Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050507.t1 | XP_003626400.1 | 97.7 | 218 | 4 | 1 | 55 | 271 | 173 | 390 | 1.80E-109 | 405.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050507.t1 | G7L0U7 | 97.7 | 218 | 4 | 1 | 55 | 271 | 173 | 390 | 1.3e-109 | 405.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050507 | MS.gene050538 | 0.809492 | 1.84E-50 | -1.69E-46 |
MS.gene050507 | MS.gene050577 | 0.80591 | 1.06E-49 | -1.69E-46 |
MS.gene050507 | MS.gene050781 | 0.801147 | 1.03E-48 | -1.69E-46 |
MS.gene050507 | MS.gene050812 | 0.819923 | 9.00E-53 | -1.69E-46 |
MS.gene050507 | MS.gene055539 | 0.807088 | 6.00E-50 | -1.69E-46 |
MS.gene050507 | MS.gene055748 | 0.801437 | 9.01E-49 | -1.69E-46 |
MS.gene050507 | MS.gene056692 | 0.822764 | 1.99E-53 | -1.69E-46 |
MS.gene050507 | MS.gene057332 | 0.81602 | 6.86E-52 | -1.69E-46 |
MS.gene050507 | MS.gene057658 | 0.843097 | 1.73E-58 | -1.69E-46 |
MS.gene050507 | MS.gene058748 | 0.800498 | 1.40E-48 | -1.69E-46 |
MS.gene050507 | MS.gene058838 | 0.823628 | 1.25E-53 | -1.69E-46 |
MS.gene050507 | MS.gene06092 | 0.812027 | 5.21E-51 | -1.69E-46 |
MS.gene050507 | MS.gene061150 | 0.811685 | 6.19E-51 | -1.69E-46 |
MS.gene050507 | MS.gene062332 | 0.831725 | 1.42E-55 | -1.69E-46 |
MS.gene050507 | MS.gene065734 | 0.807023 | 6.19E-50 | -1.69E-46 |
MS.gene050507 | MS.gene066844 | 0.814068 | 1.86E-51 | -1.69E-46 |
MS.gene050507 | MS.gene066845 | 0.830356 | 3.08E-55 | -1.69E-46 |
MS.gene050507 | MS.gene066846 | 0.831289 | 1.82E-55 | -1.69E-46 |
MS.gene050507 | MS.gene066847 | 0.801841 | 7.44E-49 | -1.69E-46 |
MS.gene050507 | MS.gene06688 | 0.834973 | 2.20E-56 | -1.69E-46 |
MS.gene050507 | MS.gene067588 | 0.808869 | 2.51E-50 | -1.69E-46 |
MS.gene050507 | MS.gene068024 | 0.801814 | 7.54E-49 | -1.69E-46 |
MS.gene050507 | MS.gene06869 | 0.804201 | 2.42E-49 | -1.69E-46 |
MS.gene050507 | MS.gene06897 | 0.820582 | 6.36E-53 | -1.69E-46 |
MS.gene050507 | MS.gene07014 | 0.804185 | 2.44E-49 | -1.69E-46 |
MS.gene050507 | MS.gene070194 | 0.800377 | 1.48E-48 | -1.69E-46 |
MS.gene050507 | MS.gene072409 | 0.814297 | 1.66E-51 | -1.69E-46 |
MS.gene050507 | MS.gene072578 | 0.810229 | 1.28E-50 | -1.69E-46 |
MS.gene050507 | MS.gene07301 | 0.812243 | 4.68E-51 | -1.69E-46 |
MS.gene050507 | MS.gene07311 | 0.81072 | 1.00E-50 | -1.69E-46 |
MS.gene050507 | MS.gene07312 | 0.802923 | 4.46E-49 | -1.69E-46 |
MS.gene050507 | MS.gene073927 | 0.856457 | 3.18E-62 | -1.69E-46 |
MS.gene050507 | MS.gene074109 | 0.832044 | 1.18E-55 | -1.69E-46 |
MS.gene050507 | MS.gene08013 | 0.817903 | 2.59E-52 | -1.69E-46 |
MS.gene050507 | MS.gene08158 | 0.823671 | 1.22E-53 | -1.69E-46 |
MS.gene050507 | MS.gene20027 | 0.801518 | 8.67E-49 | -1.69E-46 |
MS.gene050507 | MS.gene20862 | 0.810117 | 1.35E-50 | -1.69E-46 |
MS.gene050507 | MS.gene20910 | 0.81069 | 1.02E-50 | -1.69E-46 |
MS.gene050507 | MS.gene20952 | 0.81387 | 2.06E-51 | -1.69E-46 |
MS.gene050507 | MS.gene21094 | 0.8007 | 1.27E-48 | -1.69E-46 |
MS.gene050507 | MS.gene21238 | 0.804416 | 2.18E-49 | -1.69E-46 |
MS.gene050507 | MS.gene22474 | 0.800998 | 1.11E-48 | -1.69E-46 |
MS.gene050507 | MS.gene23144 | 0.813759 | 2.18E-51 | -1.69E-46 |
MS.gene050507 | MS.gene23183 | 0.82823 | 1.01E-54 | -1.69E-46 |
MS.gene050507 | MS.gene23403 | 0.822725 | 2.03E-53 | -1.69E-46 |
MS.gene050507 | MS.gene27829 | 0.826697 | 2.35E-54 | -1.69E-46 |
MS.gene050507 | MS.gene27920 | 0.815803 | 7.67E-52 | -1.69E-46 |
MS.gene050507 | MS.gene28656 | 0.821294 | 4.36E-53 | -1.69E-46 |
MS.gene050507 | MS.gene28776 | 0.818011 | 2.45E-52 | -1.69E-46 |
MS.gene050507 | MS.gene28996 | 0.810826 | 9.50E-51 | -1.69E-46 |
MS.gene050507 | MS.gene29010 | 0.800702 | 1.27E-48 | -1.69E-46 |
MS.gene050507 | MS.gene30558 | 0.826572 | 2.52E-54 | -1.69E-46 |
MS.gene050507 | MS.gene32051 | 0.802547 | 5.33E-49 | -1.69E-46 |
MS.gene050507 | MS.gene32990 | 0.834231 | 3.38E-56 | -1.69E-46 |
MS.gene050507 | MS.gene33021 | 0.812865 | 3.42E-51 | -1.69E-46 |
MS.gene050507 | MS.gene33972 | 0.803817 | 2.91E-49 | -1.69E-46 |
MS.gene050507 | MS.gene34225 | 0.82832 | 9.60E-55 | -1.69E-46 |
MS.gene050507 | MS.gene35812 | 0.800889 | 1.17E-48 | -1.69E-46 |
MS.gene050507 | MS.gene35814 | 0.835045 | 2.11E-56 | -1.69E-46 |
MS.gene050507 | MS.gene38554 | 0.806243 | 9.04E-50 | -1.69E-46 |
MS.gene050507 | MS.gene38985 | 0.829604 | 4.69E-55 | -1.69E-46 |
MS.gene050507 | MS.gene39991 | 0.805303 | 1.42E-49 | -1.69E-46 |
MS.gene050507 | MS.gene40650 | 0.803152 | 4.00E-49 | -1.69E-46 |
MS.gene050507 | MS.gene41130 | 0.823772 | 1.16E-53 | -1.69E-46 |
MS.gene050507 | MS.gene41649 | 0.813066 | 3.09E-51 | -1.69E-46 |
MS.gene050507 | MS.gene41782 | 0.831103 | 2.02E-55 | -1.69E-46 |
MS.gene050507 | MS.gene43482 | 0.809588 | 1.76E-50 | -1.69E-46 |
MS.gene050507 | MS.gene43489 | 0.829595 | 4.72E-55 | -1.69E-46 |
MS.gene050507 | MS.gene43562 | 0.81225 | 4.66E-51 | -1.69E-46 |
MS.gene050507 | MS.gene44977 | 0.800692 | 1.28E-48 | -1.69E-46 |
MS.gene050507 | MS.gene45606 | 0.804356 | 2.25E-49 | -1.69E-46 |
MS.gene050507 | MS.gene46129 | 0.814728 | 1.33E-51 | -1.69E-46 |
MS.gene050507 | MS.gene46645 | 0.808932 | 2.43E-50 | -1.69E-46 |
MS.gene050507 | MS.gene47877 | 0.809046 | 2.30E-50 | -1.69E-46 |
MS.gene050507 | MS.gene49352 | 0.811321 | 7.42E-51 | -1.69E-46 |
MS.gene050507 | MS.gene49743 | 0.845944 | 2.96E-59 | -1.69E-46 |
MS.gene050507 | MS.gene50826 | 0.801125 | 1.04E-48 | -1.69E-46 |
MS.gene050507 | MS.gene50857 | 0.813064 | 3.09E-51 | -1.69E-46 |
MS.gene050507 | MS.gene52869 | 0.839376 | 1.64E-57 | -1.69E-46 |
MS.gene050507 | MS.gene52883 | 0.813228 | 2.85E-51 | -1.69E-46 |
MS.gene050507 | MS.gene55488 | 0.838553 | 2.69E-57 | -1.69E-46 |
