AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050507


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050507.t1 MTR_7g114660 96.727 275 5 2 1 271 116 390 0.0 524
MS.gene050507.t1 MTR_8g465010 87.611 226 27 1 46 271 161 385 1.87e-133 382
MS.gene050507.t1 MTR_8g031500 53.257 261 56 9 18 271 144 345 1.35e-66 211
MS.gene050507.t1 MTR_3g063950 46.964 247 94 4 52 268 80 319 9.54e-62 197
MS.gene050507.t1 MTR_3g063940 46.311 244 95 5 52 265 84 321 5.61e-59 191
MS.gene050507.t1 MTR_3g063940 42.857 168 89 3 52 218 84 245 1.03e-34 126
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050507.t1 AT1G54520 74.409 254 60 3 22 271 139 391 8.27e-129 371

Find 78 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTACTCTGCACCGTATTA+TGG 0.167452 7.2:-2829520 MS.gene050507:CDS
TTCTTGTAGGTTGGTTTGTT+GGG 0.272525 7.2:-2827396 MS.gene050507:intron
TTTACTTTGGACCTGCTGTT+GGG 0.289346 7.2:-2829474 MS.gene050507:CDS
CTTACTCTGCACCGTATTAT+GGG 0.301234 7.2:-2829519 MS.gene050507:CDS
TGCAGGCAGTTGAGGTGTTA+TGG 0.316865 7.2:-2824426 MS.gene050507:intron
CACTTCAAAGGGATCTCAAT+AGG 0.346195 7.2:-2827362 MS.gene050507:CDS
ATTAGCTTTGCTTCGGCATC+CGG 0.346237 7.2:-2826887 MS.gene050507:CDS
GTAGGTTGGTTTGTTGGGGA+TGG 0.358522 7.2:-2827391 MS.gene050507:intron
GTTGGGGTTGGAGTTGGTGC+TGG 0.371881 7.2:-2829457 MS.gene050507:CDS
GTTCTTGTAGGTTGGTTTGT+TGG 0.376176 7.2:-2827397 MS.gene050507:intron
TCAGTTCCATCACCGAGTCC+TGG 0.378951 7.2:-2829547 MS.gene050507:CDS
CCTGCTGTTGGGGTTGGAGT+TGG 0.379807 7.2:-2829463 MS.gene050507:CDS
TATATATCAGATAACAATCT+TGG 0.384768 7.2:-2824628 MS.gene050507:intron
TGCTAAGATGAGAAATAAAC+TGG 0.388702 7.2:+2829432 None:intergenic
ACGAGAAGCCAGAGATCTAA+TGG 0.389758 7.2:-2826211 MS.gene050507:CDS
TTTGTAGGTGGACATAAAAC+GGG 0.392756 7.2:-2826338 MS.gene050507:intron
GTTTACTTTGGACCTGCTGT+TGG 0.396536 7.2:-2829475 MS.gene050507:CDS
GGCCTTCTCCGTTTAGCGGC+GGG 0.403324 7.2:-2829498 MS.gene050507:CDS
TGCTGAACCCATTAGATCTC+TGG 0.409729 7.2:+2826203 None:intergenic
AATATGTAACTCAAACCTTC+TGG 0.411911 7.2:+2827312 None:intergenic
TAGGTTGGTTTGTTGGGGAT+GGG 0.422903 7.2:-2827390 MS.gene050507:CDS
AACCACCGTACTCAAGCTTC+AGG 0.427212 7.2:-2829332 MS.gene050507:intron
GGTAGTGTTCTTACTGCTGC+TGG 0.430179 7.2:-2829358 MS.gene050507:CDS
TTTGGACCTGCTGTTGGGGT+TGG 0.434596 7.2:-2829469 MS.gene050507:CDS
AGTTTATTTCTCATCTTAGC+AGG 0.437254 7.2:-2829430 MS.gene050507:CDS
TAATAATTTGCTCGAAGGAA+TGG 0.440166 7.2:+2824527 None:intergenic
AAGTAAACCCCGCCGCTAAA+CGG 0.443423 7.2:+2829490 None:intergenic
CGTCTTCATCTTCGTCGTCT+AGG 0.449860 7.2:-2829576 MS.gene050507:CDS
CATCCGGATTACTGTATCTC+GGG 0.450640 7.2:-2826871 MS.gene050507:CDS
AGGAAGTTTATGTTCTCCTT+CGG 0.456217 7.2:+2824599 None:intergenic
TTTAGCGGCGGGGTTTACTT+TGG 0.458274 7.2:-2829487 MS.gene050507:CDS
CATAAACTTCCTAGCATCAA+TGG 0.460567 7.2:-2824588 MS.gene050507:CDS
AAATGATACTCTCTCGGAAC+GGG 0.469991 7.2:-2824389 MS.gene050507:CDS
CAATGGAAGTGGAAACTTGA+AGG 0.473142 7.2:-2824571 MS.gene050507:CDS
AGACGTCATTAGCTTTGCTT+CGG 0.474800 7.2:-2826894 MS.gene050507:CDS
GGATGGGTCGTTCACTTCAA+AGG 0.475754 7.2:-2827374 MS.gene050507:CDS
CTTCCTAGCATCAATGGAAG+TGG 0.493075 7.2:-2824582 MS.gene050507:CDS
CAGTTCCATCACCGAGTCCT+GGG 0.494367 7.2:-2829546 MS.gene050507:CDS
TTACTTTGGACCTGCTGTTG+GGG 0.494918 7.2:-2829473 MS.gene050507:CDS
ATTTACAAAGGCCGCAAAAG+TGG 0.500444 7.2:+2824349 None:intergenic
GGTTTGAGTTACATATTGAC+AGG 0.505076 7.2:-2827306 MS.gene050507:intron
AACGGAGAAGGCCCATAATA+CGG 0.518903 7.2:+2829508 None:intergenic
TAATTACTTGCAGGCAGTTG+AGG 0.519740 7.2:-2824434 MS.gene050507:intron
CGAGAAGCCAGAGATCTAAT+GGG 0.521062 7.2:-2826210 MS.gene050507:CDS
GCATCCGGATTACTGTATCT+CGG 0.526629 7.2:-2826872 MS.gene050507:CDS
TATGGGCCTTCTCCGTTTAG+CGG 0.528018 7.2:-2829502 MS.gene050507:CDS
GAGTAAGAAAACCCAGGACT+CGG 0.528838 7.2:+2829535 None:intergenic
TCTTGTAGGTTGGTTTGTTG+GGG 0.534202 7.2:-2827395 MS.gene050507:intron
TTTCCACTTCCATTGATGCT+AGG 0.543766 7.2:+2824579 None:intergenic
CCAACTCCAACCCCAACAGC+AGG 0.545304 7.2:+2829463 None:intergenic
GCCTTCTCCGTTTAGCGGCG+GGG 0.547880 7.2:-2829497 MS.gene050507:CDS
AAATGAAAATGATACTCTCT+CGG 0.552119 7.2:-2824395 MS.gene050507:CDS
TCAACGTTAACAACATAAAG+AGG 0.553658 7.2:-2826240 MS.gene050507:CDS
ATAAAACGGGGTATAGAAGA+AGG 0.555616 7.2:-2826325 MS.gene050507:CDS
TTTCTTTCTGATCGTGATGA+GGG 0.556740 7.2:-2829379 MS.gene050507:CDS
TACCCCGAGATACAGTAATC+CGG 0.558063 7.2:+2826868 None:intergenic
ACCCCGCCGCTAAACGGAGA+AGG 0.560494 7.2:+2829496 None:intergenic
GATGGGTCGTTCACTTCAAA+GGG 0.562374 7.2:-2827373 MS.gene050507:CDS
ACAATCTTGGCTGCTGCCGA+AGG 0.564362 7.2:-2824615 MS.gene050507:CDS
GAAAACCCAGGACTCGGTGA+TGG 0.571859 7.2:+2829541 None:intergenic
AATTACCTGAAGCTTGAGTA+CGG 0.580346 7.2:+2829327 None:intergenic
