intergenic |
| ACAAGGCCATATTCATTCTC+AGG | 0.455119 | 8.4:-27773411 | None:intergenic |
| CCAAGCGAATCCATGTCCTT+GGG | 0.455175 | 8.4:-27773798 | None:intergenic |
| GGCGGTCGGCGTGATGGAAA+AGG | 0.457200 | 8.4:+27775424 | MS.gene28534:CDS |
| CCCAAGGACATGGATTCGCT+TGG | 0.458261 | 8.4:+27773798 | MS.gene28534:CDS |
| CACCTTCTATGATAAATGTT+GGG | 0.458642 | 8.4:-27775546 | None:intergenic |
| GAAGTCGTCACAGCTTCATT+GGG | 0.458704 | 8.4:+27775463 | MS.gene28534:CDS |
| GAGTGACTCTGTGGATGGTT+TGG | 0.458928 | 8.4:+27773998 | MS.gene28534:CDS |
| AAACCTTCTTCCAAAATGTA+TGG | 0.458956 | 8.4:+27774413 | MS.gene28534:CDS |
| GAGCCATCCAATTAACAGAT+TGG | 0.459478 | 8.4:-27773530 | None:intergenic |
| TTCTATGTTCTTGGACAAGA+AGG | 0.460966 | 8.4:+27772822 | MS.gene28534:CDS |
| CAGTCCGGGAGTACCGGGTC+AGG | 0.460966 | 8.4:+27773939 | MS.gene28534:CDS |
| GGGAAACTGAAGGTGAGTTT+AGG | 0.461385 | 8.4:+27774789 | MS.gene28534:CDS |
| GGAATCGATTTGGTGGTAGT+AGG | 0.462577 | 8.4:+27774831 | MS.gene28534:CDS |
| ATATGGAACCTGACAATGTT+GGG | 0.464882 | 8.4:+27772974 | MS.gene28534:CDS |
| TGAAGGTGAGTTTAGGCTGT+TGG | 0.469862 | 8.4:+27774796 | MS.gene28534:CDS |
| TCAACCTCAGGGACAGAAGA+AGG | 0.475171 | 8.4:+27775245 | MS.gene28534:CDS |
| ATCGATCATGTTGATATGCT+TGG | 0.480423 | 8.4:+27775064 | MS.gene28534:CDS |
| GTCATTGGGCCCCAAGGACA+TGG | 0.486868 | 8.4:+27773788 | MS.gene28534:CDS |
| ACAATAATCAAGGCATACCT+TGG | 0.488168 | 8.4:-27773220 | None:intergenic |
| GGCTGTTGGGTCGGAGAGAA+GGG | 0.488236 | 8.4:+27774810 | MS.gene28534:CDS |
| ATAAAACTACGCTTAGACTT+CGG | 0.489225 | 8.4:+27775092 | MS.gene28534:CDS |
| ACTCAAATACACTGGAAACT+CGG | 0.489747 | 8.4:-27773979 | None:intergenic |
| CCGTTCAGCTGCAAGGGCAG+TGG | 0.493154 | 8.4:-27773067 | None:intergenic |
| AAACCATGCACTGTGCACTT+TGG | 0.493836 | 8.4:-27773574 | None:intergenic |
| GGGAACCAGGATGCCAGCAT+TGG | 0.495267 | 8.4:+27772994 | MS.gene28534:CDS |
| GAACCTGGAACCAGTGAAGC+AGG | 0.496085 | 8.4:+27774638 | MS.gene28534:CDS |
| AGGAAGAAGGATTCAGCTAC+TGG | 0.497489 | 8.4:+27773660 | MS.gene28534:CDS |
| AGGCTGTTGGGTCGGAGAGA+AGG | 0.497929 | 8.4:+27774809 | MS.gene28534:CDS |
| GCAGCTTCCGGAGCATTGAC+GGG | 0.499767 | 8.4:-27772885 | None:intergenic |
| GATGAAGAAGCCAGCAGTGA+CGG | 0.500245 | 8.4:+27774983 | MS.gene28534:CDS |
| AAAGAAACCCGTCAATGCTC+CGG | 0.500996 | 8.4:+27772878 | MS.gene28534:CDS |
| TTGGAAAATGGCTCTACCTC+TGG | 0.501860 | 8.4:+27774731 | MS.gene28534:CDS |
| ATGGAAAAGGCAGCTATGTA+AGG | 0.501975 | 8.4:+27775437 | MS.gene28534:CDS |
| CATTCCTGACCCGGTACTCC+CGG | 0.503639 | 8.4:-27773943 | None:intergenic |
| GATCTGGGTCAGAGTCCAAT+GGG | 0.504308 | 8.4:+27774293 | MS.gene28534:CDS |
| GACTCGTCTTCACTGAAGAC+AGG | 0.504979 | 8.4:-27774248 | None:intergenic |
| CTAAGAGAAACCTTGGAGAT+GGG | 0.505721 | 8.4:+27774935 | MS.gene28534:CDS |
| GGCATGTCTTGCTTGATGCT+GGG | 0.506517 | 8.4:+27773766 | MS.gene28534:CDS |
| TGTGGATGGTTTGGACAGAC+TGG | 0.507140 | 8.4:+27774007 | MS.gene28534:CDS |
| CTGAAGTTATCTGCTTCTGA+TGG | 0.507579 | 8.4:+27775151 | MS.gene28534:CDS |
| AAGCTTTGCAGGCCCATGGA+GGG | 0.508202 | 8.4:+27775403 | MS.gene28534:CDS |
| CAATAAGAAGAAGAGGAAGA+AGG | 0.508632 | 8.4:+27773647 | MS.gene28534:CDS |
| CGATCTGGATCTCCCAATGC+TGG | 0.508788 | 8.4:-27773007 | None:intergenic |
| GGAACCAGGATGCCAGCATT+GGG | 0.508842 | 8.4:+27772995 | MS.gene28534:CDS |
| ATGGAGGGCGGTCGGCGTGA+TGG | 0.510612 | 8.4:+27775418 | MS.gene28534:CDS |
| GAAGGTGAGTTTAGGCTGTT+GGG | 0.510903 | 8.4:+27774797 | MS.gene28534:CDS |
| AAAAGAGAGTGCTATAAGAA+GGG | 0.511350 | 8.4:+27774769 | MS.gene28534:CDS |
| GAAGGAATCTCTCTTGGCAT+TGG | 0.515492 | 8.4:+27775310 | MS.gene28534:CDS |
| TCACGCCGACCGCCCTCCAT+GGG | 0.516274 | 8.4:-27775415 | None:intergenic |
| GCAAGCCTTCAAAATCAGTC+CGG | 0.517985 | 8.4:+27773924 | MS.gene28534:CDS |
| ACCAGTGAAGCAGGTCAGAA+TGG | 0.518505 | 8.4:+27774647 | MS.gene28534:CDS |
| ACCTGACAATGTTGGGAACC+AGG | 0.519763 | 8.4:+27772981 | MS.gene28534:CDS |
| AGAGCACCTAAGAGAAACCT+TGG | 0.520579 | 8.4:+27774928 | MS.gene28534:CDS |
| GACCGAATCCACAATAATCA+AGG | 0.522066 | 8.4:-27773230 | None:intergenic |
| AATATGACGATGCACAGGAA+TGG | 0.524077 | 8.4:+27775008 | MS.gene28534:CDS |
| TGAAGTTATCTGCTTCTGAT+GGG | 0.528156 | 8.4:+27775152 | MS.gene28534:CDS |
| TCTTGCTCGACATCAAAGCT+TGG | 0.528454 | 8.4:+27774712 | MS.gene28534:CDS |
| TTCTCTGAGGACAGATACTT+GGG | 0.531057 | 8.4:-27773156 | None:intergenic |
| AATTAACAGATTGGCTGTCA+TGG | 0.533116 | 8.4:-27773521 | None:intergenic |
| AAAATCAGTCCGGGAGTACC+GGG | 0.533676 | 8.4:+27773934 | MS.gene28534:CDS |
| AAGAAGAGTGTCGTTTAGCA+TGG | 0.534317 | 8.4:+27774892 | MS.gene28534:CDS |
| CAACCTCAGGGACAGAAGAA+GGG | 0.535054 | 8.4:+27775246 | MS.gene28534:CDS |
| CAGTTCAGTCTAGAGTAACT+GGG | 0.535079 | 8.4:+27773697 | MS.gene28534:CDS |
| CGGGAGTACCGGGTCAGGAA+TGG | 0.537402 | 8.4:+27773944 | MS.gene28534:CDS |
| ATATTTCGACATACTATCTC+CGG | 0.537722 | 8.4:-27775043 | None:intergenic |
| CCTAAGAGAAACCTTGGAGA+TGG | 0.537982 | 8.4:+27774934 | MS.gene28534:CDS |
| TGCTGGGTCATTGGGCCCCA+AGG | 0.538142 | 8.4:+27773782 | MS.gene28534:CDS |