MS.gene050507 | MS.gene58071 | 0.83235 | 9.94E-56 | -1.69E-46 |
MS.gene050507 | MS.gene59101 | 0.804956 | 1.68E-49 | -1.69E-46 |
MS.gene050507 | MS.gene59475 | 0.808769 | 2.63E-50 | -1.69E-46 |
MS.gene050507 | MS.gene60360 | 0.804104 | 2.54E-49 | -1.69E-46 |
MS.gene050507 | MS.gene62955 | 0.803845 | 2.87E-49 | -1.69E-46 |
MS.gene050507 | MS.gene64385 | 0.8127 | 3.72E-51 | -1.69E-46 |
MS.gene050507 | MS.gene69343 | 0.813672 | 2.27E-51 | -1.69E-46 |
MS.gene050507 | MS.gene70143 | 0.814854 | 1.25E-51 | -1.69E-46 |
MS.gene050507 | MS.gene71752 | 0.814406 | 1.57E-51 | -1.69E-46 |
MS.gene050507 | MS.gene72875 | 0.819881 | 9.20E-53 | -1.69E-46 |
MS.gene050507 | MS.gene73381 | 0.800176 | 1.63E-48 | -1.69E-46 |
MS.gene050507 | MS.gene75176 | 0.841062 | 5.97E-58 | -1.69E-46 |
MS.gene050507 | MS.gene75640 | 0.811458 | 6.93E-51 | -1.69E-46 |
MS.gene050507 | MS.gene78161 | 0.816236 | 6.14E-52 | -1.69E-46 |
MS.gene050507 | MS.gene81952 | 0.81399 | 1.93E-51 | -1.69E-46 |
MS.gene050507 | MS.gene83095 | 0.814034 | 1.89E-51 | -1.69E-46 |
MS.gene050507 | MS.gene86306 | 0.829292 | 5.59E-55 | -1.69E-46 |
MS.gene050507 | MS.gene88851 | 0.804722 | 1.88E-49 | -1.69E-46 |
MS.gene050507 | MS.gene89341 | 0.805909 | 1.06E-49 | -1.69E-46 |
MS.gene050507 | MS.gene90221 | 0.804102 | 2.54E-49 | -1.69E-46 |
MS.gene050507 | MS.gene91302 | 0.811726 | 6.06E-51 | -1.69E-46 |
MS.gene050507 | MS.gene92299 | 0.808551 | 2.93E-50 | -1.69E-46 |
MS.gene050507 | MS.gene94547 | 0.80815 | 3.57E-50 | -1.69E-46 |
MS.gene050507 | MS.gene94807 | 0.819576 | 1.08E-52 | -1.69E-46 |
MS.gene050507 | MS.gene95041 | 0.818233 | 2.18E-52 | -1.69E-46 |
MS.gene050507 | MS.gene95047 | 0.818888 | 1.55E-52 | -1.69E-46 |
MS.gene050507 | MS.gene95061 | 0.816519 | 5.30E-52 | -1.69E-46 |
MS.gene050507 | MS.gene95523 | 0.83158 | 1.54E-55 | -1.69E-46 |
MS.gene050507 | MS.gene96549 | 0.814961 | 1.18E-51 | -1.69E-46 |
MS.gene050507 | MS.gene96775 | 0.811175 | 7.99E-51 | -1.69E-46 |
MS.gene050507 | MS.gene97266 | 0.823909 | 1.07E-53 | -1.69E-46 |
MS.gene050507 | MS.gene97422 | 0.804395 | 2.21E-49 | -1.69E-46 |
MS.gene050507 | MS.gene98750 | 0.805854 | 1.09E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050507.t1 | MTR_7g114660 | 96.727 | 275 | 5 | 2 | 1 | 271 | 116 | 390 | 0.0 | 524 |
MS.gene050507.t1 | MTR_8g465010 | 87.611 | 226 | 27 | 1 | 46 | 271 | 161 | 385 | 1.87e-133 | 382 |
MS.gene050507.t1 | MTR_8g031500 | 53.257 | 261 | 56 | 9 | 18 | 271 | 144 | 345 | 1.35e-66 | 211 |
MS.gene050507.t1 | MTR_3g063950 | 46.964 | 247 | 94 | 4 | 52 | 268 | 80 | 319 | 9.54e-62 | 197 |
MS.gene050507.t1 | MTR_3g063940 | 46.311 | 244 | 95 | 5 | 52 | 265 | 84 | 321 | 5.61e-59 | 191 |
MS.gene050507.t1 | MTR_3g063940 | 42.857 | 168 | 89 | 3 | 52 | 218 | 84 | 245 | 1.03e-34 | 126 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050507.t1 | AT1G54520 | 74.409 | 254 | 60 | 3 | 22 | 271 | 139 | 391 | 8.27e-129 | 371 |
Find 78 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTACTCTGCACCGTATTA+TGG | 0.167452 | 7.2:-2829520 | MS.gene050507:CDS |
TTCTTGTAGGTTGGTTTGTT+GGG | 0.272525 | 7.2:-2827396 | MS.gene050507:intron |
TTTACTTTGGACCTGCTGTT+GGG | 0.289346 | 7.2:-2829474 | MS.gene050507:CDS |
CTTACTCTGCACCGTATTAT+GGG | 0.301234 | 7.2:-2829519 | MS.gene050507:CDS |
TGCAGGCAGTTGAGGTGTTA+TGG | 0.316865 | 7.2:-2824426 | MS.gene050507:intron |
CACTTCAAAGGGATCTCAAT+AGG | 0.346195 | 7.2:-2827362 | MS.gene050507:CDS |
ATTAGCTTTGCTTCGGCATC+CGG | 0.346237 | 7.2:-2826887 | MS.gene050507:CDS |
GTAGGTTGGTTTGTTGGGGA+TGG | 0.358522 | 7.2:-2827391 | MS.gene050507:intron |
GTTGGGGTTGGAGTTGGTGC+TGG | 0.371881 | 7.2:-2829457 | MS.gene050507:CDS |
GTTCTTGTAGGTTGGTTTGT+TGG | 0.376176 | 7.2:-2827397 | MS.gene050507:intron |
TCAGTTCCATCACCGAGTCC+TGG | 0.378951 | 7.2:-2829547 | MS.gene050507:CDS |
CCTGCTGTTGGGGTTGGAGT+TGG | 0.379807 | 7.2:-2829463 | MS.gene050507:CDS |
TATATATCAGATAACAATCT+TGG | 0.384768 | 7.2:-2824628 | MS.gene050507:intron |
TGCTAAGATGAGAAATAAAC+TGG | 0.388702 | 7.2:+2829432 | None:intergenic |
ACGAGAAGCCAGAGATCTAA+TGG | 0.389758 | 7.2:-2826211 | MS.gene050507:CDS |
TTTGTAGGTGGACATAAAAC+GGG | 0.392756 | 7.2:-2826338 | MS.gene050507:intron |
GTTTACTTTGGACCTGCTGT+TGG | 0.396536 | 7.2:-2829475 | MS.gene050507:CDS |
GGCCTTCTCCGTTTAGCGGC+GGG | 0.403324 | 7.2:-2829498 | MS.gene050507:CDS |
TGCTGAACCCATTAGATCTC+TGG | 0.409729 | 7.2:+2826203 | None:intergenic |
AATATGTAACTCAAACCTTC+TGG | 0.411911 | 7.2:+2827312 | None:intergenic |
TAGGTTGGTTTGTTGGGGAT+GGG | 0.422903 | 7.2:-2827390 | MS.gene050507:CDS |
AACCACCGTACTCAAGCTTC+AGG | 0.427212 | 7.2:-2829332 | MS.gene050507:intron |
GGTAGTGTTCTTACTGCTGC+TGG | 0.430179 | 7.2:-2829358 | MS.gene050507:CDS |
TTTGGACCTGCTGTTGGGGT+TGG | 0.434596 | 7.2:-2829469 | MS.gene050507:CDS |
AGTTTATTTCTCATCTTAGC+AGG | 0.437254 | 7.2:-2829430 | MS.gene050507:CDS |
TAATAATTTGCTCGAAGGAA+TGG | 0.440166 | 7.2:+2824527 | None:intergenic |
AAGTAAACCCCGCCGCTAAA+CGG | 0.443423 | 7.2:+2829490 | None:intergenic |
CGTCTTCATCTTCGTCGTCT+AGG | 0.449860 | 7.2:-2829576 | MS.gene050507:CDS |
CATCCGGATTACTGTATCTC+GGG | 0.450640 | 7.2:-2826871 | MS.gene050507:CDS |
AGGAAGTTTATGTTCTCCTT+CGG | 0.456217 | 7.2:+2824599 | None:intergenic |
TTTAGCGGCGGGGTTTACTT+TGG | 0.458274 | 7.2:-2829487 | MS.gene050507:CDS |
CATAAACTTCCTAGCATCAA+TGG | 0.460567 | 7.2:-2824588 | MS.gene050507:CDS |
AAATGATACTCTCTCGGAAC+GGG | 0.469991 | 7.2:-2824389 | MS.gene050507:CDS |
CAATGGAAGTGGAAACTTGA+AGG | 0.473142 | 7.2:-2824571 | MS.gene050507:CDS |
AGACGTCATTAGCTTTGCTT+CGG | 0.474800 | 7.2:-2826894 | MS.gene050507:CDS |
GGATGGGTCGTTCACTTCAA+AGG | 0.475754 | 7.2:-2827374 | MS.gene050507:CDS |
