Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29010.t1 | XP_013460842.1 | 96.1 | 543 | 21 | 0 | 1 | 543 | 1 | 543 | 4.40E-280 | 973.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29010.t1 | B0CBB0 | 49.9 | 453 | 209 | 5 | 93 | 543 | 19 | 455 | 3.5e-121 | 436.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29010.t1 | G8A389 | 96.1 | 543 | 21 | 0 | 1 | 543 | 1 | 543 | 3.1e-280 | 973.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050507 | MS.gene29010 | 0.800702 | 1.27E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29010.t1 | MTR_3g073790 | 97.238 | 543 | 15 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1086 |
| MS.gene29010.t1 | MTR_4g065030 | 41.353 | 133 | 65 | 4 | 297 | 422 | 349 | 475 | 8.13e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29010.t1 | AT1G78010 | 69.057 | 530 | 137 | 6 | 30 | 543 | 42 | 560 | 0.0 | 708 |
| MS.gene29010.t1 | AT3G12080 | 39.855 | 138 | 70 | 4 | 297 | 427 | 371 | 502 | 6.52e-18 | 87.8 |
| MS.gene29010.t1 | AT3G12080 | 39.855 | 138 | 70 | 4 | 297 | 427 | 371 | 502 | 8.21e-18 | 87.0 |
Find 127 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGGAATCGTTCGTCTTTC+GGG | 0.204168 | 3.2:+66554966 | MS.gene29010:CDS |
| TCTAGATTTGAATGGGATTA+TGG | 0.220713 | 3.2:+66556853 | MS.gene29010:CDS |
| GGTATGGATGGCATTGCTGC+TGG | 0.224502 | 3.2:+66559210 | MS.gene29010:CDS |
| CGTCGGAATCGTTCGTCTTT+CGG | 0.229533 | 3.2:+66554965 | MS.gene29010:CDS |
| GCTTCTGCAATCTGGATTAC+AGG | 0.317719 | 3.2:+66556937 | MS.gene29010:CDS |
| GTATGGATGGCATTGCTGCT+GGG | 0.332288 | 3.2:+66559211 | MS.gene29010:CDS |
| TATGACAAGCTTCTGCAATC+TGG | 0.337068 | 3.2:+66556929 | MS.gene29010:CDS |
| TGCAGTATCAAGAAGGGTTA+TGG | 0.339601 | 3.2:-66557567 | None:intergenic |
| GAAGAAACGGTTGTTGGTTT+TGG | 0.343381 | 3.2:-66554739 | None:intergenic |
| GAGTAAACGTTCGTCTTTGT+TGG | 0.361695 | 3.2:-66554847 | None:intergenic |
| TTGTTGACCACAAGGATTAC+CGG | 0.372060 | 3.2:-66559048 | None:intergenic |
| TTCTTGATACTGCAGGCATC+AGG | 0.393317 | 3.2:+66557576 | MS.gene29010:CDS |
| GAGATTACAATCATCAATAA+AGG | 0.397427 | 3.2:+66559583 | MS.gene29010:CDS |
| GGCTGCTGCTGATGCAGCAC+TGG | 0.398376 | 3.2:+66556556 | MS.gene29010:CDS |
| GCAATAGTTACTGAAATTGC+TGG | 0.402773 | 3.2:+66557497 | MS.gene29010:CDS |
| ATATTTGGCAAGTTCTGTAT+TGG | 0.403495 | 3.2:+66559707 | MS.gene29010:CDS |
| ATCAGCAGCAGCCACAGATT+TGG | 0.403518 | 3.2:-66556546 | None:intergenic |
| TGTTGAATACGGTGTCGTTT+TGG | 0.405449 | 3.2:+66555061 | MS.gene29010:CDS |
| CTTAGGATTTGTTTAGAAGC+TGG | 0.417643 | 3.2:+66555206 | MS.gene29010:CDS |
| GCAGTATCAAGAAGGGTTAT+GGG | 0.421712 | 3.2:-66557566 | None:intergenic |
| GAGGGCAGTCTTAGAGATTG+TGG | 0.422797 | 3.2:+66559188 | MS.gene29010:CDS |
| CTGTAACGACAGGAATCAAC+TGG | 0.423468 | 3.2:+66559015 | MS.gene29010:intron |
| AGGCTTGACTTGCCAACATT+AGG | 0.424454 | 3.2:-66557169 | None:intergenic |
| GAAGCAAGTGTCAACATTAA+CGG | 0.427426 | 3.2:+66557539 | MS.gene29010:CDS |
| CGAACGATTCCGACGGCGGC+AGG | 0.431999 | 3.2:-66554957 | None:intergenic |
| GCAGCCATTGTAACATCCTT+AGG | 0.432367 | 3.2:+66554927 | MS.gene29010:CDS |
| TAATCTCACAAGTGCTTCCT+TGG | 0.434972 | 3.2:-66559567 | None:intergenic |
| TTCTTGCAGATAGCAATTGT+TGG | 0.442984 | 3.2:+66557142 | MS.gene29010:intron |
| TATGGATGGCATTGCTGCTG+GGG | 0.443424 | 3.2:+66559212 | MS.gene29010:CDS |
| CTTTGCTCCATGCATTAAGA+AGG | 0.448231 | 3.2:-66557189 | None:intergenic |
| TCTCAACATCTTGTGACATA+TGG | 0.450538 | 3.2:-66556886 | None:intergenic |
| TCGCAGATGGACCGTCAATC+AGG | 0.455562 | 3.2:+66559236 | MS.gene29010:CDS |
| CGCCACGTGGCGGTAGTTGG+TGG | 0.456681 | 3.2:-66554765 | None:intergenic |
| TGCCACCTCTAGATTTGAAT+GGG | 0.457425 | 3.2:+66556846 | MS.gene29010:CDS |
| TGTGTTTGCGTCGTGTGCTT+AGG | 0.462345 | 3.2:+66555189 | MS.gene29010:CDS |
| GACAATGTGAACAACTTGTT+CGG | 0.471067 | 3.2:+66559543 | MS.gene29010:CDS |
| AGGTGCTGATTTAATTATCA+TGG | 0.471586 | 3.2:+66558079 | MS.gene29010:CDS |
| AATAAAGGAAGAACTACCTA+TGG | 0.476692 | 3.2:+66559598 | MS.gene29010:CDS |
| TCCCATTCAGTCTCTGCACA+AGG | 0.479917 | 3.2:-66559084 | None:intergenic |
| CTCTCTCAGGCTGAAAATGT+TGG | 0.480018 | 3.2:+66556509 | MS.gene29010:CDS |
| AAGACATCAAACTTCTTGAA+AGG | 0.496497 | 3.2:+66558132 | MS.gene29010:CDS |
| AACGATTCCGACGGCGGCAG+GGG | 0.497132 | 3.2:-66554955 | None:intergenic |
| ACTAGTCATGTTGTTGAATA+CGG | 0.499306 | 3.2:+66555050 | MS.gene29010:CDS |
| TAAGTCTTGTAATCCTTGAC+TGG | 0.500007 | 3.2:-66559163 | None:intergenic |
| ATGGCTGTGAGTGCTGTTGA+AGG | 0.503661 | 3.2:+66558098 | MS.gene29010:CDS |
| ATGCCACCTCTAGATTTGAA+TGG | 0.505081 | 3.2:+66556845 | MS.gene29010:CDS |
| CCGCACGCGGTGTCTATCGC+GGG | 0.507948 | 3.2:+66554990 | MS.gene29010:CDS |
| TGACGCCACGTGGCGGTAGT+TGG | 0.510315 | 3.2:-66554768 | None:intergenic |
| AGTCTTAGAGATTGTGGGTA+TGG | 0.511281 | 3.2:+66559194 | MS.gene29010:CDS |
| TGGAGTGAAGAAACGGTTGT+TGG | 0.515841 | 3.2:-66554745 | None:intergenic |
| AGCCTTGTGCAGAGACTGAA+TGG | 0.517001 | 3.2:+66559082 | MS.gene29010:CDS |
| AGGGATGCTGCATTGTCACT+TGG | 0.519129 | 3.2:+66559641 | MS.gene29010:CDS |
| TGCAGCACTGGAAGGAATCC+AGG | 0.519179 | 3.2:+66556568 | MS.gene29010:CDS |
| ATGATATCATACCTGATTGA+CGG | 0.519741 | 3.2:-66559247 | None:intergenic |
| TGGTCGTCTGGATCTCTCTC+AGG | 0.522857 | 3.2:+66556496 | MS.gene29010:CDS |
