Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052344.t1 | XP_003607363.1 | 98.9 | 523 | 6 | 0 | 1 | 523 | 1 | 523 | 1.90E-301 | 1044.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052344.t1 | Q56YN3 | 72.2 | 510 | 133 | 4 | 15 | 520 | 20 | 524 | 1.1e-207 | 724.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052344.t1 | G7JRM7 | 98.9 | 523 | 6 | 0 | 1 | 523 | 1 | 523 | 1.4e-301 | 1044.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052344 | MS.gene052917 | 0.800502 | 1.40E-48 | -1.69E-46 |
| MS.gene052344 | MS.gene053836 | -0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene059518 | -0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene061679 | -0.810009 | 1.43E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene061788 | -0.837005 | 6.71E-57 | -1.69E-46 |
| MS.gene052344 | MS.gene062252 | -0.800269 | 1.56E-48 | -1.69E-46 |
| MS.gene052344 | MS.gene062882 | -0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene062883 | -0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene065137 | -0.815619 | 8.42E-52 | -1.69E-46 |
| MS.gene052344 | MS.gene065138 | -0.819662 | 1.03E-52 | -1.69E-46 |
| MS.gene052344 | MS.gene066019 | -0.805107 | 1.57E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene069190 | 0.836248 | 1.05E-56 | -1.69E-46 |
| MS.gene052344 | MS.gene070724 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene052344 | MS.gene073340 | 0.815442 | 9.23E-52 | -1.69E-46 |
| MS.gene052344 | MS.gene08665 | -0.807004 | 6.25E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene20612 | -0.80389 | 2.81E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene23088 | -0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene23923 | -0.825111 | 5.60E-54 | -1.69E-46 |
| MS.gene052344 | MS.gene26923 | 0.807398 | 5.15E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene28067 | -0.828791 | 7.39E-55 | -1.69E-46 |
| MS.gene052344 | MS.gene28988 | 0.927593 | 9.47E-92 | -1.69E-46 |
| MS.gene052344 | MS.gene29515 | -0.813325 | 2.71E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene35394 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene50134 | -0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene54700 | -0.807221 | 5.62E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene55219 | 0.828267 | 9.89E-55 | -1.69E-46 |
| MS.gene052344 | MS.gene55695 | -0.8187 | 1.71E-52 | -1.69E-46 |
| MS.gene052344 | MS.gene57299 | -0.832613 | 8.55E-56 | -1.69E-46 |
| MS.gene052344 | MS.gene57853 | -0.814194 | 1.74E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene59218 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene59730 | -0.80153 | 8.62E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene61507 | -0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene62003 | -0.804355 | 2.25E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene62419 | -0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene63376 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene052344 | MS.gene64424 | -0.838694 | 2.47E-57 | -1.69E-46 |
| MS.gene052344 | MS.gene64426 | -0.824324 | 8.58E-54 | -1.69E-46 |
| MS.gene052344 | MS.gene64533 | -0.812295 | 4.55E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene64621 | -0.80233 | 5.90E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene65665 | -0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene67557 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene052344 | MS.gene69174 | -0.802504 | 5.44E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene74914 | -0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene75021 | -0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene76043 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene79342 | -0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene83563 | 0.849704 | 2.73E-60 | -1.69E-46 |
| MS.gene052344 | MS.gene85579 | -0.800075 | 1.71E-48 | -1.69E-46 |
| MS.gene052344 | MS.gene86445 | 0.831737 | 1.41E-55 | -1.69E-46 |
| MS.gene052344 | MS.gene86966 | 0.828441 | 8.98E-55 | -1.69E-46 |
| MS.gene052344 | MS.gene89638 | -0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene052344 | MS.gene90298 | -0.825883 | 3.68E-54 | -1.69E-46 |
| MS.gene052344 | MS.gene96331 | 0.827195 | 1.79E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052344.t1 | MTR_4g076990 | 98.853 | 523 | 6 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1077 |
| MS.gene052344.t1 | MTR_3g088575 | 45.706 | 326 | 166 | 5 | 197 | 517 | 565 | 884 | 1.50e-88 | 291 |
| MS.gene052344.t1 | MTR_1g029620 | 45.260 | 327 | 166 | 6 | 197 | 517 | 689 | 1008 | 1.45e-81 | 274 |
| MS.gene052344.t1 | MTR_1g029620 | 46.388 | 263 | 126 | 7 | 197 | 452 | 689 | 943 | 3.11e-62 | 220 |
| MS.gene052344.t1 | MTR_3g088575 | 42.731 | 227 | 119 | 5 | 197 | 418 | 660 | 880 | 5.74e-48 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052344.t1 | AT3G21070 | 70.510 | 529 | 142 | 6 | 1 | 520 | 1 | 524 | 0.0 | 748 |
| MS.gene052344.t1 | AT3G21070 | 70.510 | 529 | 142 | 6 | 1 | 520 | 79 | 602 | 0.0 | 746 |
| MS.gene052344.t1 | AT3G21070 | 72.521 | 484 | 121 | 3 | 44 | 520 | 1 | 479 | 0.0 | 723 |
| MS.gene052344.t1 | AT3G21070 | 61.468 | 327 | 112 | 6 | 1 | 318 | 79 | 400 | 1.57e-127 | 378 |
| MS.gene052344.t1 | AT1G21640 | 43.865 | 326 | 172 | 5 | 197 | 517 | 665 | 984 | 1.32e-81 | 274 |
| MS.gene052344.t1 | AT1G21640 | 42.773 | 339 | 171 | 6 | 197 | 517 | 665 | 998 | 6.00e-81 | 272 |
Find 134 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACTGCTTTCTCAGAAAA+TGG | 0.204921 | 4.4:+33572890 | None:intergenic |
| ATCATCTTACCTCACAAATT+TGG | 0.209583 | 4.4:-33568962 | MS.gene052344:CDS |
| CGGCAGTACTGCATATTCTT+TGG | 0.311982 | 4.4:-33568872 | MS.gene052344:CDS |
| TACCAGAGCATGTGACTTTA+CGG | 0.322494 | 4.4:-33568375 | MS.gene052344:CDS |
| CATATTGACCAAACCAAATT+CGG | 0.325935 | 4.4:-33571010 | MS.gene052344:CDS |
| TTTATATAATGTGGTTTGTT+TGG | 0.329273 | 4.4:+33571927 | None:intergenic |
| GAGCATCTTGGAATCAGAAT+TGG | 0.335509 | 4.4:+33571825 | None:intergenic |
| TATTCCAGATCTCTTTGAAA+TGG | 0.348895 | 4.4:-33571056 | MS.gene052344:intron |
| ATATCAGTGGCCTAAAAGAT+AGG | 0.356411 | 4.4:+33568398 | None:intergenic |
| GCTTCTTCAATTACCAATCC+AGG | 0.364612 | 4.4:-33572864 | MS.gene052344:CDS |
| GTGCCGTAATGTAATACTAA+TGG | 0.366497 | 4.4:+33569083 | None:intergenic |