CTTCCTAGCATCAATGGAAG+TGG | 0.493075 | 7.2:-2824582 | MS.gene050507:CDS |
CAGTTCCATCACCGAGTCCT+GGG | 0.494367 | 7.2:-2829546 | MS.gene050507:CDS |
TTACTTTGGACCTGCTGTTG+GGG | 0.494918 | 7.2:-2829473 | MS.gene050507:CDS |
ATTTACAAAGGCCGCAAAAG+TGG | 0.500444 | 7.2:+2824349 | None:intergenic |
GGTTTGAGTTACATATTGAC+AGG | 0.505076 | 7.2:-2827306 | MS.gene050507:intron |
AACGGAGAAGGCCCATAATA+CGG | 0.518903 | 7.2:+2829508 | None:intergenic |
TAATTACTTGCAGGCAGTTG+AGG | 0.519740 | 7.2:-2824434 | MS.gene050507:intron |
CGAGAAGCCAGAGATCTAAT+GGG | 0.521062 | 7.2:-2826210 | MS.gene050507:CDS |
GCATCCGGATTACTGTATCT+CGG | 0.526629 | 7.2:-2826872 | MS.gene050507:CDS |
TATGGGCCTTCTCCGTTTAG+CGG | 0.528018 | 7.2:-2829502 | MS.gene050507:CDS |
GAGTAAGAAAACCCAGGACT+CGG | 0.528838 | 7.2:+2829535 | None:intergenic |
TCTTGTAGGTTGGTTTGTTG+GGG | 0.534202 | 7.2:-2827395 | MS.gene050507:intron |
TTTCCACTTCCATTGATGCT+AGG | 0.543766 | 7.2:+2824579 | None:intergenic |
CCAACTCCAACCCCAACAGC+AGG | 0.545304 | 7.2:+2829463 | None:intergenic |
GCCTTCTCCGTTTAGCGGCG+GGG | 0.547880 | 7.2:-2829497 | MS.gene050507:CDS |
AAATGAAAATGATACTCTCT+CGG | 0.552119 | 7.2:-2824395 | MS.gene050507:CDS |
TCAACGTTAACAACATAAAG+AGG | 0.553658 | 7.2:-2826240 | MS.gene050507:CDS |
ATAAAACGGGGTATAGAAGA+AGG | 0.555616 | 7.2:-2826325 | MS.gene050507:CDS |
TTTCTTTCTGATCGTGATGA+GGG | 0.556740 | 7.2:-2829379 | MS.gene050507:CDS |
TACCCCGAGATACAGTAATC+CGG | 0.558063 | 7.2:+2826868 | None:intergenic |
ACCCCGCCGCTAAACGGAGA+AGG | 0.560494 | 7.2:+2829496 | None:intergenic |
GATGGGTCGTTCACTTCAAA+GGG | 0.562374 | 7.2:-2827373 | MS.gene050507:CDS |
ACAATCTTGGCTGCTGCCGA+AGG | 0.564362 | 7.2:-2824615 | MS.gene050507:CDS |
GAAAACCCAGGACTCGGTGA+TGG | 0.571859 | 7.2:+2829541 | None:intergenic |
AATTACCTGAAGCTTGAGTA+CGG | 0.580346 | 7.2:+2829327 | None:intergenic |
TAAAACGGGGTATAGAAGAA+GGG | 0.585010 | 7.2:-2826324 | MS.gene050507:CDS |
CTTACTAATAATTTGCTCGA+AGG | 0.586071 | 7.2:+2824522 | None:intergenic |
CAACTTTCAATTGAAGAGCG+AGG | 0.593938 | 7.2:-2826286 | MS.gene050507:CDS |
GGGCCTTCTCCGTTTAGCGG+CGG | 0.595463 | 7.2:-2829499 | MS.gene050507:CDS |
AAAATGATACTCTCTCGGAA+CGG | 0.598062 | 7.2:-2824390 | MS.gene050507:CDS |
TTTACAAAGGCCGCAAAAGT+GGG | 0.602051 | 7.2:+2824350 | None:intergenic |
AAAATTTGATGAAGAGACGC+TGG | 0.618378 | 7.2:-2826263 | MS.gene050507:CDS |
CTGGAGGTAGAATGGGAGGA+AGG | 0.621787 | 7.2:-2829606 | None:intergenic |
GTTCAGCAATGAATACATAG+TGG | 0.625878 | 7.2:-2826188 | MS.gene050507:intron |
GCAGATACATCATCTCCAGA+AGG | 0.629689 | 7.2:-2827327 | MS.gene050507:CDS |
AAAACGGGGTATAGAAGAAG+GGG | 0.631384 | 7.2:-2826323 | MS.gene050507:CDS |
CATGCCATTACAATTTACAA+AGG | 0.632498 | 7.2:+2824337 | None:intergenic |
GCATCTGGAGGTAGAATGGG+AGG | 0.634245 | 7.2:-2829610 | None:intergenic |
ATCCGGATTACTGTATCTCG+GGG | 0.671601 | 7.2:-2826870 | MS.gene050507:CDS |
TTGTAGGTGGACATAAAACG+GGG | 0.693677 | 7.2:-2826337 | MS.gene050507:intron |
TACCTGAAGCTTGAGTACGG+TGG | 0.724017 | 7.2:+2829330 | None:intergenic |
GGTGCAGAGTAAGAAAACCC+AGG | 0.731550 | 7.2:+2829529 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACTTAAAAAAATAACTT+TGG | - | chr7.2:2827840-2827859 | MS.gene050507:intron | 10.0% |
!! | AAACTTAAAAAAATAACTTT+GGG | - | chr7.2:2827841-2827860 | MS.gene050507:intron | 10.0% |
!! | AAATAAAAATTCAAAAAACA+GGG | + | chr7.2:2829075-2829094 | None:intergenic | 10.0% |
!! | AATCAAAAAAAAAAAAAAAC+AGG | + | chr7.2:2829044-2829063 | None:intergenic | 10.0% |
!! | ATCAAAAAAAAAAAAAAACA+GGG | + | chr7.2:2829043-2829062 | None:intergenic | 10.0% |
!! | ATTAAAAAATAGATATGAAT+CGG | + | chr7.2:2828921-2828940 | None:intergenic | 10.0% |
!! | ATTATTTACATTTCTTAAAT+AGG | - | chr7.2:2826163-2826182 | MS.gene050507:intron | 10.0% |
!! | CATTTCATTAATTAAAATTT+GGG | - | chr7.2:2824988-2825007 | MS.gene050507:intron | 10.0% |
!!! | AGTTTTAAGTATTATTATTT+AGG | + | chr7.2:2827385-2827404 | None:intergenic | 10.0% |
!! | AAAATGATCTATAAAAGATA+TGG | - | chr7.2:2828029-2828048 | MS.gene050507:intron | 15.0% |
!! | AAATCACAAAACAAATATTT+GGG | + | chr7.2:2828395-2828414 | None:intergenic | 15.0% |
!! | AACAAGAAAACAAAAAAAAA+AGG | - | chr7.2:2828271-2828290 | MS.gene050507:intron | 15.0% |
!! | ACAAGAAAACAAAAAAAAAA+GGG | - | chr7.2:2828272-2828291 | MS.gene050507:intron | 15.0% |
!! | ACTAATCTTATAAATTCAAT+AGG | - | chr7.2:2828991-2829010 | MS.gene050507:intron | 15.0% |
!! | AGACATATAAATAATTCATA+AGG | - | chr7.2:2825666-2825685 | MS.gene050507:intron | 15.0% |
!! | ATGATAATCATAATACTTTA+AGG | - | chr7.2:2826726-2826745 | MS.gene050507:intron | 15.0% |
!! | ATTTATGAATAAAAGGTTAT+TGG | - | chr7.2:2826412-2826431 | MS.gene050507:intron | 15.0% |
!! | CAAATAAAAATTCAAAAAAC+AGG | + | chr7.2:2829076-2829095 | None:intergenic | 15.0% |
!! | CAACATTATTTATTTATTAG+AGG | - | chr7.2:2827454-2827473 | MS.gene050507:intron | 15.0% |
!! | CATATAGATTTATGAATAAA+AGG | - | chr7.2:2826405-2826424 | MS.gene050507:intron | 15.0% |
!! | GAAAAAGTTGTTAATATTAT+TGG | - | chr7.2:2824743-2824762 | MS.gene050507:intron | 15.0% |
!! | GCATTTCATTAATTAAAATT+TGG | - | chr7.2:2824987-2825006 | MS.gene050507:intron | 15.0% |
!! | TAAAATAACTAAGTAAAAGT+AGG | - | chr7.2:2826013-2826032 | MS.gene050507:intron | 15.0% |
!! | TAAATCACAAAACAAATATT+TGG | + | chr7.2:2828396-2828415 | None:intergenic | 15.0% |
!! | TTAAAAAATAGATATGAATC+GGG | + | chr7.2:2828920-2828939 | None:intergenic | 15.0% |
!! | TTATACTTACTTTATATTGT+TGG | - | chr7.2:2827520-2827539 | MS.gene050507:intron | 15.0% |
!! | TTATTACAAAATATGCATTT+AGG | + | chr7.2:2825647-2825666 | None:intergenic | 15.0% |