| ATGCACAGGAATGGGGCAGG+AGG | 0.539018 | 8.4:+27775017 | MS.gene28534:CDS |
| CTGAAGACGATGAATTCGAT+GGG | 0.539571 | 8.4:+27774036 | MS.gene28534:CDS |
| AAAATGCTTCTTCGAGGCTG+AGG | 0.540150 | 8.4:-27773113 | None:intergenic |
| GAGGCTGAGGATGTCTTCCT+CGG | 0.541585 | 8.4:-27773100 | None:intergenic |
| TACAAAGCTTTGCAGGCCCA+TGG | 0.544332 | 8.4:+27775399 | MS.gene28534:CDS |
| CTCCCATTGAACCAGAATGA+TGG | 0.544364 | 8.4:-27774365 | None:intergenic |
| CATTGAACCAGAATGATGGC+AGG | 0.545250 | 8.4:-27774361 | None:intergenic |
| ATTGGATGGCTCAATGTGCT+AGG | 0.546546 | 8.4:+27773541 | MS.gene28534:CDS |
| TGGAGTACTCTCTAAATCGC+AGG | 0.547462 | 8.4:+27772951 | MS.gene28534:CDS |
| GAAACTGGAAGTATATCTGT+TGG | 0.547606 | 8.4:+27774209 | MS.gene28534:CDS |
| GACAAGAAGGGTAGGAGGAA+AGG | 0.549856 | 8.4:+27772835 | MS.gene28534:CDS |
| CCACTGCCCTTGCAGCTGAA+CGG | 0.550761 | 8.4:+27773067 | MS.gene28534:CDS |
| GTCGAGCAAAGTTTGAGAGT+TGG | 0.552694 | 8.4:-27773603 | None:intergenic |
| AAGGTATGCCTTGATTATTG+TGG | 0.554075 | 8.4:+27773222 | MS.gene28534:CDS |
| ACATGGAAAATGCTTCTTCG+AGG | 0.554254 | 8.4:-27773119 | None:intergenic |
| AACTGTGATCCCTGGTGGCG+AGG | 0.554406 | 8.4:-27774080 | None:intergenic |
| CAGCACCACCATAAAGTGCA+TGG | 0.554753 | 8.4:-27773332 | None:intergenic |
| CCTGCATAGTCTGACCCCAT+TGG | 0.554927 | 8.4:-27774308 | None:intergenic |
| GCAGGCCCATGGAGGGCGGT+CGG | 0.555409 | 8.4:+27775410 | MS.gene28534:CDS |
| CAGCCAATCTGTTAATTGGA+TGG | 0.556187 | 8.4:+27773527 | MS.gene28534:CDS |
| CAGTTACTCTAGACTGAACT+GGG | 0.556361 | 8.4:-27773695 | None:intergenic |
| TGAGGATGTATATAAACTGT+GGG | 0.556872 | 8.4:+27775501 | MS.gene28534:CDS |
| TCAGAGCCTTCTTGAACAGT+AGG | 0.557079 | 8.4:-27775574 | None:intergenic |
| ATGGATCTGTTGCCGCGAGA+GGG | 0.557696 | 8.4:+27774666 | MS.gene28534:CDS |
| TATTTGAGTGACTCTGTGGA+TGG | 0.562262 | 8.4:+27773993 | MS.gene28534:CDS |
| GCTGTGCCAACGCCATCCAC+TGG | 0.563448 | 8.4:-27773734 | None:intergenic |
| GATGACGAGCACAATGGTCG+AGG | 0.563513 | 8.4:+27774869 | MS.gene28534:CDS |
| CAAACGTCCGTTCAGCTGCA+AGG | 0.565660 | 8.4:-27773074 | None:intergenic |
| CATGACAGCTCTGAAAGAGA+TGG | 0.566714 | 8.4:+27774167 | MS.gene28534:CDS |
| AGAGAAGGGAATCGATTTGG+TGG | 0.567570 | 8.4:+27774824 | MS.gene28534:CDS |
| AGGCAGGCAACTGTGATCCC+TGG | 0.569001 | 8.4:-27774088 | None:intergenic |
| AGATCTGGGTCAGAGTCCAA+TGG | 0.570821 | 8.4:+27774292 | MS.gene28534:CDS |
| TGAACGGACGTTTGAGTCCG+AGG | 0.573774 | 8.4:+27773083 | MS.gene28534:CDS |
| AACCTCAGGGACAGAAGAAG+GGG | 0.573794 | 8.4:+27775247 | MS.gene28534:CDS |
| CAATAATCAAGGCATACCTT+GGG | 0.573994 | 8.4:-27773219 | None:intergenic |
| AAACGTCCGTTCAGCTGCAA+GGG | 0.575175 | 8.4:-27773073 | None:intergenic |
| ACGATGCACAGGAATGGGGC+AGG | 0.575547 | 8.4:+27775014 | MS.gene28534:CDS |
| CAAGCCTTCAAAATCAGTCC+GGG | 0.576246 | 8.4:+27773925 | MS.gene28534:CDS |
| TTCATACCAGTGGATGGCGT+TGG | 0.576256 | 8.4:+27773728 | MS.gene28534:CDS |
| GTGTATGCACCCGAGAAGGC+AGG | 0.577153 | 8.4:-27774104 | None:intergenic |
| AAATTTCCAATAAGAAGAAG+AGG | 0.577710 | 8.4:+27773640 | MS.gene28534:CDS |
| AATCTTCACCATTCCTGACC+CGG | 0.580151 | 8.4:-27773952 | None:intergenic |
| TTGAGGATGTATATAAACTG+TGG | 0.581711 | 8.4:+27775500 | MS.gene28534:CDS |
| GATATGGAACCTGACAATGT+TGG | 0.583426 | 8.4:+27772973 | MS.gene28534:CDS |
| GTATTTGGGTATGATCCCAC+AGG | 0.586034 | 8.4:+27773867 | MS.gene28534:CDS |
| TACATGACTCCCAATAGTGA+AGG | 0.587964 | 8.4:-27773272 | None:intergenic |
| GTGCCAAAGTGCACAGTGCA+TGG | 0.588287 | 8.4:+27773571 | MS.gene28534:CDS |
| CAGAGAAAGTTGATCAGTTG+AGG | 0.588535 | 8.4:+27773172 | MS.gene28534:CDS |
| ATATTCTCATTTGCCACCCA+AGG | 0.589018 | 8.4:+27773203 | MS.gene28534:CDS |
| GACGATGAATTCGATGGGGT+TGG | 0.590927 | 8.4:+27774041 | MS.gene28534:CDS |
| ACTGAAGACGATGAATTCGA+TGG | 0.592884 | 8.4:+27774035 | MS.gene28534:CDS |
| CATTGGGAGATCCAGATCGC+TGG | 0.593421 | 8.4:+27773011 | MS.gene28534:CDS |
| CGGAGAATATGACGATGCAC+AGG | 0.593576 | 8.4:+27775003 | MS.gene28534:CDS |
| AATGGATCTGTTGCCGCGAG+AGG | 0.593766 | 8.4:+27774665 | MS.gene28534:CDS |
| AGCTGTGGCTTTCAACCTCA+GGG | 0.595172 | 8.4:+27775234 | MS.gene28534:CDS |
| TAAGAGAAACCTTGGAGATG+GGG | 0.600582 | 8.4:+27774936 | MS.gene28534:CDS |
| TCCTATGCATGATGATAGAG+AGG | 0.604538 | 8.4:+27774439 | MS.gene28534:CDS |
| ATGGTTTGGACAGACTGGCT+GGG | 0.605138 | 8.4:+27774012 | MS.gene28534:CDS |
| CCAATGGGGTCAGACTATGC+AGG | 0.606276 | 8.4:+27774308 | MS.gene28534:CDS |
| ACTTATCAAGAAATCGGTGA+TGG | 0.606842 | 8.4:+27773902 | MS.gene28534:CDS |
| AGAACTAGATCGTGTCAAAG+AGG | 0.608311 | 8.4:+27774526 | MS.gene28534:CDS |
| TGCACAGGAATGGGGCAGGA+GGG | 0.609298 | 8.4:+27775018 | MS.gene28534:CDS |
| AATGAGATAATGGAAGAACC+TGG | 0.610318 | 8.4:+27774623 | MS.gene28534:CDS |
| ACAGAGTCACTCAAATACAC+TGG | 0.610736 | 8.4:-27773987 | None:intergenic |
| ATATGAAAGAGGTGCAGCTG+TGG | 0.611950 | 8.4:+27775219 | MS.gene28534:CDS |
| CTTTGCAGGCCCATGGAGGG+CGG | 0.612994 | 8.4:+27775406 | MS.gene28534:CDS |
| ATTGAACCAGAATGATGGCA+GGG | 0.613658 | 8.4:-27774360 | None:intergenic |