| GAACGATTCCGACGGCGGCA+GGG | 0.524304 | 3.2:-66554956 | None:intergenic |
| TTGTCACTTGGACAGATAAG+TGG | 0.525014 | 3.2:+66559653 | MS.gene29010:CDS |
| TTAGAGATTGTGGGTATGGA+TGG | 0.532667 | 3.2:+66559198 | MS.gene29010:CDS |
| TATTCAACAACATGACTAGT+AGG | 0.533705 | 3.2:-66555047 | None:intergenic |
| TGTTGAGAATGCATTGGAAA+CGG | 0.536515 | 3.2:+66556901 | MS.gene29010:CDS |
| ATAACCCTTCTTGATACTGC+AGG | 0.539605 | 3.2:+66557569 | MS.gene29010:CDS |
| TGAAAGGATTCAATCCGCTA+AGG | 0.542039 | 3.2:+66558148 | MS.gene29010:CDS |
| CGATCTGAAGCTGCTGCTAG+AGG | 0.542217 | 3.2:+66558059 | MS.gene29010:CDS |
| ACATGTGCTGTAACCAGTCA+AGG | 0.542704 | 3.2:+66559150 | MS.gene29010:CDS |
| TCCGCACGCGGTGTCTATCG+CGG | 0.544538 | 3.2:+66554989 | MS.gene29010:CDS |
| TGTCACTTGGACAGATAAGT+GGG | 0.555119 | 3.2:+66559654 | MS.gene29010:CDS |
| ATTGTTGGCCGTCCTAATGT+TGG | 0.555329 | 3.2:+66557157 | MS.gene29010:CDS |
| AGGGCAGTCTTAGAGATTGT+GGG | 0.556340 | 3.2:+66559189 | MS.gene29010:CDS |
| GCCACATGTTTCTCGCGGGT+CGG | 0.564172 | 3.2:-66555022 | None:intergenic |
| TGTTGACCACAAGGATTACC+GGG | 0.564759 | 3.2:-66559047 | None:intergenic |
| GCTGCTGATGCAGCACTGGA+AGG | 0.565208 | 3.2:+66556560 | MS.gene29010:CDS |
| GTTGTTGAACTTCAGTGTCA+TGG | 0.566189 | 3.2:+66555158 | MS.gene29010:CDS |
| CTGTGAGTGCTGTTGAAGGG+TGG | 0.571399 | 3.2:+66558102 | MS.gene29010:CDS |
| AGTCAAGCCTTCTTAATGCA+TGG | 0.572156 | 3.2:+66557182 | MS.gene29010:CDS |
| ATGGATGGCATTGCTGCTGG+GGG | 0.572959 | 3.2:+66559213 | MS.gene29010:CDS |
| CGATGGAAATGTTGTTGATG+AGG | 0.575590 | 3.2:+66555088 | MS.gene29010:CDS |
| TTGTTGAACTTCAGTGTCAT+GGG | 0.576919 | 3.2:+66555159 | MS.gene29010:CDS |
| TGATGCCTGCAGTATCAAGA+AGG | 0.577067 | 3.2:-66557574 | None:intergenic |
| TCGTCTTTCGGGTCCGCACG+CGG | 0.577355 | 3.2:+66554977 | MS.gene29010:CDS |
| TATATTTGATAAAACCTCCT+CGG | 0.579088 | 3.2:-66559687 | None:intergenic |
| GCCTTGTGCAGAGACTGAAT+GGG | 0.579349 | 3.2:+66559083 | MS.gene29010:CDS |
| TAATTGTGGCAAAACCTTAG+CGG | 0.579881 | 3.2:-66558162 | None:intergenic |
| AAGGATTACAAGACTTAGAG+AGG | 0.583392 | 3.2:+66559169 | MS.gene29010:CDS |
| TACGACCTCGGTGCTAACAT+CGG | 0.589711 | 3.2:-66555122 | None:intergenic |
| ATCAACTGGATCTTCAACCC+CGG | 0.594015 | 3.2:+66559029 | MS.gene29010:CDS |
| TAGTTGGTGGAGTGAAGAAA+CGG | 0.597002 | 3.2:-66554752 | None:intergenic |
| GGCCGCCACATGTTTCTCGC+GGG | 0.600817 | 3.2:-66555026 | None:intergenic |
| ACTGATTGCGGCCAAATCTG+TGG | 0.601287 | 3.2:+66556535 | MS.gene29010:CDS |
| ACAAGATGTTGAGAATGCAT+TGG | 0.601302 | 3.2:+66556895 | MS.gene29010:CDS |
| CAGAACCAGAGCGATGGCCA+TGG | 0.602088 | 3.2:+66554674 | None:intergenic |
| ACGATTCCGACGGCGGCAGG+GGG | 0.602863 | 3.2:-66554954 | None:intergenic |
| AATCTATCTTGTTGACCACA+AGG | 0.604604 | 3.2:-66559056 | None:intergenic |
| TGGCTGTGAGTGCTGTTGAA+GGG | 0.604980 | 3.2:+66558099 | MS.gene29010:CDS |
| TCTTGATACTGCAGGCATCA+GGG | 0.606241 | 3.2:+66557577 | MS.gene29010:CDS |
| AGGCCGCCACATGTTTCTCG+CGG | 0.615162 | 3.2:-66555027 | None:intergenic |
| ATAATCCCATTCAAATCTAG+AGG | 0.615783 | 3.2:-66556851 | None:intergenic |
| GGAGCAACACTTGCTCAACC+AGG | 0.623258 | 3.2:+66555227 | MS.gene29010:CDS |
| TCCGACCCGCGAGAAACATG+TGG | 0.624515 | 3.2:+66555021 | MS.gene29010:CDS |
| CAGTATCAAGAAGGGTTATG+GGG | 0.625181 | 3.2:-66557565 | None:intergenic |
| AAGACGAACGATTCCGACGG+CGG | 0.629919 | 3.2:-66554961 | None:intergenic |
| TGAACAACTTGTTCGGACCA+AGG | 0.630361 | 3.2:+66559550 | MS.gene29010:CDS |
| ATCCCATTCAAATCTAGAGG+TGG | 0.637267 | 3.2:-66556848 | None:intergenic |
| TTGACTTGCCAACATTAGGA+CGG | 0.637499 | 3.2:-66557165 | None:intergenic |
| TTCAACCCCGGTAATCCTTG+TGG | 0.639182 | 3.2:+66559041 | MS.gene29010:CDS |
| CAGGGACACTGATGACATTG+TGG | 0.639357 | 3.2:+66557595 | MS.gene29010:CDS |
| GCAGAGACTGAATGGGACAA+AGG | 0.640900 | 3.2:+66559090 | MS.gene29010:CDS |
| GATGCCTGCAGTATCAAGAA+GGG | 0.640954 | 3.2:-66557573 | None:intergenic |
| ACCGCCTAAGGATGTTACAA+TGG | 0.656047 | 3.2:-66554931 | None:intergenic |
| AGGATTACAAGACTTAGAGA+GGG | 0.656413 | 3.2:+66559170 | MS.gene29010:CDS |
| CGAAAGACGAACGATTCCGA+CGG | 0.662368 | 3.2:-66554964 | None:intergenic |
| GCGGAAAGAAGACATAGCCA+TGG | 0.667622 | 3.2:-66554691 | None:intergenic |
| CCCGCGATAGACACCGCGTG+CGG | 0.668512 | 3.2:-66554990 | None:intergenic |
| AAGAAGAGAGTGACGCCACG+TGG | 0.671207 | 3.2:-66554778 | None:intergenic |
| GTATGTGACGAAATATAATG+CGG | 0.675794 | 3.2:-66554710 | None:intergenic |
| AAGTGGGGAAGATATATCCG+AGG | 0.686406 | 3.2:+66559670 | MS.gene29010:CDS |
| GCCATTGTAACATCCTTAGG+CGG | 0.688294 | 3.2:+66554930 | MS.gene29010:CDS |
| AAATGTTGGAAAACTGATTG+CGG | 0.689769 | 3.2:+66556523 | MS.gene29010:CDS |
| GACCCGCGAGAAACATGTGG+CGG | 0.697263 | 3.2:+66555024 | MS.gene29010:CDS |
| TGTTGTTGATGAGGTAATAG+CGG | 0.700226 | 3.2:+66555097 | MS.gene29010:CDS |
| CTCCACCAACTACCGCCACG+TGG | 0.700533 | 3.2:+66554763 | MS.gene29010:CDS |
| TGGGGAAGATATATCCGAGG+AGG | 0.703973 | 3.2:+66559673 | MS.gene29010:CDS |
| AAGAGAGTGACGCCACGTGG+CGG | 0.706225 | 3.2:-66554775 | None:intergenic |
| TGTTGAGTTTGCAACAACGT+CGG | 0.713642 | 3.2:-66554898 | None:intergenic |
| TCTTCACGAGTATACGACCT+CGG | 0.721250 | 3.2:-66555134 | None:intergenic |