| GATAGGGAATGTGGGCAAAT+TGG | 0.368637 | 4.4:+33568415 | None:intergenic |
| AGCATCTTGGAATCAGAATT+GGG | 0.369523 | 4.4:+33571826 | None:intergenic |
| ACGTGTCCAGGTCGATCTTC+TGG | 0.371257 | 4.4:-33570533 | MS.gene052344:CDS |
| TGCCGTAATGTAATACTAAT+GGG | 0.375757 | 4.4:+33569084 | None:intergenic |
| TTCCTTCAGCAACTTTCCTA+AGG | 0.383595 | 4.4:+33572667 | None:intergenic |
| AACTGAATCCGAATTTGGTT+TGG | 0.384384 | 4.4:+33571002 | None:intergenic |
| TCTTCAAATCTGCAGGTTCC+GGG | 0.402559 | 4.4:-33568451 | MS.gene052344:intron |
| TTTGTTCCCATGACGTCCTT+AGG | 0.405594 | 4.4:-33571858 | MS.gene052344:CDS |
| CCTAAAGAAAAGGGGACAAT+AGG | 0.406636 | 4.4:+33569272 | None:intergenic |
| GTTGACCTTGTGATAACTCT+TGG | 0.415690 | 4.4:-33570067 | MS.gene052344:CDS |
| GCATTCATGAGGGTCTTCAT+TGG | 0.415841 | 4.4:-33568195 | MS.gene052344:CDS |
| GAGGAGATGGCACTGTCCTA+TGG | 0.419569 | 4.4:-33570045 | MS.gene052344:CDS |
| TCCAAGAGACCCTAAAGAAA+AGG | 0.423735 | 4.4:+33569262 | None:intergenic |
| AAATACCTTTCTGAGCATCT+TGG | 0.428311 | 4.4:+33571813 | None:intergenic |
| AAAATCATGCCTTGAGCATC+GGG | 0.428344 | 4.4:-33571983 | MS.gene052344:CDS |
| ACCAGAGCATGTGACTTTAC+GGG | 0.430125 | 4.4:-33568374 | MS.gene052344:CDS |
| CCAAGAGACCCTAAAGAAAA+GGG | 0.433750 | 4.4:+33569263 | None:intergenic |
| ATTCCAGATCTCTTTGAAAT+GGG | 0.437686 | 4.4:-33571055 | MS.gene052344:intron |
| TATATAAAGTTGAAGCTAAC+GGG | 0.441430 | 4.4:-33571912 | MS.gene052344:CDS |
| TCTGCATGGGCGTCATTTGA+TGG | 0.444185 | 4.4:-33568325 | MS.gene052344:CDS |
| ATATAATGTGGTTTGTTTGG+CGG | 0.445641 | 4.4:+33571930 | None:intergenic |
| CTCATATTTACGTTTCCATT+CGG | 0.448735 | 4.4:+33572620 | None:intergenic |
| TTTGGCAGCTGGAGGATCAA+TGG | 0.451281 | 4.4:-33568854 | MS.gene052344:CDS |
| CCATGACAAGCCGTAGGAAC+AGG | 0.452096 | 4.4:+33568244 | None:intergenic |
| GGCCCTTTAAAATTGATTCA+AGG | 0.464517 | 4.4:+33569106 | None:intergenic |
| GCCCCATTAGTATTACATTA+CGG | 0.471359 | 4.4:-33569086 | MS.gene052344:CDS |
| TAGCCGTCGCAAAGACCCTT+AGG | 0.472485 | 4.4:-33572683 | MS.gene052344:CDS |
| TCAATATGAGCACCGTCTGT+GGG | 0.476528 | 4.4:+33571025 | None:intergenic |
| GAAAATCATGCCTTGAGCAT+CGG | 0.477900 | 4.4:-33571984 | MS.gene052344:CDS |
| GCGAGATTGTCATGCTTCAC+GGG | 0.478288 | 4.4:+33568141 | None:intergenic |
| GGCACCCTGGCCTGTTCCTA+CGG | 0.479828 | 4.4:-33568254 | MS.gene052344:CDS |
| AGCTTCAACTTTATATAATG+TGG | 0.480008 | 4.4:+33571918 | None:intergenic |
| ACTGCATATTCTTTGGCAGC+TGG | 0.480334 | 4.4:-33568865 | MS.gene052344:CDS |
| ACCCGTAAAGTCACATGCTC+TGG | 0.486419 | 4.4:+33568373 | None:intergenic |
| TCCTTCAGCAACTTTCCTAA+GGG | 0.493250 | 4.4:+33572668 | None:intergenic |
| AGCGAGATTGTCATGCTTCA+CGG | 0.498575 | 4.4:+33568140 | None:intergenic |
| GTCACACGTGTGCAAGGGGA+TGG | 0.499730 | 4.4:-33568916 | MS.gene052344:CDS |
| AATTGGGGTTTCCATTCCTA+AGG | 0.501829 | 4.4:+33571842 | None:intergenic |
| TCCTTTGTCACACGTGTGCA+AGG | 0.504294 | 4.4:-33568922 | MS.gene052344:CDS |
| ATATGTGGAACCACGTGTCC+AGG | 0.505262 | 4.4:-33570545 | MS.gene052344:CDS |
| TTCTGTGTGCTGAAATGATT+AGG | 0.505327 | 4.4:-33570975 | MS.gene052344:intron |
| GTCAATATGAGCACCGTCTG+TGG | 0.508326 | 4.4:+33571024 | None:intergenic |
| CTGCAAACCAATGCATCTCC+TGG | 0.509619 | 4.4:+33568280 | None:intergenic |
| TCCCATGACGTCCTTAGGAA+TGG | 0.510150 | 4.4:-33571853 | MS.gene052344:CDS |
| CTCAAGCTGAGGCTGCCGAA+TGG | 0.510339 | 4.4:-33572635 | MS.gene052344:CDS |
| GTGACGTCGCAGGCTGAGAA+TGG | 0.510604 | 4.4:-33572932 | MS.gene052344:CDS |
| CGTCATTTGATGGCAAAGAC+AGG | 0.513709 | 4.4:-33568315 | MS.gene052344:CDS |
| TGGTTTGCAGCATGGCACCC+TGG | 0.513901 | 4.4:-33568267 | MS.gene052344:CDS |
| ATTCAGAGAACTCTATAAGA+TGG | 0.515452 | 4.4:+33572831 | None:intergenic |
| AGCAGAGCGCAGTAGTAAGC+AGG | 0.517230 | 4.4:-33571240 | MS.gene052344:intron |
| ATGGAAACGTAAATATGAGT+TGG | 0.518720 | 4.4:-33572616 | MS.gene052344:CDS |
| AATATGAGTTGGAGCGGACA+CGG | 0.519631 | 4.4:-33572605 | MS.gene052344:CDS |
| AGGATCAATGGTCCATCCTC+AGG | 0.522080 | 4.4:-33568842 | MS.gene052344:intron |
| TAAGAAACTACAAGTATATG+TGG | 0.523520 | 4.4:-33570560 | MS.gene052344:CDS |
| GCAGATCCTCTGCTATTGAA+TGG | 0.526265 | 4.4:+33568343 | None:intergenic |
| GTTAGCACCAGGAGATGCAT+TGG | 0.526664 | 4.4:-33568287 | MS.gene052344:CDS |
| AAACTTCAATGGTGCTGCAA+AGG | 0.526729 | 4.4:-33571323 | MS.gene052344:CDS |
| AAGGGGACAATAGGAGGCAC+TGG | 0.531100 | 4.4:+33569281 | None:intergenic |
| GTGATAACTCTTGGAGGAGA+TGG | 0.532119 | 4.4:-33570058 | MS.gene052344:CDS |
| TTCCATTCCTAAGGACGTCA+TGG | 0.534502 | 4.4:+33571851 | None:intergenic |
| ACAAGCCGTAGGAACAGGCC+AGG | 0.537381 | 4.4:+33568249 | None:intergenic |
| CCTGTTCCTACGGCTTGTCA+TGG | 0.541901 | 4.4:-33568244 | MS.gene052344:CDS |
| GACCTTGTGATAACTCTTGG+AGG | 0.543147 | 4.4:-33570064 | MS.gene052344:CDS |
| AGGAGATGGCACTGTCCTAT+GGG | 0.543589 | 4.4:-33570044 | MS.gene052344:intron |
| AGATGCATTGGTTTGCAGCA+TGG | 0.544167 | 4.4:-33568275 | MS.gene052344:CDS |
| GGCCTAAAAGATAGGGAATG+TGG | 0.546385 | 4.4:+33568406 | None:intergenic |
| AGTCTGAAGAATGTTATTCA+AGG | 0.548385 | 4.4:-33571888 | MS.gene052344:CDS |
| GAAGAATGTTATTCAAGGAA+TGG | 0.548576 | 4.4:-33571883 | MS.gene052344:CDS |
| TTATCATTCTCAGATGGTTG+AGG | 0.555430 | 4.4:-33570588 | MS.gene052344:intron |
| TATCAGTGGCCTAAAAGATA+GGG | 0.556872 | 4.4:+33568399 | None:intergenic |
| TCCATTCCTAAGGACGTCAT+GGG | 0.556880 | 4.4:+33571852 | None:intergenic |
| AAAGAAAAGGGGACAATAGG+AGG | 0.560184 | 4.4:+33569275 | None:intergenic |
| ACTTTAACTTTGTAGAAACA+TGG | 0.561034 | 4.4:-33570498 | MS.gene052344:CDS |
| CAAGATCAGCCCGATGCTCA+AGG | 0.561911 | 4.4:+33571974 | None:intergenic |
| CTTCTTCAATTACCAATCCA+GGG | 0.562191 | 4.4:-33572863 | MS.gene052344:CDS |
| TTCAAGAAAGTACCTGAGGA+TGG | 0.571238 | 4.4:+33568830 | None:intergenic |
| CCTTTGTCACACGTGTGCAA+GGG | 0.572743 | 4.4:-33568921 | MS.gene052344:CDS |
| GCATATTCTTTGGCAGCTGG+AGG | 0.576402 | 4.4:-33568862 | MS.gene052344:CDS |
| AAATTCGAGTGTGACGTCGC+AGG | 0.576930 | 4.4:-33572942 | MS.gene052344:CDS |
| CAAAGAATATGCAGTACTGC+CGG | 0.577407 | 4.4:+33568873 | None:intergenic |
| CCCTTGCACACGTGTGACAA+AGG | 0.578224 | 4.4:+33568921 | None:intergenic |
| GTATAACATGACATATCAAA+CGG | 0.579333 | 4.4:+33569061 | None:intergenic |
| TTATATAAAGTTGAAGCTAA+CGG | 0.582757 | 4.4:-33571913 | MS.gene052344:CDS |
