AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29169


Find 281 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE



Chromosome Type Strat End Strand Name
chr5.3 gene 22202026 22207779 22202026 ID=MS.gene29169
chr5.3 mRNA 22202026 22207779 22202026 ID=MS.gene29169.t1;Parent=MS.gene29169
chr5.3 exon 22205905 22207779 22205905 ID=MS.gene29169.t1.exon1;Parent=MS.gene29169.t1
chr5.3 CDS 22205905 22207779 22205905 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22205137 22205223 22205137 ID=MS.gene29169.t1.exon2;Parent=MS.gene29169.t1
chr5.3 CDS 22205137 22205223 22205137 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22204410 22205048 22204410 ID=MS.gene29169.t1.exon3;Parent=MS.gene29169.t1
chr5.3 CDS 22204410 22205048 22204410 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22204130 22204294 22204130 ID=MS.gene29169.t1.exon4;Parent=MS.gene29169.t1
chr5.3 CDS 22204130 22204294 22204130 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22203701 22203995 22203701 ID=MS.gene29169.t1.exon5;Parent=MS.gene29169.t1
chr5.3 CDS 22203701 22203995 22203701 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22203373 22203590 22203373 ID=MS.gene29169.t1.exon6;Parent=MS.gene29169.t1
chr5.3 CDS 22203373 22203590 22203373 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22202908 22203213 22202908 ID=MS.gene29169.t1.exon7;Parent=MS.gene29169.t1
chr5.3 CDS 22202908 22203213 22202908 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22202728 22202791 22202728 ID=MS.gene29169.t1.exon8;Parent=MS.gene29169.t1
chr5.3 CDS 22202728 22202791 22202728 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22202225 22202464 22202225 ID=MS.gene29169.t1.exon9;Parent=MS.gene29169.t1
chr5.3 CDS 22202225 22202464 22202225 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
chr5.3 exon 22202026 22202132 22202026 ID=MS.gene29169.t1.exon10;Parent=MS.gene29169.t1
chr5.3 CDS 22202026 22202132 22202026 ID=cds.MS.gene29169.t1;Parent=MS.gene29169.t1
Gene Sequence