| GTCACTTGGACAGATAAGTG+GGG | 0.732820 | 3.2:+66559655 | MS.gene29010:CDS |
| GTTGACCACAAGGATTACCG+GGG | 0.737939 | 3.2:-66559046 | None:intergenic |
| CGGTGCCGATGTTAGCACCG+AGG | 0.778177 | 3.2:+66555117 | MS.gene29010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCACTTATAATTTAA+AGG | - | chr3.2:66558248-66558267 | None:intergenic | 10.0% |
| !! | CTTTATCAAATTATTAAATA+GGG | - | chr3.2:66558603-66558622 | None:intergenic | 10.0% |
| !! | TAACTTATATAAAAATAGTT+TGG | + | chr3.2:66556081-66556100 | MS.gene29010:intron | 10.0% |
| !! | TCTTTATCAAATTATTAAAT+AGG | - | chr3.2:66558604-66558623 | None:intergenic | 10.0% |
| !!! | AAAAATTTGCTATATTTTTA+GGG | + | chr3.2:66558560-66558579 | MS.gene29010:intron | 10.0% |
| !!! | AAATATAACATTTTCTTATA+TGG | + | chr3.2:66558627-66558646 | MS.gene29010:intron | 10.0% |
| !!! | ATTATTTTCATATAAGTTTT+AGG | - | chr3.2:66556208-66556227 | None:intergenic | 10.0% |
| !!! | TAAAAATTTGCTATATTTTT+AGG | + | chr3.2:66558559-66558578 | MS.gene29010:intron | 10.0% |
| !! | ACATTAATATGAACATAAAT+TGG | - | chr3.2:66558352-66558371 | None:intergenic | 15.0% |
| !! | AGTAAATAAGTAAAGTAATT+GGG | - | chr3.2:66557220-66557239 | None:intergenic | 15.0% |
| !! | ATATATGTTAATATGTAGAA+TGG | + | chr3.2:66556405-66556424 | MS.gene29010:intron | 15.0% |
| !! | TAGTAAATAAGTAAAGTAAT+TGG | - | chr3.2:66557221-66557240 | None:intergenic | 15.0% |
| !! | TCATATTAAGATTAATAAGA+GGG | - | chr3.2:66557120-66557139 | None:intergenic | 15.0% |
| !! | TTCATATTAAGATTAATAAG+AGG | - | chr3.2:66557121-66557140 | None:intergenic | 15.0% |
| !!! | AAAGCTGAATATTTTTATAT+AGG | + | chr3.2:66557840-66557859 | MS.gene29010:intron | 15.0% |
| !!! | AATTTTTTAACCTTTTCATT+GGG | + | chr3.2:66559305-66559324 | MS.gene29010:intron | 15.0% |
| !!! | ATTATTTTATGATGGTTAAT+TGG | + | chr3.2:66557318-66557337 | MS.gene29010:intron | 15.0% |
| !!! | GTGATTTTATAATAAGTAAA+TGG | + | chr3.2:66557690-66557709 | MS.gene29010:intron | 15.0% |
| !!! | TTTACTTCATTATTTTATGA+TGG | + | chr3.2:66557310-66557329 | MS.gene29010:intron | 15.0% |
| !! | AAATGGAATAAAGATAATTG+TGG | - | chr3.2:66558179-66558198 | None:intergenic | 20.0% |
| !! | ATTAAATTGTTTACCGAAAA+AGG | + | chr3.2:66556181-66556200 | MS.gene29010:intron | 20.0% |
| !! | ATTATAAAATCACAGTTGAT+GGG | - | chr3.2:66557683-66557702 | None:intergenic | 20.0% |
| !! | ATTTCTTGAACATAGTAATA+TGG | - | chr3.2:66558475-66558494 | None:intergenic | 20.0% |
| !! | CTTGTTCATGATATTTAATA+GGG | + | chr3.2:66558205-66558224 | MS.gene29010:intron | 20.0% |
| !! | TATTATAAAATCACAGTTGA+TGG | - | chr3.2:66557684-66557703 | None:intergenic | 20.0% |
| !! | TCTTGTTCATGATATTTAAT+AGG | + | chr3.2:66558204-66558223 | MS.gene29010:intron | 20.0% |
| !! | TGACTATAACTGAAATAAAA+CGG | + | chr3.2:66557753-66557772 | MS.gene29010:intron | 20.0% |
| !! | TGTTGTATAATATTCAAACA+TGG | + | chr3.2:66555951-66555970 | MS.gene29010:intron | 20.0% |
| !! | TTAATAACAATTAACATACC+TGG | - | chr3.2:66555248-66555267 | None:intergenic | 20.0% |
| !! | TTAGTCCCTAAAAAATAAAA+CGG | - | chr3.2:66558537-66558556 | None:intergenic | 20.0% |
| !! | TTATGCTTATTTGTGAAAAT+GGG | + | chr3.2:66559408-66559427 | MS.gene29010:intron | 20.0% |
| !! | TTTATGCTTATTTGTGAAAA+TGG | + | chr3.2:66559407-66559426 | MS.gene29010:intron | 20.0% |
| !!! | AAACAAAATGAAATTTTGTG+AGG | + | chr3.2:66558500-66558519 | MS.gene29010:intron | 20.0% |
| !!! | AAATAAGATTAGTTAGATAC+AGG | + | chr3.2:66557910-66557929 | MS.gene29010:intron | 20.0% |
| !!! | AACTTTTTCGTTTTGTTTTT+TGG | + | chr3.2:66558316-66558335 | MS.gene29010:intron | 20.0% |
| !!! | AATAAGATTAGTTAGATACA+GGG | + | chr3.2:66557911-66557930 | MS.gene29010:intron | 20.0% |
| !!! | CAATTTTTTAACCTTTTCAT+TGG | + | chr3.2:66559304-66559323 | MS.gene29010:intron | 20.0% |
| !!! | GAGGTTTTATCAAATATATT+TGG | + | chr3.2:66559692-66559711 | MS.gene29010:CDS | 20.0% |
| !!! | TAGTTCTCAATTTTTTGAAA+TGG | + | chr3.2:66557871-66557890 | MS.gene29010:intron | 20.0% |
| !!! | TCTTTATTTTGACATTAAAC+TGG | + | chr3.2:66558917-66558936 | MS.gene29010:intron | 20.0% |
| !!! | TGTAAAATCTTTAGTGTTTT+TGG | - | chr3.2:66558887-66558906 | None:intergenic | 20.0% |
| !!! | TTTTTTATTGTCTTACAACA+TGG | - | chr3.2:66558962-66558981 | None:intergenic | 20.0% |
| ! | AAACTCAAACTAGATGTAAA+AGG | + | chr3.2:66559380-66559399 | MS.gene29010:intron | 25.0% |
| ! | AAATACTGCTTAATCAAATC+AGG | - | chr3.2:66557949-66557968 | None:intergenic | 25.0% |
| ! | AACTCCACAATTTATTTAAG+GGG | + | chr3.2:66557347-66557366 | MS.gene29010:intron | 25.0% |
| ! | AATCAGGTATGATATCATAT+TGG | + | chr3.2:66559252-66559271 | MS.gene29010:intron | 25.0% |
| ! | AATCTCTAGATCTTTCTTAA+TGG | - | chr3.2:66555831-66555850 | None:intergenic | 25.0% |
| ! | ACATGGTAGAAAATAACATT+AGG | - | chr3.2:66558945-66558964 | None:intergenic | 25.0% |
| ! | ATAGTAATATGGACATACAA+AGG | - | chr3.2:66558464-66558483 | None:intergenic | 25.0% |
| ! | GAACTCCACAATTTATTTAA+GGG | + | chr3.2:66557346-66557365 | MS.gene29010:intron | 25.0% |
| ! | GAGATTACAATCATCAATAA+AGG | + | chr3.2:66559583-66559602 | MS.gene29010:CDS | 25.0% |
| ! | TAAAATAAGCCGAAAACATA+AGG | - | chr3.2:66555277-66555296 | None:intergenic | 25.0% |
| ! | TAACCAAAACAATTCTATGT+GGG | + | chr3.2:66557054-66557073 | MS.gene29010:intron | 25.0% |