| TGATTCCAAGATGCTCAGAA+AGG | 0.584205 | 4.4:-33571818 | MS.gene052344:intron |
| CTTCTTGCACAGCATTCATG+AGG | 0.584282 | 4.4:-33568206 | MS.gene052344:CDS |
| CTTTGTCACACGTGTGCAAG+GGG | 0.585437 | 4.4:-33568920 | MS.gene052344:CDS |
| GACAGGAAACAGTTAGCACC+AGG | 0.587740 | 4.4:-33568298 | MS.gene052344:CDS |
| TAAGATGGTCATCAGAACCC+TGG | 0.595252 | 4.4:+33572846 | None:intergenic |
| TTTCCTAAGGGTCTTTGCGA+CGG | 0.596647 | 4.4:+33572680 | None:intergenic |
| TTTGTAGAAACATGGAGTGA+TGG | 0.596829 | 4.4:-33570490 | MS.gene052344:intron |
| AAAAGCTGCTGCTCAAGCTG+AGG | 0.596980 | 4.4:-33572646 | MS.gene052344:CDS |
| CAGACAGCATCTATGTTCAA+AGG | 0.597231 | 4.4:-33569305 | MS.gene052344:CDS |
| TGGTCATCAGAACCCTGGAT+TGG | 0.600554 | 4.4:+33572851 | None:intergenic |
| ACTCCTCCAGAAGATCGACC+TGG | 0.600736 | 4.4:+33570527 | None:intergenic |
| GCCTAAAAGATAGGGAATGT+GGG | 0.606323 | 4.4:+33568407 | None:intergenic |
| CTTACTACTGCGCTCTGCTG+TGG | 0.613186 | 4.4:+33571244 | None:intergenic |
| ACCCTTAGGAAAGTTGCTGA+AGG | 0.613952 | 4.4:-33572669 | MS.gene052344:CDS |
| CAAATACCATTCAATAGCAG+AGG | 0.614625 | 4.4:-33568349 | MS.gene052344:CDS |
| AACGTAAATATGAGTTGGAG+CGG | 0.620635 | 4.4:-33572611 | MS.gene052344:CDS |
| CAAGCCGTAGGAACAGGCCA+GGG | 0.621041 | 4.4:+33568250 | None:intergenic |
| TCAATAGCAGAGGATCTGCA+TGG | 0.622946 | 4.4:-33568339 | MS.gene052344:CDS |
| GTGGGAGAATTGAGCTTGTG+AGG | 0.625456 | 4.4:+33573795 | None:intergenic |
| CTCCTCCAAGAGTTATCACA+AGG | 0.626125 | 4.4:+33570062 | None:intergenic |
| TTCTTGCACAGCATTCATGA+GGG | 0.628470 | 4.4:-33568205 | MS.gene052344:CDS |
| GCATCTTGGAATCAGAATTG+GGG | 0.632152 | 4.4:+33571827 | None:intergenic |
| CAATAGCAGAGGATCTGCAT+GGG | 0.633440 | 4.4:-33568338 | MS.gene052344:CDS |
| AGTAACATTCCAAATTTGTG+AGG | 0.633691 | 4.4:+33568953 | None:intergenic |
| GAGCTTGTGAGGAGGTGCCA+TGG | 0.634948 | 4.4:+33573806 | None:intergenic |
| CAATATGAGCACCGTCTGTG+GGG | 0.637061 | 4.4:+33571026 | None:intergenic |
| TCACAAGCTCAATTCTCCCA+CGG | 0.637477 | 4.4:-33573793 | MS.gene052344:intron |
| ACATGCTCTGGTAATATCAG+TGG | 0.641766 | 4.4:+33568385 | None:intergenic |
| ATCTATACTTGTTCTAAACG+AGG | 0.643745 | 4.4:-33569004 | MS.gene052344:CDS |
| TGTCCAGGTCGATCTTCTGG+AGG | 0.648734 | 4.4:-33570530 | MS.gene052344:CDS |
| AACGAGGTTACTATTGATCG+TGG | 0.656515 | 4.4:-33568988 | MS.gene052344:CDS |
| AATATGAGCACCGTCTGTGG+GGG | 0.658209 | 4.4:+33571027 | None:intergenic |
| GAATCTCCATGACAAGCCGT+AGG | 0.661516 | 4.4:+33568238 | None:intergenic |
| GCCGTAATGTAATACTAATG+GGG | 0.664160 | 4.4:+33569085 | None:intergenic |
| AGAAGATCGACCTGGACACG+TGG | 0.664253 | 4.4:+33570535 | None:intergenic |
| CAAGAGACCCTAAAGAAAAG+GGG | 0.665932 | 4.4:+33569264 | None:intergenic |
| CGAGATTGTCATGCTTCACG+GGG | 0.669838 | 4.4:+33568142 | None:intergenic |
| ATTGGCGTAAACAAAATACC+CGG | 0.685864 | 4.4:+33568433 | None:intergenic |
| GGAGAATTGAGCTTGTGAGG+AGG | 0.732507 | 4.4:+33573798 | None:intergenic |
| AATCTGCAGATTGAAAACAA+AGG | 0.735260 | 4.4:-33572582 | MS.gene052344:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCATCATAAAATTAAAAA+AGG | + | chr4.4:33572455-33572474 | None:intergenic | 10.0% |
| !! | ATTACTATATAATATTGTAT+CGG | + | chr4.4:33570421-33570440 | None:intergenic | 10.0% |
| !! | TTTCAAAATTTGAAAATAAT+GGG | - | chr4.4:33568536-33568555 | MS.gene052344:intron | 10.0% |
| !!! | AAATTTTGAAAAATTGAATT+TGG | + | chr4.4:33568527-33568546 | None:intergenic | 10.0% |
| !!! | TTTTCAAAATTTGAAAATAA+TGG | - | chr4.4:33568535-33568554 | MS.gene052344:intron | 10.0% |
| !!! | TTTTTTAATTACAACAAAAT+GGG | - | chr4.4:33568379-33568398 | MS.gene052344:CDS | 10.0% |
| !!! | TTTTTTTAATTACAACAAAA+TGG | - | chr4.4:33568378-33568397 | MS.gene052344:CDS | 10.0% |
| !! | AAAATAAACAAAATAGTGAA+TGG | - | chr4.4:33571684-33571703 | MS.gene052344:intron | 15.0% |
| !! | AAATGATTGAAATGAATAAA+CGG | + | chr4.4:33569529-33569548 | None:intergenic | 15.0% |
| !! | ATTAAAGATAAATTGCTTAT+AGG | - | chr4.4:33569591-33569610 | MS.gene052344:intron | 15.0% |
| !! | TAAAAAAAAATATACGTCTA+AGG | + | chr4.4:33573351-33573370 | None:intergenic | 15.0% |
| !!! | TAATTTTGTCATCTAAAATA+TGG | - | chr4.4:33571997-33572016 | MS.gene052344:intron | 15.0% |
| !!! | TTTTAAAATATCCTATTGAA+TGG | - | chr4.4:33571945-33571964 | MS.gene052344:CDS | 15.0% |
| !! | AAAAAAATACCAATTAACCA+AGG | + | chr4.4:33571344-33571363 | None:intergenic | 20.0% |
| !! | AAAAAATACCAATTAACCAA+GGG | + | chr4.4:33571343-33571362 | None:intergenic | 20.0% |
| !! | AAGCAATTTATCTTTAATAC+AGG | + | chr4.4:33569589-33569608 | None:intergenic | 20.0% |
| !! | AATTATGTATATGCATGATT+CGG | + | chr4.4:33572233-33572252 | None:intergenic | 20.0% |
| !! | AGATAAATATATGGTAGATT+AGG | - | chr4.4:33572189-33572208 | MS.gene052344:intron | 20.0% |
| !! | ATATCACAAAGCAATATATT+AGG | + | chr4.4:33572599-33572618 | None:intergenic | 20.0% |
| !! | ATATCTGTTTACATTTCTAT+TGG | - | chr4.4:33572779-33572798 | MS.gene052344:intron | 20.0% |
| !! | ATTAAAAAGAAAAAATCGAC+CGG | + | chr4.4:33569501-33569520 | None:intergenic | 20.0% |
| !! | CAAATATTTGATGTCATAAA+AGG | - | chr4.4:33571495-33571514 | MS.gene052344:intron | 20.0% |
| !! | CTAAAATATGGTTAAAAGAA+AGG | - | chr4.4:33572009-33572028 | MS.gene052344:intron | 20.0% |
| !! | TATGCATTGAGATAAATATA+TGG | - | chr4.4:33572180-33572199 | MS.gene052344:intron | 20.0% |
| !! | TATGTTAGTATTAGTTCATT+AGG | - | chr4.4:33568942-33568961 | MS.gene052344:CDS | 20.0% |
| !! | TTATACTAAAGACAAATACT+TGG | + | chr4.4:33571268-33571287 | None:intergenic | 20.0% |
| !! | TTATATAAAGTTGAAGCTAA+CGG | - | chr4.4:33570041-33570060 | MS.gene052344:intron | 20.0% |
| !! | TTGAAAAATTCAACAGAAAA+AGG | + | chr4.4:33569802-33569821 | None:intergenic | 20.0% |
| !!! | AAATATTTAAGAGTACCAAT+AGG | + | chr4.4:33570227-33570246 | None:intergenic | 20.0% |
| !!! | AATATTTAAGAGTACCAATA+GGG | + | chr4.4:33570226-33570245 | None:intergenic | 20.0% |
| !!! | GAAGAAATGAAAGATTTTAA+CGG | + | chr4.4:33569734-33569753 | None:intergenic | 20.0% |
| !!! | GAAGTAACATTTTTAATGTT+GGG | - | chr4.4:33572422-33572441 | MS.gene052344:intron | 20.0% |
| !!! | TATACAACTATTTCTTGTTA+GGG | - | chr4.4:33568263-33568282 | MS.gene052344:CDS | 20.0% |
| !!! | TTAATTTTATCTACAACATC+CGG | - | chr4.4:33573062-33573081 | MS.gene052344:intron | 20.0% |
| !!! | TTACTCATAAGATTTTAACA+TGG | - | chr4.4:33573368-33573387 | MS.gene052344:intron | 20.0% |
