Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28988.t1 | XP_003607363.1 | 98.4 | 512 | 8 | 0 | 4 | 515 | 12 | 523 | 2.50E-293 | 1017.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28988.t1 | Q56YN3 | 72.0 | 510 | 134 | 4 | 7 | 512 | 20 | 524 | 4.0e-207 | 722.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28988.t1 | G7JRM7 | 98.4 | 512 | 8 | 0 | 4 | 515 | 12 | 523 | 1.8e-293 | 1017.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052344 | MS.gene28988 | 0.927593 | 9.47E-92 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28988.t1 | MTR_4g076990 | 98.438 | 512 | 8 | 0 | 4 | 515 | 12 | 523 | 0.0 | 1048 |
| MS.gene28988.t1 | MTR_3g088575 | 45.706 | 326 | 166 | 5 | 189 | 509 | 565 | 884 | 1.33e-88 | 291 |
| MS.gene28988.t1 | MTR_1g029620 | 45.732 | 328 | 163 | 7 | 189 | 509 | 689 | 1008 | 8.97e-82 | 274 |
| MS.gene28988.t1 | MTR_1g029620 | 46.388 | 263 | 126 | 7 | 189 | 444 | 689 | 943 | 1.50e-62 | 220 |
| MS.gene28988.t1 | MTR_3g088575 | 42.731 | 227 | 119 | 5 | 189 | 410 | 660 | 880 | 5.91e-48 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28988.t1 | AT3G21070 | 71.961 | 510 | 134 | 4 | 7 | 512 | 20 | 524 | 0.0 | 744 |
| MS.gene28988.t1 | AT3G21070 | 71.961 | 510 | 134 | 4 | 7 | 512 | 98 | 602 | 0.0 | 743 |
| MS.gene28988.t1 | AT3G21070 | 72.314 | 484 | 122 | 3 | 36 | 512 | 1 | 479 | 0.0 | 719 |
| MS.gene28988.t1 | AT3G21070 | 63.636 | 308 | 103 | 4 | 7 | 310 | 98 | 400 | 4.24e-127 | 377 |
| MS.gene28988.t1 | AT1G21640 | 43.865 | 326 | 172 | 5 | 189 | 509 | 665 | 984 | 1.13e-81 | 274 |
| MS.gene28988.t1 | AT1G21640 | 42.773 | 339 | 171 | 6 | 189 | 509 | 665 | 998 | 4.50e-81 | 272 |
Find 133 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACTGCTTTCTCAGAAAA+TGG | 0.204921 | 4.2:+32677468 | None:intergenic |
| ATCATCTTACCTCACAAATT+TGG | 0.209583 | 4.2:-32673449 | MS.gene28988:CDS |
| TACCAGAGCATGTGGCTTTA+CGG | 0.308632 | 4.2:-32672862 | MS.gene28988:CDS |
| CGGCAGTACTGCATATTCTT+TGG | 0.311982 | 4.2:-32673359 | MS.gene28988:CDS |
| TTCCTTCAGCAACTTTCCTT+AGG | 0.322382 | 4.2:+32677245 | None:intergenic |
| CATATTGACCAAACCAAATT+CGG | 0.325935 | 4.2:-32675539 | MS.gene28988:CDS |
| TTTATATAATGTGGTTTGTT+TGG | 0.329273 | 4.2:+32676457 | None:intergenic |
| GAGCATCTTGGAATCAGAAT+TGG | 0.335509 | 4.2:+32676355 | None:intergenic |
| TCTGATTTCCTTCATGGAAC+AGG | 0.341225 | 4.2:-32677544 | None:intergenic |
| TATTCCAGATCTCTTTGAAA+TGG | 0.348895 | 4.2:-32675585 | MS.gene28988:intron |
| ACCAGAGCATGTGGCTTTAC+GGG | 0.354597 | 4.2:-32672861 | MS.gene28988:CDS |
| ATATCAGTGGCCTAAAAGAT+AGG | 0.356411 | 4.2:+32672885 | None:intergenic |
| GCTTCTTCAATTACCAATCC+AGG | 0.364612 | 4.2:-32677442 | MS.gene28988:CDS |
| GTGCCGTAATGTAATACTAA+TGG | 0.366497 | 4.2:+32673570 | None:intergenic |
| GATAGGGAATGTGGGCAAAT+TGG | 0.368637 | 4.2:+32672902 | None:intergenic |
| AGCATCTTGGAATCAGAATT+GGG | 0.369523 | 4.2:+32676356 | None:intergenic |
| ACGTGTCCAGGTCGATCTTC+TGG | 0.371257 | 4.2:-32675062 | MS.gene28988:CDS |
| TGCCGTAATGTAATACTAAT+GGG | 0.375757 | 4.2:+32673571 | None:intergenic |
| AACTGAATCCGAATTTGGTT+TGG | 0.384384 | 4.2:+32675531 | None:intergenic |
| TCCTTCAGCAACTTTCCTTA+GGG | 0.400240 | 4.2:+32677246 | None:intergenic |
| TCTTCAAATCTGCAGGTTCC+GGG | 0.402559 | 4.2:-32672938 | MS.gene28988:intron |
| AAAATCATGCCTTGAGCATT+GGG | 0.404330 | 4.2:-32676513 | MS.gene28988:CDS |
| TTTGTTCCCATGACGTCCTT+AGG | 0.405594 | 4.2:-32676388 | MS.gene28988:CDS |
| CCTAAAGAAAAGGGGACAAT+AGG | 0.406636 | 4.2:+32673759 | None:intergenic |
| GTTGACCTTGTGATAACTCT+TGG | 0.415690 | 4.2:-32674596 | MS.gene28988:CDS |
| GCATTCATGAGGGTCTTCAT+TGG | 0.415841 | 4.2:-32672682 | MS.gene28988:CDS |
| GAGGAGATGGCACTGTCCTA+TGG | 0.419569 | 4.2:-32674574 | MS.gene28988:CDS |
| TCCAAGAGACCCTAAAGAAA+AGG | 0.423735 | 4.2:+32673749 | None:intergenic |
| AAATACCTTTCTGAGCATCT+TGG | 0.428311 | 4.2:+32676343 | None:intergenic |
| CCAAGAGACCCTAAAGAAAA+GGG | 0.433750 | 4.2:+32673750 | None:intergenic |
| ATTCCAGATCTCTTTGAAAT+GGG | 0.437686 | 4.2:-32675584 | MS.gene28988:intron |
| TATATAAAGTTGAAGCTAAC+GGG | 0.441430 | 4.2:-32676442 | MS.gene28988:CDS |
| GAAAATCATGCCTTGAGCAT+TGG | 0.443264 | 4.2:-32676514 | MS.gene28988:CDS |
| TCTGCATGGGCGTCATTTGA+TGG | 0.444185 | 4.2:-32672812 | MS.gene28988:CDS |
| ATATAATGTGGTTTGTTTGG+CGG | 0.445641 | 4.2:+32676460 | None:intergenic |
| CTCATATTTACGTTTCCATT+CGG | 0.448735 | 4.2:+32677198 | None:intergenic |
| TTTGGCAGCTGGAGGATCAA+TGG | 0.451281 | 4.2:-32673341 | MS.gene28988:CDS |
| CCATGACAAGCCGTAGGAAC+AGG | 0.452096 | 4.2:+32672731 | None:intergenic |
| ACCCGTAAAGCCACATGCTC+TGG | 0.457414 | 4.2:+32672860 | None:intergenic |
| GGCCCTTTAAAATTGATTCA+AGG | 0.464517 | 4.2:+32673593 | None:intergenic |
| GCCCCATTAGTATTACATTA+CGG | 0.471359 | 4.2:-32673573 | MS.gene28988:CDS |
| TCAATATGAGCACCGTCTGT+GGG | 0.476528 | 4.2:+32675554 | None:intergenic |
| GCGAGATTGTCATGCTTCAC+GGG | 0.478288 | 4.2:+32672628 | None:intergenic |
| GGCACCCTGGCCTGTTCCTA+CGG | 0.479828 | 4.2:-32672741 | MS.gene28988:CDS |
| AGCTTCAACTTTATATAATG+TGG | 0.480008 | 4.2:+32676448 | None:intergenic |