TAAAACGGGGTATAGAAGAA+GGG 0.585010 7.2:-2826324 MS.gene050507:CDS
CTTACTAATAATTTGCTCGA+AGG 0.586071 7.2:+2824522 None:intergenic
CAACTTTCAATTGAAGAGCG+AGG 0.593938 7.2:-2826286 MS.gene050507:CDS
GGGCCTTCTCCGTTTAGCGG+CGG 0.595463 7.2:-2829499 MS.gene050507:CDS
AAAATGATACTCTCTCGGAA+CGG 0.598062 7.2:-2824390 MS.gene050507:CDS
TTTACAAAGGCCGCAAAAGT+GGG 0.602051 7.2:+2824350 None:intergenic
AAAATTTGATGAAGAGACGC+TGG 0.618378 7.2:-2826263 MS.gene050507:CDS
CTGGAGGTAGAATGGGAGGA+AGG 0.621787 7.2:-2829606 None:intergenic
GTTCAGCAATGAATACATAG+TGG 0.625878 7.2:-2826188 MS.gene050507:intron
GCAGATACATCATCTCCAGA+AGG 0.629689 7.2:-2827327 MS.gene050507:CDS
AAAACGGGGTATAGAAGAAG+GGG 0.631384 7.2:-2826323 MS.gene050507:CDS
CATGCCATTACAATTTACAA+AGG 0.632498 7.2:+2824337 None:intergenic
GCATCTGGAGGTAGAATGGG+AGG 0.634245 7.2:-2829610 None:intergenic
ATCCGGATTACTGTATCTCG+GGG 0.671601 7.2:-2826870 MS.gene050507:CDS
TTGTAGGTGGACATAAAACG+GGG 0.693677 7.2:-2826337 MS.gene050507:intron
TACCTGAAGCTTGAGTACGG+TGG 0.724017 7.2:+2829330 None:intergenic
GGTGCAGAGTAAGAAAACCC+AGG 0.731550 7.2:+2829529 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTTAAAAAAATAACTT+TGG - chr7.2:2827840-2827859 MS.gene050507:intron 10.0%
!! AAACTTAAAAAAATAACTTT+GGG - chr7.2:2827841-2827860 MS.gene050507:intron 10.0%
!! AAATAAAAATTCAAAAAACA+GGG + chr7.2:2829075-2829094 None:intergenic 10.0%
!! AATCAAAAAAAAAAAAAAAC+AGG + chr7.2:2829044-2829063 None:intergenic 10.0%
!! ATCAAAAAAAAAAAAAAACA+GGG + chr7.2:2829043-2829062 None:intergenic 10.0%
!! ATTAAAAAATAGATATGAAT+CGG + chr7.2:2828921-2828940 None:intergenic 10.0%
!! ATTATTTACATTTCTTAAAT+AGG - chr7.2:2826163-2826182 MS.gene050507:intron 10.0%
!! CATTTCATTAATTAAAATTT+GGG - chr7.2:2824988-2825007 MS.gene050507:intron 10.0%
!!! AGTTTTAAGTATTATTATTT+AGG + chr7.2:2827385-2827404 None:intergenic 10.0%
!! AAAATGATCTATAAAAGATA+TGG - chr7.2:2828029-2828048 MS.gene050507:intron 15.0%
!! AAATCACAAAACAAATATTT+GGG + chr7.2:2828395-2828414 None:intergenic 15.0%
!! AACAAGAAAACAAAAAAAAA+AGG - chr7.2:2828271-2828290 MS.gene050507:intron 15.0%
!! ACAAGAAAACAAAAAAAAAA+GGG - chr7.2:2828272-2828291 MS.gene050507:intron 15.0%
!! ACTAATCTTATAAATTCAAT+AGG - chr7.2:2828991-2829010 MS.gene050507:intron 15.0%
!! AGACATATAAATAATTCATA+AGG - chr7.2:2825666-2825685 MS.gene050507:intron 15.0%
!! ATGATAATCATAATACTTTA+AGG - chr7.2:2826726-2826745 MS.gene050507:intron 15.0%
!! ATTTATGAATAAAAGGTTAT+TGG - chr7.2:2826412-2826431 MS.gene050507:intron 15.0%
!! CAAATAAAAATTCAAAAAAC+AGG + chr7.2:2829076-2829095 None:intergenic 15.0%
!! CAACATTATTTATTTATTAG+AGG - chr7.2:2827454-2827473 MS.gene050507:intron 15.0%
!! CATATAGATTTATGAATAAA+AGG - chr7.2:2826405-2826424 MS.gene050507:intron 15.0%
!! GAAAAAGTTGTTAATATTAT+TGG - chr7.2:2824743-2824762 MS.gene050507:intron 15.0%
!! GCATTTCATTAATTAAAATT+TGG - chr7.2:2824987-2825006 MS.gene050507:intron 15.0%
!! TAAAATAACTAAGTAAAAGT+AGG - chr7.2:2826013-2826032 MS.gene050507:intron 15.0%
!! TAAATCACAAAACAAATATT+TGG + chr7.2:2828396-2828415 None:intergenic 15.0%
!! TTAAAAAATAGATATGAATC+GGG + chr7.2:2828920-2828939 None:intergenic 15.0%
!! TTATACTTACTTTATATTGT+TGG - chr7.2:2827520-2827539 MS.gene050507:intron 15.0%
!! TTATTACAAAATATGCATTT+AGG + chr7.2:2825647-2825666 None:intergenic 15.0%
!! TTTATGAATAAAAGGTTATT+GGG - chr7.2:2826413-2826432 MS.gene050507:intron 15.0%
!! TTTGATTCATTAAAAAATGA+AGG - chr7.2:2828360-2828379 MS.gene050507:intron 15.0%
!!! AATTTTAAAAAATGAAGGTA+CGG - chr7.2:2825815-2825834 MS.gene050507:intron 15.0%
!!! ATTTTGAATAACATAAAGTA+TGG - chr7.2:2826203-2826222 MS.gene050507:CDS 15.0%
!!! CTGTTTTTTGAATTTTTATT+TGG - chr7.2:2829074-2829093 MS.gene050507:intron 15.0%
!!! TACAAATGAATTAGTTATTT+TGG - chr7.2:2824808-2824827 MS.gene050507:intron 15.0%
!!! TATCTATTTTTTAATAACAC+AGG - chr7.2:2828926-2828945 MS.gene050507:intron 15.0%
!!! TGTTTTAATTTGTTCTTATA+TGG - chr7.2:2828752-2828771 MS.gene050507:intron 15.0%
!!! TTTATAGATCATTTTTCTTT+TGG + chr7.2:2828024-2828043 None:intergenic 15.0%
!! AATATCAAGAGAGAAAAATA+AGG + chr7.2:2828833-2828852 None:intergenic 20.0%
!! AATCTTTCAAATAGATCAAT+AGG - chr7.2:2825742-2825761 MS.gene050507:intron 20.0%
!! ACATAATAAAAAATAGTGTG+AGG - chr7.2:2825025-2825044 MS.gene050507:intron 20.0%
!! AGAAAAATCGTGTAAAAAAA+AGG + chr7.2:2829491-2829510 None:intergenic 20.0%
!! GTTGTTAATATTATTGGAAA+TGG - chr7.2:2824749-2824768 MS.gene050507:intron 20.0%
!! TAAAAGATATGGATAATGTT+TGG - chr7.2:2828040-2828059 MS.gene050507:intron 20.0%
!! TACATTTATGATTATGATGA+TGG + chr7.2:2824685-2824704 None:intergenic 20.0%
!! TATATATCAGATAACAATCT+TGG - chr7.2:2829318-2829337 MS.gene050507:intron 20.0%
!! TATATGCCATAACAATTATA+GGG + chr7.2:2825118-2825137 None:intergenic 20.0%
!! TATTCAAAATCCTTATTAAC+AGG + chr7.2:2826193-2826212 None:intergenic 20.0%