| !!! | TTATACAACTATTTCTTGTT+AGG | - | chr4.4:33568262-33568281 | MS.gene052344:CDS | 20.0% |
| !!! | TTTAATTTTATGATGATTGC+TGG | - | chr4.4:33572457-33572476 | MS.gene052344:intron | 20.0% |
| !!! | TTTATATAATGTGGTTTGTT+TGG | + | chr4.4:33570030-33570049 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATCATTCTCAGA+TGG | - | chr4.4:33571360-33571379 | MS.gene052344:intron | 20.0% |
| ! | AAAAAAATCAAGTGTTCTGT+GGG | - | chr4.4:33568813-33568832 | MS.gene052344:intron | 25.0% |
| ! | AAAGGAATAAAACTTGACTT+TGG | + | chr4.4:33571046-33571065 | None:intergenic | 25.0% |
| ! | AAATATAGCTAATTACCATG+AGG | + | chr4.4:33570533-33570552 | None:intergenic | 25.0% |
| ! | AAGCAATATATTAGGATAAC+CGG | + | chr4.4:33572591-33572610 | None:intergenic | 25.0% |
| ! | AATATAGCTAATTACCATGA+GGG | + | chr4.4:33570532-33570551 | None:intergenic | 25.0% |
| ! | AGCATCATAACATAAGTAAA+AGG | + | chr4.4:33571064-33571083 | None:intergenic | 25.0% |
| ! | AGCTTCAACTTTATATAATG+TGG | + | chr4.4:33570039-33570058 | None:intergenic | 25.0% |
| ! | AGTAAACAGTAAACTTTCTT+TGG | + | chr4.4:33571710-33571729 | None:intergenic | 25.0% |
| ! | AGTTAACTATCTGATTATAG+TGG | - | chr4.4:33571795-33571814 | MS.gene052344:intron | 25.0% |
| ! | ATGCACATAAACAATTACAA+CGG | + | chr4.4:33571821-33571840 | None:intergenic | 25.0% |
| ! | ATTATGACACTAAAACTGTA+AGG | + | chr4.4:33573430-33573449 | None:intergenic | 25.0% |
| ! | GAAATGTACATAACCTTAAA+AGG | - | chr4.4:33572379-33572398 | MS.gene052344:intron | 25.0% |
| ! | GAGTATTCATTGTTAAACTT+TGG | - | chr4.4:33572525-33572544 | MS.gene052344:intron | 25.0% |
| ! | GTATAACATGACATATCAAA+CGG | + | chr4.4:33572896-33572915 | None:intergenic | 25.0% |
| ! | TAAAAAGAGTTAGTTACTTG+TGG | + | chr4.4:33572047-33572066 | None:intergenic | 25.0% |
| ! | TAAGAAACTACAAGTATATG+TGG | - | chr4.4:33571394-33571413 | MS.gene052344:intron | 25.0% |
| ! | TATATAAAGTTGAAGCTAAC+GGG | - | chr4.4:33570042-33570061 | MS.gene052344:intron | 25.0% |
| ! | TCATTATGTTAAAACAGACA+AGG | + | chr4.4:33571733-33571752 | None:intergenic | 25.0% |
| ! | TTTACTTTACATTACTCAAC+CGG | - | chr4.4:33572569-33572588 | MS.gene052344:intron | 25.0% |
| !! | AAATAATGGAAGATGTGTAA+TGG | - | chr4.4:33571108-33571127 | MS.gene052344:intron | 25.0% |
| !! | ACTTTAACTTTGTAGAAACA+TGG | - | chr4.4:33571456-33571475 | MS.gene052344:intron | 25.0% |
| !! | AGGTATCTCTTTTATTATTG+AGG | - | chr4.4:33570734-33570753 | MS.gene052344:intron | 25.0% |
| !! | CCATAACTTTGACTTTAATT+GGG | - | chr4.4:33568712-33568731 | MS.gene052344:intron | 25.0% |
| !! | GGAAGTAACATTTTTAATGT+TGG | - | chr4.4:33572421-33572440 | MS.gene052344:intron | 25.0% |
| !! | TAACATATTTTGCTTCGATA+AGG | + | chr4.4:33570175-33570194 | None:intergenic | 25.0% |
| !! | TATCTCTTTTATTATTGAGG+AGG | - | chr4.4:33570737-33570756 | MS.gene052344:intron | 25.0% |
| !! | TCATATCAAATGTCCTTTTA+AGG | + | chr4.4:33572395-33572414 | None:intergenic | 25.0% |
| !! | TCCATAACTTTGACTTTAAT+TGG | - | chr4.4:33568711-33568730 | MS.gene052344:intron | 25.0% |
| !! | TGCCTTGAATCAATTTTAAA+GGG | - | chr4.4:33572846-33572865 | MS.gene052344:CDS | 25.0% |
| !! | TTGTAATTTTCACTATCTGA+AGG | + | chr4.4:33572822-33572841 | None:intergenic | 25.0% |
| !! | TTGTAGATAAGGAAATTTTG+AGG | - | chr4.4:33571852-33571871 | MS.gene052344:CDS | 25.0% |
| !!! | AGATTTTAACATGGAAATTC+TGG | - | chr4.4:33573377-33573396 | MS.gene052344:intron | 25.0% |
| !!! | ATTTTAACTGAATCCGAATT+TGG | + | chr4.4:33570960-33570979 | None:intergenic | 25.0% |
| !!! | CAATTTTTTGCTTGTAGATA+AGG | - | chr4.4:33571841-33571860 | MS.gene052344:CDS | 25.0% |
| !!! | CGATTGTTTTTAATGAGATA+AGG | + | chr4.4:33570365-33570384 | None:intergenic | 25.0% |
| !!! | GTATCATTACAAGTTTTTTC+TGG | - | chr4.4:33573258-33573277 | MS.gene052344:intron | 25.0% |
| !!! | TTTTTCTAGTGCTATATTTG+TGG | - | chr4.4:33571606-33571625 | MS.gene052344:intron | 25.0% |
| AAACAATCGAGAGATATAAG+TGG | - | chr4.4:33570376-33570395 | MS.gene052344:intron | 30.0% | |
| AAACAATTTCACATACCCAT+AGG | + | chr4.4:33571928-33571947 | None:intergenic | 30.0% | |
| AAACACATTAGCAGTTTAGA+TGG | + | chr4.4:33569889-33569908 | None:intergenic | 30.0% | |
| AAAGGACATTTGATATGAGA+TGG | - | chr4.4:33572397-33572416 | MS.gene052344:intron | 30.0% | |
| AAATACTTGGAAGGATACAA+AGG | + | chr4.4:33571255-33571274 | None:intergenic | 30.0% | |
| AATCTGCAGATTGAAAACAA+AGG | - | chr4.4:33569372-33569391 | MS.gene052344:intron | 30.0% | |
| ACAAAAGCTAATAAGCAGTT+AGG | + | chr4.4:33568447-33568466 | None:intergenic | 30.0% | |
| ACTAAAGACAAATACTTGGA+AGG | + | chr4.4:33571264-33571283 | None:intergenic | 30.0% | |
| AGAATTAAGAAGAATTACCG+TGG | + | chr4.4:33568181-33568200 | None:intergenic | 30.0% | |
| AGGAGTTTCAAGACAAAATA+AGG | + | chr4.4:33569246-33569265 | None:intergenic | 30.0% | |
| AGTAACATTCCAAATTTGTG+AGG | + | chr4.4:33573004-33573023 | None:intergenic | 30.0% | |
| AGTCTGAAGAATGTTATTCA+AGG | - | chr4.4:33570066-33570085 | MS.gene052344:CDS | 30.0% | |
| AGTTTATAATTTCTACTCCC+TGG | - | chr4.4:33569932-33569951 | MS.gene052344:intron | 30.0% | |
| ATACAATTATGCGAAGTTGA+AGG | + | chr4.4:33572738-33572757 | None:intergenic | 30.0% | |
| ATAGAGTATATATCGACACA+AGG | + | chr4.4:33571650-33571669 | None:intergenic | 30.0% | |
| ATCATCTTACCTCACAAATT+TGG | - | chr4.4:33572992-33573011 | MS.gene052344:intron | 30.0% | |
| ATGCGACAAACATCAATAAA+AGG | + | chr4.4:33570287-33570306 | None:intergenic | 30.0% | |
| ATGGAAACGTAAATATGAGT+TGG | - | chr4.4:33569338-33569357 | MS.gene052344:intron | 30.0% | |
| ATTATGTTAATTACCCTGCT+AGG | - | chr4.4:33568304-33568323 | MS.gene052344:CDS | 30.0% | |
| ATTCAGAGAACTCTATAAGA+TGG | + | chr4.4:33569126-33569145 | None:intergenic | 30.0% | |
| CAAAAAAATCAAGTGTTCTG+TGG | - | chr4.4:33568812-33568831 | MS.gene052344:intron | 30.0% | |
| CAAAAGCTAATAAGCAGTTA+GGG | + | chr4.4:33568446-33568465 | None:intergenic | 30.0% | |
| CATATTGACCAAACCAAATT+CGG | - | chr4.4:33570944-33570963 | MS.gene052344:intron | 30.0% | |
| CCCAATTAAAGTCAAAGTTA+TGG | + | chr4.4:33568715-33568734 | None:intergenic | 30.0% | |
| CTCATATTTACGTTTCCATT+CGG | + | chr4.4:33569337-33569356 | None:intergenic | 30.0% | |
| CTGAAAACTATTTGATTCCT+GGG | - | chr4.4:33572296-33572315 | MS.gene052344:intron | 30.0% | |
| GAAAATATAAAGATAGCACG+AGG | + | chr4.4:33570831-33570850 | None:intergenic | 30.0% | |