| ACTGCATATTCTTTGGCAGC+TGG | 0.480334 | 4.2:-32673352 | MS.gene28988:CDS |
| CTGATTTCCTTCATGGAACA+GGG | 0.487223 | 4.2:-32677543 | None:intergenic |
| AGCGAGATTGTCATGCTTCA+CGG | 0.498575 | 4.2:+32672627 | None:intergenic |
| GTCACACGTGTGCAAGGGGA+TGG | 0.499730 | 4.2:-32673403 | MS.gene28988:CDS |
| AATTGGGGTTTCCATTCCTA+AGG | 0.501829 | 4.2:+32676372 | None:intergenic |
| TCCTTTGTCACACGTGTGCA+AGG | 0.504294 | 4.2:-32673409 | MS.gene28988:CDS |
| ATATGTGGAACCACGTGTCC+AGG | 0.505262 | 4.2:-32675074 | MS.gene28988:CDS |
| TTCTGTGTGCTGAAATGATT+AGG | 0.505327 | 4.2:-32675504 | MS.gene28988:intron |
| GTCAATATGAGCACCGTCTG+TGG | 0.508326 | 4.2:+32675553 | None:intergenic |
| CTGCAAACCAATGCATCTCC+TGG | 0.509619 | 4.2:+32672767 | None:intergenic |
| TCCCATGACGTCCTTAGGAA+TGG | 0.510150 | 4.2:-32676383 | MS.gene28988:CDS |
| CTCAAGCTGAGGCTGCCGAA+TGG | 0.510339 | 4.2:-32677213 | MS.gene28988:CDS |
| GTGACGTCGCAGGCTGAGAA+TGG | 0.510604 | 4.2:-32677510 | MS.gene28988:CDS |
| CGTCATTTGATGGCAAAGAC+AGG | 0.513709 | 4.2:-32672802 | MS.gene28988:CDS |
| TGGTTTGCAGCATGGCACCC+TGG | 0.513901 | 4.2:-32672754 | MS.gene28988:CDS |
| ATTCAGAGAACTCTATAAGA+TGG | 0.515452 | 4.2:+32677409 | None:intergenic |
| AGCAGAGCGCAGTAGTAAGC+AGG | 0.517230 | 4.2:-32675769 | MS.gene28988:intron |
| ATGGAAACGTAAATATGAGT+TGG | 0.518720 | 4.2:-32677194 | MS.gene28988:CDS |
| AATATGAGTTGGAGCGGACA+CGG | 0.519631 | 4.2:-32677183 | MS.gene28988:CDS |
| AGGATCAATGGTCCATCCTC+AGG | 0.522080 | 4.2:-32673329 | MS.gene28988:intron |
| TAAGAAACTACAAGTATATG+TGG | 0.523520 | 4.2:-32675089 | MS.gene28988:CDS |
| GCAGATCCTCTGCTATTGAA+TGG | 0.526265 | 4.2:+32672830 | None:intergenic |
| GTTAGCACCAGGAGATGCAT+TGG | 0.526664 | 4.2:-32672774 | MS.gene28988:CDS |
| AAACTTCAATGGTGCTGCAA+AGG | 0.526729 | 4.2:-32675852 | MS.gene28988:CDS |
| AAGGGGACAATAGGAGGCAC+TGG | 0.531100 | 4.2:+32673768 | None:intergenic |
| GTGATAACTCTTGGAGGAGA+TGG | 0.532119 | 4.2:-32674587 | MS.gene28988:CDS |
| TTCCATTCCTAAGGACGTCA+TGG | 0.534502 | 4.2:+32676381 | None:intergenic |
| ACAAGCCGTAGGAACAGGCC+AGG | 0.537381 | 4.2:+32672736 | None:intergenic |
| CCTGTTCCTACGGCTTGTCA+TGG | 0.541901 | 4.2:-32672731 | MS.gene28988:CDS |
| GACCTTGTGATAACTCTTGG+AGG | 0.543147 | 4.2:-32674593 | MS.gene28988:CDS |
| AGGAGATGGCACTGTCCTAT+GGG | 0.543589 | 4.2:-32674573 | MS.gene28988:intron |
| AGATGCATTGGTTTGCAGCA+TGG | 0.544167 | 4.2:-32672762 | MS.gene28988:CDS |
| GGCCTAAAAGATAGGGAATG+TGG | 0.546385 | 4.2:+32672893 | None:intergenic |
| AGTCTGAAGAATGTTATTCA+AGG | 0.548385 | 4.2:-32676418 | MS.gene28988:CDS |
| GAAGAATGTTATTCAAGGAA+TGG | 0.548576 | 4.2:-32676413 | MS.gene28988:CDS |
| TAGCCGTCGCAAAGACCCTA+AGG | 0.549728 | 4.2:-32677261 | MS.gene28988:CDS |
| TTATCATTCTCAGATGGTTG+AGG | 0.555430 | 4.2:-32675117 | MS.gene28988:intron |
| TATCAGTGGCCTAAAAGATA+GGG | 0.556872 | 4.2:+32672886 | None:intergenic |
| TCCATTCCTAAGGACGTCAT+GGG | 0.556880 | 4.2:+32676382 | None:intergenic |
| AAAGAAAAGGGGACAATAGG+AGG | 0.560184 | 4.2:+32673762 | None:intergenic |
| ACTTTAACTTTGTAGAAACA+TGG | 0.561034 | 4.2:-32675027 | MS.gene28988:CDS |
| CTTCTTCAATTACCAATCCA+GGG | 0.562191 | 4.2:-32677441 | MS.gene28988:CDS |
| TTCAAGAAAGTACCTGAGGA+TGG | 0.571238 | 4.2:+32673317 | None:intergenic |
| CCTTTGTCACACGTGTGCAA+GGG | 0.572743 | 4.2:-32673408 | MS.gene28988:CDS |
| GCATATTCTTTGGCAGCTGG+AGG | 0.576402 | 4.2:-32673349 | MS.gene28988:CDS |
| AAATTCGAGTGTGACGTCGC+AGG | 0.576930 | 4.2:-32677520 | MS.gene28988:CDS |
| CAAGATCAGCCCAATGCTCA+AGG | 0.577105 | 4.2:+32676504 | None:intergenic |
| CAAAGAATATGCAGTACTGC+CGG | 0.577407 | 4.2:+32673360 | None:intergenic |
| CCCTTGCACACGTGTGACAA+AGG | 0.578224 | 4.2:+32673408 | None:intergenic |
| GTATAACATGACATATCAAA+CGG | 0.579333 | 4.2:+32673548 | None:intergenic |
| TTTCCTTAGGGTCTTTGCGA+CGG | 0.579721 | 4.2:+32677258 | None:intergenic |
| TTATATAAAGTTGAAGCTAA+CGG | 0.582757 | 4.2:-32676443 | MS.gene28988:CDS |
| TGATTCCAAGATGCTCAGAA+AGG | 0.584205 | 4.2:-32676348 | MS.gene28988:intron |
| CTTCTTGCACAGCATTCATG+AGG | 0.584282 | 4.2:-32672693 | MS.gene28988:CDS |
| CTTTGTCACACGTGTGCAAG+GGG | 0.585437 | 4.2:-32673407 | MS.gene28988:CDS |
| GACAGGAAACAGTTAGCACC+AGG | 0.587740 | 4.2:-32672785 | MS.gene28988:CDS |
| TAAGATGGTCATCAGAACCC+TGG | 0.595252 | 4.2:+32677424 | None:intergenic |
| TTTGTAGAAACATGGAGTGA+TGG | 0.596829 | 4.2:-32675019 | MS.gene28988:intron |
| AAAAGCTGCTGCTCAAGCTG+AGG | 0.596980 | 4.2:-32677224 | MS.gene28988:CDS |
| CAGACAGCATCTATGTTCAA+AGG | 0.597231 | 4.2:-32673792 | MS.gene28988:CDS |
| TGGTCATCAGAACCCTGGAT+TGG | 0.600554 | 4.2:+32677429 | None:intergenic |
| ACTCCTCCAGAAGATCGACC+TGG | 0.600736 | 4.2:+32675056 | None:intergenic |
| GCCTAAAAGATAGGGAATGT+GGG | 0.606323 | 4.2:+32672894 | None:intergenic |
| CTTACTACTGCGCTCTGCTG+TGG | 0.613186 | 4.2:+32675773 | None:intergenic |
| CAAATACCATTCAATAGCAG+AGG | 0.614625 | 4.2:-32672836 | MS.gene28988:CDS |
| AACGTAAATATGAGTTGGAG+CGG | 0.620635 | 4.2:-32677189 | MS.gene28988:CDS |
| CAAGCCGTAGGAACAGGCCA+GGG | 0.621041 | 4.2:+32672737 | None:intergenic |