!! TTAACATGAATGATCTTATA+TGG + chr7.2:2828174-2828193 None:intergenic 20.0%
!! TTTAGATATTGATGTCAATT+GGG + chr7.2:2827984-2828003 None:intergenic 20.0%
!!! AAAAATCTAGAACATTTATG+TGG + chr7.2:2827183-2827202 None:intergenic 20.0%
!!! AAAGTATTATGATTATCATG+TGG + chr7.2:2826725-2826744 None:intergenic 20.0%
!!! ATGAATTAGTTATTTTGGAA+CGG - chr7.2:2824813-2824832 MS.gene050507:intron 20.0%
!!! ATTTTAAAAAATGAAGGTAC+GGG - chr7.2:2825816-2825835 MS.gene050507:intron 20.0%
!!! ATTTTTCTATAATTACTTGC+AGG - chr7.2:2829503-2829522 MS.gene050507:CDS 20.0%
!!! CTTAGTTATTTTATCGTAAT+TGG + chr7.2:2826006-2826025 None:intergenic 20.0%
!!! GACATACAATTAATCATTTT+AGG - chr7.2:2827926-2827945 MS.gene050507:intron 20.0%
!!! TATTCACTATTTTGAATCTT+TGG - chr7.2:2826497-2826516 MS.gene050507:intron 20.0%
!!! TGCTAAATTGACTTTTTTAA+AGG - chr7.2:2826233-2826252 MS.gene050507:CDS 20.0%
!!! TTATTTTCCAACATTTTTGT+AGG - chr7.2:2827593-2827612 MS.gene050507:intron 20.0%
!!! TTTAGTATTTTGTGTAATGA+AGG - chr7.2:2826771-2826790 MS.gene050507:intron 20.0%
! AAACAACCCTATAATTGTTA+TGG - chr7.2:2825109-2825128 MS.gene050507:intron 25.0%
! AAATGAAAATGATACTCTCT+CGG - chr7.2:2829551-2829570 MS.gene050507:CDS 25.0%
! AACAAAAAAAAAAGGGAACA+AGG - chr7.2:2828279-2828298 MS.gene050507:intron 25.0%
! ATATATCAAGCATATCAACA+AGG + chr7.2:2828213-2828232 None:intergenic 25.0%
! ATTATGATTATCATGTGGTT+AGG + chr7.2:2826720-2826739 None:intergenic 25.0%
! ATTTATTAGAGGTCATCATT+AGG - chr7.2:2827465-2827484 MS.gene050507:intron 25.0%
! CTTTAGATATTGATGTCAAT+TGG + chr7.2:2827985-2828004 None:intergenic 25.0%
! GAAAAGTAAACATAGTCTAA+TGG + chr7.2:2825141-2825160 None:intergenic 25.0%
! GAAACTGAGTTTATAGAAAT+TGG - chr7.2:2827556-2827575 MS.gene050507:intron 25.0%
! GTATATGCCATAACAATTAT+AGG + chr7.2:2825119-2825138 None:intergenic 25.0%
! TAACTAAGTAAAAGTAGGTA+TGG - chr7.2:2826018-2826037 MS.gene050507:intron 25.0%
! TATCAAGGACAAAAAAGAAA+TGG + chr7.2:2828547-2828566 None:intergenic 25.0%
! TATGTTAATCACCAATACTA+GGG + chr7.2:2828886-2828905 None:intergenic 25.0%
! TATTGGAAATGGAAAATAGT+TGG - chr7.2:2824760-2824779 MS.gene050507:intron 25.0%
! TATTGTTGGCATAGAAATAA+AGG - chr7.2:2827534-2827553 MS.gene050507:intron 25.0%
! TTCAAATAGATCAATAGGTA+CGG - chr7.2:2825747-2825766 MS.gene050507:intron 25.0%
! TTTAAGTCTACATTGCATAA+AGG + chr7.2:2827823-2827842 None:intergenic 25.0%
! TTTATTAGAGGTCATCATTA+GGG - chr7.2:2827466-2827485 MS.gene050507:intron 25.0%
!! AAACAACTTTTTGTTCTGTT+TGG + chr7.2:2828578-2828597 None:intergenic 25.0%
!! AGTATCATTTTCATTTTGTG+GGG + chr7.2:2829547-2829566 None:intergenic 25.0%
!! CGTCAAAAGAAAGATAATTT+TGG - chr7.2:2825947-2825966 MS.gene050507:intron 25.0%
!! GAATTTTCTCAAAACCAAAA+AGG + chr7.2:2827273-2827292 None:intergenic 25.0%
!! GAGTATCATTTTCATTTTGT+GGG + chr7.2:2829548-2829567 None:intergenic 25.0%
!! TAAAATTTGGGTTATACAGA+CGG - chr7.2:2825000-2825019 MS.gene050507:intron 25.0%
!! TTTTTATGCAAGCAAAATCA+AGG - chr7.2:2824965-2824984 MS.gene050507:intron 25.0%
!!! AATAGTTTGCAAGTCATTTT+CGG - chr7.2:2829453-2829472 MS.gene050507:CDS 25.0%
!!! AGAGTATCATTTTCATTTTG+TGG + chr7.2:2829549-2829568 None:intergenic 25.0%
!!! AGTTCTATTTTACTGATTGA+TGG - chr7.2:2828669-2828688 MS.gene050507:intron 25.0%
!!! CGGCAAATTTTAAAAAATGA+AGG - chr7.2:2825810-2825829 MS.gene050507:intron 25.0%
!!! CTATATTTTTTGTGCCTTTT+TGG - chr7.2:2827256-2827275 MS.gene050507:intron 25.0%
!!! GTTTTTCTAGTAAATAAGTC+TGG - chr7.2:2826265-2826284 MS.gene050507:CDS 25.0%
!!! TAAAAGAAAAAGTACTGAAG+TGG - chr7.2:2827211-2827230 MS.gene050507:intron 25.0%
!!! TCAGTACTTTTTCTTTTATC+TGG + chr7.2:2827209-2827228 None:intergenic 25.0%
AAAAAAAAAGGGAACAAGGA+AGG - chr7.2:2828283-2828302 MS.gene050507:intron 30.0%
AAAAAACTGTTCATTCTCAG+TGG + chr7.2:2828112-2828131 None:intergenic 30.0%
AAACAATGATTGTTCCATTG+AGG - chr7.2:2828235-2828254 MS.gene050507:intron 30.0%
AACAAGATACTGAGAAATCT+TGG + chr7.2:2826440-2826459 None:intergenic 30.0%
AAGGAAGCTTTACAAAAACT+TGG - chr7.2:2829394-2829413 MS.gene050507:CDS 30.0%
AAGGACAAAAAAGAAATGGT+TGG + chr7.2:2828543-2828562 None:intergenic 30.0%
AAGTAAAAGTAGGTATGGTT+CGG - chr7.2:2826023-2826042 MS.gene050507:intron 30.0%
AAGTAGCAATACATGATTTC+AGG + chr7.2:2826359-2826378 None:intergenic 30.0%
AATAGGTTGTCCTGTTAATA+AGG - chr7.2:2826180-2826199 MS.gene050507:intron 30.0%
AATATGTAACTCAAACCTTC+TGG + chr7.2:2826637-2826656 None:intergenic 30.0%
ACTTAAGAAAGAGAATCCTA+GGG + chr7.2:2825215-2825234 None:intergenic 30.0%
AGATTAGTAATATGCCTGTT+TGG + chr7.2:2828979-2828998 None:intergenic 30.0%
AGTTACAATCCAAATTCACT+CGG + chr7.2:2828791-2828810 None:intergenic 30.0%
ATATAAACCTGGATGTTGAA+CGG + chr7.2:2827961-2827980 None:intergenic 30.0%
ATCTATTCCAGCAATACAAT+TGG + chr7.2:2827138-2827157 None:intergenic 30.0%