!! | TTTATGAATAAAAGGTTATT+GGG | - | chr7.2:2826413-2826432 | MS.gene050507:intron | 15.0% |
!! | TTTGATTCATTAAAAAATGA+AGG | - | chr7.2:2828360-2828379 | MS.gene050507:intron | 15.0% |
!!! | AATTTTAAAAAATGAAGGTA+CGG | - | chr7.2:2825815-2825834 | MS.gene050507:intron | 15.0% |
!!! | ATTTTGAATAACATAAAGTA+TGG | - | chr7.2:2826203-2826222 | MS.gene050507:CDS | 15.0% |
!!! | CTGTTTTTTGAATTTTTATT+TGG | - | chr7.2:2829074-2829093 | MS.gene050507:intron | 15.0% |
!!! | TACAAATGAATTAGTTATTT+TGG | - | chr7.2:2824808-2824827 | MS.gene050507:intron | 15.0% |
!!! | TATCTATTTTTTAATAACAC+AGG | - | chr7.2:2828926-2828945 | MS.gene050507:intron | 15.0% |
!!! | TGTTTTAATTTGTTCTTATA+TGG | - | chr7.2:2828752-2828771 | MS.gene050507:intron | 15.0% |
!!! | TTTATAGATCATTTTTCTTT+TGG | + | chr7.2:2828024-2828043 | None:intergenic | 15.0% |
!! | AATATCAAGAGAGAAAAATA+AGG | + | chr7.2:2828833-2828852 | None:intergenic | 20.0% |
!! | AATCTTTCAAATAGATCAAT+AGG | - | chr7.2:2825742-2825761 | MS.gene050507:intron | 20.0% |
!! | ACATAATAAAAAATAGTGTG+AGG | - | chr7.2:2825025-2825044 | MS.gene050507:intron | 20.0% |
!! | AGAAAAATCGTGTAAAAAAA+AGG | + | chr7.2:2829491-2829510 | None:intergenic | 20.0% |
!! | GTTGTTAATATTATTGGAAA+TGG | - | chr7.2:2824749-2824768 | MS.gene050507:intron | 20.0% |
!! | TAAAAGATATGGATAATGTT+TGG | - | chr7.2:2828040-2828059 | MS.gene050507:intron | 20.0% |
!! | TACATTTATGATTATGATGA+TGG | + | chr7.2:2824685-2824704 | None:intergenic | 20.0% |
!! | TATATATCAGATAACAATCT+TGG | - | chr7.2:2829318-2829337 | MS.gene050507:intron | 20.0% |
!! | TATATGCCATAACAATTATA+GGG | + | chr7.2:2825118-2825137 | None:intergenic | 20.0% |
!! | TATTCAAAATCCTTATTAAC+AGG | + | chr7.2:2826193-2826212 | None:intergenic | 20.0% |
!! | TTAACATGAATGATCTTATA+TGG | + | chr7.2:2828174-2828193 | None:intergenic | 20.0% |
!! | TTTAGATATTGATGTCAATT+GGG | + | chr7.2:2827984-2828003 | None:intergenic | 20.0% |
!!! | AAAAATCTAGAACATTTATG+TGG | + | chr7.2:2827183-2827202 | None:intergenic | 20.0% |
!!! | AAAGTATTATGATTATCATG+TGG | + | chr7.2:2826725-2826744 | None:intergenic | 20.0% |
!!! | ATGAATTAGTTATTTTGGAA+CGG | - | chr7.2:2824813-2824832 | MS.gene050507:intron | 20.0% |
!!! | ATTTTAAAAAATGAAGGTAC+GGG | - | chr7.2:2825816-2825835 | MS.gene050507:intron | 20.0% |
!!! | ATTTTTCTATAATTACTTGC+AGG | - | chr7.2:2829503-2829522 | MS.gene050507:CDS | 20.0% |
!!! | CTTAGTTATTTTATCGTAAT+TGG | + | chr7.2:2826006-2826025 | None:intergenic | 20.0% |
!!! | GACATACAATTAATCATTTT+AGG | - | chr7.2:2827926-2827945 | MS.gene050507:intron | 20.0% |
!!! | TATTCACTATTTTGAATCTT+TGG | - | chr7.2:2826497-2826516 | MS.gene050507:intron | 20.0% |
!!! | TGCTAAATTGACTTTTTTAA+AGG | - | chr7.2:2826233-2826252 | MS.gene050507:CDS | 20.0% |
!!! | TTATTTTCCAACATTTTTGT+AGG | - | chr7.2:2827593-2827612 | MS.gene050507:intron | 20.0% |
!!! | TTTAGTATTTTGTGTAATGA+AGG | - | chr7.2:2826771-2826790 | MS.gene050507:intron | 20.0% |
! | AAACAACCCTATAATTGTTA+TGG | - | chr7.2:2825109-2825128 | MS.gene050507:intron | 25.0% |
! | AAATGAAAATGATACTCTCT+CGG | - | chr7.2:2829551-2829570 | MS.gene050507:CDS | 25.0% |
! | AACAAAAAAAAAAGGGAACA+AGG | - | chr7.2:2828279-2828298 | MS.gene050507:intron | 25.0% |
! | ATATATCAAGCATATCAACA+AGG | + | chr7.2:2828213-2828232 | None:intergenic | 25.0% |
! | ATTATGATTATCATGTGGTT+AGG | + | chr7.2:2826720-2826739 | None:intergenic | 25.0% |
! | ATTTATTAGAGGTCATCATT+AGG | - | chr7.2:2827465-2827484 | MS.gene050507:intron | 25.0% |
! | CTTTAGATATTGATGTCAAT+TGG | + | chr7.2:2827985-2828004 | None:intergenic | 25.0% |
! | GAAAAGTAAACATAGTCTAA+TGG | + | chr7.2:2825141-2825160 | None:intergenic | 25.0% |
! | GAAACTGAGTTTATAGAAAT+TGG | - | chr7.2:2827556-2827575 | MS.gene050507:intron | 25.0% |
! | GTATATGCCATAACAATTAT+AGG | + | chr7.2:2825119-2825138 | None:intergenic | 25.0% |
! | TAACTAAGTAAAAGTAGGTA+TGG | - | chr7.2:2826018-2826037 | MS.gene050507:intron | 25.0% |
! | TATCAAGGACAAAAAAGAAA+TGG | + | chr7.2:2828547-2828566 | None:intergenic | 25.0% |
! | TATGTTAATCACCAATACTA+GGG | + | chr7.2:2828886-2828905 | None:intergenic | 25.0% |
! | TATTGGAAATGGAAAATAGT+TGG | - | chr7.2:2824760-2824779 | MS.gene050507:intron | 25.0% |
! | TATTGTTGGCATAGAAATAA+AGG | - | chr7.2:2827534-2827553 | MS.gene050507:intron | 25.0% |
! | TTCAAATAGATCAATAGGTA+CGG | - | chr7.2:2825747-2825766 | MS.gene050507:intron | 25.0% |
! | TTTAAGTCTACATTGCATAA+AGG | + | chr7.2:2827823-2827842 | None:intergenic | 25.0% |
! | TTTATTAGAGGTCATCATTA+GGG | - | chr7.2:2827466-2827485 | MS.gene050507:intron | 25.0% |
!! | AAACAACTTTTTGTTCTGTT+TGG | + | chr7.2:2828578-2828597 | None:intergenic | 25.0% |
!! | AGTATCATTTTCATTTTGTG+GGG | + | chr7.2:2829547-2829566 | None:intergenic | 25.0% |
!! | CGTCAAAAGAAAGATAATTT+TGG | - | chr7.2:2825947-2825966 | MS.gene050507:intron | 25.0% |
!! | GAATTTTCTCAAAACCAAAA+AGG | + | chr7.2:2827273-2827292 | None:intergenic | 25.0% |
!! | GAGTATCATTTTCATTTTGT+GGG | + | chr7.2:2829548-2829567 | None:intergenic | 25.0% |
!! | TAAAATTTGGGTTATACAGA+CGG | - | chr7.2:2825000-2825019 | MS.gene050507:intron | 25.0% |
!! | TTTTTATGCAAGCAAAATCA+AGG | - | chr7.2:2824965-2824984 | MS.gene050507:intron | 25.0% |
!!! | AATAGTTTGCAAGTCATTTT+CGG | - | chr7.2:2829453-2829472 | MS.gene050507:CDS | 25.0% |
!!! | AGAGTATCATTTTCATTTTG+TGG | + | chr7.2:2829549-2829568 | None:intergenic | 25.0% |
!!! | AGTTCTATTTTACTGATTGA+TGG | - | chr7.2:2828669-2828688 | MS.gene050507:intron | 25.0% |
!!! | CGGCAAATTTTAAAAAATGA+AGG | - | chr7.2:2825810-2825829 | MS.gene050507:intron | 25.0% |
!!! | CTATATTTTTTGTGCCTTTT+TGG | - | chr7.2:2827256-2827275 | MS.gene050507:intron | 25.0% |