| ACCCTAAGGAAAGTTGCTGA+AGG | 0.622618 | 4.2:-32677247 | MS.gene28988:CDS |
| TCAATAGCAGAGGATCTGCA+TGG | 0.622946 | 4.2:-32672826 | MS.gene28988:CDS |
| CTCCTCCAAGAGTTATCACA+AGG | 0.626125 | 4.2:+32674591 | None:intergenic |
| TTCTTGCACAGCATTCATGA+GGG | 0.628470 | 4.2:-32672692 | MS.gene28988:CDS |
| GCATCTTGGAATCAGAATTG+GGG | 0.632152 | 4.2:+32676357 | None:intergenic |
| CAATAGCAGAGGATCTGCAT+GGG | 0.633440 | 4.2:-32672825 | MS.gene28988:CDS |
| AGTAACATTCCAAATTTGTG+AGG | 0.633691 | 4.2:+32673440 | None:intergenic |
| CAATATGAGCACCGTCTGTG+GGG | 0.637061 | 4.2:+32675555 | None:intergenic |
| ACATGCTCTGGTAATATCAG+TGG | 0.641766 | 4.2:+32672872 | None:intergenic |
| ATCTATACTTGTTCTAAACG+AGG | 0.643745 | 4.2:-32673491 | MS.gene28988:CDS |
| ACTGATATTACCAGAGCATG+TGG | 0.644043 | 4.2:-32672870 | MS.gene28988:CDS |
| TGTCCAGGTCGATCTTCTGG+AGG | 0.648734 | 4.2:-32675059 | MS.gene28988:CDS |
| AACGAGGTTACTATTGATCG+TGG | 0.656515 | 4.2:-32673475 | MS.gene28988:CDS |
| AATATGAGCACCGTCTGTGG+GGG | 0.658209 | 4.2:+32675556 | None:intergenic |
| GAATCTCCATGACAAGCCGT+AGG | 0.661516 | 4.2:+32672725 | None:intergenic |
| GCCGTAATGTAATACTAATG+GGG | 0.664160 | 4.2:+32673572 | None:intergenic |
| AGAAGATCGACCTGGACACG+TGG | 0.664253 | 4.2:+32675064 | None:intergenic |
| CAAGAGACCCTAAAGAAAAG+GGG | 0.665932 | 4.2:+32673751 | None:intergenic |
| CGAGATTGTCATGCTTCACG+GGG | 0.669838 | 4.2:+32672629 | None:intergenic |
| ATTGGCGTAAACAAAATACC+CGG | 0.685864 | 4.2:+32672920 | None:intergenic |
| AATCTGCAGATCGAAAACAA+AGG | 0.765104 | 4.2:-32677160 | MS.gene28988:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCATCATAAAATTAAAAA+AGG | + | chr4.2:32676182-32676201 | None:intergenic | 10.0% |
| !! | ATTACTATATAATATTGTAT+CGG | + | chr4.2:32674105-32674124 | None:intergenic | 10.0% |
| !! | AAAATAAACAAAATAGTGAA+TGG | - | chr4.2:32675369-32675388 | MS.gene28988:intron | 15.0% |
| !! | AAATGATTGAAATGAATAAA+CGG | + | chr4.2:32673213-32673232 | None:intergenic | 15.0% |
| !! | ATTAAAGATAAATTGCTTAT+AGG | - | chr4.2:32673275-32673294 | MS.gene28988:intron | 15.0% |
| !! | TAAAAAAAAATATACGTCTA+AGG | + | chr4.2:32677078-32677097 | None:intergenic | 15.0% |
| !!! | TAATTTTGTCATCTAAAATA+TGG | - | chr4.2:32675682-32675701 | MS.gene28988:intron | 15.0% |
| !!! | TTTTAAAATATCCTATTGAA+TGG | - | chr4.2:32675630-32675649 | MS.gene28988:intron | 15.0% |
| !! | AAAAAAATACCAATTAACCA+AGG | + | chr4.2:32675029-32675048 | None:intergenic | 20.0% |
| !! | AAAAAATACCAATTAACCAA+GGG | + | chr4.2:32675028-32675047 | None:intergenic | 20.0% |
| !! | AAGCAATTTATCTTTAATAC+AGG | + | chr4.2:32673273-32673292 | None:intergenic | 20.0% |
| !! | AATTATGTATATGCATGATT+CGG | + | chr4.2:32675960-32675979 | None:intergenic | 20.0% |
| !! | ATATCACAAAGCAATATATT+AGG | + | chr4.2:32676326-32676345 | None:intergenic | 20.0% |
| !! | ATATCTGTTTACATTTCTAT+TGG | - | chr4.2:32676506-32676525 | MS.gene28988:CDS | 20.0% |
| !! | ATTAAAAAGAAAAAATCGAC+CGG | + | chr4.2:32673185-32673204 | None:intergenic | 20.0% |
| !! | CAAATATTTGATGTCATAAA+AGG | - | chr4.2:32675180-32675199 | MS.gene28988:intron | 20.0% |
| !! | TTATACTAAAGACAAATACT+TGG | + | chr4.2:32674953-32674972 | None:intergenic | 20.0% |
| !! | TTATATAAAGTTGAAGCTAA+CGG | - | chr4.2:32673725-32673744 | MS.gene28988:intron | 20.0% |
| !! | TTGAAAAATTCAACAGAAAA+AGG | + | chr4.2:32673486-32673505 | None:intergenic | 20.0% |
| !!! | AAATATTTAAGAGTACCAAT+AGG | + | chr4.2:32673911-32673930 | None:intergenic | 20.0% |
| !!! | AATATTTAAGAGTACCAATA+GGG | + | chr4.2:32673910-32673929 | None:intergenic | 20.0% |
| !!! | GAAGAAATGAAAGATTTTAA+CGG | + | chr4.2:32673418-32673437 | None:intergenic | 20.0% |
| !!! | GAAGTAACATTTTTAATGTT+GGG | - | chr4.2:32676149-32676168 | MS.gene28988:intron | 20.0% |
| !!! | TTAATTTTATCTACAACATC+CGG | - | chr4.2:32676789-32676808 | MS.gene28988:intron | 20.0% |
| !!! | TTACTCATAAGATTTTAACA+TGG | - | chr4.2:32677095-32677114 | MS.gene28988:intron | 20.0% |
| !!! | TTTAATTTTATGATGATTGC+TGG | - | chr4.2:32676184-32676203 | MS.gene28988:intron | 20.0% |
| !!! | TTTATATAATGTGGTTTGTT+TGG | + | chr4.2:32673714-32673733 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATCATTCTCAGA+TGG | - | chr4.2:32675045-32675064 | MS.gene28988:CDS | 20.0% |
| ! | AAAGGAATAAAACTTGACTT+TGG | + | chr4.2:32674731-32674750 | None:intergenic | 25.0% |
| ! | AAATATAGCTAATTACCATG+AGG | + | chr4.2:32674217-32674236 | None:intergenic | 25.0% |
| ! | AAGCAATATATTAGGATAAC+CGG | + | chr4.2:32676318-32676337 | None:intergenic | 25.0% |
| ! | AATATAGCTAATTACCATGA+GGG | + | chr4.2:32674216-32674235 | None:intergenic | 25.0% |
| ! | AGCATCATAACATAAGTAAA+AGG | + | chr4.2:32674749-32674768 | None:intergenic | 25.0% |
| ! | AGCTTCAACTTTATATAATG+TGG | + | chr4.2:32673723-32673742 | None:intergenic | 25.0% |
| ! | AGTAAACAGTAAACTTTCTT+TGG | + | chr4.2:32675395-32675414 | None:intergenic | 25.0% |
| ! | AGTTAACTATCTGATTATAG+TGG | - | chr4.2:32675480-32675499 | MS.gene28988:intron | 25.0% |
| ! | ATGCACATAAACAATTACAA+CGG | + | chr4.2:32675506-32675525 | None:intergenic | 25.0% |
| ! | ATTATGACACTAAAACTGTA+AGG | + | chr4.2:32677157-32677176 | None:intergenic | 25.0% |