| GAAGAATGTTATTCAAGGAA+TGG | - | chr4.4:33570071-33570090 | MS.gene052344:CDS | 30.0% | |
| GAATTAAGAAGAATTACCGT+GGG | + | chr4.4:33568180-33568199 | None:intergenic | 30.0% | |
| GGTCAAAATATATCTGTCTT+TGG | - | chr4.4:33572503-33572522 | MS.gene052344:intron | 30.0% | |
| TACAAAATCAATCATCGAAG+TGG | + | chr4.4:33569418-33569437 | None:intergenic | 30.0% | |
| TAGATGGTAGATCAATATTC+AGG | + | chr4.4:33569873-33569892 | None:intergenic | 30.0% | |
| TAGATTAGGAACCATGTTAA+AGG | - | chr4.4:33572203-33572222 | MS.gene052344:intron | 30.0% | |
| TAGGTTACAAGTTTGTATCT+TGG | - | chr4.4:33568961-33568980 | MS.gene052344:CDS | 30.0% | |
| TGCCGTAATGTAATACTAAT+GGG | + | chr4.4:33572873-33572892 | None:intergenic | 30.0% | |
| TGCGACAAACATCAATAAAA+GGG | + | chr4.4:33570286-33570305 | None:intergenic | 30.0% | |
| TTAATTACAACAAAATGGGC+AGG | - | chr4.4:33568383-33568402 | MS.gene052344:CDS | 30.0% | |
| TTAGACTATTGCCATTCAAT+AGG | + | chr4.4:33571959-33571978 | None:intergenic | 30.0% | |
| TTAGACTCTTCGCAAAATAA+TGG | - | chr4.4:33571094-33571113 | MS.gene052344:intron | 30.0% | |
| ! | AATTTTCACTATCTGAAGGA+AGG | + | chr4.4:33572818-33572837 | None:intergenic | 30.0% |
| ! | ACTAGAAAAAAAAGCTCTAG+TGG | + | chr4.4:33571596-33571615 | None:intergenic | 30.0% |
| ! | AGGCTTCTTTTAAACTTCAA+TGG | - | chr4.4:33570620-33570639 | MS.gene052344:intron | 30.0% |
| ! | ATCGTCTGAAAACGATTTTA+TGG | - | chr4.4:33569674-33569693 | MS.gene052344:intron | 30.0% |
| ! | ATCTATACTTGTTCTAAACG+AGG | - | chr4.4:33572950-33572969 | MS.gene052344:intron | 30.0% |
| ! | GTGCCTTGAATCAATTTTAA+AGG | - | chr4.4:33572845-33572864 | MS.gene052344:CDS | 30.0% |
| ! | TATTCCAGATCTCTTTGAAA+TGG | - | chr4.4:33570898-33570917 | MS.gene052344:intron | 30.0% |
| ! | TTGTCACGATCTTATCTTTT+AGG | - | chr4.4:33569836-33569855 | MS.gene052344:intron | 30.0% |
| !! | ATATAATGTGGTTTGTTTGG+CGG | + | chr4.4:33570027-33570046 | None:intergenic | 30.0% |
| !! | ATTATTTTGCGAAGAGTCTA+AGG | + | chr4.4:33571095-33571114 | None:intergenic | 30.0% |
| !! | ATTCCAGATCTCTTTGAAAT+GGG | - | chr4.4:33570899-33570918 | MS.gene052344:intron | 30.0% |
| !! | GCTATTAAATTGTCGATTTC+CGG | - | chr4.4:33569479-33569498 | MS.gene052344:intron | 30.0% |
| !! | TTAGCTTTTGTTAATTACCC+TGG | - | chr4.4:33568456-33568475 | MS.gene052344:intron | 30.0% |
| !!! | AGATATATTTTGACCAGAGA+TGG | + | chr4.4:33572498-33572517 | None:intergenic | 30.0% |
| AAAACTAATCCATACCCTCA+TGG | - | chr4.4:33570515-33570534 | MS.gene052344:CDS | 35.0% | |
| AAACACAGATAAATCCTACC+AGG | + | chr4.4:33568477-33568496 | None:intergenic | 35.0% | |
| AAACACAGATAAATCCTAGC+AGG | + | chr4.4:33568321-33568340 | None:intergenic | 35.0% | |
| AAATACCTTTCTGAGCATCT+TGG | + | chr4.4:33570144-33570163 | None:intergenic | 35.0% | |
| AACACAGATAAATCCTACCA+GGG | + | chr4.4:33568476-33568495 | None:intergenic | 35.0% | |
| AACACAGATAAATCCTAGCA+GGG | + | chr4.4:33568320-33568339 | None:intergenic | 35.0% | |
| AACTGAATCCGAATTTGGTT+TGG | + | chr4.4:33570955-33570974 | None:intergenic | 35.0% | |
| ACACATGTGTGTACAATAGA+AGG | + | chr4.4:33570853-33570872 | None:intergenic | 35.0% | |
| ACATGTGAACAGCAAAACAA+CGG | + | chr4.4:33573287-33573306 | None:intergenic | 35.0% | |
| AGCATCTTGGAATCAGAATT+GGG | + | chr4.4:33570131-33570150 | None:intergenic | 35.0% | |
| ATATCAGTGGCCTAAAAGAT+AGG | + | chr4.4:33573559-33573578 | None:intergenic | 35.0% | |
| ATCATACCCTATAAGCAGTT+AGG | + | chr4.4:33568605-33568624 | None:intergenic | 35.0% | |
| ATCGACAATTTAATAGCGAG+CGG | + | chr4.4:33569476-33569495 | None:intergenic | 35.0% | |
| ATTGGCGTAAACAAAATACC+CGG | + | chr4.4:33573524-33573543 | None:intergenic | 35.0% | |
| CAAATACCATTCAATAGCAG+AGG | - | chr4.4:33573605-33573624 | MS.gene052344:intron | 35.0% | |
| CTAGGATTTATCTGTGTTTC+TGG | - | chr4.4:33568322-33568341 | MS.gene052344:CDS | 35.0% | |
| CTTCTTCAATTACCAATCCA+GGG | - | chr4.4:33569091-33569110 | MS.gene052344:CDS | 35.0% | |
| GCCCCATTAGTATTACATTA+CGG | - | chr4.4:33572868-33572887 | MS.gene052344:CDS | 35.0% | |
| GCCGTAATGTAATACTAATG+GGG | + | chr4.4:33572872-33572891 | None:intergenic | 35.0% | |
| GCTGAAAACTATTTGATTCC+TGG | - | chr4.4:33572295-33572314 | MS.gene052344:intron | 35.0% | |
| GTAAACTACTGTAGTAGACT+TGG | + | chr4.4:33572554-33572573 | None:intergenic | 35.0% | |
| GTAGGATTTATCTGTGTTTC+TGG | - | chr4.4:33568478-33568497 | MS.gene052344:intron | 35.0% | |
| GTGCCGTAATGTAATACTAA+TGG | + | chr4.4:33572874-33572893 | None:intergenic | 35.0% | |
| TATCAGTGGCCTAAAAGATA+GGG | + | chr4.4:33573558-33573577 | None:intergenic | 35.0% | |
| TCAGGTACAGTAATGTGAAT+TGG | + | chr4.4:33570585-33570604 | None:intergenic | 35.0% | |
| TCATACCCTATAAGCAGTTA+GGG | + | chr4.4:33568604-33568623 | None:intergenic | 35.0% | |
| TCCTGTAGTAAAAACATCCA+GGG | + | chr4.4:33569952-33569971 | None:intergenic | 35.0% | |
| TCTTTATGACCTTGTGTTAC+TGG | - | chr4.4:33573319-33573338 | MS.gene052344:intron | 35.0% | |
| TGGCAATAGTCTAACTTTCT+AGG | - | chr4.4:33571965-33571984 | MS.gene052344:CDS | 35.0% | |
| TGTACCTGACTTATTTACTG+AGG | - | chr4.4:33570596-33570615 | MS.gene052344:intron | 35.0% | |
| TTATCATTCTCAGATGGTTG+AGG | - | chr4.4:33571366-33571385 | MS.gene052344:intron | 35.0% | |
| TTCACAGTAAAACAGATCTG+CGG | + | chr4.4:33572119-33572138 | None:intergenic | 35.0% | |
| TTCCTGTAGTAAAAACATCC+AGG | + | chr4.4:33569953-33569972 | None:intergenic | 35.0% | |
| TTCTGTGTGCTGAAATGATT+AGG | - | chr4.4:33570979-33570998 | MS.gene052344:CDS | 35.0% | |
| TTTGTAGAAACATGGAGTGA+TGG | - | chr4.4:33571464-33571483 | MS.gene052344:intron | 35.0% | |
| ! | AAAAGTGTAACCTTCAACAG+TGG | + | chr4.4:33572091-33572110 | None:intergenic | 35.0% |
| ! | AACGTAAATATGAGTTGGAG+CGG | - | chr4.4:33569343-33569362 | MS.gene052344:intron | 35.0% |
| ! | ACAGTGGTTTGGATAAGTAA+CGG | + | chr4.4:33572075-33572094 | None:intergenic | 35.0% |
| ! | ACGAGGACAAACTTTAAGAA+GGG | + | chr4.4:33570814-33570833 | None:intergenic | 35.0% |
| ! | ATGATCAATTTTGTTGCAGC+AGG | - | chr4.4:33570197-33570216 | MS.gene052344:intron | 35.0% |
| ! | CTATTGTCCCCTTTTCTTTA+GGG | - | chr4.4:33572683-33572702 | MS.gene052344:CDS | 35.0% |
| ! | CTTTTGTTAATTACCCTGGT+AGG | - | chr4.4:33568460-33568479 | MS.gene052344:intron | 35.0% |
| ! | GGTTTTTCTGATTTCCTTCA+TGG | - | chr4.4:33568982-33569001 | MS.gene052344:CDS | 35.0% |