| TTGGCTGTCATGGTCGAACA+TGG | 0.613753 | 8.4:-27773511 | None:intergenic |
| TAAGTATTCATACCAGTGGA+TGG | 0.614715 | 8.4:+27773722 | MS.gene28534:CDS |
| AGCTGCAAGAGAACAAGCTG+AGG | 0.615884 | 8.4:+27772902 | MS.gene28534:CDS |
| TTGAACCAGAATGATGGCAG+GGG | 0.618345 | 8.4:-27774359 | None:intergenic |
| GAAAGTTGATCAGTTGAGGT+CGG | 0.618396 | 8.4:+27773176 | MS.gene28534:CDS |
| TCTATGTTCTTGGACAAGAA+GGG | 0.618748 | 8.4:+27772823 | MS.gene28534:CDS |
| GTGAGTTTAGGCTGTTGGGT+CGG | 0.619713 | 8.4:+27774801 | MS.gene28534:CDS |
| TAATCAAGGCATACCTTGGG+TGG | 0.621357 | 8.4:-27773216 | None:intergenic |
| CATCATTCTGGTTCAATGGG+AGG | 0.622383 | 8.4:+27774366 | MS.gene28534:CDS |
| ACCTCTCTATCATCATGCAT+AGG | 0.623775 | 8.4:-27774440 | None:intergenic |
| TGTTCTTGGACAAGAAGGGT+AGG | 0.624202 | 8.4:+27772827 | MS.gene28534:CDS |
| AAGTAGACATCCAAAGCCTG+TGG | 0.627441 | 8.4:-27773883 | None:intergenic |
| AAGAGAAACCTTGGAGATGG+GGG | 0.628606 | 8.4:+27774937 | MS.gene28534:CDS |
| AGTGTATTTGAGTGACTCTG+TGG | 0.629618 | 8.4:+27773989 | MS.gene28534:CDS |
| TATGACGATGCACAGGAATG+GGG | 0.629656 | 8.4:+27775010 | MS.gene28534:CDS |
| AGACGTGTATGCACCCGAGA+AGG | 0.630360 | 8.4:-27774108 | None:intergenic |
| GGGCTAAGTATTCATACCAG+TGG | 0.633872 | 8.4:+27773718 | MS.gene28534:CDS |
| TAGGAGGAAAGGTGAATCGA+CGG | 0.635605 | 8.4:+27772846 | MS.gene28534:CDS |
| GGTCTTCCTACTGTTCAAGA+AGG | 0.638870 | 8.4:+27775568 | MS.gene28534:CDS |
| AGTAACCATGCACTTTATGG+TGG | 0.641671 | 8.4:+27773327 | MS.gene28534:CDS |
| CCAACATTTATCATAGAAGG+TGG | 0.642462 | 8.4:+27775547 | MS.gene28534:CDS |
| GATGATAGAGAGGTTAACCT+AGG | 0.642781 | 8.4:+27774449 | MS.gene28534:CDS |
| TCTTGGACAAGAAGGGTAGG+AGG | 0.644730 | 8.4:+27772830 | MS.gene28534:CDS |
| AAAGCTTTGCAGGCCCATGG+AGG | 0.646175 | 8.4:+27775402 | MS.gene28534:CDS |
| GAAGTTATCTGCTTCTGATG+GGG | 0.646981 | 8.4:+27775153 | MS.gene28534:CDS |
| TATATCAGAACATATTCCAG+AGG | 0.655858 | 8.4:-27774747 | None:intergenic |
| TCAAATACACTGGAAACTCG+GGG | 0.655912 | 8.4:-27773977 | None:intergenic |
| ACATGACTCCCAATAGTGAA+GGG | 0.656851 | 8.4:-27773271 | None:intergenic |
| CAGGCAACTGTGATCCCTGG+TGG | 0.659217 | 8.4:-27774085 | None:intergenic |
| TTGGGCCATAGATATGAACA+AGG | 0.659350 | 8.4:-27775189 | None:intergenic |
| ACTCGTCTTCACTGAAGACA+GGG | 0.659686 | 8.4:-27774247 | None:intergenic |
| CAGCATCAAATGATAGAACA+CGG | 0.666695 | 8.4:-27774487 | None:intergenic |
| GCTATAAGAAGGGAAACTGA+AGG | 0.667527 | 8.4:+27774779 | MS.gene28534:CDS |
| AAGAGTGTCGTTTAGCATGG+AGG | 0.669262 | 8.4:+27774895 | MS.gene28534:CDS |
| GATACTTGGGATACATAGTG+AGG | 0.681082 | 8.4:-27773143 | None:intergenic |
| GGTGATCATCATGAGAACCT+AGG | 0.683076 | 8.4:-27774466 | None:intergenic |
| AGTAGACATCCAAAGCCTGT+GGG | 0.688389 | 8.4:-27773882 | None:intergenic |
| GGGATACATAGTGAGGAACA+TGG | 0.693372 | 8.4:-27773136 | None:intergenic |
| CAACTGATCAACTTTCTCTG+AGG | 0.693802 | 8.4:-27773169 | None:intergenic |
| GCTGCAAGAGAACAAGCTGA+GGG | 0.695323 | 8.4:+27772903 | MS.gene28534:CDS |
| CAAGCGAATCCATGTCCTTG+GGG | 0.696095 | 8.4:-27773797 | None:intergenic |
| AGTTCAGTCTAGAGTAACTG+GGG | 0.703944 | 8.4:+27773698 | MS.gene28534:CDS |
| TTCTTGATAGCTCAAGACAG+CGG | 0.709851 | 8.4:+27775353 | MS.gene28534:CDS |
| ATTGAGCCAAGACCCTCTCG+CGG | 0.711176 | 8.4:-27774678 | None:intergenic |
| TGAAGACGATGAATTCGATG+GGG | 0.728581 | 8.4:+27774037 | MS.gene28534:CDS |
| CAAATACACTGGAAACTCGG+GGG | 0.730119 | 8.4:-27773976 | None:intergenic |
| TTATAATGCATCTTTCACTG+TGG | 0.732774 | 8.4:+27772779 | None:intergenic |
| ACCTCAGGGACAGAAGAAGG+GGG | 0.734829 | 8.4:+27775248 | MS.gene28534:CDS |
| TTGGATGATGACGAGCACAA+TGG | 0.755230 | 8.4:+27774863 | MS.gene28534:CDS |
| ATCTGGGTCAGAGTCCAATG+GGG | 0.758298 | 8.4:+27774294 | MS.gene28534:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTCTTTCATATTTTATTTTT+GGG | - | chr8.4:27775210-27775229 | None:intergenic | 15.0% |
| !! | AATGATGTAATTATGAAATC+TGG | - | chr8.4:27773840-27773859 | None:intergenic | 20.0% |
| !! | ATTATTCGTTTAATGGAAAT+GGG | + | chr8.4:27774582-27774601 | MS.gene28534:CDS | 20.0% |
| !! | CCAAAAATAAAATATGAAAG+AGG | + | chr8.4:27775208-27775227 | MS.gene28534:CDS | 20.0% |
| !!! | CATAATTACATCATTTTACA+GGG | + | chr8.4:27773845-27773864 | MS.gene28534:CDS | 20.0% |
| !!! | CCTCTTTCATATTTTATTTT+TGG | - | chr8.4:27775211-27775230 | None:intergenic | 20.0% |
| !!! | TCATAATTACATCATTTTAC+AGG | + | chr8.4:27773844-27773863 | MS.gene28534:CDS | 20.0% |
| ! | AAATTTCCAATAAGAAGAAG+AGG | + | chr8.4:27773640-27773659 | MS.gene28534:CDS | 25.0% |
| ! | AACTGTTGAACATGATATAA+AGG | + | chr8.4:27773362-27773381 | MS.gene28534:CDS | 25.0% |
| ! | AATATTCCTGAGAATGAATA+TGG | + | chr8.4:27773405-27773424 | MS.gene28534:CDS | 25.0% |
| ! | ATGTCTACTTATCAAGAAAT+CGG | + | chr8.4:27773896-27773915 | MS.gene28534:CDS | 25.0% |
| ! | CATTATTCGTTTAATGGAAA+TGG | + | chr8.4:27774581-27774600 | MS.gene28534:CDS | 25.0% |
| ! | GTTCATCATTATTCGTTTAA+TGG | + | chr8.4:27774575-27774594 | MS.gene28534:CDS | 25.0% |
| ! | TGATATAAAGGCCAAAATTA+TGG | + | chr8.4:27773374-27773393 | MS.gene28534:CDS | 25.0% |