| ! | TAGTCCCTAAAAAATAAAAC+GGG | - | chr3.2:66558536-66558555 | None:intergenic | 25.0% |
| ! | TATATTTGATAAAACCTCCT+CGG | - | chr3.2:66559690-66559709 | None:intergenic | 25.0% |
| ! | TCCAAAAGAAATGACAATAT+AGG | + | chr3.2:66555600-66555619 | MS.gene29010:intron | 25.0% |
| ! | TGAACTCCACAATTTATTTA+AGG | + | chr3.2:66557345-66557364 | MS.gene29010:intron | 25.0% |
| ! | TGTGATATTTGTATTTCCAT+AGG | + | chr3.2:66556028-66556047 | MS.gene29010:intron | 25.0% |
| ! | TTAACCAAAACAATTCTATG+TGG | + | chr3.2:66557053-66557072 | MS.gene29010:intron | 25.0% |
| ! | TTAGTCCCTAAAAAATAAAG+CGG | + | chr3.2:66558272-66558291 | MS.gene29010:intron | 25.0% |
| ! | TTGCTCTGACTTTAATTATT+GGG | + | chr3.2:66555541-66555560 | MS.gene29010:intron | 25.0% |
| ! | TTTGATTAAGCAGTATTTAG+AGG | + | chr3.2:66557951-66557970 | MS.gene29010:intron | 25.0% |
| ! | TTTGCTCTGACTTTAATTAT+TGG | + | chr3.2:66555540-66555559 | MS.gene29010:intron | 25.0% |
| !! | TAACCTAATCCTTATGTTTT+CGG | + | chr3.2:66555265-66555284 | MS.gene29010:intron | 25.0% |
| !! | TGAATCTTTAGTATTAGCTT+TGG | + | chr3.2:66557268-66557287 | MS.gene29010:intron | 25.0% |
| !!! | AACATCCCGTTTTATTTTTT+AGG | + | chr3.2:66558528-66558547 | MS.gene29010:intron | 25.0% |
| !!! | ACATCCCGTTTTATTTTTTA+GGG | + | chr3.2:66558529-66558548 | MS.gene29010:intron | 25.0% |
| !!! | ATAAGTTTTAGGTCCTTTTT+CGG | - | chr3.2:66556197-66556216 | None:intergenic | 25.0% |
| !!! | ATTTTTGGACAATTGATTTG+AGG | + | chr3.2:66559621-66559640 | MS.gene29010:CDS | 25.0% |
| !!! | CTAATCTTATTTGATTTTCC+AGG | - | chr3.2:66557902-66557921 | None:intergenic | 25.0% |
| !!! | TCCTATATTGTCATTTCTTT+TGG | - | chr3.2:66555604-66555623 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTTGGTCCTTAA+TGG | + | chr3.2:66558326-66558345 | MS.gene29010:intron | 25.0% |
| !!! | TTTTTGGACAATTGATTTGA+GGG | + | chr3.2:66559622-66559641 | MS.gene29010:CDS | 25.0% |
| AAATAGAGTGATCAACTACA+TGG | + | chr3.2:66558774-66558793 | MS.gene29010:intron | 30.0% | |
| AAATCAAAATGGAGGAAACT+CGG | + | chr3.2:66555698-66555717 | MS.gene29010:intron | 30.0% | |
| AAATGTTGGAAAACTGATTG+CGG | + | chr3.2:66556523-66556542 | MS.gene29010:CDS | 30.0% | |
| AACATAAGCTCTTATCATAG+AGG | - | chr3.2:66556150-66556169 | None:intergenic | 30.0% | |
| AACGAAGCTTTCATTTAACA+AGG | - | chr3.2:66556329-66556348 | None:intergenic | 30.0% | |
| AAGACATCAAACTTCTTGAA+AGG | + | chr3.2:66558132-66558151 | MS.gene29010:CDS | 30.0% | |
| AAGCTATAGTAGATAACCTA+TGG | - | chr3.2:66556047-66556066 | None:intergenic | 30.0% | |
| AAGCTGTTTATTCAAAAGCT+AGG | + | chr3.2:66555421-66555440 | MS.gene29010:intron | 30.0% | |
| AATAAAGGAAGAACTACCTA+TGG | + | chr3.2:66559598-66559617 | MS.gene29010:CDS | 30.0% | |
| ACTAGTCATGTTGTTGAATA+CGG | + | chr3.2:66555050-66555069 | MS.gene29010:CDS | 30.0% | |
| AGATGTCAGACTTAGTTTAT+TGG | + | chr3.2:66556661-66556680 | MS.gene29010:intron | 30.0% | |
| ATAATCCCATTCAAATCTAG+AGG | - | chr3.2:66556854-66556873 | None:intergenic | 30.0% | |
| ATATTTGGCAAGTTCTGTAT+TGG | + | chr3.2:66559707-66559726 | MS.gene29010:CDS | 30.0% | |
| ATCGTAGAAAATCAAAATGG+AGG | + | chr3.2:66555690-66555709 | MS.gene29010:intron | 30.0% | |
| ATGATATCATACCTGATTGA+CGG | - | chr3.2:66559250-66559269 | None:intergenic | 30.0% | |
| ATGGAAAATAGCAACATAAC+TGG | + | chr3.2:66559434-66559453 | MS.gene29010:intron | 30.0% | |
| ATTAAGAGGATACATACATG+TGG | - | chr3.2:66558029-66558048 | None:intergenic | 30.0% | |
| CAAAGGTTGAACATAATAGA+TGG | - | chr3.2:66558447-66558466 | None:intergenic | 30.0% | |
| CATAATAGATGGACATACAA+AGG | - | chr3.2:66558436-66558455 | None:intergenic | 30.0% | |
| CATGTATGTATCCTCTTAAT+AGG | + | chr3.2:66558029-66558048 | MS.gene29010:intron | 30.0% | |
| CCTATCGTAGAAAATCAAAA+TGG | + | chr3.2:66555687-66555706 | MS.gene29010:intron | 30.0% | |
| GATGACATTGTGGAAAAAAT+TGG | + | chr3.2:66557605-66557624 | MS.gene29010:CDS | 30.0% | |
| GTATGTGACGAAATATAATG+CGG | - | chr3.2:66554713-66554732 | None:intergenic | 30.0% | |
| TACACCCCTTAAATAAATTG+TGG | - | chr3.2:66557354-66557373 | None:intergenic | 30.0% | |
| TAGTAGATGTTTGTGTGTTT+GGG | + | chr3.2:66557376-66557395 | MS.gene29010:intron | 30.0% | |
| TAGTCCCTAAAAAATAAAGC+GGG | + | chr3.2:66558273-66558292 | MS.gene29010:intron | 30.0% | |
| TATTCAACAACATGACTAGT+AGG | - | chr3.2:66555050-66555069 | None:intergenic | 30.0% | |
| TATTTGTGAAAATGGGTAGA+TGG | + | chr3.2:66559415-66559434 | MS.gene29010:intron | 30.0% | |
| TCAATTGTCCAAAAATCCAT+AGG | - | chr3.2:66559617-66559636 | None:intergenic | 30.0% | |
| TCATTTAACAAGGTCTTCTT+TGG | - | chr3.2:66556319-66556338 | None:intergenic | 30.0% | |
| TCCATAGTTAGTAATCATCT+TGG | + | chr3.2:66557409-66557428 | MS.gene29010:intron | 30.0% | |
| TCTAGATTTGAATGGGATTA+TGG | + | chr3.2:66556853-66556872 | MS.gene29010:CDS | 30.0% | |
| TGAAAAAGCTGTTATCTTCT+TGG | + | chr3.2:66556728-66556747 | MS.gene29010:intron | 30.0% | |
| TGAACATAAATTGGCCATTA+AGG | - | chr3.2:66558343-66558362 | None:intergenic | 30.0% | |
| TTAAAGTAGCAAAACACTGA+TGG | - | chr3.2:66557996-66558015 | None:intergenic | 30.0% | |
| TTTAATCTTTCTGTAACGAC+AGG | + | chr3.2:66559005-66559024 | MS.gene29010:intron | 30.0% | |
| TTTACCAAAACATAGATTCG+TGG | - | chr3.2:66559363-66559382 | None:intergenic | 30.0% | |