| ! | CTATGCATTGAGATAATATA+TGG | - | chr4.2:32675907-32675926 | MS.gene28988:intron | 25.0% |
| ! | GAAATGTACATAACCTTAAA+AGG | - | chr4.2:32676106-32676125 | MS.gene28988:intron | 25.0% |
| ! | GAGATAATATATGGTAGATT+AGG | - | chr4.2:32675916-32675935 | MS.gene28988:intron | 25.0% |
| ! | GAGTATTCATTGTTAAACTT+TGG | - | chr4.2:32676252-32676271 | MS.gene28988:intron | 25.0% |
| ! | TAAAAAGAGTTAGTTACTTG+TGG | + | chr4.2:32675775-32675794 | None:intergenic | 25.0% |
| ! | TAAGAAACTACAAGTATATG+TGG | - | chr4.2:32675079-32675098 | MS.gene28988:CDS | 25.0% |
| ! | TATATAAAGTTGAAGCTAAC+GGG | - | chr4.2:32673726-32673745 | MS.gene28988:intron | 25.0% |
| ! | TCATTATGTTAAAACAGACA+AGG | + | chr4.2:32675418-32675437 | None:intergenic | 25.0% |
| ! | TTTACTTTACATTACTCAAC+CGG | - | chr4.2:32676296-32676315 | MS.gene28988:intron | 25.0% |
| !! | AAATAATGGAAGATGTGTAA+TGG | - | chr4.2:32674793-32674812 | MS.gene28988:intron | 25.0% |
| !! | ACTTTAACTTTGTAGAAACA+TGG | - | chr4.2:32675141-32675160 | MS.gene28988:intron | 25.0% |
| !! | AGGTATCTCTTTTATTATTG+AGG | - | chr4.2:32674419-32674438 | MS.gene28988:intron | 25.0% |
| !! | GGAAGTAACATTTTTAATGT+TGG | - | chr4.2:32676148-32676167 | MS.gene28988:intron | 25.0% |
| !! | TAACATATTTTGCTTCGATA+AGG | + | chr4.2:32673859-32673878 | None:intergenic | 25.0% |
| !! | TATCTCTTTTATTATTGAGG+AGG | - | chr4.2:32674422-32674441 | MS.gene28988:intron | 25.0% |
| !! | TCATATCAAATGTCCTTTTA+AGG | + | chr4.2:32676122-32676141 | None:intergenic | 25.0% |
| !! | TGCCTTGAATCAATTTTAAA+GGG | - | chr4.2:32676573-32676592 | MS.gene28988:intron | 25.0% |
| !! | TTCTTTTACAGTCAATATTG+CGG | - | chr4.2:32673089-32673108 | MS.gene28988:intron | 25.0% |
| !! | TTGTAATTTTCACTATCTGA+AGG | + | chr4.2:32676549-32676568 | None:intergenic | 25.0% |
| !! | TTGTAGATAAGGAAATTTTG+AGG | - | chr4.2:32675537-32675556 | MS.gene28988:CDS | 25.0% |
| !!! | AGATTTTAACATGGAAATTC+TGG | - | chr4.2:32677104-32677123 | MS.gene28988:intron | 25.0% |
| !!! | ATTTTAACTGAATCCGAATT+TGG | + | chr4.2:32674645-32674664 | None:intergenic | 25.0% |
| !!! | CAATTTTTTGCTTGTAGATA+AGG | - | chr4.2:32675526-32675545 | MS.gene28988:CDS | 25.0% |
| !!! | CGATTGTTTTTAATGAGATA+AGG | + | chr4.2:32674049-32674068 | None:intergenic | 25.0% |
| !!! | GTATCATTACAAGTTTTTTC+TGG | - | chr4.2:32676985-32677004 | MS.gene28988:intron | 25.0% |
| !!! | TTTTTCTAGTGCTATATTTG+TGG | - | chr4.2:32675291-32675310 | MS.gene28988:intron | 25.0% |
| AAACAATCGAGAGATATAAG+TGG | - | chr4.2:32674060-32674079 | MS.gene28988:intron | 30.0% | |
| AAACAATTTCACATACCCAT+AGG | + | chr4.2:32675613-32675632 | None:intergenic | 30.0% | |
| AAACACATTAGCAGTTTAGA+TGG | + | chr4.2:32673573-32673592 | None:intergenic | 30.0% | |
| AAAGGACATTTGATATGAGA+TGG | - | chr4.2:32676124-32676143 | MS.gene28988:intron | 30.0% | |
| AAATACTTGGAAGGATACAA+AGG | + | chr4.2:32674940-32674959 | None:intergenic | 30.0% | |
| AATTTAAGAGTGAACAAGAG+AGG | - | chr4.2:32675731-32675750 | MS.gene28988:intron | 30.0% | |
| ACTAAAGACAAATACTTGGA+AGG | + | chr4.2:32674949-32674968 | None:intergenic | 30.0% | |
| AGGAGTTTCAAGACAAAATA+AGG | + | chr4.2:32672882-32672901 | None:intergenic | 30.0% | |
| AGTAACATTCCAAATTTGTG+AGG | + | chr4.2:32676731-32676750 | None:intergenic | 30.0% | |
| AGTCTGAAGAATGTTATTCA+AGG | - | chr4.2:32673750-32673769 | MS.gene28988:CDS | 30.0% | |
| AGTTTATAATTTCTACTCCC+TGG | - | chr4.2:32673616-32673635 | MS.gene28988:CDS | 30.0% | |
| ATACAATTATGCGAAGTTGA+AGG | + | chr4.2:32676465-32676484 | None:intergenic | 30.0% | |
| ATAGAGTATATATCGACACA+AGG | + | chr4.2:32675335-32675354 | None:intergenic | 30.0% | |
| ATCATCTTACCTCACAAATT+TGG | - | chr4.2:32676719-32676738 | MS.gene28988:intron | 30.0% | |
| ATGCGACAAACATCAATAAA+AGG | + | chr4.2:32673971-32673990 | None:intergenic | 30.0% | |
| ATGGAAACGTAAATATGAGT+TGG | - | chr4.2:32672974-32672993 | MS.gene28988:intron | 30.0% | |
| ATTCAGAGAACTCTATAAGA+TGG | + | chr4.2:32672762-32672781 | None:intergenic | 30.0% | |
| CATATTGACCAAACCAAATT+CGG | - | chr4.2:32674629-32674648 | MS.gene28988:intron | 30.0% | |
| CTCATATTTACGTTTCCATT+CGG | + | chr4.2:32672973-32672992 | None:intergenic | 30.0% | |
| CTGAAAACTATTTGATTCCT+GGG | - | chr4.2:32676023-32676042 | MS.gene28988:intron | 30.0% | |
| GAAAATATAAAGATAGCACG+AGG | + | chr4.2:32674516-32674535 | None:intergenic | 30.0% | |
| GAAGAATGTTATTCAAGGAA+TGG | - | chr4.2:32673755-32673774 | MS.gene28988:CDS | 30.0% | |
| GGTCAAAATATATCTGTCTT+TGG | - | chr4.2:32676230-32676249 | MS.gene28988:intron | 30.0% | |
| TACAAAATCAATCATCGAAG+TGG | + | chr4.2:32673054-32673073 | None:intergenic | 30.0% | |
| TAGATGGTAGATCAATATTC+AGG | + | chr4.2:32673557-32673576 | None:intergenic | 30.0% | |
| TAGATTAGGAACCATGTTAA+AGG | - | chr4.2:32675930-32675949 | MS.gene28988:intron | 30.0% | |
| TGCCGTAATGTAATACTAAT+GGG | + | chr4.2:32676600-32676619 | None:intergenic | 30.0% | |
| TGCGACAAACATCAATAAAA+GGG | + | chr4.2:32673970-32673989 | None:intergenic | 30.0% | |
| TTAGACTATTGCCATTCAAT+AGG | + | chr4.2:32675644-32675663 | None:intergenic | 30.0% | |