| !! | AGATGTATTTGAAACTGAAA+TGG | + | chr8.4:27774142-27774161 | MS.gene28534:CDS | 25.0% |
| !! | ATTCAGATAGTCCATAATTT+TGG | - | chr8.4:27773388-27773407 | None:intergenic | 25.0% |
| AAACCTTCTTCCAAAATGTA+TGG | + | chr8.4:27774413-27774432 | MS.gene28534:CDS | 30.0% | |
| AACCCAACATTTATCATAGA+AGG | + | chr8.4:27775544-27775563 | MS.gene28534:CDS | 30.0% | |
| AGCACTATATTTGAAGAAAC+TGG | + | chr8.4:27774194-27774213 | MS.gene28534:CDS | 30.0% | |
| ATAAAACTACGCTTAGACTT+CGG | + | chr8.4:27775092-27775111 | MS.gene28534:CDS | 30.0% | |
| ATATTTCGACATACTATCTC+CGG | - | chr8.4:27775046-27775065 | None:intergenic | 30.0% | |
| CACCTTCTATGATAAATGTT+GGG | - | chr8.4:27775549-27775568 | None:intergenic | 30.0% | |
| TATATCAGAACATATTCCAG+AGG | - | chr8.4:27774750-27774769 | None:intergenic | 30.0% | |
| TGAGGATGTATATAAACTGT+GGG | + | chr8.4:27775501-27775520 | MS.gene28534:CDS | 30.0% | |
| TTGAGGATGTATATAAACTG+TGG | + | chr8.4:27775500-27775519 | MS.gene28534:CDS | 30.0% | |
| ! | AACTCATTTTGGATAGATCT+GGG | + | chr8.4:27774278-27774297 | MS.gene28534:CDS | 30.0% |
| !! | AAAAGAGAGTGCTATAAGAA+GGG | + | chr8.4:27774769-27774788 | MS.gene28534:CDS | 30.0% |
| !! | ACATCATTTTACAGGGTATT+TGG | + | chr8.4:27773852-27773871 | MS.gene28534:CDS | 30.0% |
| !! | CATCATTTTACAGGGTATTT+GGG | + | chr8.4:27773853-27773872 | MS.gene28534:CDS | 30.0% |
| !! | TAAAAGAGAGTGCTATAAGA+AGG | + | chr8.4:27774768-27774787 | MS.gene28534:CDS | 30.0% |
| !! | TACATTTTGGAAGAAGGTTT+TGG | - | chr8.4:27774413-27774432 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGTTCGTTTGGAA+GGG | - | chr8.4:27773486-27773505 | None:intergenic | 30.0% |
| !!! | TCAACAGTTTTTTGTTCGTT+TGG | - | chr8.4:27773491-27773510 | None:intergenic | 30.0% |
| !!! | TTGTTTTTACTGTTAGCAGA+GGG | + | chr8.4:27773430-27773449 | MS.gene28534:CDS | 30.0% |
| AAGGTATGCCTTGATTATTG+TGG | + | chr8.4:27773222-27773241 | MS.gene28534:CDS | 35.0% | |
| ACAATAATCAAGGCATACCT+TGG | - | chr8.4:27773223-27773242 | None:intergenic | 35.0% | |
| ACTCAAATACACTGGAAACT+CGG | - | chr8.4:27773982-27774001 | None:intergenic | 35.0% | |
| ACTTATCAAGAAATCGGTGA+TGG | + | chr8.4:27773902-27773921 | MS.gene28534:CDS | 35.0% | |
| ATATGGAACCTGACAATGTT+GGG | + | chr8.4:27772974-27772993 | MS.gene28534:CDS | 35.0% | |
| ATCGATCATGTTGATATGCT+TGG | + | chr8.4:27775064-27775083 | MS.gene28534:CDS | 35.0% | |
| ATGACAGCCAATCTGTTAAT+TGG | + | chr8.4:27773523-27773542 | MS.gene28534:CDS | 35.0% | |
| CAATAAGAAGAAGAGGAAGA+AGG | + | chr8.4:27773647-27773666 | MS.gene28534:CDS | 35.0% | |
| CAATAATCAAGGCATACCTT+GGG | - | chr8.4:27773222-27773241 | None:intergenic | 35.0% | |
| CAGCATCAAATGATAGAACA+CGG | - | chr8.4:27774490-27774509 | None:intergenic | 35.0% | |
| CCAACATTTATCATAGAAGG+TGG | + | chr8.4:27775547-27775566 | MS.gene28534:CDS | 35.0% | |
| CCACCTTCTATGATAAATGT+TGG | - | chr8.4:27775550-27775569 | None:intergenic | 35.0% | |
| CTCTGCTAACAGTAAAAACA+AGG | - | chr8.4:27773431-27773450 | None:intergenic | 35.0% | |
| CTTCTTCCTCTTCTTCTTAT+TGG | - | chr8.4:27773649-27773668 | None:intergenic | 35.0% | |
| GAAAAAGAAGGAATCTCTCT+TGG | + | chr8.4:27775304-27775323 | MS.gene28534:CDS | 35.0% | |
| GGAAACCTTGTTCATATCTA+TGG | + | chr8.4:27775184-27775203 | MS.gene28534:CDS | 35.0% | |
| TAAGTATTCATACCAGTGGA+TGG | + | chr8.4:27773722-27773741 | MS.gene28534:CDS | 35.0% | |
| TACGCATGTCAATGAGATAA+TGG | + | chr8.4:27774613-27774632 | MS.gene28534:CDS | 35.0% | |
| TATGAAATCTGGCCTGAAAA+GGG | - | chr8.4:27773829-27773848 | None:intergenic | 35.0% | |
| TATTCAGACCCTTCACTATT+GGG | + | chr8.4:27773263-27773282 | MS.gene28534:CDS | 35.0% | |
| TCTATGTTCTTGGACAAGAA+GGG | + | chr8.4:27772823-27772842 | MS.gene28534:CDS | 35.0% | |
| TGAAGTTATCTGCTTCTGAT+GGG | + | chr8.4:27775152-27775171 | MS.gene28534:CDS | 35.0% | |
| TGCCTTGATTATTGTGGATT+CGG | + | chr8.4:27773228-27773247 | MS.gene28534:CDS | 35.0% | |
| TGGTAGTAGGTTAATTGGTT+TGG | + | chr8.4:27774844-27774863 | MS.gene28534:CDS | 35.0% | |
| TTATGAAATCTGGCCTGAAA+AGG | - | chr8.4:27773830-27773849 | None:intergenic | 35.0% | |
| TTATTCAGACCCTTCACTAT+TGG | + | chr8.4:27773262-27773281 | MS.gene28534:CDS | 35.0% | |
| TTCTATGTTCTTGGACAAGA+AGG | + | chr8.4:27772822-27772841 | MS.gene28534:CDS | 35.0% | |
| TTGAAGATACAAAGCTTTGC+AGG | + | chr8.4:27775392-27775411 | MS.gene28534:CDS | 35.0% | |
| TTGAGTAACCATGCACTTTA+TGG | + | chr8.4:27773324-27773343 | MS.gene28534:CDS | 35.0% | |
| ! | AATTAACAGATTGGCTGTCA+TGG | - | chr8.4:27773524-27773543 | None:intergenic | 35.0% |
| ! | AGTCATCTGACAACTCATTT+TGG | + | chr8.4:27774267-27774286 | MS.gene28534:CDS | 35.0% |
| ! | ATAGAAGCACAGTGAGAAAT+AGG | - | chr8.4:27772808-27772827 | None:intergenic | 35.0% |
| ! | ATATAAACTGTGGGCTTTTG+TGG | + | chr8.4:27775510-27775529 | MS.gene28534:CDS | 35.0% |
| ! | CAACTCATTTTGGATAGATC+TGG | + | chr8.4:27774277-27774296 | MS.gene28534:CDS | 35.0% |
| ! | GAAACTGGAAGTATATCTGT+TGG | + | chr8.4:27774209-27774228 | MS.gene28534:CDS | 35.0% |
| ! | GACTTCGGTTTTTGATAAAC+TGG | + | chr8.4:27775107-27775126 | MS.gene28534:CDS | 35.0% |