| ! | AAGAACTACCTATGGATTTT+TGG | + | chr3.2:66559606-66559625 | MS.gene29010:CDS | 30.0% |
| ! | ATTGATTCTTCCCAATGAAA+AGG | - | chr3.2:66559318-66559337 | None:intergenic | 30.0% |
| !! | AGGTGCTGATTTAATTATCA+TGG | + | chr3.2:66558079-66558098 | MS.gene29010:CDS | 30.0% |
| !! | GATTTGTGTTTTGTTCTTTC+AGG | + | chr3.2:66556446-66556465 | MS.gene29010:intron | 30.0% |
| !! | TCATGAACAAGAGTACTAAA+TGG | - | chr3.2:66558196-66558215 | None:intergenic | 30.0% |
| !! | TGTCATTTCTTTTGGAAACT+CGG | - | chr3.2:66555596-66555615 | None:intergenic | 30.0% |
| !!! | CCATTTTGATTTTCTACGAT+AGG | - | chr3.2:66555690-66555709 | None:intergenic | 30.0% |
| !!! | TTTTTTGAAATGGAAACTCC+TGG | + | chr3.2:66557881-66557900 | MS.gene29010:intron | 30.0% |
| AAACATAGATTCGTGGTAAC+AGG | - | chr3.2:66559356-66559375 | None:intergenic | 35.0% | |
| AAGAAGAGTAAATCAGATGG+AGG | + | chr3.2:66555768-66555787 | MS.gene29010:intron | 35.0% | |
| AAGCCGAAAACATAAGGATT+AGG | - | chr3.2:66555271-66555290 | None:intergenic | 35.0% | |
| AAGGATTACAAGACTTAGAG+AGG | + | chr3.2:66559169-66559188 | MS.gene29010:CDS | 35.0% | |
| AATCTATCTTGTTGACCACA+AGG | - | chr3.2:66559059-66559078 | None:intergenic | 35.0% | |
| ACAAGATGTTGAGAATGCAT+TGG | + | chr3.2:66556895-66556914 | MS.gene29010:CDS | 35.0% | |
| ACATTTACGTGCGTATTAAG+TGG | + | chr3.2:66556372-66556391 | MS.gene29010:intron | 35.0% | |
| AGAAGACCTGTAGATTCTAT+AGG | + | chr3.2:66555745-66555764 | MS.gene29010:intron | 35.0% | |
| AGAAGAGTAAATCAGATGGA+GGG | + | chr3.2:66555769-66555788 | MS.gene29010:intron | 35.0% | |
| AGGAAGAAGAGTAAATCAGA+TGG | + | chr3.2:66555765-66555784 | MS.gene29010:intron | 35.0% | |
| AGGATTACAAGACTTAGAGA+GGG | + | chr3.2:66559170-66559189 | MS.gene29010:CDS | 35.0% | |
| AGTCCCTAAAAAATAAAGCG+GGG | + | chr3.2:66558274-66558293 | MS.gene29010:intron | 35.0% | |
| CAAAACGAAAAAGTTATGCG+AGG | - | chr3.2:66558311-66558330 | None:intergenic | 35.0% | |
| CAAAGGTTGAACAAAGTAGA+TGG | - | chr3.2:66558419-66558438 | None:intergenic | 35.0% | |
| CAATCTGGATTACAGGTATA+TGG | + | chr3.2:66556944-66556963 | MS.gene29010:intron | 35.0% | |
| CCTGGATGCAAAAACTATAA+GGG | + | chr3.2:66555802-66555821 | MS.gene29010:intron | 35.0% | |
| CTAGTAGATGTTTGTGTGTT+TGG | + | chr3.2:66557375-66557394 | MS.gene29010:intron | 35.0% | |
| CTTCTTCCTATAGAATCTAC+AGG | - | chr3.2:66555754-66555773 | None:intergenic | 35.0% | |
| GAAGCAAGTGTCAACATTAA+CGG | + | chr3.2:66557539-66557558 | MS.gene29010:CDS | 35.0% | |
| GCAATAGTTACTGAAATTGC+TGG | + | chr3.2:66557497-66557516 | MS.gene29010:CDS | 35.0% | |
| GCCAAGATGATTACTAACTA+TGG | - | chr3.2:66557413-66557432 | None:intergenic | 35.0% | |
| GTGCTAACAATTCATGTGTT+AGG | + | chr3.2:66555501-66555520 | MS.gene29010:intron | 35.0% | |
| TAATTGTGGCAAAACCTTAG+CGG | - | chr3.2:66558165-66558184 | None:intergenic | 35.0% | |
| TACAGTACAGATTACAGAGA+AGG | - | chr3.2:66557640-66557659 | None:intergenic | 35.0% | |
| TACATACATGTGGAGCAATA+TGG | - | chr3.2:66558019-66558038 | None:intergenic | 35.0% | |
| TCTCAACATCTTGTGACATA+TGG | - | chr3.2:66556889-66556908 | None:intergenic | 35.0% | |
| TGTCAAACAGATCAACACTT+GGG | - | chr3.2:66559508-66559527 | None:intergenic | 35.0% | |
| TGTTGAGAATGCATTGGAAA+CGG | + | chr3.2:66556901-66556920 | MS.gene29010:CDS | 35.0% | |
| TTACTCTTGTAGTGACGAAA+GGG | - | chr3.2:66558741-66558760 | None:intergenic | 35.0% | |
| TTCATTGGGAAGAATCAATC+AGG | + | chr3.2:66559319-66559338 | MS.gene29010:intron | 35.0% | |
| TTCTTGCAGATAGCAATTGT+TGG | + | chr3.2:66557142-66557161 | MS.gene29010:intron | 35.0% | |
| TTGGTTTCATCTATGAGTGT+TGG | + | chr3.2:66556680-66556699 | MS.gene29010:intron | 35.0% | |
| TTGTTGAACTTCAGTGTCAT+GGG | + | chr3.2:66555159-66555178 | MS.gene29010:CDS | 35.0% | |
| TTTACTCTTGTAGTGACGAA+AGG | - | chr3.2:66558742-66558761 | None:intergenic | 35.0% | |
| ! | ACTCTTCGTGCTTTTCTAAA+TGG | + | chr3.2:66556476-66556495 | MS.gene29010:CDS | 35.0% |
| ! | AGACCCACATAGAATTGTTT+TGG | - | chr3.2:66557060-66557079 | None:intergenic | 35.0% |
| ! | CCTTATAGTTTTTGCATCCA+GGG | - | chr3.2:66555804-66555823 | None:intergenic | 35.0% |
| ! | CTTAGGATTTGTTTAGAAGC+TGG | + | chr3.2:66555206-66555225 | MS.gene29010:CDS | 35.0% |
| ! | GAATGGAGTAGATTGCTATT+TGG | + | chr3.2:66556422-66556441 | MS.gene29010:intron | 35.0% |
| ! | GACAATGTGAACAACTTGTT+CGG | + | chr3.2:66559543-66559562 | MS.gene29010:CDS | 35.0% |
| ! | GTGCTTTTCTTAAGGTCTTT+AGG | + | chr3.2:66555464-66555483 | MS.gene29010:intron | 35.0% |
| ! | GTTACCACGAATCTATGTTT+TGG | + | chr3.2:66559356-66559375 | MS.gene29010:intron | 35.0% |
| ! | TAAGTCTTGTAATCCTTGAC+TGG | - | chr3.2:66559166-66559185 | None:intergenic | 35.0% |
| ! | TGTTGTTGATGAGGTAATAG+CGG | + | chr3.2:66555097-66555116 | MS.gene29010:CDS | 35.0% |
| !! | AAGCAGTATTTAGAGGTATC+TGG | + | chr3.2:66557958-66557977 | MS.gene29010:intron | 35.0% |
| !!! | ATCCCCCGCTTTATTTTTTA+GGG | - | chr3.2:66558280-66558299 | None:intergenic | 35.0% |
| AAAATTGAGCTAGACATGCC+TGG | - | chr3.2:66556589-66556608 | None:intergenic | 40.0% | |
| AAGCTGTTATCTTCTTGGAC+AGG | + | chr3.2:66556733-66556752 | MS.gene29010:intron | 40.0% | |
| ACACATGAATTGTTAGCACC+TGG | - | chr3.2:66555500-66555519 | None:intergenic | 40.0% | |
| ACGACAACATTAGAGAGAGT+TGG | + | chr3.2:66555657-66555676 | MS.gene29010:intron | 40.0% | |