| TTAGACTCTTCGCAAAATAA+TGG | - | chr4.2:32674779-32674798 | MS.gene28988:intron | 30.0% | |
| ! | AATTTTCACTATCTGAAGGA+AGG | + | chr4.2:32676545-32676564 | None:intergenic | 30.0% |
| ! | ACTAGAAAAAAAAGCTCTAG+TGG | + | chr4.2:32675281-32675300 | None:intergenic | 30.0% |
| ! | AGGCTTCTTTTAAACTTCAA+TGG | - | chr4.2:32674305-32674324 | MS.gene28988:intron | 30.0% |
| ! | ATCGTCTGAAAACGATTTTA+TGG | - | chr4.2:32673358-32673377 | MS.gene28988:CDS | 30.0% |
| ! | ATCTATACTTGTTCTAAACG+AGG | - | chr4.2:32676677-32676696 | MS.gene28988:intron | 30.0% |
| ! | GTGCCTTGAATCAATTTTAA+AGG | - | chr4.2:32676572-32676591 | MS.gene28988:intron | 30.0% |
| ! | TATTCCAGATCTCTTTGAAA+TGG | - | chr4.2:32674583-32674602 | MS.gene28988:CDS | 30.0% |
| ! | TCTTTTACAGTCAATATTGC+GGG | - | chr4.2:32673090-32673109 | MS.gene28988:intron | 30.0% |
| ! | TTGTCACGATCTTATCTTTT+AGG | - | chr4.2:32673520-32673539 | MS.gene28988:CDS | 30.0% |
| !! | ATATAATGTGGTTTGTTTGG+CGG | + | chr4.2:32673711-32673730 | None:intergenic | 30.0% |
| !! | ATTATTTTGCGAAGAGTCTA+AGG | + | chr4.2:32674780-32674799 | None:intergenic | 30.0% |
| !! | ATTCCAGATCTCTTTGAAAT+GGG | - | chr4.2:32674584-32674603 | MS.gene28988:CDS | 30.0% |
| !! | GCTATTAAATTGTCGATTTC+CGG | - | chr4.2:32673163-32673182 | MS.gene28988:intron | 30.0% |
| !!! | AGATATATTTTGACCAGAGA+TGG | + | chr4.2:32676225-32676244 | None:intergenic | 30.0% |
| AAAACTAATCCATACCCTCA+TGG | - | chr4.2:32674199-32674218 | MS.gene28988:intron | 35.0% | |
| AAAATCATGCCTTGAGCATT+GGG | - | chr4.2:32673655-32673674 | MS.gene28988:intron | 35.0% | |
| AAATACCTTTCTGAGCATCT+TGG | + | chr4.2:32673828-32673847 | None:intergenic | 35.0% | |
| AACTGAATCCGAATTTGGTT+TGG | + | chr4.2:32674640-32674659 | None:intergenic | 35.0% | |
| AATCTGCAGATCGAAAACAA+AGG | - | chr4.2:32673008-32673027 | MS.gene28988:intron | 35.0% | |
| ACACATGTGTGTACAATAGA+AGG | + | chr4.2:32674538-32674557 | None:intergenic | 35.0% | |
| ACATGTGAACAGCAAAACAA+CGG | + | chr4.2:32677014-32677033 | None:intergenic | 35.0% | |
| AGCATCTTGGAATCAGAATT+GGG | + | chr4.2:32673815-32673834 | None:intergenic | 35.0% | |
| ATATCAGTGGCCTAAAAGAT+AGG | + | chr4.2:32677286-32677305 | None:intergenic | 35.0% | |
| ATCGACAATTTAATAGCGAG+CGG | + | chr4.2:32673160-32673179 | None:intergenic | 35.0% | |
| ATTGGCGTAAACAAAATACC+CGG | + | chr4.2:32677251-32677270 | None:intergenic | 35.0% | |
| CAAATACCATTCAATAGCAG+AGG | - | chr4.2:32677332-32677351 | MS.gene28988:intron | 35.0% | |
| CAGGTACAGTAATGTTGAAT+TGG | + | chr4.2:32674269-32674288 | None:intergenic | 35.0% | |
| CTTCTTCAATTACCAATCCA+GGG | - | chr4.2:32672727-32672746 | MS.gene28988:CDS | 35.0% | |
| GCCCCATTAGTATTACATTA+CGG | - | chr4.2:32676595-32676614 | MS.gene28988:intron | 35.0% | |
| GCCGTAATGTAATACTAATG+GGG | + | chr4.2:32676599-32676618 | None:intergenic | 35.0% | |
| GCTGAAAACTATTTGATTCC+TGG | - | chr4.2:32676022-32676041 | MS.gene28988:intron | 35.0% | |
| GTAAACTACTGTAGTAGACT+TGG | + | chr4.2:32676281-32676300 | None:intergenic | 35.0% | |
| GTGCCGTAATGTAATACTAA+TGG | + | chr4.2:32676601-32676620 | None:intergenic | 35.0% | |
| TATCAGTGGCCTAAAAGATA+GGG | + | chr4.2:32677285-32677304 | None:intergenic | 35.0% | |
| TCCTGTAGTAAAAACATCCA+GGG | + | chr4.2:32673636-32673655 | None:intergenic | 35.0% | |
| TCTTTATGACCTTGTGTTAC+TGG | - | chr4.2:32677046-32677065 | MS.gene28988:intron | 35.0% | |
| TGGCAATAGTCTAACTTTCT+AGG | - | chr4.2:32675650-32675669 | MS.gene28988:intron | 35.0% | |
| TGTACCTGACTTATTTACTG+AGG | - | chr4.2:32674281-32674300 | MS.gene28988:intron | 35.0% | |
| TTATCATTCTCAGATGGTTG+AGG | - | chr4.2:32675051-32675070 | MS.gene28988:CDS | 35.0% | |
| TTCACAGTAAAACAGATCTG+CGG | + | chr4.2:32675847-32675866 | None:intergenic | 35.0% | |
| TTCCTGTAGTAAAAACATCC+AGG | + | chr4.2:32673637-32673656 | None:intergenic | 35.0% | |
| TTCTGTGTGCTGAAATGATT+AGG | - | chr4.2:32674664-32674683 | MS.gene28988:intron | 35.0% | |
| TTTGTAGAAACATGGAGTGA+TGG | - | chr4.2:32675149-32675168 | MS.gene28988:intron | 35.0% | |
| ! | AAAAGTGTAACCTTCAACAG+TGG | + | chr4.2:32675819-32675838 | None:intergenic | 35.0% |
| ! | AACGTAAATATGAGTTGGAG+CGG | - | chr4.2:32672979-32672998 | MS.gene28988:intron | 35.0% |
| ! | ACAGTGGTTTGGATAAGTAA+CGG | + | chr4.2:32675803-32675822 | None:intergenic | 35.0% |
| ! | ACGAGGACAAACTTTAAGAA+GGG | + | chr4.2:32674499-32674518 | None:intergenic | 35.0% |
| ! | ATGATCAATTTTGTTGCAGC+AGG | - | chr4.2:32673881-32673900 | MS.gene28988:intron | 35.0% |
| ! | CTATTGTCCCCTTTTCTTTA+GGG | - | chr4.2:32676410-32676429 | MS.gene28988:CDS | 35.0% |
| ! | TTTTCTCTGATGTACATGTG+TGG | - | chr4.2:32673929-32673948 | MS.gene28988:intron | 35.0% |
| !! | GACATTGTCTCTTTTGAAAG+AGG | - | chr4.2:32674364-32674383 | MS.gene28988:intron | 35.0% |
| !! | GGCCCTTTAAAATTGATTCA+AGG | + | chr4.2:32676578-32676597 | None:intergenic | 35.0% |
| !!! | GGTATGGATTAGTTTTTGGT+AGG | + | chr4.2:32674195-32674214 | None:intergenic | 35.0% |
| !!! | GTTTTGCTGTTCACATGTTA+TGG | - | chr4.2:32677016-32677035 | MS.gene28988:intron | 35.0% |
| !!! | TGAGGGTATGGATTAGTTTT+TGG | + | chr4.2:32674199-32674218 | None:intergenic | 35.0% |