| ! | TTTTCTCTGATGTACATGTG+TGG | - | chr4.4:33570245-33570264 | MS.gene052344:intron | 35.0% |
| !! | GACATTGTCTCTTTTGAAAG+AGG | - | chr4.4:33570679-33570698 | MS.gene052344:intron | 35.0% |
| !! | GGCCCTTTAAAATTGATTCA+AGG | + | chr4.4:33572851-33572870 | None:intergenic | 35.0% |
| !!! | GGTATGGATTAGTTTTTGGT+AGG | + | chr4.4:33570511-33570530 | None:intergenic | 35.0% |
| !!! | GTTTTGCTGTTCACATGTTA+TGG | - | chr4.4:33573289-33573308 | MS.gene052344:intron | 35.0% |
| !!! | TGAGGGTATGGATTAGTTTT+TGG | + | chr4.4:33570515-33570534 | None:intergenic | 35.0% |
| !!! | TGGATTAGTTTTTGGTAGGA+CGG | + | chr4.4:33570507-33570526 | None:intergenic | 35.0% |
| AAAATCATGCCTTGAGCATC+GGG | - | chr4.4:33569971-33569990 | MS.gene052344:intron | 40.0% | |
| AAAGAAAAGGGGACAATAGG+AGG | + | chr4.4:33572682-33572701 | None:intergenic | 40.0% | |
| AACGAGGTTACTATTGATCG+TGG | - | chr4.4:33572966-33572985 | MS.gene052344:intron | 40.0% | |
| AATTGGGGTTTCCATTCCTA+AGG | + | chr4.4:33570115-33570134 | None:intergenic | 40.0% | |
| ACATGCTCTGGTAATATCAG+TGG | + | chr4.4:33573572-33573591 | None:intergenic | 40.0% | |
| ACTCCCATTTCAAAGAGATC+TGG | + | chr4.4:33570905-33570924 | None:intergenic | 40.0% | |
| AGACCTTAGAGCATAGTCAA+AGG | + | chr4.4:33568652-33568671 | None:intergenic | 40.0% | |
| AGCTAATTACCATGAGGGTA+TGG | + | chr4.4:33570527-33570546 | None:intergenic | 40.0% | |
| AGGGTTGACATGAAGCAAAA+AGG | + | chr4.4:33571324-33571343 | None:intergenic | 40.0% | |
| AGGTATCATCCAGTAACACA+AGG | + | chr4.4:33573331-33573350 | None:intergenic | 40.0% | |
| ATACAAAGGCTGAGGATAGA+TGG | + | chr4.4:33571241-33571260 | None:intergenic | 40.0% | |
| ATAGATGCTGTCTGCACATT+TGG | + | chr4.4:33572643-33572662 | None:intergenic | 40.0% | |
| ATAGGGTATGATCACTCTGA+TGG | - | chr4.4:33568613-33568632 | MS.gene052344:intron | 40.0% | |
| CAAAGAATATGCAGTACTGC+CGG | + | chr4.4:33573084-33573103 | None:intergenic | 40.0% | |
| CAAGAGACCCTAAAGAAAAG+GGG | + | chr4.4:33572693-33572712 | None:intergenic | 40.0% | |
| CACATGTGTTGTGCTCTAAT+TGG | - | chr4.4:33570864-33570883 | MS.gene052344:intron | 40.0% | |
| CAGACAGCATCTATGTTCAA+AGG | - | chr4.4:33572649-33572668 | MS.gene052344:CDS | 40.0% | |
| CATCATTTACTTAAGTGCCC+AGG | + | chr4.4:33572316-33572335 | None:intergenic | 40.0% | |
| CATGTCAACCCTTGGTTAAT+TGG | - | chr4.4:33571332-33571351 | MS.gene052344:CDS | 40.0% | |
| CATGTGAACAGCAAAACAAC+GGG | + | chr4.4:33573286-33573305 | None:intergenic | 40.0% | |
| CCAAGAGACCCTAAAGAAAA+GGG | + | chr4.4:33572694-33572713 | None:intergenic | 40.0% | |
| CCTAAAGAAAAGGGGACAAT+AGG | + | chr4.4:33572685-33572704 | None:intergenic | 40.0% | |
| CGAAGTTGAAGGATACAGAA+AGG | + | chr4.4:33572727-33572746 | None:intergenic | 40.0% | |
| CTGATTTCCTTCATGGAACA+GGG | - | chr4.4:33568989-33569008 | MS.gene052344:CDS | 40.0% | |
| CTTATCCAAACCACTGTTGA+AGG | - | chr4.4:33572078-33572097 | MS.gene052344:intron | 40.0% | |
| GAAAATCATGCCTTGAGCAT+CGG | - | chr4.4:33569970-33569989 | MS.gene052344:intron | 40.0% | |
| GAGCATCTTGGAATCAGAAT+TGG | + | chr4.4:33570132-33570151 | None:intergenic | 40.0% | |
| GATAGTACTTGCACAGTCAT+CGG | + | chr4.4:33570470-33570489 | None:intergenic | 40.0% | |
| GATTCGGACTTCCTTTAACA+TGG | + | chr4.4:33572217-33572236 | None:intergenic | 40.0% | |
| GCATCTTGGAATCAGAATTG+GGG | + | chr4.4:33570130-33570149 | None:intergenic | 40.0% | |
| GCCTAAAAGATAGGGAATGT+GGG | + | chr4.4:33573550-33573569 | None:intergenic | 40.0% | |
| GCGAGAAGGTCAGAAAAAAA+TGG | + | chr4.4:33569780-33569799 | None:intergenic | 40.0% | |
| GCTTCTTCAATTACCAATCC+AGG | - | chr4.4:33569090-33569109 | MS.gene052344:CDS | 40.0% | |
| GGACATTTGATATGAGATGG+AGG | - | chr4.4:33572400-33572419 | MS.gene052344:intron | 40.0% | |
| GTCGCATTCAAACATCTGTA+AGG | - | chr4.4:33570300-33570319 | MS.gene052344:intron | 40.0% | |
| GTTAGTTACTTGTGGTGAAC+TGG | + | chr4.4:33572039-33572058 | None:intergenic | 40.0% | |
| GTTGACCTTGTGATAACTCT+TGG | - | chr4.4:33571887-33571906 | MS.gene052344:CDS | 40.0% | |
| TACCAGAGCATGTGACTTTA+CGG | - | chr4.4:33573579-33573598 | MS.gene052344:intron | 40.0% | |
| TATATCGACACAAGGTTCTC+AGG | + | chr4.4:33571642-33571661 | None:intergenic | 40.0% | |
| TCCAAGAGACCCTAAAGAAA+AGG | + | chr4.4:33572695-33572714 | None:intergenic | 40.0% | |
| TCCTTCAGCAACTTTCCTAA+GGG | + | chr4.4:33569289-33569308 | None:intergenic | 40.0% | |
| TCTGATTTCCTTCATGGAAC+AGG | - | chr4.4:33568988-33569007 | MS.gene052344:CDS | 40.0% | |
| TGACTCCCTAACTGCTTATA+GGG | - | chr4.4:33568596-33568615 | MS.gene052344:intron | 40.0% | |
| TGATTCCAAGATGCTCAGAA+AGG | - | chr4.4:33570136-33570155 | MS.gene052344:intron | 40.0% | |
| TGCACTGCTTTCTCAGAAAA+TGG | + | chr4.4:33569067-33569086 | None:intergenic | 40.0% | |
| TGTAACCTTCAACAGTGGTT+TGG | + | chr4.4:33572086-33572105 | None:intergenic | 40.0% | |
| TTATGATGATTGCTGGACGA+AGG | - | chr4.4:33572464-33572483 | MS.gene052344:intron | 40.0% | |
| TTCAACAGAAAAAGGCGAGA+AGG | + | chr4.4:33569794-33569813 | None:intergenic | 40.0% | |
| TTCCTTCAGCAACTTTCCTA+AGG | + | chr4.4:33569290-33569309 | None:intergenic | 40.0% | |
| TTCGTTTCAACTTCCAACTG+CGG | - | chr4.4:33571159-33571178 | MS.gene052344:intron | 40.0% | |
| TTCTTGCACAGCATTCATGA+GGG | - | chr4.4:33573749-33573768 | MS.gene052344:intron | 40.0% | |
| TTGACTCCCTAACTGCTTAT+AGG | - | chr4.4:33568595-33568614 | MS.gene052344:intron | 40.0% | |
| ! | AGGAGGATGTTGATAGAACA+TGG | + | chr4.4:33573463-33573482 | None:intergenic | 40.0% |
| ! | CAAAGTTATGGACTATCCCA+CGG | + | chr4.4:33568703-33568722 | None:intergenic | 40.0% |
| ! | CACGAGGACAAACTTTAAGA+AGG | + | chr4.4:33570815-33570834 | None:intergenic | 40.0% |
| ! | CCTATTGTCCCCTTTTCTTT+AGG | - | chr4.4:33572682-33572701 | MS.gene052344:CDS | 40.0% |
| ! | CTTTTAGTGCCAATTTCCGT+GGG | - | chr4.4:33568684-33568703 | MS.gene052344:intron | 40.0% |
| ! | GCAAGTACTATCGTGTTTTG+AGG | - | chr4.4:33570478-33570497 | MS.gene052344:intron | 40.0% |
| ! | TTTTGCTTCATGTCAACCCT+TGG | - | chr4.4:33571324-33571343 | MS.gene052344:CDS | 40.0% |
| !! | AAACTTCAATGGTGCTGCAA+AGG | - | chr4.4:33570631-33570650 | MS.gene052344:intron | 40.0% |
| !! | TCCCTGGATGTTTTTACTAC+AGG | - | chr4.4:33569948-33569967 | MS.gene052344:intron | 40.0% |
| !! | TTCAAGAAAGTACCTGAGGA+TGG | + | chr4.4:33573127-33573146 | None:intergenic | 40.0% |
| !!! | TTTGAAGACGGGGTTTTAGA+TGG | + | chr4.4:33573491-33573510 | None:intergenic | 40.0% |