ATGCATGTAGAAAATGATGA+GGG - chr7.2:2826876-2826895 MS.gene050507:CDS 30.0%
ATGTTAATCACCAATACTAG+GGG + chr7.2:2828885-2828904 None:intergenic 30.0%
CTATGTTAATCACCAATACT+AGG + chr7.2:2828887-2828906 None:intergenic 30.0%
GAACAACAAAGTTTAGAAGA+AGG + chr7.2:2829297-2829316 None:intergenic 30.0%
GGCTTAAATTTCTGAACTAA+AGG - chr7.2:2825183-2825202 MS.gene050507:intron 30.0%
GTGCTTTCAATAAATTGTGT+TGG - chr7.2:2825511-2825530 MS.gene050507:intron 30.0%
TAGTGGTATCATAACTATCT+TGG - chr7.2:2827775-2827794 MS.gene050507:intron 30.0%
TCAAATAGATCAATAGGTAC+GGG - chr7.2:2825748-2825767 MS.gene050507:intron 30.0%
TCAACGTTAACAACATAAAG+AGG - chr7.2:2827706-2827725 MS.gene050507:intron 30.0%
TCAGTAAAATAGAACTACAG+AGG + chr7.2:2828665-2828684 None:intergenic 30.0%
TGACCAAAAATCACATGTTT+AGG + chr7.2:2826673-2826692 None:intergenic 30.0%
TGATGTTGTGTAAACTATTG+TGG - chr7.2:2826830-2826849 MS.gene050507:intron 30.0%
TGCTAAGATGAGAAATAAAC+TGG + chr7.2:2824517-2824536 None:intergenic 30.0%
TGGCTTCGTCATATTTATTT+AGG - chr7.2:2825331-2825350 MS.gene050507:intron 30.0%
TTATATGGCATGTGAAAAAG+TGG + chr7.2:2828159-2828178 None:intergenic 30.0%
! AATGATAGTGTTGTTCTTGT+AGG - chr7.2:2826537-2826556 MS.gene050507:intron 30.0%
! AGTTTATTTCTCATCTTAGC+AGG - chr7.2:2824516-2824535 MS.gene050507:intron 30.0%
! ATGTGACTTCTTCTTTTAGT+GGG - chr7.2:2825243-2825262 MS.gene050507:intron 30.0%
! CTTTTGACGAAAATAGTAGA+GGG + chr7.2:2825936-2825955 None:intergenic 30.0%
! GTTCCTAAACATGTGATTTT+TGG - chr7.2:2826667-2826686 MS.gene050507:intron 30.0%
! TATGTGACTTCTTCTTTTAG+TGG - chr7.2:2825242-2825261 MS.gene050507:intron 30.0%
! TCTTTTGACGAAAATAGTAG+AGG + chr7.2:2825937-2825956 None:intergenic 30.0%
! TGGAAAATAGTTGGTCATTT+TGG - chr7.2:2824769-2824788 MS.gene050507:intron 30.0%
! TTTTCCAACATTTTTGTAGG+TGG - chr7.2:2827596-2827615 MS.gene050507:intron 30.0%
! TTTTGTAGGTGGACATAAAA+CGG - chr7.2:2827607-2827626 MS.gene050507:intron 30.0%
!! AGTATTGGTGATTAACATAG+TGG - chr7.2:2828887-2828906 MS.gene050507:intron 30.0%
!! CTTACTAATAATTTGCTCGA+AGG + chr7.2:2829427-2829446 None:intergenic 30.0%
!! GGAAAATAGTTGGTCATTTT+GGG - chr7.2:2824770-2824789 MS.gene050507:intron 30.0%
!! TAATAATTTGCTCGAAGGAA+TGG + chr7.2:2829422-2829441 None:intergenic 30.0%
!! TCACTATTTTGAATCTTTGG+TGG - chr7.2:2826500-2826519 MS.gene050507:intron 30.0%
!!! AATTAGTTATTTTGGAACGG+AGG - chr7.2:2824816-2824835 MS.gene050507:intron 30.0%
!!! ACTGAGAATGAACAGTTTTT+TGG - chr7.2:2828111-2828130 MS.gene050507:intron 30.0%
!!! ATTAGTTATTTTGGAACGGA+GGG - chr7.2:2824817-2824836 MS.gene050507:intron 30.0%
!!! ATTATAGGGTTGTTTTTTCC+AGG + chr7.2:2825104-2825123 None:intergenic 30.0%
!!! CTGAGAATGAACAGTTTTTT+GGG - chr7.2:2828112-2828131 MS.gene050507:intron 30.0%
!!! CTTCACTTTTTCAAGTGATT+AGG + chr7.2:2829256-2829275 None:intergenic 30.0%
AAAATAGATATGAATCGGGC+AGG + chr7.2:2828916-2828935 None:intergenic 35.0%
AAAATGATACTCTCTCGGAA+CGG - chr7.2:2829556-2829575 MS.gene050507:CDS 35.0%
AAAATTTGATGAAGAGACGC+TGG - chr7.2:2827683-2827702 MS.gene050507:intron 35.0%
AAATTTGCCGTATTACGTAC+CGG + chr7.2:2825800-2825819 None:intergenic 35.0%
AACAAGGAAGGAAAGCAATA+TGG - chr7.2:2828295-2828314 MS.gene050507:intron 35.0%
AATTACCTGAAGCTTGAGTA+CGG + chr7.2:2824622-2824641 None:intergenic 35.0%
ACTATTTCCACCCTTAACTT+CGG + chr7.2:2825550-2825569 None:intergenic 35.0%
AGGAAGTTTATGTTCTCCTT+CGG + chr7.2:2829350-2829369 None:intergenic 35.0%
AGGTAAGGATGAAATAAGTC+AGG + chr7.2:2826339-2826358 None:intergenic 35.0%
ATAAAACGGGGTATAGAAGA+AGG - chr7.2:2827621-2827640 MS.gene050507:intron 35.0%
ATAGCCTCAACTCAATATGT+AGG - chr7.2:2825707-2825726 MS.gene050507:intron 35.0%
ATGTCCACCTACAAAAATGT+TGG + chr7.2:2827603-2827622 None:intergenic 35.0%
CAACACAAAAACATGAAGCA+TGG + chr7.2:2824887-2824906 None:intergenic 35.0%
CACTTAAGAAAGAGAATCCT+AGG + chr7.2:2825216-2825235 None:intergenic 35.0%
CATAAACTTCCTAGCATCAA+TGG - chr7.2:2829358-2829377 MS.gene050507:CDS 35.0%
CTCTCTTGATATTTGTCTGA+TGG - chr7.2:2828840-2828859 MS.gene050507:intron 35.0%
GATGCATGTAGAAAATGATG+AGG - chr7.2:2826875-2826894 MS.gene050507:CDS 35.0%
GCAAGGAATAAAGAAAACAC+TGG + chr7.2:2824852-2824871 None:intergenic 35.0%
GGACATAGATGCAGATTAAT+GGG + chr7.2:2828958-2828977 None:intergenic 35.0%
GTCAATATTGCATACAACGA+TGG - chr7.2:2825162-2825181 MS.gene050507:intron 35.0%
GTTCAGCAATGAATACATAG+TGG - chr7.2:2827758-2827777 MS.gene050507:intron 35.0%
TAAAACGGGGTATAGAAGAA+GGG - chr7.2:2827622-2827641 MS.gene050507:intron 35.0%
TACCATTCCAATTGTATTGC+TGG - chr7.2:2827128-2827147 MS.gene050507:intron 35.0%
TACTACTTTGTCTTCCTCAA+TGG + chr7.2:2828252-2828271 None:intergenic 35.0%
TGAAAAAGTGAAGTTCCATG+AGG - chr7.2:2829263-2829282 MS.gene050507:intron 35.0%
TGAGTCTGATTACATTTGTC+TGG - chr7.2:2828703-2828722 MS.gene050507:intron 35.0%
TGGACATAGATGCAGATTAA+TGG + chr7.2:2828959-2828978 None:intergenic 35.0%