| AGCTGTTATCTTCTTGGACA+GGG | + | chr3.2:66556734-66556753 | MS.gene29010:intron | 40.0% | |
| AGTCAAGCCTTCTTAATGCA+TGG | + | chr3.2:66557182-66557201 | MS.gene29010:CDS | 40.0% | |
| AGTCTTAGAGATTGTGGGTA+TGG | + | chr3.2:66559194-66559213 | MS.gene29010:CDS | 40.0% | |
| ATAACCCTTCTTGATACTGC+AGG | + | chr3.2:66557569-66557588 | MS.gene29010:CDS | 40.0% | |
| ATCCCATTCAAATCTAGAGG+TGG | - | chr3.2:66556851-66556870 | None:intergenic | 40.0% | |
| ATCGCTCTACACCTATTAAG+AGG | - | chr3.2:66558043-66558062 | None:intergenic | 40.0% | |
| ATGCCACCTCTAGATTTGAA+TGG | + | chr3.2:66556845-66556864 | MS.gene29010:CDS | 40.0% | |
| ATGTTTGTGTGTTTGGGCAA+AGG | + | chr3.2:66557382-66557401 | MS.gene29010:intron | 40.0% | |
| ATTGAACTAGAAGAGTGGAG+TGG | + | chr3.2:66558705-66558724 | MS.gene29010:intron | 40.0% | |
| ATTTGTCATACAGTGCCCTT+AGG | + | chr3.2:66557003-66557022 | MS.gene29010:intron | 40.0% | |
| CAGTATCAAGAAGGGTTATG+GGG | - | chr3.2:66557568-66557587 | None:intergenic | 40.0% | |
| CCCTGGATGCAAAAACTATA+AGG | + | chr3.2:66555801-66555820 | MS.gene29010:intron | 40.0% | |
| CGACAACATTAGAGAGAGTT+GGG | + | chr3.2:66555658-66555677 | MS.gene29010:intron | 40.0% | |
| CGATGGAAATGTTGTTGATG+AGG | + | chr3.2:66555088-66555107 | MS.gene29010:CDS | 40.0% | |
| CTACACCTCTTACAACCTAA+GGG | - | chr3.2:66557021-66557040 | None:intergenic | 40.0% | |
| CTTTGCTCCATGCATTAAGA+AGG | - | chr3.2:66557192-66557211 | None:intergenic | 40.0% | |
| GACAACATTAGAGAGAGTTG+GGG | + | chr3.2:66555659-66555678 | MS.gene29010:intron | 40.0% | |
| GAGTAAACGTTCGTCTTTGT+TGG | - | chr3.2:66554850-66554869 | None:intergenic | 40.0% | |
| GCAGTATCAAGAAGGGTTAT+GGG | - | chr3.2:66557569-66557588 | None:intergenic | 40.0% | |
| GCTAGGATTAGAAATGACCT+CGG | + | chr3.2:66555438-66555457 | MS.gene29010:intron | 40.0% | |
| GTCAAACAGATCAACACTTG+GGG | - | chr3.2:66559507-66559526 | None:intergenic | 40.0% | |
| GTCCCTAAAAAATAAAGCGG+GGG | + | chr3.2:66558275-66558294 | MS.gene29010:intron | 40.0% | |
| GTGTAACTCTAGCATCTAAG+TGG | - | chr3.2:66558828-66558847 | None:intergenic | 40.0% | |
| GTGTCAAACAGATCAACACT+TGG | - | chr3.2:66559509-66559528 | None:intergenic | 40.0% | |
| GTTGTTGAACTTCAGTGTCA+TGG | + | chr3.2:66555158-66555177 | MS.gene29010:CDS | 40.0% | |
| TAATCTCACAAGTGCTTCCT+TGG | - | chr3.2:66559570-66559589 | None:intergenic | 40.0% | |
| TAATCTGTACTGTATGCTGC+AGG | + | chr3.2:66557646-66557665 | MS.gene29010:intron | 40.0% | |
| TACTCTTGTAGTGACGAAAG+GGG | - | chr3.2:66558740-66558759 | None:intergenic | 40.0% | |
| TATGACAAGCTTCTGCAATC+TGG | + | chr3.2:66556929-66556948 | MS.gene29010:CDS | 40.0% | |
| TATGGAAAGAGACATTCGAG+AGG | + | chr3.2:66558645-66558664 | MS.gene29010:intron | 40.0% | |
| TCTACACCTCTTACAACCTA+AGG | - | chr3.2:66557022-66557041 | None:intergenic | 40.0% | |
| TGAAAGGATTCAATCCGCTA+AGG | + | chr3.2:66558148-66558167 | MS.gene29010:CDS | 40.0% | |
| TGCAGTATCAAGAAGGGTTA+TGG | - | chr3.2:66557570-66557589 | None:intergenic | 40.0% | |
| TGCCACCTCTAGATTTGAAT+GGG | + | chr3.2:66556846-66556865 | MS.gene29010:CDS | 40.0% | |
| TGTTGAGTTTGCAACAACGT+CGG | - | chr3.2:66554901-66554920 | None:intergenic | 40.0% | |
| TGTTTGTGTGTTTGGGCAAA+GGG | + | chr3.2:66557383-66557402 | MS.gene29010:intron | 40.0% | |
| TTAGAGATTGTGGGTATGGA+TGG | + | chr3.2:66559198-66559217 | MS.gene29010:CDS | 40.0% | |
| TTGTTGACCACAAGGATTAC+CGG | - | chr3.2:66559051-66559070 | None:intergenic | 40.0% | |
| ! | CCCTTATAGTTTTTGCATCC+AGG | - | chr3.2:66555805-66555824 | None:intergenic | 40.0% |
| ! | GCATCTAAGTGGCATTTTTG+AGG | - | chr3.2:66558817-66558836 | None:intergenic | 40.0% |
| ! | TGCTTTTCTAAATGGTCGTC+TGG | + | chr3.2:66556484-66556503 | MS.gene29010:CDS | 40.0% |
| ! | TGTCACTTGGACAGATAAGT+GGG | + | chr3.2:66559654-66559673 | MS.gene29010:CDS | 40.0% |
| ! | TTGTCACTTGGACAGATAAG+TGG | + | chr3.2:66559653-66559672 | MS.gene29010:CDS | 40.0% |
| !! | TAGTTGGTGGAGTGAAGAAA+CGG | - | chr3.2:66554755-66554774 | None:intergenic | 40.0% |
| !! | TCTTTTGGAAACTCGGTATC+TGG | - | chr3.2:66555589-66555608 | None:intergenic | 40.0% |
| !! | TTGACTTGCCAACATTAGGA+CGG | - | chr3.2:66557168-66557187 | None:intergenic | 40.0% |
| !!! | CATCCCCCGCTTTATTTTTT+AGG | - | chr3.2:66558281-66558300 | None:intergenic | 40.0% |
| !!! | GAAGAAACGGTTGTTGGTTT+TGG | - | chr3.2:66554742-66554761 | None:intergenic | 40.0% |
| !!! | GTTTTTGGTGCTTATGCTAC+AGG | - | chr3.2:66558872-66558891 | None:intergenic | 40.0% |
| !!! | TGTTGAATACGGTGTCGTTT+TGG | + | chr3.2:66555061-66555080 | MS.gene29010:CDS | 40.0% |
| AAGTGGGGAAGATATATCCG+AGG | + | chr3.2:66559670-66559689 | MS.gene29010:CDS | 45.0% | |
| AATTATTGGGCCCCCATTAG+TGG | + | chr3.2:66555554-66555573 | MS.gene29010:intron | 45.0% | |
| ACATGTGCTGTAACCAGTCA+AGG | + | chr3.2:66559150-66559169 | MS.gene29010:CDS | 45.0% | |
| ACCGCCTAAGGATGTTACAA+TGG | - | chr3.2:66554934-66554953 | None:intergenic | 45.0% | |
| ACTCTTGTAGTGACGAAAGG+GGG | - | chr3.2:66558739-66558758 | None:intergenic | 45.0% | |
| AGGGCAGTCTTAGAGATTGT+GGG | + | chr3.2:66559189-66559208 | MS.gene29010:CDS | 45.0% | |
| ATCAACACTTGGGGCATGTT+TGG | - | chr3.2:66559498-66559517 | None:intergenic | 45.0% | |
| ATCAACTGGATCTTCAACCC+CGG | + | chr3.2:66559029-66559048 | MS.gene29010:CDS | 45.0% | |