| AACCTGCAGATTTGAAGACG+GGG | + | chr4.4:33573501-33573520 | None:intergenic | 45.0% | |
| ACCAGAGCATGTGACTTTAC+GGG | - | chr4.4:33573580-33573599 | MS.gene052344:intron | 45.0% | |
| ACCCTTAGGAAAGTTGCTGA+AGG | - | chr4.4:33569285-33569304 | MS.gene052344:CDS | 45.0% | |
| ACTGCATATTCTTTGGCAGC+TGG | - | chr4.4:33573089-33573108 | MS.gene052344:intron | 45.0% | |
| AGAAGGGACATGCTTGCTTA+TGG | + | chr4.4:33570798-33570817 | None:intergenic | 45.0% | |
| ATGAAACAATCTGCCGCAGT+TGG | + | chr4.4:33571175-33571194 | None:intergenic | 45.0% | |
| CAAGTGTTCTGTGGGAAGAA+TGG | - | chr4.4:33568821-33568840 | MS.gene052344:intron | 45.0% | |
| CAATAGCAGAGGATCTGCAT+GGG | - | chr4.4:33573616-33573635 | MS.gene052344:intron | 45.0% | |
| CCACGGAAATTGGCACTAAA+AGG | + | chr4.4:33568686-33568705 | None:intergenic | 45.0% | |
| CCTGACTTATTTACTGAGGC+AGG | - | chr4.4:33570600-33570619 | MS.gene052344:intron | 45.0% | |
| CCTGCCTCAGTAAATAAGTC+AGG | + | chr4.4:33570603-33570622 | None:intergenic | 45.0% | |
| CGAATTTCCCTGTTCCATGA+AGG | + | chr4.4:33568999-33569018 | None:intergenic | 45.0% | |
| CGGCAGTACTGCATATTCTT+TGG | - | chr4.4:33573082-33573101 | MS.gene052344:intron | 45.0% | |
| CTCCTCCAAGAGTTATCACA+AGG | + | chr4.4:33571895-33571914 | None:intergenic | 45.0% | |
| CTTCTTGCACAGCATTCATG+AGG | - | chr4.4:33573748-33573767 | MS.gene052344:intron | 45.0% | |
| GAACCTGCAGATTTGAAGAC+GGG | + | chr4.4:33573502-33573521 | None:intergenic | 45.0% | |
| GACCTTGTGATAACTCTTGG+AGG | - | chr4.4:33571890-33571909 | MS.gene052344:CDS | 45.0% | |
| GATAGGGAATGTGGGCAAAT+TGG | + | chr4.4:33573542-33573561 | None:intergenic | 45.0% | |
| GCAGATCCTCTGCTATTGAA+TGG | + | chr4.4:33573614-33573633 | None:intergenic | 45.0% | |
| GCATTCATGAGGGTCTTCAT+TGG | - | chr4.4:33573759-33573778 | MS.gene052344:intron | 45.0% | |
| GGAACCTGCAGATTTGAAGA+CGG | + | chr4.4:33573503-33573522 | None:intergenic | 45.0% | |
| GGACCTTTGACTATGCTCTA+AGG | - | chr4.4:33568646-33568665 | MS.gene052344:intron | 45.0% | |
| GGCCTAAAAGATAGGGAATG+TGG | + | chr4.4:33573551-33573570 | None:intergenic | 45.0% | |
| GTCTTCAAATCTGCAGGTTC+CGG | - | chr4.4:33573502-33573521 | MS.gene052344:intron | 45.0% | |
| GTGATAACTCTTGGAGGAGA+TGG | - | chr4.4:33571896-33571915 | MS.gene052344:CDS | 45.0% | |
| TAAGATGGTCATCAGAACCC+TGG | + | chr4.4:33569111-33569130 | None:intergenic | 45.0% | |
| TCAATAGCAGAGGATCTGCA+TGG | - | chr4.4:33573615-33573634 | MS.gene052344:intron | 45.0% | |
| TCACAAGCTCAATTCTCCCA+CGG | - | chr4.4:33568161-33568180 | MS.gene052344:CDS | 45.0% | |
| TCCATTCCTAAGGACGTCAT+GGG | + | chr4.4:33570105-33570124 | None:intergenic | 45.0% | |
| TCTTCAAATCTGCAGGTTCC+GGG | - | chr4.4:33573503-33573522 | MS.gene052344:intron | 45.0% | |
| TTCCATTCCTAAGGACGTCA+TGG | + | chr4.4:33570106-33570125 | None:intergenic | 45.0% | |
| TTGGAAGGATACAAAGGCTG+AGG | + | chr4.4:33571249-33571268 | None:intergenic | 45.0% | |
| TTTCCTAAGGGTCTTTGCGA+CGG | + | chr4.4:33569277-33569296 | None:intergenic | 45.0% | |
| TTTGTTCCCATGACGTCCTT+AGG | - | chr4.4:33570096-33570115 | MS.gene052344:CDS | 45.0% | |
| ! | AATATGAGTTGGAGCGGACA+CGG | - | chr4.4:33569349-33569368 | MS.gene052344:intron | 45.0% |
| ! | ATGGACTATCCCACGGAAAT+TGG | + | chr4.4:33568696-33568715 | None:intergenic | 45.0% |
| ! | CCTTTTAGTGCCAATTTCCG+TGG | - | chr4.4:33568683-33568702 | MS.gene052344:intron | 45.0% |
| ! | CGTCATTTGATGGCAAAGAC+AGG | - | chr4.4:33573639-33573658 | MS.gene052344:intron | 45.0% |
| ! | GCCCACATTCCCTATCTTTT+AGG | - | chr4.4:33573546-33573565 | MS.gene052344:intron | 45.0% |
| ! | GTATGATCACTCTGATGGTG+CGG | - | chr4.4:33568618-33568637 | MS.gene052344:intron | 45.0% |
| ! | TCAATATGAGCACCGTCTGT+GGG | + | chr4.4:33570932-33570951 | None:intergenic | 45.0% |
| !! | AGATGCATTGGTTTGCAGCA+TGG | - | chr4.4:33573679-33573698 | MS.gene052344:intron | 45.0% |
| !! | GCTCTTCAAGAAAGTACCTG+AGG | + | chr4.4:33573131-33573150 | None:intergenic | 45.0% |
| !! | TGACTATGCTCTAAGGTCTC+AGG | - | chr4.4:33568653-33568672 | MS.gene052344:intron | 45.0% |
| !!! | CCCTTTTCTTTAGGGTCTCT+TGG | - | chr4.4:33572691-33572710 | MS.gene052344:intron | 45.0% |
| AAAAGCTGCTGCTCAAGCTG+AGG | - | chr4.4:33569308-33569327 | MS.gene052344:intron | 50.0% | |
| AAATTCGAGTGTGACGTCGC+AGG | - | chr4.4:33569012-33569031 | MS.gene052344:CDS | 50.0% | |
| AACCCCGTCTTCAAATCTGC+AGG | - | chr4.4:33573496-33573515 | MS.gene052344:intron | 50.0% | |
| ACCCGTAAAGTCACATGCTC+TGG | + | chr4.4:33573584-33573603 | None:intergenic | 50.0% | |
| AGGAGATGGCACTGTCCTAT+GGG | - | chr4.4:33571910-33571929 | MS.gene052344:CDS | 50.0% | |
| AGGATCAATGGTCCATCCTC+AGG | - | chr4.4:33573112-33573131 | MS.gene052344:intron | 50.0% | |
| ATATGTGGAACCACGTGTCC+AGG | - | chr4.4:33571409-33571428 | MS.gene052344:intron | 50.0% | |
| CACAAGGTTCTCAGGTGCAA+TGG | + | chr4.4:33571634-33571653 | None:intergenic | 50.0% | |
| CCTTTGTCACACGTGTGCAA+GGG | - | chr4.4:33573033-33573052 | MS.gene052344:intron | 50.0% | |
| CTGCAAACCAATGCATCTCC+TGG | + | chr4.4:33573677-33573696 | None:intergenic | 50.0% | |
| CTTTGTCACACGTGTGCAAG+GGG | - | chr4.4:33573034-33573053 | MS.gene052344:intron | 50.0% | |
| GAAGGTTGAGCTACCATCTC+TGG | - | chr4.4:33572482-33572501 | MS.gene052344:intron | 50.0% | |
| GAATCTCCATGACAAGCCGT+AGG | + | chr4.4:33573719-33573738 | None:intergenic | 50.0% | |
| GACAGGAAACAGTTAGCACC+AGG | - | chr4.4:33573656-33573675 | MS.gene052344:intron | 50.0% | |
| GCATATTCTTTGGCAGCTGG+AGG | - | chr4.4:33573092-33573111 | MS.gene052344:intron | 50.0% | |
| GGAGAATTGAGCTTGTGAGG+AGG | + | chr4.4:33568159-33568178 | None:intergenic | 50.0% | |
| GTGGGAGAATTGAGCTTGTG+AGG | + | chr4.4:33568162-33568181 | None:intergenic | 50.0% | |
| GTTAGCACCAGGAGATGCAT+TGG | - | chr4.4:33573667-33573686 | MS.gene052344:intron | 50.0% | |
| GTTGCAGCAGGATTCCCTAT+TGG | - | chr4.4:33570209-33570228 | MS.gene052344:intron | 50.0% | |
| TCCCATGACGTCCTTAGGAA+TGG | - | chr4.4:33570101-33570120 | MS.gene052344:intron | 50.0% | |
| TCCTTTGTCACACGTGTGCA+AGG | - | chr4.4:33573032-33573051 | MS.gene052344:intron | 50.0% | |
| TCTGCATGGGCGTCATTTGA+TGG | - | chr4.4:33573629-33573648 | MS.gene052344:intron | 50.0% | |
| TCTTTGCGACGGCTAGAAGA+AGG | + | chr4.4:33569266-33569285 | None:intergenic | 50.0% | |
| TGGTCATCAGAACCCTGGAT+TGG | + | chr4.4:33569106-33569125 | None:intergenic | 50.0% | |