TGTCAATTGGGATATAAACC+TGG + chr7.2:2827972-2827991 None:intergenic 35.0%
TGTTTGGTAGAGGATTATCA+AGG + chr7.2:2828562-2828581 None:intergenic 35.0%
TTCCAGCAATACAATTGGAA+TGG + chr7.2:2827133-2827152 None:intergenic 35.0%
TTTCTTTCTGATCGTGATGA+GGG - chr7.2:2824567-2824586 MS.gene050507:CDS 35.0%
TTTGTAGGTGGACATAAAAC+GGG - chr7.2:2827608-2827627 MS.gene050507:intron 35.0%
! AAATAAGTCTGGCTTAGCTT+TGG - chr7.2:2826276-2826295 MS.gene050507:CDS 35.0%
! ATAGTGTTGTTCTTGTAGGT+TGG - chr7.2:2826541-2826560 MS.gene050507:intron 35.0%
! CTTTTTGTTCTGTTTGGTAG+AGG + chr7.2:2828572-2828591 None:intergenic 35.0%
! GACTTTTGAATGTTGTGTTG+CGG + chr7.2:2828511-2828530 None:intergenic 35.0%
! GCAATACATGATTTCAGGTA+AGG + chr7.2:2826354-2826373 None:intergenic 35.0%
! GGTTTGAGTTACATATTGAC+AGG - chr7.2:2826640-2826659 MS.gene050507:intron 35.0%
! GTGTTGCTCTTCAGAAAATT+AGG - chr7.2:2828332-2828351 MS.gene050507:intron 35.0%
! TCTTTTAGTGGGATTTACGT+TGG - chr7.2:2825254-2825273 MS.gene050507:intron 35.0%
! TTAGCCTACATATTGAGTTG+AGG + chr7.2:2825714-2825733 None:intergenic 35.0%
! TTTTCTTTCTGATCGTGATG+AGG - chr7.2:2824566-2824585 MS.gene050507:CDS 35.0%
! TTTTGCTTAGCCGAAGTTAA+GGG - chr7.2:2825537-2825556 MS.gene050507:intron 35.0%
! TTTTTGCTTAGCCGAAGTTA+AGG - chr7.2:2825536-2825555 MS.gene050507:intron 35.0%
!! ATCATATACTCTCTGAAGCA+TGG + chr7.2:2826109-2826128 None:intergenic 35.0%
!! CATGCTTCATGTTTTTGTGT+TGG - chr7.2:2824885-2824904 MS.gene050507:intron 35.0%
!! TCAAGTATCGACAAACGATT+TGG - chr7.2:2829160-2829179 MS.gene050507:intron 35.0%
!! TCATATACTCTCTGAAGCAT+GGG + chr7.2:2826108-2826127 None:intergenic 35.0%
!! TTCTTGTAGGTTGGTTTGTT+GGG - chr7.2:2826550-2826569 MS.gene050507:intron 35.0%
!! TTGAAGATTACCCACTTTTG+CGG - chr7.2:2829586-2829605 MS.gene050507:CDS 35.0%
AAAACGGGGTATAGAAGAAG+GGG - chr7.2:2827623-2827642 MS.gene050507:intron 40.0%
AAAGTGAAGTTCCATGAGGA+CGG - chr7.2:2829267-2829286 MS.gene050507:intron 40.0%
AAATATGACGAAGCCAACTG+AGG + chr7.2:2825327-2825346 None:intergenic 40.0%
AAATGATACTCTCTCGGAAC+GGG - chr7.2:2829557-2829576 MS.gene050507:CDS 40.0%
AACTGAGGTGAGAAAGAAAC+TGG + chr7.2:2825312-2825331 None:intergenic 40.0%
AGCACAAGTTAACCTGTTCT+AGG - chr7.2:2827893-2827912 MS.gene050507:intron 40.0%
AGTGTGAGGAGAATACGATA+GGG - chr7.2:2825039-2825058 MS.gene050507:intron 40.0%
AGTTTCTTTCTCACCTCAGT+TGG - chr7.2:2825311-2825330 MS.gene050507:intron 40.0%
ATCTGCATCTATGTCCAAAC+AGG - chr7.2:2828962-2828981 MS.gene050507:intron 40.0%
ATTTACGTTGGTCCTGCTTT+AGG - chr7.2:2825266-2825285 MS.gene050507:intron 40.0%
CAACTTTCAATTGAAGAGCG+AGG - chr7.2:2827660-2827679 MS.gene050507:intron 40.0%
CAATGGAAGTGGAAACTTGA+AGG - chr7.2:2829375-2829394 MS.gene050507:CDS 40.0%
CACTTCAAAGGGATCTCAAT+AGG - chr7.2:2826584-2826603 MS.gene050507:intron 40.0%
CATGGCAAATACAAGAAGCA+AGG + chr7.2:2824869-2824888 None:intergenic 40.0%
CATTCTCAGTGGAATGCATT+AGG + chr7.2:2828101-2828120 None:intergenic 40.0%
CTTACTCTGCACCGTATTAT+GGG - chr7.2:2824427-2824446 MS.gene050507:intron 40.0%
CTTCTAAGTTTCTTCCAGGT+TGG - chr7.2:2825354-2825373 MS.gene050507:intron 40.0%
GTACATTATTCACACCAACC+TGG + chr7.2:2825371-2825390 None:intergenic 40.0%
GTTAAGGGTGGAAATAGTCT+AGG - chr7.2:2825552-2825571 MS.gene050507:intron 40.0%
TAAGTCAGGCAATCCAACAA+AGG + chr7.2:2826325-2826344 None:intergenic 40.0%
TAATTACTTGCAGGCAGTTG+AGG - chr7.2:2829512-2829531 MS.gene050507:CDS 40.0%
TAGATCAATAGGTACGGGTA+CGG - chr7.2:2825753-2825772 MS.gene050507:intron 40.0%
TAGGCTTCTAAGTTTCTTCC+AGG - chr7.2:2825350-2825369 MS.gene050507:intron 40.0%
TAGTGTGAGGAGAATACGAT+AGG - chr7.2:2825038-2825057 MS.gene050507:intron 40.0%
TCTTACTCTGCACCGTATTA+TGG - chr7.2:2824426-2824445 MS.gene050507:intron 40.0%
TGAAAAAGTGGCTAGTGGAA+AGG + chr7.2:2828147-2828166 None:intergenic 40.0%
TTGTAGGTGGACATAAAACG+GGG - chr7.2:2827609-2827628 MS.gene050507:intron 40.0%
TTTACGTTGGTCCTGCTTTA+GGG - chr7.2:2825267-2825286 MS.gene050507:intron 40.0%
TTTACTTTGGACCTGCTGTT+GGG - chr7.2:2824472-2824491 MS.gene050507:intron 40.0%
TTTCAGCGAACAGATTTGCA+GGG + chr7.2:2829122-2829141 None:intergenic 40.0%
TTTCCACTTCCATTGATGCT+AGG + chr7.2:2829370-2829389 None:intergenic 40.0%
! TCTAGTTTCATGCCTAGAAC+AGG + chr7.2:2827908-2827927 None:intergenic 40.0%
! TTTTCAGCGAACAGATTTGC+AGG + chr7.2:2829123-2829142 None:intergenic 40.0%
!! AGACGTCATTAGCTTTGCTT+CGG - chr7.2:2827052-2827071 MS.gene050507:intron 40.0%
!! ATTGGTGCCGCAAAAATGTA+CGG + chr7.2:2825988-2826007 None:intergenic 40.0%
!! GTTCTTGTAGGTTGGTTTGT+TGG - chr7.2:2826549-2826568 MS.gene050507:intron 40.0%
!! TCTTGTAGGTTGGTTTGTTG+GGG - chr7.2:2826551-2826570 MS.gene050507:intron 40.0%
!!! AGGTTTCGCTGCTTTTGTTT+TGG - chr7.2:2824536-2824555 MS.gene050507:CDS 40.0%
!!! GCTGCTTTTGTTTTGGTTTC+TGG - chr7.2:2824543-2824562 MS.gene050507:CDS 40.0%