!!! | GTTTTTCTAGTAAATAAGTC+TGG | - | chr7.2:2826265-2826284 | MS.gene050507:CDS | 25.0% |
!!! | TAAAAGAAAAAGTACTGAAG+TGG | - | chr7.2:2827211-2827230 | MS.gene050507:intron | 25.0% |
!!! | TCAGTACTTTTTCTTTTATC+TGG | + | chr7.2:2827209-2827228 | None:intergenic | 25.0% |
AAAAAAAAAGGGAACAAGGA+AGG | - | chr7.2:2828283-2828302 | MS.gene050507:intron | 30.0% | |
AAAAAACTGTTCATTCTCAG+TGG | + | chr7.2:2828112-2828131 | None:intergenic | 30.0% | |
AAACAATGATTGTTCCATTG+AGG | - | chr7.2:2828235-2828254 | MS.gene050507:intron | 30.0% | |
AACAAGATACTGAGAAATCT+TGG | + | chr7.2:2826440-2826459 | None:intergenic | 30.0% | |
AAGGAAGCTTTACAAAAACT+TGG | - | chr7.2:2829394-2829413 | MS.gene050507:CDS | 30.0% | |
AAGGACAAAAAAGAAATGGT+TGG | + | chr7.2:2828543-2828562 | None:intergenic | 30.0% | |
AAGTAAAAGTAGGTATGGTT+CGG | - | chr7.2:2826023-2826042 | MS.gene050507:intron | 30.0% | |
AAGTAGCAATACATGATTTC+AGG | + | chr7.2:2826359-2826378 | None:intergenic | 30.0% | |
AATAGGTTGTCCTGTTAATA+AGG | - | chr7.2:2826180-2826199 | MS.gene050507:intron | 30.0% | |
AATATGTAACTCAAACCTTC+TGG | + | chr7.2:2826637-2826656 | None:intergenic | 30.0% | |
ACTTAAGAAAGAGAATCCTA+GGG | + | chr7.2:2825215-2825234 | None:intergenic | 30.0% | |
AGATTAGTAATATGCCTGTT+TGG | + | chr7.2:2828979-2828998 | None:intergenic | 30.0% | |
AGTTACAATCCAAATTCACT+CGG | + | chr7.2:2828791-2828810 | None:intergenic | 30.0% | |
ATATAAACCTGGATGTTGAA+CGG | + | chr7.2:2827961-2827980 | None:intergenic | 30.0% | |
ATCTATTCCAGCAATACAAT+TGG | + | chr7.2:2827138-2827157 | None:intergenic | 30.0% | |
ATGCATGTAGAAAATGATGA+GGG | - | chr7.2:2826876-2826895 | MS.gene050507:CDS | 30.0% | |
ATGTTAATCACCAATACTAG+GGG | + | chr7.2:2828885-2828904 | None:intergenic | 30.0% | |
CTATGTTAATCACCAATACT+AGG | + | chr7.2:2828887-2828906 | None:intergenic | 30.0% | |
GAACAACAAAGTTTAGAAGA+AGG | + | chr7.2:2829297-2829316 | None:intergenic | 30.0% | |
GGCTTAAATTTCTGAACTAA+AGG | - | chr7.2:2825183-2825202 | MS.gene050507:intron | 30.0% | |
GTGCTTTCAATAAATTGTGT+TGG | - | chr7.2:2825511-2825530 | MS.gene050507:intron | 30.0% | |
TAGTGGTATCATAACTATCT+TGG | - | chr7.2:2827775-2827794 | MS.gene050507:intron | 30.0% | |
TCAAATAGATCAATAGGTAC+GGG | - | chr7.2:2825748-2825767 | MS.gene050507:intron | 30.0% | |
TCAACGTTAACAACATAAAG+AGG | - | chr7.2:2827706-2827725 | MS.gene050507:intron | 30.0% | |
TCAGTAAAATAGAACTACAG+AGG | + | chr7.2:2828665-2828684 | None:intergenic | 30.0% | |
TGACCAAAAATCACATGTTT+AGG | + | chr7.2:2826673-2826692 | None:intergenic | 30.0% | |
TGATGTTGTGTAAACTATTG+TGG | - | chr7.2:2826830-2826849 | MS.gene050507:intron | 30.0% | |
TGCTAAGATGAGAAATAAAC+TGG | + | chr7.2:2824517-2824536 | None:intergenic | 30.0% | |
TGGCTTCGTCATATTTATTT+AGG | - | chr7.2:2825331-2825350 | MS.gene050507:intron | 30.0% | |
TTATATGGCATGTGAAAAAG+TGG | + | chr7.2:2828159-2828178 | None:intergenic | 30.0% | |
! | AATGATAGTGTTGTTCTTGT+AGG | - | chr7.2:2826537-2826556 | MS.gene050507:intron | 30.0% |
! | AGTTTATTTCTCATCTTAGC+AGG | - | chr7.2:2824516-2824535 | MS.gene050507:intron | 30.0% |
! | ATGTGACTTCTTCTTTTAGT+GGG | - | chr7.2:2825243-2825262 | MS.gene050507:intron | 30.0% |
! | CTTTTGACGAAAATAGTAGA+GGG | + | chr7.2:2825936-2825955 | None:intergenic | 30.0% |
! | GTTCCTAAACATGTGATTTT+TGG | - | chr7.2:2826667-2826686 | MS.gene050507:intron | 30.0% |
! | TATGTGACTTCTTCTTTTAG+TGG | - | chr7.2:2825242-2825261 | MS.gene050507:intron | 30.0% |
! | TCTTTTGACGAAAATAGTAG+AGG | + | chr7.2:2825937-2825956 | None:intergenic | 30.0% |
! | TGGAAAATAGTTGGTCATTT+TGG | - | chr7.2:2824769-2824788 | MS.gene050507:intron | 30.0% |
! | TTTTCCAACATTTTTGTAGG+TGG | - | chr7.2:2827596-2827615 | MS.gene050507:intron | 30.0% |
! | TTTTGTAGGTGGACATAAAA+CGG | - | chr7.2:2827607-2827626 | MS.gene050507:intron | 30.0% |
!! | AGTATTGGTGATTAACATAG+TGG | - | chr7.2:2828887-2828906 | MS.gene050507:intron | 30.0% |
!! | CTTACTAATAATTTGCTCGA+AGG | + | chr7.2:2829427-2829446 | None:intergenic | 30.0% |
!! | GGAAAATAGTTGGTCATTTT+GGG | - | chr7.2:2824770-2824789 | MS.gene050507:intron | 30.0% |
!! | TAATAATTTGCTCGAAGGAA+TGG | + | chr7.2:2829422-2829441 | None:intergenic | 30.0% |
!! | TCACTATTTTGAATCTTTGG+TGG | - | chr7.2:2826500-2826519 | MS.gene050507:intron | 30.0% |
!!! | AATTAGTTATTTTGGAACGG+AGG | - | chr7.2:2824816-2824835 | MS.gene050507:intron | 30.0% |
!!! | ACTGAGAATGAACAGTTTTT+TGG | - | chr7.2:2828111-2828130 | MS.gene050507:intron | 30.0% |
!!! | ATTAGTTATTTTGGAACGGA+GGG | - | chr7.2:2824817-2824836 | MS.gene050507:intron | 30.0% |
!!! | ATTATAGGGTTGTTTTTTCC+AGG | + | chr7.2:2825104-2825123 | None:intergenic | 30.0% |
!!! | CTGAGAATGAACAGTTTTTT+GGG | - | chr7.2:2828112-2828131 | MS.gene050507:intron | 30.0% |
!!! | CTTCACTTTTTCAAGTGATT+AGG | + | chr7.2:2829256-2829275 | None:intergenic | 30.0% |
AAAATAGATATGAATCGGGC+AGG | + | chr7.2:2828916-2828935 | None:intergenic | 35.0% | |
AAAATGATACTCTCTCGGAA+CGG | - | chr7.2:2829556-2829575 | MS.gene050507:CDS | 35.0% | |
AAAATTTGATGAAGAGACGC+TGG | - | chr7.2:2827683-2827702 | MS.gene050507:intron | 35.0% | |
AAATTTGCCGTATTACGTAC+CGG | + | chr7.2:2825800-2825819 | None:intergenic | 35.0% | |
AACAAGGAAGGAAAGCAATA+TGG | - | chr7.2:2828295-2828314 | MS.gene050507:intron | 35.0% | |
AATTACCTGAAGCTTGAGTA+CGG | + | chr7.2:2824622-2824641 | None:intergenic | 35.0% | |
ACTATTTCCACCCTTAACTT+CGG | + | chr7.2:2825550-2825569 | None:intergenic | 35.0% | |
AGGAAGTTTATGTTCTCCTT+CGG | + | chr7.2:2829350-2829369 | None:intergenic | 35.0% | |
AGGTAAGGATGAAATAAGTC+AGG | + | chr7.2:2826339-2826358 | None:intergenic | 35.0% | |
ATAAAACGGGGTATAGAAGA+AGG | - | chr7.2:2827621-2827640 | MS.gene050507:intron | 35.0% | |