| !!! | TGGATTAGTTTTTGGTAGGA+CGG | + | chr4.2:32674191-32674210 | None:intergenic | 35.0% |
| AAAGAAAAGGGGACAATAGG+AGG | + | chr4.2:32676409-32676428 | None:intergenic | 40.0% | |
| AACGAGGTTACTATTGATCG+TGG | - | chr4.2:32676693-32676712 | MS.gene28988:intron | 40.0% | |
| AATTGGGGTTTCCATTCCTA+AGG | + | chr4.2:32673799-32673818 | None:intergenic | 40.0% | |
| AATTTAATAGCGAGCGGCAT+TGG | + | chr4.2:32673154-32673173 | None:intergenic | 40.0% | |
| ACATGCTCTGGTAATATCAG+TGG | + | chr4.2:32677299-32677318 | None:intergenic | 40.0% | |
| ACTCCCATTTCAAAGAGATC+TGG | + | chr4.2:32674590-32674609 | None:intergenic | 40.0% | |
| ACTGATATTACCAGAGCATG+TGG | - | chr4.2:32677298-32677317 | MS.gene28988:intron | 40.0% | |
| AGCTAATTACCATGAGGGTA+TGG | + | chr4.2:32674211-32674230 | None:intergenic | 40.0% | |
| AGGGTTGACATGAAGCAAAA+AGG | + | chr4.2:32675009-32675028 | None:intergenic | 40.0% | |
| AGGTATCATCCAGTAACACA+AGG | + | chr4.2:32677058-32677077 | None:intergenic | 40.0% | |
| AGTCAATATTGCGGGAGAAA+CGG | - | chr4.2:32673098-32673117 | MS.gene28988:intron | 40.0% | |
| ATACAAAGGCTGAGGATAGA+TGG | + | chr4.2:32674926-32674945 | None:intergenic | 40.0% | |
| ATAGATGCTGTCTGCACATT+TGG | + | chr4.2:32676370-32676389 | None:intergenic | 40.0% | |
| CAAAGAATATGCAGTACTGC+CGG | + | chr4.2:32676811-32676830 | None:intergenic | 40.0% | |
| CAAGAGACCCTAAAGAAAAG+GGG | + | chr4.2:32676420-32676439 | None:intergenic | 40.0% | |
| CAGACAGCATCTATGTTCAA+AGG | - | chr4.2:32676376-32676395 | MS.gene28988:CDS | 40.0% | |
| CATCATTTACTTAAGTGCCC+AGG | + | chr4.2:32676043-32676062 | None:intergenic | 40.0% | |
| CATGTCAACCCTTGGTTAAT+TGG | - | chr4.2:32675017-32675036 | MS.gene28988:intron | 40.0% | |
| CATGTGAACAGCAAAACAAC+GGG | + | chr4.2:32677013-32677032 | None:intergenic | 40.0% | |
| CCAAGAGACCCTAAAGAAAA+GGG | + | chr4.2:32676421-32676440 | None:intergenic | 40.0% | |
| CCTAAAGAAAAGGGGACAAT+AGG | + | chr4.2:32676412-32676431 | None:intergenic | 40.0% | |
| CGAAGTTGAAGGATACAGAA+AGG | + | chr4.2:32676454-32676473 | None:intergenic | 40.0% | |
| CTTATCCAAACCACTGTTGA+AGG | - | chr4.2:32675806-32675825 | MS.gene28988:CDS | 40.0% | |
| GAAAATCATGCCTTGAGCAT+TGG | - | chr4.2:32673654-32673673 | MS.gene28988:intron | 40.0% | |
| GAGCATCTTGGAATCAGAAT+TGG | + | chr4.2:32673816-32673835 | None:intergenic | 40.0% | |
| GATAGTACTTGCACAGTCAT+CGG | + | chr4.2:32674154-32674173 | None:intergenic | 40.0% | |
| GATTCGGACTTCCTTTAACA+TGG | + | chr4.2:32675944-32675963 | None:intergenic | 40.0% | |
| GCATCTTGGAATCAGAATTG+GGG | + | chr4.2:32673814-32673833 | None:intergenic | 40.0% | |
| GCCTAAAAGATAGGGAATGT+GGG | + | chr4.2:32677277-32677296 | None:intergenic | 40.0% | |
| GCGAGAAGGTCAGAAAAAAA+TGG | + | chr4.2:32673464-32673483 | None:intergenic | 40.0% | |
| GCTTCTTCAATTACCAATCC+AGG | - | chr4.2:32672726-32672745 | MS.gene28988:CDS | 40.0% | |
| GGACATTTGATATGAGATGG+AGG | - | chr4.2:32676127-32676146 | MS.gene28988:intron | 40.0% | |
| GTCGCATTCAAACATCTGTA+AGG | - | chr4.2:32673984-32674003 | MS.gene28988:intron | 40.0% | |
| GTTAGTTACTTGTGGTGAAC+TGG | + | chr4.2:32675767-32675786 | None:intergenic | 40.0% | |
| GTTGACCTTGTGATAACTCT+TGG | - | chr4.2:32675572-32675591 | MS.gene28988:CDS | 40.0% | |
| TATATCGACACAAGGTTCTC+AGG | + | chr4.2:32675327-32675346 | None:intergenic | 40.0% | |
| TCCAAGAGACCCTAAAGAAA+AGG | + | chr4.2:32676422-32676441 | None:intergenic | 40.0% | |
| TCCTTCAGCAACTTTCCTTA+GGG | + | chr4.2:32672925-32672944 | None:intergenic | 40.0% | |
| TGATTCCAAGATGCTCAGAA+AGG | - | chr4.2:32673820-32673839 | MS.gene28988:intron | 40.0% | |
| TGCACTGCTTTCTCAGAAAA+TGG | + | chr4.2:32672703-32672722 | None:intergenic | 40.0% | |
| TGTAACCTTCAACAGTGGTT+TGG | + | chr4.2:32675814-32675833 | None:intergenic | 40.0% | |
| TTATGATGATTGCTGGACGA+AGG | - | chr4.2:32676191-32676210 | MS.gene28988:intron | 40.0% | |
| TTCAACAGAAAAAGGCGAGA+AGG | + | chr4.2:32673478-32673497 | None:intergenic | 40.0% | |
| TTCCTTCAGCAACTTTCCTT+AGG | + | chr4.2:32672926-32672945 | None:intergenic | 40.0% | |
| TTCGTTTCAACTTCCAACTG+CGG | - | chr4.2:32674844-32674863 | MS.gene28988:intron | 40.0% | |
| TTCTTGCACAGCATTCATGA+GGG | - | chr4.2:32677476-32677495 | MS.gene28988:CDS | 40.0% | |
| ! | AGGAGGATGTTGATAGAACA+TGG | + | chr4.2:32677190-32677209 | None:intergenic | 40.0% |
| ! | CACGAGGACAAACTTTAAGA+AGG | + | chr4.2:32674500-32674519 | None:intergenic | 40.0% |
| ! | CCTATTGTCCCCTTTTCTTT+AGG | - | chr4.2:32676409-32676428 | MS.gene28988:CDS | 40.0% |
| ! | GCAAGTACTATCGTGTTTTG+AGG | - | chr4.2:32674162-32674181 | MS.gene28988:intron | 40.0% |
| ! | TTTTGCTTCATGTCAACCCT+TGG | - | chr4.2:32675009-32675028 | MS.gene28988:intron | 40.0% |
| !! | AAACTTCAATGGTGCTGCAA+AGG | - | chr4.2:32674316-32674335 | MS.gene28988:intron | 40.0% |
| !! | TCCCTGGATGTTTTTACTAC+AGG | - | chr4.2:32673632-32673651 | MS.gene28988:intron | 40.0% |
| !! | TTCAAGAAAGTACCTGAGGA+TGG | + | chr4.2:32676854-32676873 | None:intergenic | 40.0% |
| !!! | TTTGAAGACGGGGTTTTAGA+TGG | + | chr4.2:32677218-32677237 | None:intergenic | 40.0% |