AAAAGTGGCTAGTGGAAAGG+TGG + chr7.2:2828144-2828163 None:intergenic 45.0%
AACGGAGAAGGCCCATAATA+CGG + chr7.2:2824441-2824460 None:intergenic 45.0%
AACTCAGGTCTACCAAATCC+CGG + chr7.2:2825582-2825601 None:intergenic 45.0%
AAGAGCAACACAGATGAGAG+AGG + chr7.2:2828323-2828342 None:intergenic 45.0%
AAGCATGGGTACTCCAAACA+CGG + chr7.2:2826094-2826113 None:intergenic 45.0%
AATGACGTCTCTGCAACAGA+AGG + chr7.2:2827042-2827061 None:intergenic 45.0%
ACGAGAAGCCAGAGATCTAA+TGG - chr7.2:2827735-2827754 MS.gene050507:intron 45.0%
ACTAGGCTAAGGACCTTTGT+TGG - chr7.2:2826309-2826328 MS.gene050507:CDS 45.0%
AGATGCGTTCCGAGTGAATT+TGG - chr7.2:2828779-2828798 MS.gene050507:intron 45.0%
AGCTTAAGGCTTGAGTTTGG+TGG - chr7.2:2825616-2825635 MS.gene050507:intron 45.0%
AGGGTGGAAATAGTCTAGGT+TGG - chr7.2:2825556-2825575 MS.gene050507:intron 45.0%
ATATGCATGGTGGCTCTCAA+TGG + chr7.2:2825400-2825419 None:intergenic 45.0%
ATCCGGATTACTGTATCTCG+GGG - chr7.2:2827076-2827095 MS.gene050507:intron 45.0%
CATCCGGATTACTGTATCTC+GGG - chr7.2:2827075-2827094 MS.gene050507:intron 45.0%
CCATAAGCGAAGCATATGCA+TGG + chr7.2:2825413-2825432 None:intergenic 45.0%
CCATGCATATGCTTCGCTTA+TGG - chr7.2:2825410-2825429 MS.gene050507:intron 45.0%
CGAGAAGCCAGAGATCTAAT+GGG - chr7.2:2827736-2827755 MS.gene050507:intron 45.0%
CTGGAATAGATGACGTCTTG+TGG - chr7.2:2827147-2827166 MS.gene050507:intron 45.0%
CTTCCTAGCATCAATGGAAG+TGG - chr7.2:2829364-2829383 MS.gene050507:CDS 45.0%
GAACTAAAGGCTAATGCCCT+AGG - chr7.2:2825196-2825215 MS.gene050507:intron 45.0%
GAGTAAGAAAACCCAGGACT+CGG + chr7.2:2824414-2824433 None:intergenic 45.0%
GATGGGTCGTTCACTTCAAA+GGG - chr7.2:2826573-2826592 MS.gene050507:intron 45.0%
GCAAGCTTAAGGCTTGAGTT+TGG - chr7.2:2825613-2825632 MS.gene050507:intron 45.0%
GCAGATACATCATCTCCAGA+AGG - chr7.2:2826619-2826638 MS.gene050507:intron 45.0%
GCATCCGGATTACTGTATCT+CGG - chr7.2:2827074-2827093 MS.gene050507:intron 45.0%
GCATGTGAAAAAGTGGCTAG+TGG + chr7.2:2828152-2828171 None:intergenic 45.0%
GTTTACTTTGGACCTGCTGT+TGG - chr7.2:2824471-2824490 MS.gene050507:intron 45.0%
TAAGCGAAGCATATGCATGG+TGG + chr7.2:2825410-2825429 None:intergenic 45.0%
TAATGTAGCTGAAAGCTGCG+TGG - chr7.2:2826985-2827004 MS.gene050507:intron 45.0%
TACCCCGAGATACAGTAATC+CGG + chr7.2:2827081-2827100 None:intergenic 45.0%
TGCTGAACCCATTAGATCTC+TGG + chr7.2:2827746-2827765 None:intergenic 45.0%
TTACTTTGGACCTGCTGTTG+GGG - chr7.2:2824473-2824492 MS.gene050507:intron 45.0%
! AAATGAAGGTACGGGTACGT+TGG - chr7.2:2825824-2825843 MS.gene050507:intron 45.0%
! GGTAGACCTGAGTTTGTTCA+GGG - chr7.2:2825588-2825607 MS.gene050507:intron 45.0%
! GTTTGAGGTAGACTAGGCTA+AGG - chr7.2:2826298-2826317 MS.gene050507:CDS 45.0%
! TCAACGCCCGTACATTTTTG+CGG - chr7.2:2825978-2825997 MS.gene050507:intron 45.0%
! TGGAAATAGTCTAGGTTGGC+CGG - chr7.2:2825560-2825579 MS.gene050507:intron 45.0%
! TGGTAGACCTGAGTTTGTTC+AGG - chr7.2:2825587-2825606 MS.gene050507:intron 45.0%
!! ACTGGTACCGGTACGTAATA+CGG - chr7.2:2825790-2825809 MS.gene050507:intron 45.0%
!! ATTAGCTTTGCTTCGGCATC+CGG - chr7.2:2827059-2827078 MS.gene050507:intron 45.0%
!! GCAAGAGCACTGCTATTTGT+TGG - chr7.2:2825075-2825094 MS.gene050507:intron 45.0%
!! GCTTTGGTTTGAGGTAGACT+AGG - chr7.2:2826292-2826311 MS.gene050507:CDS 45.0%
!! TAGGTTGGTTTGTTGGGGAT+GGG - chr7.2:2826556-2826575 MS.gene050507:intron 45.0%
!! TCTGGCTTAGCTTTGGTTTG+AGG - chr7.2:2826283-2826302 MS.gene050507:CDS 45.0%
!! TTGGTGCCGCAAAAATGTAC+GGG + chr7.2:2825987-2826006 None:intergenic 45.0%
AACCACCGTACTCAAGCTTC+AGG - chr7.2:2824614-2824633 MS.gene050507:CDS 50.0%
AAGAAGGTGAACCGTCCTCA+TGG + chr7.2:2829281-2829300 None:intergenic 50.0%
AAGTAAACCCCGCCGCTAAA+CGG + chr7.2:2824459-2824478 None:intergenic 50.0%
CCTCTTACCGTTCAACATCC+AGG - chr7.2:2827951-2827970 MS.gene050507:intron 50.0%
CCTGGATGTTGAACGGTAAG+AGG + chr7.2:2827954-2827973 None:intergenic 50.0%
CGTCTTCATCTTCGTCGTCT+AGG - chr7.2:2824370-2824389 MS.gene050507:CDS 50.0%
CTCAGTGGAATGCATTAGGC+TGG + chr7.2:2828097-2828116 None:intergenic 50.0%
GACAGTCATGTGTAGTGCAG+TGG + chr7.2:2826468-2826487 None:intergenic 50.0%
GGATGGGTCGTTCACTTCAA+AGG - chr7.2:2826572-2826591 MS.gene050507:intron 50.0%
GGTAGTGTTCTTACTGCTGC+TGG - chr7.2:2824588-2824607 MS.gene050507:CDS 50.0%
GGTGCAGAGTAAGAAAACCC+AGG + chr7.2:2824420-2824439 None:intergenic 50.0%
TACCGGTACTTCTCCGTGTT+TGG - chr7.2:2826078-2826097 MS.gene050507:intron 50.0%
TACCTGAAGCTTGAGTACGG+TGG + chr7.2:2824619-2824638 None:intergenic 50.0%
TATGGGCCTTCTCCGTTTAG+CGG - chr7.2:2824444-2824463 MS.gene050507:intron 50.0%
TCCTCACTGAACCCTAAAGC+AGG + chr7.2:2825281-2825300 None:intergenic 50.0%
TGCTTAGCCGAAGTTAAGGG+TGG - chr7.2:2825540-2825559 MS.gene050507:intron 50.0%
TGTTCAGGGTCGCAAGCTTA+AGG - chr7.2:2825602-2825621 MS.gene050507:intron 50.0%