ATAGCCTCAACTCAATATGT+AGG | - | chr7.2:2825707-2825726 | MS.gene050507:intron | 35.0% | |
ATGTCCACCTACAAAAATGT+TGG | + | chr7.2:2827603-2827622 | None:intergenic | 35.0% | |
CAACACAAAAACATGAAGCA+TGG | + | chr7.2:2824887-2824906 | None:intergenic | 35.0% | |
CACTTAAGAAAGAGAATCCT+AGG | + | chr7.2:2825216-2825235 | None:intergenic | 35.0% | |
CATAAACTTCCTAGCATCAA+TGG | - | chr7.2:2829358-2829377 | MS.gene050507:CDS | 35.0% | |
CTCTCTTGATATTTGTCTGA+TGG | - | chr7.2:2828840-2828859 | MS.gene050507:intron | 35.0% | |
GATGCATGTAGAAAATGATG+AGG | - | chr7.2:2826875-2826894 | MS.gene050507:CDS | 35.0% | |
GCAAGGAATAAAGAAAACAC+TGG | + | chr7.2:2824852-2824871 | None:intergenic | 35.0% | |
GGACATAGATGCAGATTAAT+GGG | + | chr7.2:2828958-2828977 | None:intergenic | 35.0% | |
GTCAATATTGCATACAACGA+TGG | - | chr7.2:2825162-2825181 | MS.gene050507:intron | 35.0% | |
GTTCAGCAATGAATACATAG+TGG | - | chr7.2:2827758-2827777 | MS.gene050507:intron | 35.0% | |
TAAAACGGGGTATAGAAGAA+GGG | - | chr7.2:2827622-2827641 | MS.gene050507:intron | 35.0% | |
TACCATTCCAATTGTATTGC+TGG | - | chr7.2:2827128-2827147 | MS.gene050507:intron | 35.0% | |
TACTACTTTGTCTTCCTCAA+TGG | + | chr7.2:2828252-2828271 | None:intergenic | 35.0% | |
TGAAAAAGTGAAGTTCCATG+AGG | - | chr7.2:2829263-2829282 | MS.gene050507:intron | 35.0% | |
TGAGTCTGATTACATTTGTC+TGG | - | chr7.2:2828703-2828722 | MS.gene050507:intron | 35.0% | |
TGGACATAGATGCAGATTAA+TGG | + | chr7.2:2828959-2828978 | None:intergenic | 35.0% | |
TGTCAATTGGGATATAAACC+TGG | + | chr7.2:2827972-2827991 | None:intergenic | 35.0% | |
TGTTTGGTAGAGGATTATCA+AGG | + | chr7.2:2828562-2828581 | None:intergenic | 35.0% | |
TTCCAGCAATACAATTGGAA+TGG | + | chr7.2:2827133-2827152 | None:intergenic | 35.0% | |
TTTCTTTCTGATCGTGATGA+GGG | - | chr7.2:2824567-2824586 | MS.gene050507:CDS | 35.0% | |
TTTGTAGGTGGACATAAAAC+GGG | - | chr7.2:2827608-2827627 | MS.gene050507:intron | 35.0% | |
! | AAATAAGTCTGGCTTAGCTT+TGG | - | chr7.2:2826276-2826295 | MS.gene050507:CDS | 35.0% |
! | ATAGTGTTGTTCTTGTAGGT+TGG | - | chr7.2:2826541-2826560 | MS.gene050507:intron | 35.0% |
! | CTTTTTGTTCTGTTTGGTAG+AGG | + | chr7.2:2828572-2828591 | None:intergenic | 35.0% |
! | GACTTTTGAATGTTGTGTTG+CGG | + | chr7.2:2828511-2828530 | None:intergenic | 35.0% |
! | GCAATACATGATTTCAGGTA+AGG | + | chr7.2:2826354-2826373 | None:intergenic | 35.0% |
! | GGTTTGAGTTACATATTGAC+AGG | - | chr7.2:2826640-2826659 | MS.gene050507:intron | 35.0% |
! | GTGTTGCTCTTCAGAAAATT+AGG | - | chr7.2:2828332-2828351 | MS.gene050507:intron | 35.0% |
! | TCTTTTAGTGGGATTTACGT+TGG | - | chr7.2:2825254-2825273 | MS.gene050507:intron | 35.0% |
! | TTAGCCTACATATTGAGTTG+AGG | + | chr7.2:2825714-2825733 | None:intergenic | 35.0% |
! | TTTTCTTTCTGATCGTGATG+AGG | - | chr7.2:2824566-2824585 | MS.gene050507:CDS | 35.0% |
! | TTTTGCTTAGCCGAAGTTAA+GGG | - | chr7.2:2825537-2825556 | MS.gene050507:intron | 35.0% |
! | TTTTTGCTTAGCCGAAGTTA+AGG | - | chr7.2:2825536-2825555 | MS.gene050507:intron | 35.0% |
!! | ATCATATACTCTCTGAAGCA+TGG | + | chr7.2:2826109-2826128 | None:intergenic | 35.0% |
!! | CATGCTTCATGTTTTTGTGT+TGG | - | chr7.2:2824885-2824904 | MS.gene050507:intron | 35.0% |
!! | TCAAGTATCGACAAACGATT+TGG | - | chr7.2:2829160-2829179 | MS.gene050507:intron | 35.0% |
!! | TCATATACTCTCTGAAGCAT+GGG | + | chr7.2:2826108-2826127 | None:intergenic | 35.0% |
!! | TTCTTGTAGGTTGGTTTGTT+GGG | - | chr7.2:2826550-2826569 | MS.gene050507:intron | 35.0% |
!! | TTGAAGATTACCCACTTTTG+CGG | - | chr7.2:2829586-2829605 | MS.gene050507:CDS | 35.0% |
AAAACGGGGTATAGAAGAAG+GGG | - | chr7.2:2827623-2827642 | MS.gene050507:intron | 40.0% | |
AAAGTGAAGTTCCATGAGGA+CGG | - | chr7.2:2829267-2829286 | MS.gene050507:intron | 40.0% | |
AAATATGACGAAGCCAACTG+AGG | + | chr7.2:2825327-2825346 | None:intergenic | 40.0% | |
AAATGATACTCTCTCGGAAC+GGG | - | chr7.2:2829557-2829576 | MS.gene050507:CDS | 40.0% | |
AACTGAGGTGAGAAAGAAAC+TGG | + | chr7.2:2825312-2825331 | None:intergenic | 40.0% | |
AGCACAAGTTAACCTGTTCT+AGG | - | chr7.2:2827893-2827912 | MS.gene050507:intron | 40.0% | |
AGTGTGAGGAGAATACGATA+GGG | - | chr7.2:2825039-2825058 | MS.gene050507:intron | 40.0% | |
AGTTTCTTTCTCACCTCAGT+TGG | - | chr7.2:2825311-2825330 | MS.gene050507:intron | 40.0% | |
ATCTGCATCTATGTCCAAAC+AGG | - | chr7.2:2828962-2828981 | MS.gene050507:intron | 40.0% | |
ATTTACGTTGGTCCTGCTTT+AGG | - | chr7.2:2825266-2825285 | MS.gene050507:intron | 40.0% | |
CAACTTTCAATTGAAGAGCG+AGG | - | chr7.2:2827660-2827679 | MS.gene050507:intron | 40.0% | |
CAATGGAAGTGGAAACTTGA+AGG | - | chr7.2:2829375-2829394 | MS.gene050507:CDS | 40.0% | |
CACTTCAAAGGGATCTCAAT+AGG | - | chr7.2:2826584-2826603 | MS.gene050507:intron | 40.0% | |
CATGGCAAATACAAGAAGCA+AGG | + | chr7.2:2824869-2824888 | None:intergenic | 40.0% | |
CATTCTCAGTGGAATGCATT+AGG | + | chr7.2:2828101-2828120 | None:intergenic | 40.0% | |
CTTACTCTGCACCGTATTAT+GGG | - | chr7.2:2824427-2824446 | MS.gene050507:intron | 40.0% | |
CTTCTAAGTTTCTTCCAGGT+TGG | - | chr7.2:2825354-2825373 | MS.gene050507:intron | 40.0% | |
GTACATTATTCACACCAACC+TGG | + | chr7.2:2825371-2825390 | None:intergenic | 40.0% | |
GTTAAGGGTGGAAATAGTCT+AGG | - | chr7.2:2825552-2825571 | MS.gene050507:intron | 40.0% | |
TAAGTCAGGCAATCCAACAA+AGG | + | chr7.2:2826325-2826344 | None:intergenic | 40.0% | |
TAATTACTTGCAGGCAGTTG+AGG | - | chr7.2:2829512-2829531 | MS.gene050507:CDS | 40.0% | |
TAGATCAATAGGTACGGGTA+CGG | - | chr7.2:2825753-2825772 | MS.gene050507:intron | 40.0% | |
TAGGCTTCTAAGTTTCTTCC+AGG | - | chr7.2:2825350-2825369 | MS.gene050507:intron | 40.0% | |
TAGTGTGAGGAGAATACGAT+AGG | - | chr7.2:2825038-2825057 | MS.gene050507:intron | 40.0% | |