| ! | GGGATTTCTGACTAATTTTG+AGG | + | chr8.4:27775483-27775502 | MS.gene28534:CDS | 35.0% |
| ! | TTTGGTGGTAGTAGGTTAAT+TGG | + | chr8.4:27774839-27774858 | MS.gene28534:CDS | 35.0% |
| !! | AATGAGATAATGGAAGAACC+TGG | + | chr8.4:27774623-27774642 | MS.gene28534:CDS | 35.0% |
| !! | CAAAAGCTTGCTGAAAAAGA+AGG | + | chr8.4:27775292-27775311 | MS.gene28534:CDS | 35.0% |
| !! | GATCTAGTTCTTGTGACATT+AGG | - | chr8.4:27774517-27774536 | None:intergenic | 35.0% |
| !!! | CAGTTTTTTGTTCGTTTGGA+AGG | - | chr8.4:27773487-27773506 | None:intergenic | 35.0% |
| !!! | CTTGTTTTTACTGTTAGCAG+AGG | + | chr8.4:27773429-27773448 | MS.gene28534:CDS | 35.0% |
| AATATGACGATGCACAGGAA+TGG | + | chr8.4:27775008-27775027 | MS.gene28534:CDS | 40.0% | |
| ACAAGGCCATATTCATTCTC+AGG | - | chr8.4:27773414-27773433 | None:intergenic | 40.0% | |
| ACAGAGTCACTCAAATACAC+TGG | - | chr8.4:27773990-27774009 | None:intergenic | 40.0% | |
| ACATGACTCCCAATAGTGAA+GGG | - | chr8.4:27773274-27773293 | None:intergenic | 40.0% | |
| ACATGGAAAATGCTTCTTCG+AGG | - | chr8.4:27773122-27773141 | None:intergenic | 40.0% | |
| ACCTCTCTATCATCATGCAT+AGG | - | chr8.4:27774443-27774462 | None:intergenic | 40.0% | |
| ACTCTCTAAATCGCAGGATA+TGG | + | chr8.4:27772957-27772976 | MS.gene28534:CDS | 40.0% | |
| ACTGAAGACGATGAATTCGA+TGG | + | chr8.4:27774035-27774054 | MS.gene28534:CDS | 40.0% | |
| AGAACTAGATCGTGTCAAAG+AGG | + | chr8.4:27774526-27774545 | MS.gene28534:CDS | 40.0% | |
| AGTAACCATGCACTTTATGG+TGG | + | chr8.4:27773327-27773346 | MS.gene28534:CDS | 40.0% | |
| AGTGTATTTGAGTGACTCTG+TGG | + | chr8.4:27773989-27774008 | MS.gene28534:CDS | 40.0% | |
| ATATGACGATGCACAGGAAT+GGG | + | chr8.4:27775009-27775028 | MS.gene28534:CDS | 40.0% | |
| ATATTCTCATTTGCCACCCA+AGG | + | chr8.4:27773203-27773222 | MS.gene28534:CDS | 40.0% | |
| ATGGAAAAGGCAGCTATGTA+AGG | + | chr8.4:27775437-27775456 | MS.gene28534:CDS | 40.0% | |
| ATTGAACCAGAATGATGGCA+GGG | - | chr8.4:27774363-27774382 | None:intergenic | 40.0% | |
| CAACTGATCAACTTTCTCTG+AGG | - | chr8.4:27773172-27773191 | None:intergenic | 40.0% | |
| CAGCCAATCTGTTAATTGGA+TGG | + | chr8.4:27773527-27773546 | MS.gene28534:CDS | 40.0% | |
| CAGTTACTCTAGACTGAACT+GGG | - | chr8.4:27773698-27773717 | None:intergenic | 40.0% | |
| CGACATCAAAGCTTGGAAAA+TGG | + | chr8.4:27774719-27774738 | MS.gene28534:CDS | 40.0% | |
| CTAAGAGAAACCTTGGAGAT+GGG | + | chr8.4:27774935-27774954 | MS.gene28534:CDS | 40.0% | |
| CTCAAATACACTGGAAACTC+GGG | - | chr8.4:27773981-27774000 | None:intergenic | 40.0% | |
| CTGAAGACGATGAATTCGAT+GGG | + | chr8.4:27774036-27774055 | MS.gene28534:CDS | 40.0% | |
| CTGAAGTTATCTGCTTCTGA+TGG | + | chr8.4:27775151-27775170 | MS.gene28534:CDS | 40.0% | |
| CTTCAACAGACTCTTCTTCA+GGG | - | chr8.4:27774553-27774572 | None:intergenic | 40.0% | |
| CTTGAAGAAGCTTCAGAAGA+TGG | + | chr8.4:27772931-27772950 | MS.gene28534:CDS | 40.0% | |
| GAAGTTATCTGCTTCTGATG+GGG | + | chr8.4:27775153-27775172 | MS.gene28534:CDS | 40.0% | |
| GACCGAATCCACAATAATCA+AGG | - | chr8.4:27773233-27773252 | None:intergenic | 40.0% | |
| GAGCCATCCAATTAACAGAT+TGG | - | chr8.4:27773533-27773552 | None:intergenic | 40.0% | |
| GATACTTGGGATACATAGTG+AGG | - | chr8.4:27773146-27773165 | None:intergenic | 40.0% | |
| GATATGGAACCTGACAATGT+TGG | + | chr8.4:27772973-27772992 | MS.gene28534:CDS | 40.0% | |
| GATGATAGAGAGGTTAACCT+AGG | + | chr8.4:27774449-27774468 | MS.gene28534:CDS | 40.0% | |
| GCTATAAGAAGGGAAACTGA+AGG | + | chr8.4:27774779-27774798 | MS.gene28534:CDS | 40.0% | |
| GCTCAATGTGCTAGGAATAA+AGG | + | chr8.4:27773549-27773568 | MS.gene28534:CDS | 40.0% | |
| TAAGAGAAACCTTGGAGATG+GGG | + | chr8.4:27774936-27774955 | MS.gene28534:CDS | 40.0% | |
| TACATGACTCCCAATAGTGA+AGG | - | chr8.4:27773275-27773294 | None:intergenic | 40.0% | |
| TATTTGAGTGACTCTGTGGA+TGG | + | chr8.4:27773993-27774012 | MS.gene28534:CDS | 40.0% | |
| TCAAATACACTGGAAACTCG+GGG | - | chr8.4:27773980-27773999 | None:intergenic | 40.0% | |
| TCACTGTGCTTCTATGTTCT+TGG | + | chr8.4:27772813-27772832 | MS.gene28534:CDS | 40.0% | |
| TCCTATGCATGATGATAGAG+AGG | + | chr8.4:27774439-27774458 | MS.gene28534:CDS | 40.0% | |
| TCTTCAACAGACTCTTCTTC+AGG | - | chr8.4:27774554-27774573 | None:intergenic | 40.0% | |
| TGAAGACGATGAATTCGATG+GGG | + | chr8.4:27774037-27774056 | MS.gene28534:CDS | 40.0% | |
| TGCACAGTGCATGGTTTAAA+TGG | + | chr8.4:27773580-27773599 | MS.gene28534:CDS | 40.0% | |
| TTGGGCCATAGATATGAACA+AGG | - | chr8.4:27775192-27775211 | None:intergenic | 40.0% | |
| ! | AGGGTCAGCTTTTAAATTGC+TGG | + | chr8.4:27773449-27773468 | MS.gene28534:CDS | 40.0% |
| ! | AGTTCAGTCTAGAGTAACTG+GGG | + | chr8.4:27773698-27773717 | MS.gene28534:CDS | 40.0% |
| ! | CAGAGAAAGTTGATCAGTTG+AGG | + | chr8.4:27773172-27773191 | MS.gene28534:CDS | 40.0% |
| ! | CAGTTCAGTCTAGAGTAACT+GGG | + | chr8.4:27773697-27773716 | MS.gene28534:CDS | 40.0% |
| ! | CATAGGACTGCCATACATTT+TGG | - | chr8.4:27774426-27774445 | None:intergenic | 40.0% |
| ! | CTTTATGGTGGTGCTGAAAA+AGG | + | chr8.4:27773339-27773358 | MS.gene28534:CDS | 40.0% |
| ! | GAAAGTTGATCAGTTGAGGT+CGG | + | chr8.4:27773176-27773195 | MS.gene28534:CDS | 40.0% |