TTGCGACCCTGAACAAACTC+AGG + chr7.2:2825597-2825616 None:intergenic 50.0%
TTTAGCGGCGGGGTTTACTT+TGG - chr7.2:2824459-2824478 MS.gene050507:intron 50.0%
! ACTGCTATTTGTTGGTCGCC+TGG - chr7.2:2825083-2825102 MS.gene050507:intron 50.0%
! CTCCAAACACGGAGAAGTAC+CGG + chr7.2:2826083-2826102 None:intergenic 50.0%
! GGAAATAGTCTAGGTTGGCC+GGG - chr7.2:2825561-2825580 MS.gene050507:intron 50.0%
! TGCAGGCAGTTGAGGTGTTA+TGG - chr7.2:2829520-2829539 MS.gene050507:CDS 50.0%
!! GTAGGTTGGTTTGTTGGGGA+TGG - chr7.2:2826555-2826574 MS.gene050507:intron 50.0%
!! TCCTGCTTTAGGGTTCAGTG+AGG - chr7.2:2825277-2825296 MS.gene050507:intron 50.0%
ACAATCTTGGCTGCTGCCGA+AGG - chr7.2:2829331-2829350 MS.gene050507:intron 55.0%
ACCGGTACCAGTACCCATAC+CGG + chr7.2:2825782-2825801 None:intergenic 55.0%
ACGAGTACCATACGCGTACC+CGG - chr7.2:2826055-2826074 MS.gene050507:intron 55.0%
ATAGGTACGGGTACGGTACC+CGG - chr7.2:2825760-2825779 MS.gene050507:intron 55.0%
CAGTTCCATCACCGAGTCCT+GGG - chr7.2:2824400-2824419 MS.gene050507:CDS 55.0%
GTTTGCGTCGCCCCTAGTAT+TGG - chr7.2:2828872-2828891 MS.gene050507:intron 55.0%
TCAGTTCCATCACCGAGTCC+TGG - chr7.2:2824399-2824418 MS.gene050507:CDS 55.0%
TTTGGACCTGCTGTTGGGGT+TGG - chr7.2:2824477-2824496 MS.gene050507:intron 55.0%
! AGTCTAGGTTGGCCGGGATT+TGG - chr7.2:2825567-2825586 MS.gene050507:intron 55.0%
!! ACACGGAGAAGTACCGGTAC+CGG + chr7.2:2826077-2826096 None:intergenic 55.0%
!! GAAAACCCAGGACTCGGTGA+TGG + chr7.2:2824408-2824427 None:intergenic 55.0%
ACCATACGCGTACCCGGTAC+CGG - chr7.2:2826061-2826080 MS.gene050507:intron 60.0%
ACGGGTACGGTACCCGGTAT+GGG - chr7.2:2825766-2825785 MS.gene050507:intron 60.0%
ACGGTACCCGGTATGGGTAC+TGG - chr7.2:2825772-2825791 MS.gene050507:intron 60.0%
CCAACTCCAACCCCAACAGC+AGG + chr7.2:2824486-2824505 None:intergenic 60.0%
CCGGTACCAGTACCCATACC+GGG + chr7.2:2825781-2825800 None:intergenic 60.0%
CCTGCTGTTGGGGTTGGAGT+TGG - chr7.2:2824483-2824502 MS.gene050507:intron 60.0%
TACGGGTACGGTACCCGGTA+TGG - chr7.2:2825765-2825784 MS.gene050507:intron 60.0%
!! CACGGAGAAGTACCGGTACC+GGG + chr7.2:2826076-2826095 None:intergenic 60.0%
!! CCCGGTATGGGTACTGGTAC+CGG - chr7.2:2825778-2825797 MS.gene050507:intron 60.0%
!! GTTGGGGTTGGAGTTGGTGC+TGG - chr7.2:2824489-2824508 MS.gene050507:intron 60.0%
ACCCCGCCGCTAAACGGAGA+AGG + chr7.2:2824453-2824472 None:intergenic 65.0%
GCCTTCTCCGTTTAGCGGCG+GGG - chr7.2:2824449-2824468 MS.gene050507:intron 65.0%
GGCCTTCTCCGTTTAGCGGC+GGG - chr7.2:2824448-2824467 MS.gene050507:intron 65.0%
GGGCCTTCTCCGTTTAGCGG+CGG - chr7.2:2824447-2824466 MS.gene050507:intron 65.0%
! ACCGGTACCGGGTACGCGTA+TGG + chr7.2:2826065-2826084 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 2824351 2829617 2824351 ID=MS.gene050507
chr7.2 mRNA 2824351 2829617 2824351 ID=MS.gene050507.t1;Parent=MS.gene050507
chr7.2 exon 2829333 2829617 2829333 ID=MS.gene050507.t1.exon1;Parent=MS.gene050507.t1
chr7.2 CDS 2829333 2829617 2829333 ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1
chr7.2 exon 2827307 2827409 2827307 ID=MS.gene050507.t1.exon2;Parent=MS.gene050507.t1
chr7.2 CDS 2827307 2827409 2827307 ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1
chr7.2 exon 2826861 2826916 2826861 ID=MS.gene050507.t1.exon3;Parent=MS.gene050507.t1
chr7.2 CDS 2826861 2826916 2826861 ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1
chr7.2 exon 2826189 2826353 2826189 ID=MS.gene050507.t1.exon4;Parent=MS.gene050507.t1
chr7.2 CDS 2826189 2826353 2826189 ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1
chr7.2 exon 2824527 2824640 2824527 ID=MS.gene050507.t1.exon5;Parent=MS.gene050507.t1
chr7.2 CDS 2824527 2824640 2824527 ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1
chr7.2 exon 2824351 2824443 2824351 ID=MS.gene050507.t1.exon6;Parent=MS.gene050507.t1
chr7.2 CDS 2824351 2824443 2824351 ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1
Gene Sequence

>MS.gene050507

ATGGGAGGAAGGTCATCTTCGTCTTCATCTTCGTCGTCTAGGAGTTATTCAGTTCCATCACCGAGTCCTGGGTTTTCTTACTCTGCACCGTATTATGGGCCTTCTCCGTTTAGCGGCGGGGTTTACTTTGGACCTGCTGTTGGGGTTGGAGTTGGTGCTGGTTCCAGTTTATTTCTCATCTTAGCAGGTTTCGCTGCTTTTGTTTTGGTTTCTGGTTTTCTTTCTGATCGTGATGAGGGTAGTGTTCTTACTGCTGCTGGAAAAACCACCGTACTCAAGCTTCAGGTAATTTACTTATTATAACTGACTTAGATGAAAGAGAGAATAGTATCCATCATCATAATCATAAATGTAATGCAAATAATATTAATTAGATGATATATTATAACTAAGAAAAAGTTGTTAATATTATTGGAAATGGAAAATAGTTGGTCATTTTGGGACAATTTTTTTTTTTTACAAATGAATTAGTTATTTTGGAACGGAGGGAGTAGTACACCAGTGTTTTCTTTATTCCTTGCTTCTTGTATTTGCCATGCTTCATGTTTTTGTGTTGGTATCGTTGCTTTTGCGTTTTGAAGTTTAACAAGTATGCTTTTTCTTGTTCTATTTTGTTTTTATGCAAGCAAAATCAAGGCATTTCATTAATTAAAATTTGGGTTATACAGACGGAAACATAATAAAAAATAGTGTGAGGAGAATACGATAGGGATGCTTGCGCTAAGCAAGAGCACTGCTATTTGTTGGTCGCCTGGAAAAAACAACCCTATAATTGTTATGGCATATACCATTAGACTATGTTTACTTTTCTGTCAATATTGCATACAACGATGGCTTAAATTTCTGAACTAAAGGCTAATGCCCTAGGATTCTCTTTCTTAAGTGCTATATTATGTGACTTCTTCTTTTAGTGGGATTTACGTTGGTCCTGCTTTAGGGTTCAGTGAGGATTTAGACTCCAGTTTCTTTCTCACCTCAGTTGGCTTCGTCATATTTATTTAGGCTTCTAAGTTTCTTCCAGGTTGGTGTGAATAATGTACTCACTGCCATTGAGAGCCACCATGCATATGCTTCGCTTATGGTCTAGTTTTTCACATAAATAAACTATTCAAGACAAGTATTTGCATTTGCATTTATAGTTAAGTGAAATGCTCAATCACGTGCTTTCAATAAATTGTGTTGGTATTTTTGCTTAGCCGAAGTTAAGGGTGGAAATAGTCTAGGTTGGCCGGGATTTGGTAGACCTGAGTTTGTTCAGGGTCGCAAGCTTAAGGCTTGAGTTTGGTGGTCTTTCCTAAATGCATATTTTGTAATAAGACATATAAATAATTCATAAGGTAATCACTAAATATGTTTATAGCCTCAACTCAATATGTAGGCTAATATGCTTAAATCTTTCAAATAGATCAATAGGTACGGGTACGGTACCCGGTATGGGTACTGGTACCGGTACGTAATACGGCAAATTTTAAAAAATGAAGGTACGGGTACGTTGGCATAAAACATCAAGAAAATGTTTTTTCATGTTAATTACTACACTTCTATCATCATATTGCTTGAGTTTTTTTTTTTTTAATGCATTCCCTCTACTATTTTCGTCAAAAGAAAGATAATTTTGGTTATTTTGTCAACGCCCGTACATTTTTGCGGCACCAATTACGATAAAATAACTAAGTAAAAGTAGGTATGGTTCGGCACTAAGTTACGAGTACCATACGCGTACCCGGTACCGGTACTTCTCCGTGTTTGGAGTACCCATGCTTCAGAGAGTATATGATTTCAACACTTTAAATAGTAACAACTAAATGTTATATTATTTACATTTCTTAAATAGGTTGTCCTGTTAATAAGGATTTTGAATAACATAAAGTATGGTATGTTTTGCTAAATTGACTTTTTTAAAGGCTTACACTAGTTTTTCTAGTAAATAAGTCTGGCTTAGCTTTGGTTTGAGGTAGACTAGGCTAAGGACCTTTGTTGGATTGCCTGACTTATTTCATCCTTACCTGAAATCATGTATTGCTACTTTTAATCTCACTAATGCATACATTGTTCATATAGATTTATGAATAAAAGGTTATTGGGTCCAAGATTTCTCAGTATCTTGTTAGCTACCACTGCACTACACATGACTGTCATTTCATTTTATTCACTATTTTGAATCTTTGGTGGAATTTCAAATTCTCAATGATAGTGTTGTTCTTGTAGGTTGGTTTGTTGGGGATGGGTCGTTCACTTCAAAGGGATCTCAATAGGATTGCAGAAGTTGCAGATACATCATCTCCAGAAGGTTTGAGTTACATATTGACAGGTGAAGTTCCTAAACATGTGATTTTTGGTCACTTGTCTTTAGTTGTTTCTTTTTTCCTAACCACATGATAATCATAATACTTTAAGGTTTACTGAAAATGTTTAGTGATTTTAGTATTTTGTGTAATGAAGGATTATTAATGAATAATGACATAAAATTAGTGCTTTGTGATGTTGTGTAAACTATTGTGGTTTTTATTGTCAATGTAGTGCAGATGCATGTAGAAAATGATGAGGGTCAAATCTGTTGTTAAAGAAATATAGAAAGTATTGAAAAGAAATAGTTGCGTTAAATATTAAATTACTTCTGAGTTGTATAAATTATAATGTAGCTGAAAGCTGCGTGGCTGTACGAACTACTTTCTGAATCTAATTTGACCTTCTGTTGCAGAGACGTCATTAGCTTTGCTTCGGCATCCGGATTACTGTATCTCGGGGTACTCTTCTGTAAGTGACTTTAATGCTTGTACCATTCCAATTGTATTGCTGGAATAGATGACGTCTTGTGGCACATCATCTCCACATAAATGTTCTAGATTTTTGCTCCAGATAAAAGAAAAAGTACTGAAGTGGCTATATATAGAATTCAGTGCTGCTATATTTTTTGTGCCTTTTTGGTTTTGAGAAAATTCAAGTTTAATGTTATAAGAGTAGTATTTTGTGTCGTGAAAGATGATACTTCACTTTAATAACTCATTGTTGTAAGAGTTGTATTCTGTGTCCTAAATAATAATACTTAAAACTTCTATGTTTGCTGTTTATAAAAAGTTAACTGTATCTAATATCTACTATACAACATTATTTATTTATTAGAGGTCATCATTAGGGAATTTTTTTCTAAGCTCACTTGCAATTTAAATTATACTTACTTTATATTGTTGGCATAGAAATAAAGGAAACTGAGTTTATAGAAATTGGAAAGTTGAAAGCACTTATTTTCCAACATTTTTGTAGGTGGACATAAAACGGGGTATAGAAGAAGGGGAGAAACATTTTAATCAACTTTCAATTGAAGAGCGAGGAAAATTTGATGAAGAGACGCTGGTCAACGTTAACAACATAAAGAGGCAAAGCACGAGAAGCCAGAGATCTAATGGGTTCAGCAATGAATACATAGTGGTATCATAACTATCTTGGCGTCTTTTCAACATGTTGTATTCCTTTATGCAATGTAGACTTAAAACTTAAAAAAATAACTTTGGGATTAGAATGACATAAAAAAATCAGATATTAGCACAAGTTAACCTGTTCTAGGCATGAAACTAGACATACAATTAATCATTTTAGGCACCTCTTACCGTTCAACATCCAGGTTTATATCCCAATTGACATCAATATCTAAAGAAGAATGTTTTTCTATCCAAAAGAAAAATGATCTATAAAAGATATGGATAATGTTTGGTCTATGATGTCGTGATGTAAGCATTATGCTTCCAGCCTAATGCATTCCACTGAGAATGAACAGTTTTTTGGGTAGATTCCACCTTTCCACTAGCCACTTTTTCACATGCCATATAAGATCATTCATGTTAATGTTTTCAAAGACGATCCTTGTTGATATGCTTGATATATGTAAACAATGATTGTTCCATTGAGGAAGACAAAGTAGTAACAAGAAAACAAAAAAAAAAGGGAACAAGGAAGGAAAGCAATATGGAACCTCTCTCATCTGTGTTGCTCTTCAGAAAATTAGGATGCATTTGATTCATTAAAAAATGAAGGAATGAGTGACCCAAATATTTGTTTTGTGATTTATTTTAAAATAGTTGTAGTACGAAAAAAAAGTTGATGCATAGAACAAAGTCAAATACTATATTACTCAGTCAACTATGAAACGACTTTTTGTTCCGCAACACAACATTCAAAAGTCAAAAAATAACCAACCATTTCTTTTTTGTCCTTGATAATCCTCTACCAAACAGAACAAAAAGTTGTTTCATTACTCAACTACTTAAATTGTGTTTTTCTGTTTGTGTTGTTACTTAACATGCATCAAATGTACCTCTGTAGTTCTATTTTACTGATTGATGGATCAGCTCAGTTGAGTCTGATTACATTTGTCTGGTTGAAGTCTTGAAGAAATAGACAGTTTGTTTTAATTTGTTCTTATATGGTAACAGATGCGTTCCGAGTGAATTTGGATTGTAACTTATTTTTGAATCTTTTTTTCCTTATTTTTCTCTCTTGATATTTGTCTGATGGTAATGATTTGTTTGCGTCGCCCCTAGTATTGGTGATTAACATAGTGGATTCCTGCCCGATTCATATCTATTTTTTAATAACACAGGTCAACACCCATTAATCTGCATCTATGTCCAAACAGGCATATTACTAATCTTATAAATTCAATAGGCATGTAACTGAACTAAAACTACATGACCCTGTTTTTTTTTTTTTTTGATTGTACATGACCCTGTTTTTTGAATTTTTATTTGGCTTCAGAAATTTTGAATTTAAGCCCTGCAAATCTGTTCGCTGAAAATTGAATAGAGCATAGAATCAAGTATCGACAAACGATTTGGTTTAACTATTAAGTTTTAGCTATTTTGACTTAAATATGTAATACAAGTATTCTTTAATTTCAACTTTGTTCCTAATCACTTGAAAAAGTGAAGTTCCATGAGGACGGTTCACCTTCTTCTAAACTTTGTTGTTCTTATATATCAGATAACAATCTTGGCTGCTGCCGAAGGAGAACATAAACTTCCTAGCATCAATGGAAGTGGAAACTTGAAGGAAGCTTTACAAAAACTTGGATCCATTCCTTCGAGCAAATTATTAGTAAGATCAATAATAGTTTGCAAGTCATTTTCGGATGTTGTTAGTACCTTTTTTTTACACGATTTTTCTATAATTACTTGCAGGCAGTTGAGGTGTTATGGACCCCACAAAATGAAAATGATACTCTCTCGGAACGGGAGTTACTTGAAGATTACCCACTTTTGCGGCCTTTGTAA

Protein sequence

>MS.gene050507.t1

MGGRSSSSSSSSSRSYSVPSPSPGFSYSAPYYGPSPFSGGVYFGPAVGVGVGAGSSLFLILAGFAAFVLVSGFLSDRDEGSVLTAAGKTTVLKLQVGLLGMGRSLQRDLNRIAEVADTSSPEGLSYILTETSLALLRHPDYCISGYSSVDIKRGIEEGEKHFNQLSIEERGKFDEETLVNVNNIKRQSTRSQRSNGFSNEYIVITILAAAEGEHKLPSINGSGNLKEALQKLGSIPSSKLLAVEVLWTPQNENDTLSERELLEDYPLLRPL