TCTTACTCTGCACCGTATTA+TGG | - | chr7.2:2824426-2824445 | MS.gene050507:intron | 40.0% | |
TGAAAAAGTGGCTAGTGGAA+AGG | + | chr7.2:2828147-2828166 | None:intergenic | 40.0% | |
TTGTAGGTGGACATAAAACG+GGG | - | chr7.2:2827609-2827628 | MS.gene050507:intron | 40.0% | |
TTTACGTTGGTCCTGCTTTA+GGG | - | chr7.2:2825267-2825286 | MS.gene050507:intron | 40.0% | |
TTTACTTTGGACCTGCTGTT+GGG | - | chr7.2:2824472-2824491 | MS.gene050507:intron | 40.0% | |
TTTCAGCGAACAGATTTGCA+GGG | + | chr7.2:2829122-2829141 | None:intergenic | 40.0% | |
TTTCCACTTCCATTGATGCT+AGG | + | chr7.2:2829370-2829389 | None:intergenic | 40.0% | |
! | TCTAGTTTCATGCCTAGAAC+AGG | + | chr7.2:2827908-2827927 | None:intergenic | 40.0% |
! | TTTTCAGCGAACAGATTTGC+AGG | + | chr7.2:2829123-2829142 | None:intergenic | 40.0% |
!! | AGACGTCATTAGCTTTGCTT+CGG | - | chr7.2:2827052-2827071 | MS.gene050507:intron | 40.0% |
!! | ATTGGTGCCGCAAAAATGTA+CGG | + | chr7.2:2825988-2826007 | None:intergenic | 40.0% |
!! | GTTCTTGTAGGTTGGTTTGT+TGG | - | chr7.2:2826549-2826568 | MS.gene050507:intron | 40.0% |
!! | TCTTGTAGGTTGGTTTGTTG+GGG | - | chr7.2:2826551-2826570 | MS.gene050507:intron | 40.0% |
!!! | AGGTTTCGCTGCTTTTGTTT+TGG | - | chr7.2:2824536-2824555 | MS.gene050507:CDS | 40.0% |
!!! | GCTGCTTTTGTTTTGGTTTC+TGG | - | chr7.2:2824543-2824562 | MS.gene050507:CDS | 40.0% |
AAAAGTGGCTAGTGGAAAGG+TGG | + | chr7.2:2828144-2828163 | None:intergenic | 45.0% | |
AACGGAGAAGGCCCATAATA+CGG | + | chr7.2:2824441-2824460 | None:intergenic | 45.0% | |
AACTCAGGTCTACCAAATCC+CGG | + | chr7.2:2825582-2825601 | None:intergenic | 45.0% | |
AAGAGCAACACAGATGAGAG+AGG | + | chr7.2:2828323-2828342 | None:intergenic | 45.0% | |
AAGCATGGGTACTCCAAACA+CGG | + | chr7.2:2826094-2826113 | None:intergenic | 45.0% | |
AATGACGTCTCTGCAACAGA+AGG | + | chr7.2:2827042-2827061 | None:intergenic | 45.0% | |
ACGAGAAGCCAGAGATCTAA+TGG | - | chr7.2:2827735-2827754 | MS.gene050507:intron | 45.0% | |
ACTAGGCTAAGGACCTTTGT+TGG | - | chr7.2:2826309-2826328 | MS.gene050507:CDS | 45.0% | |
AGATGCGTTCCGAGTGAATT+TGG | - | chr7.2:2828779-2828798 | MS.gene050507:intron | 45.0% | |
AGCTTAAGGCTTGAGTTTGG+TGG | - | chr7.2:2825616-2825635 | MS.gene050507:intron | 45.0% | |
AGGGTGGAAATAGTCTAGGT+TGG | - | chr7.2:2825556-2825575 | MS.gene050507:intron | 45.0% | |
ATATGCATGGTGGCTCTCAA+TGG | + | chr7.2:2825400-2825419 | None:intergenic | 45.0% | |
ATCCGGATTACTGTATCTCG+GGG | - | chr7.2:2827076-2827095 | MS.gene050507:intron | 45.0% | |
CATCCGGATTACTGTATCTC+GGG | - | chr7.2:2827075-2827094 | MS.gene050507:intron | 45.0% | |
CCATAAGCGAAGCATATGCA+TGG | + | chr7.2:2825413-2825432 | None:intergenic | 45.0% | |
CCATGCATATGCTTCGCTTA+TGG | - | chr7.2:2825410-2825429 | MS.gene050507:intron | 45.0% | |
CGAGAAGCCAGAGATCTAAT+GGG | - | chr7.2:2827736-2827755 | MS.gene050507:intron | 45.0% | |
CTGGAATAGATGACGTCTTG+TGG | - | chr7.2:2827147-2827166 | MS.gene050507:intron | 45.0% | |
CTTCCTAGCATCAATGGAAG+TGG | - | chr7.2:2829364-2829383 | MS.gene050507:CDS | 45.0% | |
GAACTAAAGGCTAATGCCCT+AGG | - | chr7.2:2825196-2825215 | MS.gene050507:intron | 45.0% | |
GAGTAAGAAAACCCAGGACT+CGG | + | chr7.2:2824414-2824433 | None:intergenic | 45.0% | |
GATGGGTCGTTCACTTCAAA+GGG | - | chr7.2:2826573-2826592 | MS.gene050507:intron | 45.0% | |
GCAAGCTTAAGGCTTGAGTT+TGG | - | chr7.2:2825613-2825632 | MS.gene050507:intron | 45.0% | |
GCAGATACATCATCTCCAGA+AGG | - | chr7.2:2826619-2826638 | MS.gene050507:intron | 45.0% | |
GCATCCGGATTACTGTATCT+CGG | - | chr7.2:2827074-2827093 | MS.gene050507:intron | 45.0% | |
GCATGTGAAAAAGTGGCTAG+TGG | + | chr7.2:2828152-2828171 | None:intergenic | 45.0% | |
GTTTACTTTGGACCTGCTGT+TGG | - | chr7.2:2824471-2824490 | MS.gene050507:intron | 45.0% | |
TAAGCGAAGCATATGCATGG+TGG | + | chr7.2:2825410-2825429 | None:intergenic | 45.0% | |
TAATGTAGCTGAAAGCTGCG+TGG | - | chr7.2:2826985-2827004 | MS.gene050507:intron | 45.0% | |
TACCCCGAGATACAGTAATC+CGG | + | chr7.2:2827081-2827100 | None:intergenic | 45.0% | |
TGCTGAACCCATTAGATCTC+TGG | + | chr7.2:2827746-2827765 | None:intergenic | 45.0% | |
TTACTTTGGACCTGCTGTTG+GGG | - | chr7.2:2824473-2824492 | MS.gene050507:intron | 45.0% | |
! | AAATGAAGGTACGGGTACGT+TGG | - | chr7.2:2825824-2825843 | MS.gene050507:intron | 45.0% |
! | GGTAGACCTGAGTTTGTTCA+GGG | - | chr7.2:2825588-2825607 | MS.gene050507:intron | 45.0% |
! | GTTTGAGGTAGACTAGGCTA+AGG | - | chr7.2:2826298-2826317 | MS.gene050507:CDS | 45.0% |
! | TCAACGCCCGTACATTTTTG+CGG | - | chr7.2:2825978-2825997 | MS.gene050507:intron | 45.0% |
! | TGGAAATAGTCTAGGTTGGC+CGG | - | chr7.2:2825560-2825579 | MS.gene050507:intron | 45.0% |
! | TGGTAGACCTGAGTTTGTTC+AGG | - | chr7.2:2825587-2825606 | MS.gene050507:intron | 45.0% |
!! | ACTGGTACCGGTACGTAATA+CGG | - | chr7.2:2825790-2825809 | MS.gene050507:intron | 45.0% |
!! | ATTAGCTTTGCTTCGGCATC+CGG | - | chr7.2:2827059-2827078 | MS.gene050507:intron | 45.0% |
!! | GCAAGAGCACTGCTATTTGT+TGG | - | chr7.2:2825075-2825094 | MS.gene050507:intron | 45.0% |
!! | GCTTTGGTTTGAGGTAGACT+AGG | - | chr7.2:2826292-2826311 | MS.gene050507:CDS | 45.0% |
!! | TAGGTTGGTTTGTTGGGGAT+GGG | - | chr7.2:2826556-2826575 | MS.gene050507:intron | 45.0% |
!! | TCTGGCTTAGCTTTGGTTTG+AGG | - | chr7.2:2826283-2826302 | MS.gene050507:CDS | 45.0% |
!! | TTGGTGCCGCAAAAATGTAC+GGG | + | chr7.2:2825987-2826006 | None:intergenic | 45.0% |
AACCACCGTACTCAAGCTTC+AGG | - | chr7.2:2824614-2824633 | MS.gene050507:CDS | 50.0% | |
AAGAAGGTGAACCGTCCTCA+TGG | + | chr7.2:2829281-2829300 | None:intergenic | 50.0% | |
AAGTAAACCCCGCCGCTAAA+CGG | + | chr7.2:2824459-2824478 | None:intergenic | 50.0% | |