| ! | GCAAGCTTTTGAACAATCTC+AGG | - | chr8.4:27775283-27775302 | None:intergenic | 40.0% |
| ! | TTCTCTGAGGACAGATACTT+GGG | - | chr8.4:27773159-27773178 | None:intergenic | 40.0% |
| ! | TTCTTGATAGCTCAAGACAG+CGG | + | chr8.4:27775353-27775372 | MS.gene28534:CDS | 40.0% |
| ! | TTTCTCTGAGGACAGATACT+TGG | - | chr8.4:27773160-27773179 | None:intergenic | 40.0% |
| !! | AAGAAGAGTGTCGTTTAGCA+TGG | + | chr8.4:27774892-27774911 | MS.gene28534:CDS | 40.0% |
| !! | CTGCCATACATTTTGGAAGA+AGG | - | chr8.4:27774419-27774438 | None:intergenic | 40.0% |
| !! | TGCCATCATTCTGGTTCAAT+GGG | + | chr8.4:27774363-27774382 | MS.gene28534:CDS | 40.0% |
| !!! | GCATTGACGGGTTTCTTTTT+AGG | - | chr8.4:27772876-27772895 | None:intergenic | 40.0% |
| AAAATGCTTCTTCGAGGCTG+AGG | - | chr8.4:27773116-27773135 | None:intergenic | 45.0% | |
| AAACCATGCACTGTGCACTT+TGG | - | chr8.4:27773577-27773596 | None:intergenic | 45.0% | |
| AAAGAAACCCGTCAATGCTC+CGG | + | chr8.4:27772878-27772897 | MS.gene28534:CDS | 45.0% | |
| AAGAGAAACCTTGGAGATGG+GGG | + | chr8.4:27774937-27774956 | MS.gene28534:CDS | 45.0% | |
| AAGTAGACATCCAAAGCCTG+TGG | - | chr8.4:27773886-27773905 | None:intergenic | 45.0% | |
| AATCTTCACCATTCCTGACC+CGG | - | chr8.4:27773955-27773974 | None:intergenic | 45.0% | |
| ACTCGTCTTCACTGAAGACA+GGG | - | chr8.4:27774250-27774269 | None:intergenic | 45.0% | |
| AGGAAGAAGGATTCAGCTAC+TGG | + | chr8.4:27773660-27773679 | MS.gene28534:CDS | 45.0% | |
| AGTAGACATCCAAAGCCTGT+GGG | - | chr8.4:27773885-27773904 | None:intergenic | 45.0% | |
| ATTGGATGGCTCAATGTGCT+AGG | + | chr8.4:27773541-27773560 | MS.gene28534:CDS | 45.0% | |
| CAAATACACTGGAAACTCGG+GGG | - | chr8.4:27773979-27773998 | None:intergenic | 45.0% | |
| CAAGCCTTCAAAATCAGTCC+GGG | + | chr8.4:27773925-27773944 | MS.gene28534:CDS | 45.0% | |
| CATTGAACCAGAATGATGGC+AGG | - | chr8.4:27774364-27774383 | None:intergenic | 45.0% | |
| CCAGTTACTCTAGACTGAAC+TGG | - | chr8.4:27773699-27773718 | None:intergenic | 45.0% | |
| CCATCTCCAAGGTTTCTCTT+AGG | - | chr8.4:27774937-27774956 | None:intergenic | 45.0% | |
| CCTAAGAGAAACCTTGGAGA+TGG | + | chr8.4:27774934-27774953 | MS.gene28534:CDS | 45.0% | |
| CTCCCATTGAACCAGAATGA+TGG | - | chr8.4:27774368-27774387 | None:intergenic | 45.0% | |
| GAAGGAATCTCTCTTGGCAT+TGG | + | chr8.4:27775310-27775329 | MS.gene28534:CDS | 45.0% | |
| GAAGGTGAGTTTAGGCTGTT+GGG | + | chr8.4:27774797-27774816 | MS.gene28534:CDS | 45.0% | |
| GAAGTCGTCACAGCTTCATT+GGG | + | chr8.4:27775463-27775482 | MS.gene28534:CDS | 45.0% | |
| GCAAGCCTTCAAAATCAGTC+CGG | + | chr8.4:27773924-27773943 | MS.gene28534:CDS | 45.0% | |
| GCTTCTGATGGGGATGTAAA+AGG | + | chr8.4:27775163-27775182 | MS.gene28534:CDS | 45.0% | |
| GGGAAACTGAAGGTGAGTTT+AGG | + | chr8.4:27774789-27774808 | MS.gene28534:CDS | 45.0% | |
| GGGATACATAGTGAGGAACA+TGG | - | chr8.4:27773139-27773158 | None:intergenic | 45.0% | |
| GGGCTAAGTATTCATACCAG+TGG | + | chr8.4:27773718-27773737 | MS.gene28534:CDS | 45.0% | |
| GGTCTTCCTACTGTTCAAGA+AGG | + | chr8.4:27775568-27775587 | MS.gene28534:CDS | 45.0% | |
| GGTGATCATCATGAGAACCT+AGG | - | chr8.4:27774469-27774488 | None:intergenic | 45.0% | |
| GTATTTGGGTATGATCCCAC+AGG | + | chr8.4:27773867-27773886 | MS.gene28534:CDS | 45.0% | |
| GTCGAGCAAAGTTTGAGAGT+TGG | - | chr8.4:27773606-27773625 | None:intergenic | 45.0% | |
| TAATCAAGGCATACCTTGGG+TGG | - | chr8.4:27773219-27773238 | None:intergenic | 45.0% | |
| TAGGAGGAAAGGTGAATCGA+CGG | + | chr8.4:27772846-27772865 | MS.gene28534:CDS | 45.0% | |
| TATGACGATGCACAGGAATG+GGG | + | chr8.4:27775010-27775029 | MS.gene28534:CDS | 45.0% | |
| TCAGAGCCTTCTTGAACAGT+AGG | - | chr8.4:27775577-27775596 | None:intergenic | 45.0% | |
| TCTTGCTCGACATCAAAGCT+TGG | + | chr8.4:27774712-27774731 | MS.gene28534:CDS | 45.0% | |
| TGAAGGTGAGTTTAGGCTGT+TGG | + | chr8.4:27774796-27774815 | MS.gene28534:CDS | 45.0% | |
| TGAAGTCGTCACAGCTTCAT+TGG | + | chr8.4:27775462-27775481 | MS.gene28534:CDS | 45.0% | |
| TGTTCTTGGACAAGAAGGGT+AGG | + | chr8.4:27772827-27772846 | MS.gene28534:CDS | 45.0% | |
| TTGAACCAGAATGATGGCAG+GGG | - | chr8.4:27774362-27774381 | None:intergenic | 45.0% | |
| TTGCTTGATGCTGGGTCATT+GGG | + | chr8.4:27773774-27773793 | MS.gene28534:CDS | 45.0% | |
| ! | AGAGCACCTAAGAGAAACCT+TGG | + | chr8.4:27774928-27774947 | MS.gene28534:CDS | 45.0% |
| ! | ATATGAAAGAGGTGCAGCTG+TGG | + | chr8.4:27775219-27775238 | MS.gene28534:CDS | 45.0% |
| ! | CCAGTTCAGTCTAGAGTAAC+TGG | + | chr8.4:27773696-27773715 | MS.gene28534:CDS | 45.0% |
| ! | TGGAGTACTCTCTAAATCGC+AGG | + | chr8.4:27772951-27772970 | MS.gene28534:CDS | 45.0% |
| ! | TTGGAAAATGGCTCTACCTC+TGG | + | chr8.4:27774731-27774750 | MS.gene28534:CDS | 45.0% |
| ! | TTGGATGATGACGAGCACAA+TGG | + | chr8.4:27774863-27774882 | MS.gene28534:CDS | 45.0% |
| !! | AAGAGTGTCGTTTAGCATGG+AGG | + | chr8.4:27774895-27774914 | MS.gene28534:CDS | 45.0% |
| !! | AGAGAAGGGAATCGATTTGG+TGG | + | chr8.4:27774824-27774843 | MS.gene28534:CDS | 45.0% |
| !! | CATCATTCTGGTTCAATGGG+AGG | + | chr8.4:27774366-27774385 | MS.gene28534:CDS | 45.0% |