| AACCTGCAGATTTGAAGACG+GGG | + | chr4.2:32677228-32677247 | None:intergenic | 45.0% | |
| ACCCTAAGGAAAGTTGCTGA+AGG | - | chr4.2:32672921-32672940 | MS.gene28988:CDS | 45.0% | |
| ACTGCATATTCTTTGGCAGC+TGG | - | chr4.2:32676816-32676835 | MS.gene28988:intron | 45.0% | |
| AGAAGGGACATGCTTGCTTA+TGG | + | chr4.2:32674483-32674502 | None:intergenic | 45.0% | |
| ATGAAACAATCTGCCGCAGT+TGG | + | chr4.2:32674860-32674879 | None:intergenic | 45.0% | |
| CAATAGCAGAGGATCTGCAT+GGG | - | chr4.2:32677343-32677362 | MS.gene28988:intron | 45.0% | |
| CACATGTGTTGTGCGCTAAT+TGG | - | chr4.2:32674549-32674568 | MS.gene28988:intron | 45.0% | |
| CCTGACTTATTTACTGAGGC+AGG | - | chr4.2:32674285-32674304 | MS.gene28988:intron | 45.0% | |
| CCTGCCTCAGTAAATAAGTC+AGG | + | chr4.2:32674288-32674307 | None:intergenic | 45.0% | |
| CGGCAGTACTGCATATTCTT+TGG | - | chr4.2:32676809-32676828 | MS.gene28988:intron | 45.0% | |
| CTCCTCCAAGAGTTATCACA+AGG | + | chr4.2:32675580-32675599 | None:intergenic | 45.0% | |
| CTTCTTGCACAGCATTCATG+AGG | - | chr4.2:32677475-32677494 | MS.gene28988:CDS | 45.0% | |
| GAACCTGCAGATTTGAAGAC+GGG | + | chr4.2:32677229-32677248 | None:intergenic | 45.0% | |
| GACCTTGTGATAACTCTTGG+AGG | - | chr4.2:32675575-32675594 | MS.gene28988:CDS | 45.0% | |
| GATAGGGAATGTGGGCAAAT+TGG | + | chr4.2:32677269-32677288 | None:intergenic | 45.0% | |
| GCAGATCCTCTGCTATTGAA+TGG | + | chr4.2:32677341-32677360 | None:intergenic | 45.0% | |
| GCATTCATGAGGGTCTTCAT+TGG | - | chr4.2:32677486-32677505 | MS.gene28988:CDS | 45.0% | |
| GGAACCTGCAGATTTGAAGA+CGG | + | chr4.2:32677230-32677249 | None:intergenic | 45.0% | |
| GGCCTAAAAGATAGGGAATG+TGG | + | chr4.2:32677278-32677297 | None:intergenic | 45.0% | |
| GTCTTCAAATCTGCAGGTTC+CGG | - | chr4.2:32677229-32677248 | MS.gene28988:CDS | 45.0% | |
| GTGATAACTCTTGGAGGAGA+TGG | - | chr4.2:32675581-32675600 | MS.gene28988:intron | 45.0% | |
| TAAGATGGTCATCAGAACCC+TGG | + | chr4.2:32672747-32672766 | None:intergenic | 45.0% | |
| TCAATAGCAGAGGATCTGCA+TGG | - | chr4.2:32677342-32677361 | MS.gene28988:intron | 45.0% | |
| TCCATTCCTAAGGACGTCAT+GGG | + | chr4.2:32673789-32673808 | None:intergenic | 45.0% | |
| TCTTCAAATCTGCAGGTTCC+GGG | - | chr4.2:32677230-32677249 | MS.gene28988:CDS | 45.0% | |
| TTCCATTCCTAAGGACGTCA+TGG | + | chr4.2:32673790-32673809 | None:intergenic | 45.0% | |
| TTGGAAGGATACAAAGGCTG+AGG | + | chr4.2:32674934-32674953 | None:intergenic | 45.0% | |
| TTTCCTTAGGGTCTTTGCGA+CGG | + | chr4.2:32672913-32672932 | None:intergenic | 45.0% | |
| TTTGTTCCCATGACGTCCTT+AGG | - | chr4.2:32673780-32673799 | MS.gene28988:CDS | 45.0% | |
| ! | AATATGAGTTGGAGCGGACA+CGG | - | chr4.2:32672985-32673004 | MS.gene28988:intron | 45.0% |
| ! | CGTCATTTGATGGCAAAGAC+AGG | - | chr4.2:32677366-32677385 | MS.gene28988:intron | 45.0% |
| ! | GCCCACATTCCCTATCTTTT+AGG | - | chr4.2:32677273-32677292 | MS.gene28988:intron | 45.0% |
| ! | TACCAGAGCATGTGGCTTTA+CGG | - | chr4.2:32677306-32677325 | MS.gene28988:intron | 45.0% |
| ! | TCAATATGAGCACCGTCTGT+GGG | + | chr4.2:32674617-32674636 | None:intergenic | 45.0% |
| !! | AGATGCATTGGTTTGCAGCA+TGG | - | chr4.2:32677406-32677425 | MS.gene28988:CDS | 45.0% |
| !! | GCTCTTCAAGAAAGTACCTG+AGG | + | chr4.2:32676858-32676877 | None:intergenic | 45.0% |
| !!! | CCCTTTTCTTTAGGGTCTCT+TGG | - | chr4.2:32676418-32676437 | MS.gene28988:CDS | 45.0% |
| AAAAGCTGCTGCTCAAGCTG+AGG | - | chr4.2:32672944-32672963 | MS.gene28988:intron | 50.0% | |
| AAATTCGAGTGTGACGTCGC+AGG | - | chr4.2:32672648-32672667 | MS.gene28988:CDS | 50.0% | |
| AACCCCGTCTTCAAATCTGC+AGG | - | chr4.2:32677223-32677242 | MS.gene28988:CDS | 50.0% | |
| AGGAGATGGCACTGTCCTAT+GGG | - | chr4.2:32675595-32675614 | MS.gene28988:intron | 50.0% | |
| AGGATCAATGGTCCATCCTC+AGG | - | chr4.2:32676839-32676858 | MS.gene28988:intron | 50.0% | |
| ATATGTGGAACCACGTGTCC+AGG | - | chr4.2:32675094-32675113 | MS.gene28988:CDS | 50.0% | |
| CAAGATCAGCCCAATGCTCA+AGG | + | chr4.2:32673667-32673686 | None:intergenic | 50.0% | |
| CACAAGGTTCTCAGGTGCAA+TGG | + | chr4.2:32675319-32675338 | None:intergenic | 50.0% | |
| CCTTTGTCACACGTGTGCAA+GGG | - | chr4.2:32676760-32676779 | MS.gene28988:intron | 50.0% | |
| CTGCAAACCAATGCATCTCC+TGG | + | chr4.2:32677404-32677423 | None:intergenic | 50.0% | |
| CTTTGTCACACGTGTGCAAG+GGG | - | chr4.2:32676761-32676780 | MS.gene28988:intron | 50.0% | |
| GAAGGTTGAGCTACCATCTC+TGG | - | chr4.2:32676209-32676228 | MS.gene28988:intron | 50.0% | |
| GAATCTCCATGACAAGCCGT+AGG | + | chr4.2:32677446-32677465 | None:intergenic | 50.0% | |
| GACAGGAAACAGTTAGCACC+AGG | - | chr4.2:32677383-32677402 | MS.gene28988:intron | 50.0% | |
| GCATATTCTTTGGCAGCTGG+AGG | - | chr4.2:32676819-32676838 | MS.gene28988:intron | 50.0% | |
| GTTAGCACCAGGAGATGCAT+TGG | - | chr4.2:32677394-32677413 | MS.gene28988:intron | 50.0% | |
| GTTGCAGCAGGATTCCCTAT+TGG | - | chr4.2:32673893-32673912 | MS.gene28988:intron | 50.0% | |
| TCCCATGACGTCCTTAGGAA+TGG | - | chr4.2:32673785-32673804 | MS.gene28988:CDS | 50.0% | |
| TCCTTTGTCACACGTGTGCA+AGG | - | chr4.2:32676759-32676778 | MS.gene28988:intron | 50.0% | |