| ATTGTTGGCCGTCCTAATGT+TGG | + | chr3.2:66557157-66557176 | MS.gene29010:CDS | 45.0% | |
| CATGAATTGTTAGCACCTGG+AGG | - | chr3.2:66555497-66555516 | None:intergenic | 45.0% | |
| CTAGTTCAATGCTGCCTACT+AGG | - | chr3.2:66558695-66558714 | None:intergenic | 45.0% | |
| CTCTCTCAGGCTGAAAATGT+TGG | + | chr3.2:66556509-66556528 | MS.gene29010:CDS | 45.0% | |
| CTGTAACGACAGGAATCAAC+TGG | + | chr3.2:66559015-66559034 | MS.gene29010:intron | 45.0% | |
| GATGCCTGCAGTATCAAGAA+GGG | - | chr3.2:66557576-66557595 | None:intergenic | 45.0% | |
| GCAGCCATTGTAACATCCTT+AGG | + | chr3.2:66554927-66554946 | MS.gene29010:CDS | 45.0% | |
| GCCATTGTAACATCCTTAGG+CGG | + | chr3.2:66554930-66554949 | MS.gene29010:CDS | 45.0% | |
| GCTTCTGCAATCTGGATTAC+AGG | + | chr3.2:66556937-66556956 | MS.gene29010:CDS | 45.0% | |
| GGAAGAATCAATCAGGCAGT+GGG | + | chr3.2:66559326-66559345 | MS.gene29010:intron | 45.0% | |
| GTCACTTGGACAGATAAGTG+GGG | + | chr3.2:66559655-66559674 | MS.gene29010:CDS | 45.0% | |
| TCGAGAGGAATGTTAGCATC+AGG | + | chr3.2:66558660-66558679 | MS.gene29010:intron | 45.0% | |
| TCTTCACGAGTATACGACCT+CGG | - | chr3.2:66555137-66555156 | None:intergenic | 45.0% | |
| TCTTGATACTGCAGGCATCA+GGG | + | chr3.2:66557577-66557596 | MS.gene29010:CDS | 45.0% | |
| TGATGCCTGCAGTATCAAGA+AGG | - | chr3.2:66557577-66557596 | None:intergenic | 45.0% | |
| TGGAGTGAAGAAACGGTTGT+TGG | - | chr3.2:66554748-66554767 | None:intergenic | 45.0% | |
| TGGTCCAATCGTCCACTAAT+GGG | - | chr3.2:66555569-66555588 | None:intergenic | 45.0% | |
| TGTTATCTTCTTGGACAGGG+TGG | + | chr3.2:66556737-66556756 | MS.gene29010:intron | 45.0% | |
| TGTTGACCACAAGGATTACC+GGG | - | chr3.2:66559050-66559069 | None:intergenic | 45.0% | |
| TTCTTGATACTGCAGGCATC+AGG | + | chr3.2:66557576-66557595 | MS.gene29010:CDS | 45.0% | |
| ! | CAAAACACTGATGGACATGC+AGG | - | chr3.2:66557987-66558006 | None:intergenic | 45.0% |
| ! | CTCGGAGTGTGCTTTTCTTA+AGG | + | chr3.2:66555456-66555475 | MS.gene29010:intron | 45.0% |
| ! | CTTAAGAAAAGCACACTCCG+AGG | - | chr3.2:66555458-66555477 | None:intergenic | 45.0% |
| ! | GCAGCATTGAACTAGAAGAG+TGG | + | chr3.2:66558700-66558719 | MS.gene29010:intron | 45.0% |
| ! | TCTTTAGGTTCGAATCCTCC+AGG | + | chr3.2:66555479-66555498 | MS.gene29010:intron | 45.0% |
| ! | TGAACAACTTGTTCGGACCA+AGG | + | chr3.2:66559550-66559569 | MS.gene29010:CDS | 45.0% |
| !! | AGGCTTGACTTGCCAACATT+AGG | - | chr3.2:66557172-66557191 | None:intergenic | 45.0% |
| !!! | GGTGTCGTTTTGGATTTCGA+TGG | + | chr3.2:66555071-66555090 | MS.gene29010:CDS | 45.0% |
| ACACTTGGGGCATGTTTGGT+TGG | - | chr3.2:66559494-66559513 | None:intergenic | 50.0% | |
| ACTGATTGCGGCCAAATCTG+TGG | + | chr3.2:66556535-66556554 | MS.gene29010:CDS | 50.0% | |
| AGGGATGCTGCATTGTCACT+TGG | + | chr3.2:66559641-66559660 | MS.gene29010:CDS | 50.0% | |
| ATCAGCAGCAGCCACAGATT+TGG | - | chr3.2:66556549-66556568 | None:intergenic | 50.0% | |
| ATGGAGGGTAGTCAAATCCC+TGG | + | chr3.2:66555784-66555803 | MS.gene29010:intron | 50.0% | |
| CAGGGACACTGATGACATTG+TGG | + | chr3.2:66557595-66557614 | MS.gene29010:CDS | 50.0% | |
| CCACTTCGTGGGATAAGACT+TGG | + | chr3.2:66555924-66555943 | MS.gene29010:intron | 50.0% | |
| CGAAAGACGAACGATTCCGA+CGG | - | chr3.2:66554967-66554986 | None:intergenic | 50.0% | |
| CGTCGGAATCGTTCGTCTTT+CGG | + | chr3.2:66554965-66554984 | MS.gene29010:CDS | 50.0% | |
| CTAGAAGAGTGGAGTGGACA+TGG | + | chr3.2:66558711-66558730 | MS.gene29010:intron | 50.0% | |
| CTGGTCCAATCGTCCACTAA+TGG | - | chr3.2:66555570-66555589 | None:intergenic | 50.0% | |
| GAGGGCAGTCTTAGAGATTG+TGG | + | chr3.2:66559188-66559207 | MS.gene29010:CDS | 50.0% | |
| GCAGAGACTGAATGGGACAA+AGG | + | chr3.2:66559090-66559109 | MS.gene29010:CDS | 50.0% | |
| GCCTTGTGCAGAGACTGAAT+GGG | + | chr3.2:66559083-66559102 | MS.gene29010:CDS | 50.0% | |
| GCGGAAAGAAGACATAGCCA+TGG | - | chr3.2:66554694-66554713 | None:intergenic | 50.0% | |
| GGGAAGAATCAATCAGGCAG+TGG | + | chr3.2:66559325-66559344 | MS.gene29010:intron | 50.0% | |
| GGTCCAATCGTCCACTAATG+GGG | - | chr3.2:66555568-66555587 | None:intergenic | 50.0% | |
| GTATGGATGGCATTGCTGCT+GGG | + | chr3.2:66559211-66559230 | MS.gene29010:CDS | 50.0% | |
| GTCCAATCGTCCACTAATGG+GGG | - | chr3.2:66555567-66555586 | None:intergenic | 50.0% | |
| GTCGGAATCGTTCGTCTTTC+GGG | + | chr3.2:66554966-66554985 | MS.gene29010:CDS | 50.0% | |
| GTTGACCACAAGGATTACCG+GGG | - | chr3.2:66559049-66559068 | None:intergenic | 50.0% | |
| TATGGATGGCATTGCTGCTG+GGG | + | chr3.2:66559212-66559231 | MS.gene29010:CDS | 50.0% | |
| TCCCATTCAGTCTCTGCACA+AGG | - | chr3.2:66559087-66559106 | None:intergenic | 50.0% | |
| TGGGGAAGATATATCCGAGG+AGG | + | chr3.2:66559673-66559692 | MS.gene29010:CDS | 50.0% | |
| TGTGTTTGCGTCGTGTGCTT+AGG | + | chr3.2:66555189-66555208 | MS.gene29010:CDS | 50.0% | |
| TTCAACCCCGGTAATCCTTG+TGG | + | chr3.2:66559041-66559060 | MS.gene29010:CDS | 50.0% | |
| ! | AGCCTTGTGCAGAGACTGAA+TGG | + | chr3.2:66559082-66559101 | MS.gene29010:CDS | 50.0% |
| ! | ATGGCTGTGAGTGCTGTTGA+AGG | + | chr3.2:66558098-66558117 | MS.gene29010:CDS | 50.0% |
| ! | ATGTAGCTGACTCCACTTCG+TGG | + | chr3.2:66555912-66555931 | MS.gene29010:intron | 50.0% |
| ! | CAGTGCCCTTAGGTTGTAAG+AGG | + | chr3.2:66557013-66557032 | MS.gene29010:intron | 50.0% |