| !! | CATGACAGCTCTGAAAGAGA+TGG | + | chr8.4:27774167-27774186 | MS.gene28534:CDS | 45.0% |
| !! | CTGCCATCATTCTGGTTCAA+TGG | + | chr8.4:27774362-27774381 | MS.gene28534:CDS | 45.0% |
| !! | GGAATCGATTTGGTGGTAGT+AGG | + | chr8.4:27774831-27774850 | MS.gene28534:CDS | 45.0% |
| !! | TACTCCCGGACTGATTTTGA+AGG | - | chr8.4:27773932-27773951 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGACTGTTGCTTC+TGG | - | chr8.4:27774397-27774416 | None:intergenic | 45.0% |
| AAACGTCCGTTCAGCTGCAA+GGG | - | chr8.4:27773076-27773095 | None:intergenic | 50.0% | |
| AACCTCAGGGACAGAAGAAG+GGG | + | chr8.4:27775247-27775266 | MS.gene28534:CDS | 50.0% | |
| ACCAGTGAAGCAGGTCAGAA+TGG | + | chr8.4:27774647-27774666 | MS.gene28534:CDS | 50.0% | |
| ACCTGACAATGTTGGGAACC+AGG | + | chr8.4:27772981-27773000 | MS.gene28534:CDS | 50.0% | |
| AGATATGTCCCCCATCTCCA+AGG | - | chr8.4:27774948-27774967 | None:intergenic | 50.0% | |
| AGATCTGGGTCAGAGTCCAA+TGG | + | chr8.4:27774292-27774311 | MS.gene28534:CDS | 50.0% | |
| AGCTGCAAGAGAACAAGCTG+AGG | + | chr8.4:27772902-27772921 | MS.gene28534:CDS | 50.0% | |
| AGCTGTGGCTTTCAACCTCA+GGG | + | chr8.4:27775234-27775253 | MS.gene28534:CDS | 50.0% | |
| ATCACAGTTGCCTGCCTTCT+CGG | + | chr8.4:27774094-27774113 | MS.gene28534:CDS | 50.0% | |
| ATCTGGGTCAGAGTCCAATG+GGG | + | chr8.4:27774294-27774313 | MS.gene28534:CDS | 50.0% | |
| CAACCTCAGGGACAGAAGAA+GGG | + | chr8.4:27775246-27775265 | MS.gene28534:CDS | 50.0% | |
| CAAGCGAATCCATGTCCTTG+GGG | - | chr8.4:27773800-27773819 | None:intergenic | 50.0% | |
| CAGCACCACCATAAAGTGCA+TGG | - | chr8.4:27773335-27773354 | None:intergenic | 50.0% | |
| CCAAGCGAATCCATGTCCTT+GGG | - | chr8.4:27773801-27773820 | None:intergenic | 50.0% | |
| CGGAGAATATGACGATGCAC+AGG | + | chr8.4:27775003-27775022 | MS.gene28534:CDS | 50.0% | |
| CGGAGAGAAGGGAATCGATT+TGG | + | chr8.4:27774821-27774840 | MS.gene28534:CDS | 50.0% | |
| CTTGCTTGATGCTGGGTCAT+TGG | + | chr8.4:27773773-27773792 | MS.gene28534:CDS | 50.0% | |
| GACAAGAAGGGTAGGAGGAA+AGG | + | chr8.4:27772835-27772854 | MS.gene28534:CDS | 50.0% | |
| GACGATGAATTCGATGGGGT+TGG | + | chr8.4:27774041-27774060 | MS.gene28534:CDS | 50.0% | |
| GACTCGTCTTCACTGAAGAC+AGG | - | chr8.4:27774251-27774270 | None:intergenic | 50.0% | |
| GAGTGACTCTGTGGATGGTT+TGG | + | chr8.4:27773998-27774017 | MS.gene28534:CDS | 50.0% | |
| GATCTGGGTCAGAGTCCAAT+GGG | + | chr8.4:27774293-27774312 | MS.gene28534:CDS | 50.0% | |
| GATGAAGAAGCCAGCAGTGA+CGG | + | chr8.4:27774983-27775002 | MS.gene28534:CDS | 50.0% | |
| GCTGCAAGAGAACAAGCTGA+GGG | + | chr8.4:27772903-27772922 | MS.gene28534:CDS | 50.0% | |
| GCTTGTTCTCTTGCAGCTTC+CGG | - | chr8.4:27772900-27772919 | None:intergenic | 50.0% | |
| GGCATGTCTTGCTTGATGCT+GGG | + | chr8.4:27773766-27773785 | MS.gene28534:CDS | 50.0% | |
| GTCATATTCTCCGTCACTGC+TGG | - | chr8.4:27774996-27775015 | None:intergenic | 50.0% | |
| GTGAGTTTAGGCTGTTGGGT+CGG | + | chr8.4:27774801-27774820 | MS.gene28534:CDS | 50.0% | |
| TACAAAGCTTTGCAGGCCCA+TGG | + | chr8.4:27775399-27775418 | MS.gene28534:CDS | 50.0% | |
| TCAACCTCAGGGACAGAAGA+AGG | + | chr8.4:27775245-27775264 | MS.gene28534:CDS | 50.0% | |
| TCCATTCTGACCTGCTTCAC+TGG | - | chr8.4:27774651-27774670 | None:intergenic | 50.0% | |
| TCCTGGTTCCCAACATTGTC+AGG | - | chr8.4:27772985-27773004 | None:intergenic | 50.0% | |
| TCTTGGACAAGAAGGGTAGG+AGG | + | chr8.4:27772830-27772849 | MS.gene28534:CDS | 50.0% | |
| TGGCATGTCTTGCTTGATGC+TGG | + | chr8.4:27773765-27773784 | MS.gene28534:CDS | 50.0% | |
| TTCATACCAGTGGATGGCGT+TGG | + | chr8.4:27773728-27773747 | MS.gene28534:CDS | 50.0% | |
| TTGGCTGTCATGGTCGAACA+TGG | - | chr8.4:27773514-27773533 | None:intergenic | 50.0% | |
| ! | ACTTTTGAACCTCGCCACCA+GGG | + | chr8.4:27774071-27774090 | MS.gene28534:CDS | 50.0% |
| ! | ATGGTTTGGACAGACTGGCT+GGG | + | chr8.4:27774012-27774031 | MS.gene28534:CDS | 50.0% |
| ! | CAAAATCAGTCCGGGAGTAC+CGG | + | chr8.4:27773933-27773952 | MS.gene28534:CDS | 50.0% |
| ! | TGTGGATGGTTTGGACAGAC+TGG | + | chr8.4:27774007-27774026 | MS.gene28534:CDS | 50.0% |
| !! | AAAATCAGTCCGGGAGTACC+GGG | + | chr8.4:27773934-27773953 | MS.gene28534:CDS | 50.0% |
| AAAGCTTTGCAGGCCCATGG+AGG | + | chr8.4:27775402-27775421 | MS.gene28534:CDS | 55.0% | |
| AAGCTTTGCAGGCCCATGGA+GGG | + | chr8.4:27775403-27775422 | MS.gene28534:CDS | 55.0% | |
| AATGGATCTGTTGCCGCGAG+AGG | + | chr8.4:27774665-27774684 | MS.gene28534:CDS | 55.0% | |
| ACCTCAGGGACAGAAGAAGG+GGG | + | chr8.4:27775248-27775267 | MS.gene28534:CDS | 55.0% | |
| AGACGTGTATGCACCCGAGA+AGG | - | chr8.4:27774111-27774130 | None:intergenic | 55.0% | |
| ATCTCCCAATGCTGGCATCC+TGG | - | chr8.4:27773002-27773021 | None:intergenic | 55.0% | |
| ATGGATCTGTTGCCGCGAGA+GGG | + | chr8.4:27774666-27774685 | MS.gene28534:CDS | 55.0% | |
| ATTGAGCCAAGACCCTCTCG+CGG | - | chr8.4:27774681-27774700 | None:intergenic | 55.0% | |
| CAAACGTCCGTTCAGCTGCA+AGG | - | chr8.4:27773077-27773096 | None:intergenic | 55.0% | |
| CAGCTGTGGCTTTCAACCTC+AGG | + | chr8.4:27775233-27775252 | MS.gene28534:CDS | 55.0% | |