CCTCTTACCGTTCAACATCC+AGG | - | chr7.2:2827951-2827970 | MS.gene050507:intron | 50.0% | |
CCTGGATGTTGAACGGTAAG+AGG | + | chr7.2:2827954-2827973 | None:intergenic | 50.0% | |
CGTCTTCATCTTCGTCGTCT+AGG | - | chr7.2:2824370-2824389 | MS.gene050507:CDS | 50.0% | |
CTCAGTGGAATGCATTAGGC+TGG | + | chr7.2:2828097-2828116 | None:intergenic | 50.0% | |
GACAGTCATGTGTAGTGCAG+TGG | + | chr7.2:2826468-2826487 | None:intergenic | 50.0% | |
GGATGGGTCGTTCACTTCAA+AGG | - | chr7.2:2826572-2826591 | MS.gene050507:intron | 50.0% | |
GGTAGTGTTCTTACTGCTGC+TGG | - | chr7.2:2824588-2824607 | MS.gene050507:CDS | 50.0% | |
GGTGCAGAGTAAGAAAACCC+AGG | + | chr7.2:2824420-2824439 | None:intergenic | 50.0% | |
TACCGGTACTTCTCCGTGTT+TGG | - | chr7.2:2826078-2826097 | MS.gene050507:intron | 50.0% | |
TACCTGAAGCTTGAGTACGG+TGG | + | chr7.2:2824619-2824638 | None:intergenic | 50.0% | |
TATGGGCCTTCTCCGTTTAG+CGG | - | chr7.2:2824444-2824463 | MS.gene050507:intron | 50.0% | |
TCCTCACTGAACCCTAAAGC+AGG | + | chr7.2:2825281-2825300 | None:intergenic | 50.0% | |
TGCTTAGCCGAAGTTAAGGG+TGG | - | chr7.2:2825540-2825559 | MS.gene050507:intron | 50.0% | |
TGTTCAGGGTCGCAAGCTTA+AGG | - | chr7.2:2825602-2825621 | MS.gene050507:intron | 50.0% | |
TTGCGACCCTGAACAAACTC+AGG | + | chr7.2:2825597-2825616 | None:intergenic | 50.0% | |
TTTAGCGGCGGGGTTTACTT+TGG | - | chr7.2:2824459-2824478 | MS.gene050507:intron | 50.0% | |
! | ACTGCTATTTGTTGGTCGCC+TGG | - | chr7.2:2825083-2825102 | MS.gene050507:intron | 50.0% |
! | CTCCAAACACGGAGAAGTAC+CGG | + | chr7.2:2826083-2826102 | None:intergenic | 50.0% |
! | GGAAATAGTCTAGGTTGGCC+GGG | - | chr7.2:2825561-2825580 | MS.gene050507:intron | 50.0% |
! | TGCAGGCAGTTGAGGTGTTA+TGG | - | chr7.2:2829520-2829539 | MS.gene050507:CDS | 50.0% |
!! | GTAGGTTGGTTTGTTGGGGA+TGG | - | chr7.2:2826555-2826574 | MS.gene050507:intron | 50.0% |
!! | TCCTGCTTTAGGGTTCAGTG+AGG | - | chr7.2:2825277-2825296 | MS.gene050507:intron | 50.0% |
ACAATCTTGGCTGCTGCCGA+AGG | - | chr7.2:2829331-2829350 | MS.gene050507:intron | 55.0% | |
ACCGGTACCAGTACCCATAC+CGG | + | chr7.2:2825782-2825801 | None:intergenic | 55.0% | |
ACGAGTACCATACGCGTACC+CGG | - | chr7.2:2826055-2826074 | MS.gene050507:intron | 55.0% | |
ATAGGTACGGGTACGGTACC+CGG | - | chr7.2:2825760-2825779 | MS.gene050507:intron | 55.0% | |
CAGTTCCATCACCGAGTCCT+GGG | - | chr7.2:2824400-2824419 | MS.gene050507:CDS | 55.0% | |
GTTTGCGTCGCCCCTAGTAT+TGG | - | chr7.2:2828872-2828891 | MS.gene050507:intron | 55.0% | |
TCAGTTCCATCACCGAGTCC+TGG | - | chr7.2:2824399-2824418 | MS.gene050507:CDS | 55.0% | |
TTTGGACCTGCTGTTGGGGT+TGG | - | chr7.2:2824477-2824496 | MS.gene050507:intron | 55.0% | |
! | AGTCTAGGTTGGCCGGGATT+TGG | - | chr7.2:2825567-2825586 | MS.gene050507:intron | 55.0% |
!! | ACACGGAGAAGTACCGGTAC+CGG | + | chr7.2:2826077-2826096 | None:intergenic | 55.0% |
!! | GAAAACCCAGGACTCGGTGA+TGG | + | chr7.2:2824408-2824427 | None:intergenic | 55.0% |
ACCATACGCGTACCCGGTAC+CGG | - | chr7.2:2826061-2826080 | MS.gene050507:intron | 60.0% | |
ACGGGTACGGTACCCGGTAT+GGG | - | chr7.2:2825766-2825785 | MS.gene050507:intron | 60.0% | |
ACGGTACCCGGTATGGGTAC+TGG | - | chr7.2:2825772-2825791 | MS.gene050507:intron | 60.0% | |
CCAACTCCAACCCCAACAGC+AGG | + | chr7.2:2824486-2824505 | None:intergenic | 60.0% | |
CCGGTACCAGTACCCATACC+GGG | + | chr7.2:2825781-2825800 | None:intergenic | 60.0% | |
CCTGCTGTTGGGGTTGGAGT+TGG | - | chr7.2:2824483-2824502 | MS.gene050507:intron | 60.0% | |
TACGGGTACGGTACCCGGTA+TGG | - | chr7.2:2825765-2825784 | MS.gene050507:intron | 60.0% | |
!! | CACGGAGAAGTACCGGTACC+GGG | + | chr7.2:2826076-2826095 | None:intergenic | 60.0% |
!! | CCCGGTATGGGTACTGGTAC+CGG | - | chr7.2:2825778-2825797 | MS.gene050507:intron | 60.0% |
!! | GTTGGGGTTGGAGTTGGTGC+TGG | - | chr7.2:2824489-2824508 | MS.gene050507:intron | 60.0% |
ACCCCGCCGCTAAACGGAGA+AGG | + | chr7.2:2824453-2824472 | None:intergenic | 65.0% | |
GCCTTCTCCGTTTAGCGGCG+GGG | - | chr7.2:2824449-2824468 | MS.gene050507:intron | 65.0% | |
GGCCTTCTCCGTTTAGCGGC+GGG | - | chr7.2:2824448-2824467 | MS.gene050507:intron | 65.0% | |
GGGCCTTCTCCGTTTAGCGG+CGG | - | chr7.2:2824447-2824466 | MS.gene050507:intron | 65.0% | |
! | ACCGGTACCGGGTACGCGTA+TGG | + | chr7.2:2826065-2826084 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 2824351 | 2829617 | 2824351 | ID=MS.gene050507 |
chr7.2 | mRNA | 2824351 | 2829617 | 2824351 | ID=MS.gene050507.t1;Parent=MS.gene050507 |
chr7.2 | exon | 2829333 | 2829617 | 2829333 | ID=MS.gene050507.t1.exon1;Parent=MS.gene050507.t1 |
chr7.2 | CDS | 2829333 | 2829617 | 2829333 | ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1 |
chr7.2 | exon | 2827307 | 2827409 | 2827307 | ID=MS.gene050507.t1.exon2;Parent=MS.gene050507.t1 |
chr7.2 | CDS | 2827307 | 2827409 | 2827307 | ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1 |
chr7.2 | exon | 2826861 | 2826916 | 2826861 | ID=MS.gene050507.t1.exon3;Parent=MS.gene050507.t1 |
chr7.2 | CDS | 2826861 | 2826916 | 2826861 | ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1 |
chr7.2 | exon | 2826189 | 2826353 | 2826189 | ID=MS.gene050507.t1.exon4;Parent=MS.gene050507.t1 |
chr7.2 | CDS | 2826189 | 2826353 | 2826189 | ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1 |
chr7.2 | exon | 2824527 | 2824640 | 2824527 | ID=MS.gene050507.t1.exon5;Parent=MS.gene050507.t1 |
chr7.2 | CDS | 2824527 | 2824640 | 2824527 | ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1 |
chr7.2 | exon | 2824351 | 2824443 | 2824351 | ID=MS.gene050507.t1.exon6;Parent=MS.gene050507.t1 |
chr7.2 | CDS | 2824351 | 2824443 | 2824351 | ID=cds.MS.gene050507.t1;Parent=MS.gene050507.t1 |
Gene Sequence |
Protein sequence |