| TTTGGCAGCTGGAGGATCAA+TGG | - | chr4.4:33573100-33573119 | MS.gene052344:intron | 50.0% | |
| ! | AATATGAGCACCGTCTGTGG+GGG | + | chr4.4:33570930-33570949 | None:intergenic | 50.0% |
| ! | CAATATGAGCACCGTCTGTG+GGG | + | chr4.4:33570931-33570950 | None:intergenic | 50.0% |
| ! | GTCAATATGAGCACCGTCTG+TGG | + | chr4.4:33570933-33570952 | None:intergenic | 50.0% |
| !! | GGGATTGGTCCTGGATTAGT+CGG | - | chr4.4:33568754-33568773 | MS.gene052344:intron | 50.0% |
| !!! | GAAGACGGGGTTTTAGATGG+AGG | + | chr4.4:33573488-33573507 | None:intergenic | 50.0% |
| !!! | GGTTTTAGATGGAGGACAGG+AGG | + | chr4.4:33573480-33573499 | None:intergenic | 50.0% |
| AATCCCACCGTCTACTAGCG+GGG | + | chr4.4:33568740-33568759 | None:intergenic | 55.0% | |
| ACGTGTCCAGGTCGATCTTC+TGG | - | chr4.4:33571421-33571440 | MS.gene052344:intron | 55.0% | |
| ACTCCTCCAGAAGATCGACC+TGG | + | chr4.4:33571430-33571449 | None:intergenic | 55.0% | |
| AGAAGATCGACCTGGACACG+TGG | + | chr4.4:33571422-33571441 | None:intergenic | 55.0% | |
| AGCAGAGCGCAGTAGTAAGC+AGG | - | chr4.4:33570714-33570733 | MS.gene052344:intron | 55.0% | |
| CAAGATCAGCCCGATGCTCA+AGG | + | chr4.4:33569983-33570002 | None:intergenic | 55.0% | |
| CAATCCCACCGTCTACTAGC+GGG | + | chr4.4:33568741-33568760 | None:intergenic | 55.0% | |
| CCAATCCCACCGTCTACTAG+CGG | + | chr4.4:33568742-33568761 | None:intergenic | 55.0% | |
| CCATGACAAGCCGTAGGAAC+AGG | + | chr4.4:33573713-33573732 | None:intergenic | 55.0% | |
| CCCTTGCACACGTGTGACAA+AGG | + | chr4.4:33573036-33573055 | None:intergenic | 55.0% | |
| CCTGTTCCTACGGCTTGTCA+TGG | - | chr4.4:33573710-33573729 | MS.gene052344:intron | 55.0% | |
| CTTACTACTGCGCTCTGCTG+TGG | + | chr4.4:33570713-33570732 | None:intergenic | 55.0% | |
| GAGGAGATGGCACTGTCCTA+TGG | - | chr4.4:33571909-33571928 | MS.gene052344:CDS | 55.0% | |
| TAGCCGTCGCAAAGACCCTT+AGG | - | chr4.4:33569271-33569290 | MS.gene052344:CDS | 55.0% | |
| TGTCCAGGTCGATCTTCTGG+AGG | - | chr4.4:33571424-33571443 | MS.gene052344:intron | 55.0% | |
| TTGGGTTCCCCGCTAGTAGA+CGG | - | chr4.4:33568730-33568749 | MS.gene052344:intron | 55.0% | |
| ! | AAGGGGACAATAGGAGGCAC+TGG | + | chr4.4:33572676-33572695 | None:intergenic | 55.0% |
| ! | CACTCTGATGGTGCGGACTT+GGG | - | chr4.4:33568625-33568644 | MS.gene052344:intron | 55.0% |
| ! | TCACTCTGATGGTGCGGACT+TGG | - | chr4.4:33568624-33568643 | MS.gene052344:intron | 55.0% |
| !! | GTCCTGGATTAGTCGGTCGT+CGG | - | chr4.4:33568761-33568780 | MS.gene052344:intron | 55.0% |
| !!! | CGGGGTTTTAGATGGAGGAC+AGG | + | chr4.4:33573483-33573502 | None:intergenic | 55.0% |
| ACAAGCCGTAGGAACAGGCC+AGG | + | chr4.4:33573708-33573727 | None:intergenic | 60.0% | |
| ATGGGAGTCACCCCCACAGA+CGG | - | chr4.4:33570917-33570936 | MS.gene052344:intron | 60.0% | |
| CAAGCCGTAGGAACAGGCCA+GGG | + | chr4.4:33573707-33573726 | None:intergenic | 60.0% | |
| CCGCTAGTAGACGGTGGGAT+TGG | - | chr4.4:33568739-33568758 | MS.gene052344:intron | 60.0% | |
| CTCAAGCTGAGGCTGCCGAA+TGG | - | chr4.4:33569319-33569338 | MS.gene052344:intron | 60.0% | |
| GTCACACGTGTGCAAGGGGA+TGG | - | chr4.4:33573038-33573057 | MS.gene052344:intron | 60.0% | |
| GTCCGACGACCGACTAATCC+AGG | + | chr4.4:33568766-33568785 | None:intergenic | 60.0% | |
| GTGACGTCGCAGGCTGAGAA+TGG | - | chr4.4:33569022-33569041 | MS.gene052344:CDS | 60.0% | |
| GTTCCCCGCTAGTAGACGGT+GGG | - | chr4.4:33568734-33568753 | MS.gene052344:intron | 60.0% | |
| ! | TGGTTTGCAGCATGGCACCC+TGG | - | chr4.4:33573687-33573706 | MS.gene052344:intron | 60.0% |
| !! | GGATTAGTCGGTCGTCGGAC+TGG | - | chr4.4:33568766-33568785 | MS.gene052344:intron | 60.0% |
| !! | GTAGACGGTGGGATTGGTCC+TGG | - | chr4.4:33568745-33568764 | MS.gene052344:intron | 60.0% |
| GGCACCCTGGCCTGTTCCTA+CGG | - | chr4.4:33573700-33573719 | MS.gene052344:intron | 65.0% | |
| GGTTCCCCGCTAGTAGACGG+TGG | - | chr4.4:33568733-33568752 | MS.gene052344:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 33568150 | 33573826 | 33568150 | ID=MS.gene052344 |
| chr4.4 | mRNA | 33568150 | 33573826 | 33568150 | ID=MS.gene052344.t1;Parent=MS.gene052344 |
| chr4.4 | exon | 33573794 | 33573826 | 33573794 | ID=MS.gene052344.t1.exon1;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33573794 | 33573826 | 33573794 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33572822 | 33572966 | 33572822 | ID=MS.gene052344.t1.exon2;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33572822 | 33572966 | 33572822 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33572583 | 33572702 | 33572583 | ID=MS.gene052344.t1.exon3;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33572583 | 33572702 | 33572583 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33571819 | 33572006 | 33571819 | ID=MS.gene052344.t1.exon4;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33571819 | 33572006 | 33571819 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33571241 | 33571354 | 33571241 | ID=MS.gene052344.t1.exon5;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33571241 | 33571354 | 33571241 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33570976 | 33571070 | 33570976 | ID=MS.gene052344.t1.exon6;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33570976 | 33571070 | 33570976 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33570491 | 33570597 | 33570491 | ID=MS.gene052344.t1.exon7;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33570491 | 33570597 | 33570491 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33570045 | 33570118 | 33570045 | ID=MS.gene052344.t1.exon8;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33570045 | 33570118 | 33570045 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33569246 | 33569324 | 33569246 | ID=MS.gene052344.t1.exon9;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33569246 | 33569324 | 33569246 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33568843 | 33569150 | 33568843 | ID=MS.gene052344.t1.exon10;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33568843 | 33569150 | 33568843 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| chr4.4 | exon | 33568150 | 33568458 | 33568150 | ID=MS.gene052344.t1.exon11;Parent=MS.gene052344.t1 |
| chr4.4 | CDS | 33568150 | 33568458 | 33568150 | ID=cds.MS.gene052344.t1;Parent=MS.gene052344.t1 |
| Gene Sequence |
| Protein sequence |