| TCTGCATGGGCGTCATTTGA+TGG | - | chr4.2:32677356-32677375 | MS.gene28988:intron | 50.0% | |
| TCTTTGCGACGGCTAGAAGA+AGG | + | chr4.2:32672902-32672921 | None:intergenic | 50.0% | |
| TGGTCATCAGAACCCTGGAT+TGG | + | chr4.2:32672742-32672761 | None:intergenic | 50.0% | |
| TTTGGCAGCTGGAGGATCAA+TGG | - | chr4.2:32676827-32676846 | MS.gene28988:intron | 50.0% | |
| ! | AATATGAGCACCGTCTGTGG+GGG | + | chr4.2:32674615-32674634 | None:intergenic | 50.0% |
| ! | ACCAGAGCATGTGGCTTTAC+GGG | - | chr4.2:32677307-32677326 | MS.gene28988:intron | 50.0% |
| ! | CAATATGAGCACCGTCTGTG+GGG | + | chr4.2:32674616-32674635 | None:intergenic | 50.0% |
| ! | GTCAATATGAGCACCGTCTG+TGG | + | chr4.2:32674618-32674637 | None:intergenic | 50.0% |
| !!! | GAAGACGGGGTTTTAGATGG+AGG | + | chr4.2:32677215-32677234 | None:intergenic | 50.0% |
| !!! | GGTTTTAGATGGAGGACAGG+AGG | + | chr4.2:32677207-32677226 | None:intergenic | 50.0% |
| ACCCGTAAAGCCACATGCTC+TGG | + | chr4.2:32677311-32677330 | None:intergenic | 55.0% | |
| ACGTGTCCAGGTCGATCTTC+TGG | - | chr4.2:32675106-32675125 | MS.gene28988:CDS | 55.0% | |
| ACTCCTCCAGAAGATCGACC+TGG | + | chr4.2:32675115-32675134 | None:intergenic | 55.0% | |
| AGAAGATCGACCTGGACACG+TGG | + | chr4.2:32675107-32675126 | None:intergenic | 55.0% | |
| AGCAGAGCGCAGTAGTAAGC+AGG | - | chr4.2:32674399-32674418 | MS.gene28988:intron | 55.0% | |
| CCATGACAAGCCGTAGGAAC+AGG | + | chr4.2:32677440-32677459 | None:intergenic | 55.0% | |
| CCCTTGCACACGTGTGACAA+AGG | + | chr4.2:32676763-32676782 | None:intergenic | 55.0% | |
| CCTGTTCCTACGGCTTGTCA+TGG | - | chr4.2:32677437-32677456 | MS.gene28988:CDS | 55.0% | |
| CTTACTACTGCGCTCTGCTG+TGG | + | chr4.2:32674398-32674417 | None:intergenic | 55.0% | |
| GAGGAGATGGCACTGTCCTA+TGG | - | chr4.2:32675594-32675613 | MS.gene28988:intron | 55.0% | |
| TAGCCGTCGCAAAGACCCTA+AGG | - | chr4.2:32672907-32672926 | MS.gene28988:CDS | 55.0% | |
| TGTCCAGGTCGATCTTCTGG+AGG | - | chr4.2:32675109-32675128 | MS.gene28988:intron | 55.0% | |
| ! | AAGGGGACAATAGGAGGCAC+TGG | + | chr4.2:32676403-32676422 | None:intergenic | 55.0% |
| !!! | CGGGGTTTTAGATGGAGGAC+AGG | + | chr4.2:32677210-32677229 | None:intergenic | 55.0% |
| ACAAGCCGTAGGAACAGGCC+AGG | + | chr4.2:32677435-32677454 | None:intergenic | 60.0% | |
| ATGGGAGTCACCCCCACAGA+CGG | - | chr4.2:32674602-32674621 | MS.gene28988:CDS | 60.0% | |
| CAAGCCGTAGGAACAGGCCA+GGG | + | chr4.2:32677434-32677453 | None:intergenic | 60.0% | |
| CTCAAGCTGAGGCTGCCGAA+TGG | - | chr4.2:32672955-32672974 | MS.gene28988:intron | 60.0% | |
| GTCACACGTGTGCAAGGGGA+TGG | - | chr4.2:32676765-32676784 | MS.gene28988:intron | 60.0% | |
| GTGACGTCGCAGGCTGAGAA+TGG | - | chr4.2:32672658-32672677 | MS.gene28988:CDS | 60.0% | |
| ! | TGGTTTGCAGCATGGCACCC+TGG | - | chr4.2:32677414-32677433 | MS.gene28988:CDS | 60.0% |
| GGCACCCTGGCCTGTTCCTA+CGG | - | chr4.2:32677427-32677446 | MS.gene28988:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 32672637 | 32677553 | 32672637 | ID=MS.gene28988 |
| chr4.2 | mRNA | 32672637 | 32677553 | 32672637 | ID=MS.gene28988.t1;Parent=MS.gene28988 |
| chr4.2 | exon | 32677400 | 32677553 | 32677400 | ID=MS.gene28988.t1.exon1;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32677400 | 32677553 | 32677400 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32677161 | 32677280 | 32677161 | ID=MS.gene28988.t1.exon2;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32677161 | 32677280 | 32677161 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32676349 | 32676536 | 32676349 | ID=MS.gene28988.t1.exon3;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32676349 | 32676536 | 32676349 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32675770 | 32675883 | 32675770 | ID=MS.gene28988.t1.exon4;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32675770 | 32675883 | 32675770 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32675505 | 32675599 | 32675505 | ID=MS.gene28988.t1.exon5;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32675505 | 32675599 | 32675505 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32675020 | 32675126 | 32675020 | ID=MS.gene28988.t1.exon6;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32675020 | 32675126 | 32675020 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32674574 | 32674647 | 32674574 | ID=MS.gene28988.t1.exon7;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32674574 | 32674647 | 32674574 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32673733 | 32673811 | 32673733 | ID=MS.gene28988.t1.exon8;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32673733 | 32673811 | 32673733 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32673330 | 32673637 | 32673330 | ID=MS.gene28988.t1.exon9;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32673330 | 32673637 | 32673330 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| chr4.2 | exon | 32672637 | 32672945 | 32672637 | ID=MS.gene28988.t1.exon10;Parent=MS.gene28988.t1 |
| chr4.2 | CDS | 32672637 | 32672945 | 32672637 | ID=cds.MS.gene28988.t1;Parent=MS.gene28988.t1 |
| Gene Sequence |
| Protein sequence |