| CATTGGGAGATCCAGATCGC+TGG | + | chr8.4:27773011-27773030 | MS.gene28534:CDS | 55.0% | |
| CCAATGGGGTCAGACTATGC+AGG | + | chr8.4:27774308-27774327 | MS.gene28534:CDS | 55.0% | |
| CCCAAGGACATGGATTCGCT+TGG | + | chr8.4:27773798-27773817 | MS.gene28534:CDS | 55.0% | |
| CCTGCATAGTCTGACCCCAT+TGG | - | chr8.4:27774311-27774330 | None:intergenic | 55.0% | |
| CGATCTGGATCTCCCAATGC+TGG | - | chr8.4:27773010-27773029 | None:intergenic | 55.0% | |
| CGTTGGCACAGCAGAACAAC+TGG | + | chr8.4:27773745-27773764 | MS.gene28534:CDS | 55.0% | |
| CTTCTCCCCTGCCATCATTC+TGG | + | chr8.4:27774354-27774373 | MS.gene28534:CDS | 55.0% | |
| GAACCTGGAACCAGTGAAGC+AGG | + | chr8.4:27774638-27774657 | MS.gene28534:CDS | 55.0% | |
| GAGGCTGAGGATGTCTTCCT+CGG | - | chr8.4:27773103-27773122 | None:intergenic | 55.0% | |
| GATGACGAGCACAATGGTCG+AGG | + | chr8.4:27774869-27774888 | MS.gene28534:CDS | 55.0% | |
| GCCAAGCGAATCCATGTCCT+TGG | - | chr8.4:27773802-27773821 | None:intergenic | 55.0% | |
| GGAACCAGGATGCCAGCATT+GGG | + | chr8.4:27772995-27773014 | MS.gene28534:CDS | 55.0% | |
| GGGTATGATCCCACAGGCTT+TGG | + | chr8.4:27773873-27773892 | MS.gene28534:CDS | 55.0% | |
| GTGCCAAAGTGCACAGTGCA+TGG | + | chr8.4:27773571-27773590 | MS.gene28534:CDS | 55.0% | |
| TCACAGTTGCCTGCCTTCTC+GGG | + | chr8.4:27774095-27774114 | MS.gene28534:CDS | 55.0% | |
| TGAACGGACGTTTGAGTCCG+AGG | + | chr8.4:27773083-27773102 | MS.gene28534:CDS | 55.0% | |
| ! | GACTTTTGAACCTCGCCACC+AGG | + | chr8.4:27774070-27774089 | MS.gene28534:CDS | 55.0% |
| ! | GATGGTTTGGACAGACTGGC+TGG | + | chr8.4:27774011-27774030 | MS.gene28534:CDS | 55.0% |
| !! | TGACCTGCTTCACTGGTTCC+AGG | - | chr8.4:27774644-27774663 | None:intergenic | 55.0% |
| !! | TGCAGCTTCCGGAGCATTGA+CGG | - | chr8.4:27772889-27772908 | None:intergenic | 55.0% |
| !!! | CGCTTGGCTTGTCCCTTTTC+AGG | + | chr8.4:27773814-27773833 | MS.gene28534:CDS | 55.0% |
| ACGATGCACAGGAATGGGGC+AGG | + | chr8.4:27775014-27775033 | MS.gene28534:CDS | 60.0% | |
| AGGCAGGCAACTGTGATCCC+TGG | - | chr8.4:27774091-27774110 | None:intergenic | 60.0% | |
| AGGCTGTTGGGTCGGAGAGA+AGG | + | chr8.4:27774809-27774828 | MS.gene28534:CDS | 60.0% | |
| ATGCACAGGAATGGGGCAGG+AGG | + | chr8.4:27775017-27775036 | MS.gene28534:CDS | 60.0% | |
| ATTCAGCCTGGCCAGCGATC+TGG | - | chr8.4:27773025-27773044 | None:intergenic | 60.0% | |
| CAGGCAACTGTGATCCCTGG+TGG | - | chr8.4:27774088-27774107 | None:intergenic | 60.0% | |
| CATTCCTGACCCGGTACTCC+CGG | - | chr8.4:27773946-27773965 | None:intergenic | 60.0% | |
| CCACTGCCCTTGCAGCTGAA+CGG | + | chr8.4:27773067-27773086 | MS.gene28534:CDS | 60.0% | |
| GGCTGTTGGGTCGGAGAGAA+GGG | + | chr8.4:27774810-27774829 | MS.gene28534:CDS | 60.0% | |
| GGGAACCAGGATGCCAGCAT+TGG | + | chr8.4:27772994-27773013 | MS.gene28534:CDS | 60.0% | |
| GTCATTGGGCCCCAAGGACA+TGG | + | chr8.4:27773788-27773807 | MS.gene28534:CDS | 60.0% | |
| GTGTATGCACCCGAGAAGGC+AGG | - | chr8.4:27774107-27774126 | None:intergenic | 60.0% | |
| TGCACAGGAATGGGGCAGGA+GGG | + | chr8.4:27775018-27775037 | MS.gene28534:CDS | 60.0% | |
| ! | AACTGTGATCCCTGGTGGCG+AGG | - | chr8.4:27774083-27774102 | None:intergenic | 60.0% |
| !! | GCAGCTTCCGGAGCATTGAC+GGG | - | chr8.4:27772888-27772907 | None:intergenic | 60.0% |
| CCGTTCAGCTGCAAGGGCAG+TGG | - | chr8.4:27773070-27773089 | None:intergenic | 65.0% | |
| CTCACGCTGCGCATTCAGCC+TGG | - | chr8.4:27773037-27773056 | None:intergenic | 65.0% | |
| CTGTTGCCGCGAGAGGGTCT+TGG | + | chr8.4:27774672-27774691 | MS.gene28534:CDS | 65.0% | |
| CTTTGCAGGCCCATGGAGGG+CGG | + | chr8.4:27775406-27775425 | MS.gene28534:CDS | 65.0% | |
| GCCCCCTTCTTCTGTCCCTG+AGG | - | chr8.4:27775252-27775271 | None:intergenic | 65.0% | |
| GCTGTGCCAACGCCATCCAC+TGG | - | chr8.4:27773737-27773756 | None:intergenic | 65.0% | |
| GGAATGGGGCAGGAGGGAAC+CGG | + | chr8.4:27775024-27775043 | MS.gene28534:CDS | 65.0% | |
| GGAGATCCAGATCGCTGGCC+AGG | + | chr8.4:27773016-27773035 | MS.gene28534:CDS | 65.0% | |
| TGCTGGGTCATTGGGCCCCA+AGG | + | chr8.4:27773782-27773801 | MS.gene28534:CDS | 65.0% | |
| ! | GGCGGTCGGCGTGATGGAAA+AGG | + | chr8.4:27775424-27775443 | MS.gene28534:CDS | 65.0% |
| !! | CGGGAGTACCGGGTCAGGAA+TGG | + | chr8.4:27773944-27773963 | MS.gene28534:CDS | 65.0% |
| ATCACGCCGACCGCCCTCCA+TGG | - | chr8.4:27775419-27775438 | None:intergenic | 70.0% | |
| ATGGAGGGCGGTCGGCGTGA+TGG | + | chr8.4:27775418-27775437 | MS.gene28534:CDS | 70.0% | |
| TCACGCCGACCGCCCTCCAT+GGG | - | chr8.4:27775418-27775437 | None:intergenic | 70.0% | |
| !! | CAGTCCGGGAGTACCGGGTC+AGG | + | chr8.4:27773939-27773958 | MS.gene28534:CDS | 70.0% |
| GCAGGCCCATGGAGGGCGGT+CGG | + | chr8.4:27775410-27775429 | MS.gene28534:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 27772784 | 27775603 | 27772784 | ID=MS.gene28534 |
| chr8.4 | mRNA | 27772784 | 27775603 | 27772784 | ID=MS.gene28534.t1;Parent=MS.gene28534 |
| chr8.4 | exon | 27772784 | 27775603 | 27772784 | ID=MS.gene28534.t1.exon1;Parent=MS.gene28534.t1 |
| chr8.4 | CDS | 27772784 | 27775603 | 27772784 | ID=cds.MS.gene28534.t1;Parent=MS.gene28534.t1 |
| Gene Sequence |
| Protein sequence |