| ! | CCAAGTCTTATCCCACGAAG+TGG | - | chr3.2:66555927-66555946 | None:intergenic | 50.0% |
| ! | TGGCTGTGAGTGCTGTTGAA+GGG | + | chr3.2:66558099-66558118 | MS.gene29010:CDS | 50.0% |
| ! | TGTAGCTGACTCCACTTCGT+GGG | + | chr3.2:66555913-66555932 | MS.gene29010:intron | 50.0% |
| !! | TACGACCTCGGTGCTAACAT+CGG | - | chr3.2:66555125-66555144 | None:intergenic | 50.0% |
| AAGAAGAGAGTGACGCCACG+TGG | - | chr3.2:66554781-66554800 | None:intergenic | 55.0% | |
| AAGACGAACGATTCCGACGG+CGG | - | chr3.2:66554964-66554983 | None:intergenic | 55.0% | |
| ATGGATGGCATTGCTGCTGG+GGG | + | chr3.2:66559213-66559232 | MS.gene29010:CDS | 55.0% | |
| GGAGCAACACTTGCTCAACC+AGG | + | chr3.2:66555227-66555246 | MS.gene29010:CDS | 55.0% | |
| GGTATGGATGGCATTGCTGC+TGG | + | chr3.2:66559210-66559229 | MS.gene29010:CDS | 55.0% | |
| TCGCAGATGGACCGTCAATC+AGG | + | chr3.2:66559236-66559255 | MS.gene29010:CDS | 55.0% | |
| TGGTCGTCTGGATCTCTCTC+AGG | + | chr3.2:66556496-66556515 | MS.gene29010:CDS | 55.0% | |
| ! | CGATCTGAAGCTGCTGCTAG+AGG | + | chr3.2:66558059-66558078 | MS.gene29010:CDS | 55.0% |
| ! | CTGTGAGTGCTGTTGAAGGG+TGG | + | chr3.2:66558102-66558121 | MS.gene29010:CDS | 55.0% |
| ! | TGCAGCACTGGAAGGAATCC+AGG | + | chr3.2:66556568-66556587 | MS.gene29010:CDS | 55.0% |
| AAGAGAGTGACGCCACGTGG+CGG | - | chr3.2:66554778-66554797 | None:intergenic | 60.0% | |
| AGGCCGCCACATGTTTCTCG+CGG | - | chr3.2:66555030-66555049 | None:intergenic | 60.0% | |
| GACCCGCGAGAAACATGTGG+CGG | + | chr3.2:66555024-66555043 | MS.gene29010:CDS | 60.0% | |
| GCCACATGTTTCTCGCGGGT+CGG | - | chr3.2:66555025-66555044 | None:intergenic | 60.0% | |
| TCCGACCCGCGAGAAACATG+TGG | + | chr3.2:66555021-66555040 | MS.gene29010:CDS | 60.0% | |
| ! | GCTGCTGATGCAGCACTGGA+AGG | + | chr3.2:66556560-66556579 | MS.gene29010:CDS | 60.0% |
| ! | GGCCCCCATTAGTGGACGAT+TGG | + | chr3.2:66555562-66555581 | MS.gene29010:intron | 60.0% |
| AACGATTCCGACGGCGGCAG+GGG | - | chr3.2:66554958-66554977 | None:intergenic | 65.0% | |
| CTCCACCAACTACCGCCACG+TGG | + | chr3.2:66554763-66554782 | MS.gene29010:CDS | 65.0% | |
| GAACGATTCCGACGGCGGCA+GGG | - | chr3.2:66554959-66554978 | None:intergenic | 65.0% | |
| GGCCGCCACATGTTTCTCGC+GGG | - | chr3.2:66555029-66555048 | None:intergenic | 65.0% | |
| GGCTGCTGCTGATGCAGCAC+TGG | + | chr3.2:66556556-66556575 | MS.gene29010:CDS | 65.0% | |
| TCCGCACGCGGTGTCTATCG+CGG | + | chr3.2:66554989-66555008 | MS.gene29010:CDS | 65.0% | |
| TGACGCCACGTGGCGGTAGT+TGG | - | chr3.2:66554771-66554790 | None:intergenic | 65.0% | |
| TTGCTGCTGGGGGTCGCAGA+TGG | + | chr3.2:66559223-66559242 | MS.gene29010:CDS | 65.0% | |
| ! | TCGTCTTTCGGGTCCGCACG+CGG | + | chr3.2:66554977-66554996 | MS.gene29010:CDS | 65.0% |
| !! | CGGTGCCGATGTTAGCACCG+AGG | + | chr3.2:66555117-66555136 | MS.gene29010:CDS | 65.0% |
| ACGATTCCGACGGCGGCAGG+GGG | - | chr3.2:66554957-66554976 | None:intergenic | 70.0% | |
| CCCGCGATAGACACCGCGTG+CGG | - | chr3.2:66554993-66555012 | None:intergenic | 70.0% | |
| CCGCACGCGGTGTCTATCGC+GGG | + | chr3.2:66554990-66555009 | MS.gene29010:CDS | 70.0% | |
| CGAACGATTCCGACGGCGGC+AGG | - | chr3.2:66554960-66554979 | None:intergenic | 70.0% | |
| CGCCACGTGGCGGTAGTTGG+TGG | - | chr3.2:66554768-66554787 | None:intergenic | 70.0% | |
| ! | GGCGGCAGGGGGACCGCCTA+AGG | - | chr3.2:66554946-66554965 | None:intergenic | 80.0% |
| ! | GGCGGTCCCCCTGCCGCCGT+CGG | + | chr3.2:66554948-66554967 | MS.gene29010:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 66554687 | 66559736 | 66554687 | ID=MS.gene29010 |
| chr3.2 | mRNA | 66554687 | 66559736 | 66554687 | ID=MS.gene29010.t1;Parent=MS.gene29010 |
| chr3.2 | exon | 66554687 | 66555248 | 66554687 | ID=MS.gene29010.t1.exon1;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66554687 | 66555248 | 66554687 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66556468 | 66556589 | 66556468 | ID=MS.gene29010.t1.exon2;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66556468 | 66556589 | 66556468 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66556755 | 66556958 | 66556755 | ID=MS.gene29010.t1.exon3;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66556755 | 66556958 | 66556755 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66557151 | 66557210 | 66557151 | ID=MS.gene29010.t1.exon4;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66557151 | 66557210 | 66557151 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66557488 | 66557626 | 66557488 | ID=MS.gene29010.t1.exon5;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66557488 | 66557626 | 66557488 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66558051 | 66558169 | 66558051 | ID=MS.gene29010.t1.exon6;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66558051 | 66558169 | 66558051 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66559027 | 66559257 | 66559027 | ID=MS.gene29010.t1.exon7;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66559027 | 66559257 | 66559027 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| chr3.2 | exon | 66559542 | 66559736 | 66559542 | ID=MS.gene29010.t1.exon8;Parent=MS.gene29010.t1 |
| chr3.2 | CDS | 66559542 | 66559736 | 66559542 | ID=cds.MS.gene29010.t1;Parent=MS.gene29010.t1 |
| Gene Sequence |
| Protein sequence |