>MS.gene29169

ATGGTTTCTGATGTGGTATCCTTTTGTGTTGGTTTGTTCTTCTGTTATGTGGGGTATTGTGTGAAAAATGAGAGTGAAGAAGGTGATAGAACTCTTCAAGAGCATCTTTTGAATGGTGATACACATGGTGGTAATGGTAATGATAATGGTAATGCTTTAGAGTTAAAAGAGACTAAAGGGAGTGACACTGTTACTCCTTTTTCAAATGCTGGAATTTGGAGTCTTCTCACCTTCACTTGGGTGGGTCCACTTATAACATTTGGCAATAAGAAGACCTTAGACCTTGAGGATGTTCCTCAGCTAGATAGTAGAGATAGTGTAGTTGGAGCTTTTCCAATTTTCAGAGACAAACTTGAAGCTGATTGTGGTGCAATCAATAAAGTAACCACACTTAAATTGGTTAAGTCTTTGATAATCTCAGGGTGGAAAGTGATTCTTATCACTGCTTTTCTTGCATTGGTAAACACTCTTTCTACTTATGTTGGTCCTTATCTTATTGATTCTTTTGTTCAATACCTTAATGGAAAAAGGCTATATGAGAATCAAGGCTATGTGTTGGTTTCTGCTTTTTTCTTTGCAAAGCTTGTAGAAAGCTTAACAAATAGGCATCAGTTCTTTAGGTTGCAGCAACTCGGACTTCGAATCCAAGCACTGCTTATGACTTTGATATATAACAAAGCCTTAACACTTTCATCTCAATCAAGGCAGTGTCAGACTTCCGGAGAAATAATCAATTTCATGACCGTTGATGCCGAAAGAGTTGGTAGTTTCAGTTGGTACATGCATGATTTGTGGATAGTAGCTTTGCAAGTTACATTGGCATTGTTGATTTTGTATAAAAACCTTGGACTTGCTTCAGTTGCTGCTTTTGCTACAACCATCATCGTTATGTTGGCAACTCTTCCATCGGGATCACTGCAAGAGAAGTTACAAAATAAGTTGATGGAGTCAAAGGATGCTAGAATGAAGACCACATCTGAAATTTTAAGAAACATGAGGGTCCTCAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAAGTAACTGAGCTCAGAGAGGCCGAACAAGGGTGGCTGAAGAAATTTCTATATACTTCAGCCATGACTACATTTGTCCTTTGGGGTACACCTATACTTTCATCTGTGGTTTCTTTTGGCACTTGTACGCTCTTAGGGATCCCGCTTGAATCAGGGAAGATTCTGTCAGCGCTTGCAACATTCAGGATGCTTCAAAGGCCTATTTATAGTCTTCCAGATGTAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATCGGGTCGTTTCTTCGTCTTGATGACTTGCAGTTTGATGTTGTCGAAAAGCTTCCTCCTGGTAGTTCTGATACTGCAATTGAAGTGGTTGATGGGAATTTTTCTTGTGATTTATCTTCACCTAATCCAACTTTGCAAAACATAAACCTCAAAGTTTTTCATGGCATGAAGGTTGCTGTTTGCGGTACTGTTGGATCGGGCAAGTCTACTTTACTTTCATGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAAGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATTCAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTGAAGACATGGTTAGGGAAAGGTATGAGAAGGTACTTGAAGCGTGTTCCCTGAAGAAGGATCTGGAAATCTTGCCATTTGGTGATCAGACAGTTATAGGCGAGCGTGGAATAAATTTGAGTGGTGGGCAGAAACAGAGAATACAAATTGCTCGTGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTCTGGATGCTCATACAGGATCTGACCTTTTTAAGGTAACTTATTTTATGTGTTTTGTTTATTATGTCAATTTAACCCGGCTATTTTCTCGACTCGATACTTAAATTGAACTCAATAGATACAAATATGTAATGTGTATCTACTTGGACATGCATTCCTTTTTTTTTTTTTTTAAACTCGGTATCCGGCCCAAGGACTGACTAATTCAGGGGACCAATCCCATGGTCCACTAGCGGGGGGACCCATTTAAAGCAGAGCAAACTTCTGGACTAACATGAATTTCATTTTGAATCCCAATTCACTGTGATGAATCCTGATTAATTTAACGAATCACTACCTAAACTTGGTGTAGCTAACCACCTTTTTTTTTGTCTATTTTATATATCCCACCATTTTTCTTATGTCATTTGATCCATGACTTGAATTTTGGAGTCATATATGATATAATTAATATCAGCTTAAAATTTTATTATGTCACTTATTTTTTTACTTAAAAATGACATTTTTTTTTTGCAACATATCTTTATATTTATAATAAGATTCAATTCTCGATTAAGAAAAAATGTCTTCTGATTCAAGATTTGAATCTCGATATGATAACCATGATGCACAACTAATTTTTGGTTTAAGTCTTTTGAAATGTAGTTACTTCCAACAGGGTGACACTTGTATAAGTATTTTAGTCAGTGAAATTGTTTGTTCAAATTGTGTGGCAGGAATGCTTGCTGGGAGTTTTAAGTTCAAAAACAGTTGTTTACGTTACTCATCAAGTCGAGTTCTTACCTACTGCTGACCTTATATTGGTGAGTATTTATTGTTATTCTATTGTCATTAATTTAAAACTGATGGATTTTCTTTTAAAACTGACCTCTTTTTCGGCCCTTGTTATAGGTCATGAAAGATGGAAAAATTACTCAAAGTGGAAAGTATGTCGATCTTCTTAACATTGGAGCCGATTTTATGGAACTTGTTGGTGCACATAGAGAAGCTTTGTCTACACTTGAATCATTGGATAGAGGAAAAGCATCTAATGAAATAATAACATTTGAACAAGAAATAAATATCTCTGGCACTCATGAAGATGCAAACAAAGATGTGCAAAATGGTAAAGCAGATGATATAAGCGAACTAAAAGGCCATCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGATCTCTCGTACCGTTCATATTATTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGCAACTACTGGATGGCTTGGGCAACTCCCATCTCAGAAGATGTGGAGCCACCTGTTGCAGGAAAGACTCTTATTAAAGTCTATGTTAGTTTGGCCATTGGAAGTTCTTTATGTATTCTTGTTAGATCATTGTTACTTGTTACAGTTGGTTATAAGACAGCTACCATACTCTTCAAGAAAATGCACTTATGCATCTTTCGCGCTCCCATGTCATTTTTCGATTCTACTCCAAGTGGACGGATCCTTAATAGAGTATGTCGTACCGCCGTTCTTTCTGTTTCTTGTCAATTATTTTCAATAATTTTAACTTTGGAATACTTTGTCACTTGGCTTTTTTATCGCTTTCTTCCTCTTTGTTGTCTTGCAGGGTTCTACTGACCAAAGTGCAGTGGATATAGACATTCCTGATAAAATTGGCACATTTGCCTTTTCTATGATCCAACTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAAGTTTTCATTGTCTTTGTACCTGTGATAGCAGTCAGCATTCGGTATCAGGTATTATTTGGACCATCATGGCTTTAACATCGCATATTATATACCATTTCCTTTTCTTTCTTTTTTGCAAATTTGACTGCATTCTATAATATTACAAGGTGATGCTTAAAAACTTTGGAACTTGTAATCTGCAGCGTTATTATTTACCATCAGCCCGTGAACTGTCACGTTTAGGTGGAGTATGCAAAGCCCCAATCATTCAGCACTTTGCAGAAACAATTTCCGGCACTTCAACGATTAGAAGCTTTGATAAACAGTCAAGATTTCATGAAACAAATATGAAACTGCTTGATGGGTATTCTCGGCCAAAGTTCAACATTGCTGCTGCTATGGAATGGTTAAGTTTCCGTTTAGATATGTTGTCTCTGATCACCTTTGCCTTTTCTTTGATATTCTTGATATCAATTCCACCTGGAATCATAAATCCAGGTACGTAATTCAAGTCTGGTATCATATATCAATCAAAATTTACCCTACTTGTATAATGAGAAGTTGAGCATAATTGTTTCTCCTTTATGTCATTTTTCTGATTTTTGAAGCCATTGCCGGTCTAGCTGTTACCTATGGTCTAAATTTAAACATCATACAAGCTTGGATGATATTGACTCTTTGCAACTTGGAGAACAAAATTATATCTGTAGAAAGGATACTTCAGTATACAACCATTCCAAGTGAGCCTCCTCTTGTTTTAGAAGAAGAAAATAGGCCAGATCCTTCTTGGCCTGCATATGGCGAGGTTGATATACGGAACTTGCAGGTAGCTGGAATTTTTTCTCCCGGTTGTTGCCTTTTAAATATGTTTTTGGTTCTGTTTTCTTTCATCTCGCGGTCAATTGATTTTTAGAATCCATGCTAAGGTTCTAGATACAACATACTCCATTTCAACATCTGTAATGATTTGTTGTCTGTGATGAAGGTTCGTTATGCTCCACATCTTCCGCTTGTGTTGCGTGGCCTGACATGCACATTTCGTGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGCGGAAAATCAACTCTTATACAAACACTTTTCCGACTCTTTGAACCTACTGCCGGGGAAGTTATCATTGACAACATCAACATTTCTACAATCGGACTGCATGATTTAAGGTCTAAACTAAGCATTATTCCGCAAGATCCAACAATGTTTGAGGGGACAGTGAGAAGTAATCTGGACCCCCTTGAAGAGTACACTGATGAACAAATATGGGAGGTGTGTTTGTGTTTTTTATTTGTTGAAAAAAATGCAATGACTGAGACAGTTAGTTTTGAACAAAATTTTAGACTTGTAATTGTTCTTCAAATACTGATTTAGATTCTTTAAAATAGGCCTTGGATAAGTGTCAACTGGGCGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCTTCAGGTTTGTCTTCTAATTTGGTTGAACATTAATACTCCCCTCCGACATTTTTCTTGGTGGAAACCCTCAGACTTAAATATACGCAAAAAGGCATTTGTTTACTGTCCAAATATAGGCCAAATATAATATGTAGTATTTACTTCCAGATCGAGTATGTAGTAAATTTAGACCAACTGATGTACCTCTTTGCCTATATTTAGTCCATAAAGAATATATAGTTTTACTTTTAAATCTATTGCTCATGTGGAAGTTTTATGCGTTTATAGTTAGTGAAAATGGTGAGAACTGGAGCATGGGTCAGAGGCAGTTAGTTTGCCTAGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTAATTCAGCAAACTCTTAGGCAGCAGTTCACTGACTCTACCGTCATTACCATTGCTCATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTAGTCAAGGTTAGGAAGAAAAACTGTTCTGTATTAAAATTTTGATATATTTTGTTCCTTGTTTTTTTTCTTCTTCTGATTTTTCTTGTATATTGGTGTAGGACTTATTATGGAGTATGACTCCCCAAACACATTGCTAGAGGATAAGTCATCATCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCTAATTTTTGA

Protein sequence

>MS.gene29169.t1

MVSDVVSFCVGLFFCYVGYCVKNESEEGDRTLQEHLLNGDTHGGNGNDNGNALELKETKGSDTVTPFSNAGIWSLLTFTWVGPLITFGNKKTLDLEDVPQLDSRDSVVGAFPIFRDKLEADCGAINKVTTLKLVKSLIISGWKVILITAFLALVNTLSTYVGPYLIDSFVQYLNGKRLYENQGYVLVSAFFFAKLVESLTNRHQFFRLQQLGLRIQALLMTLIYNKALTLSSQSRQCQTSGEIINFMTVDAERVGSFSWYMHDLWIVALQVTLALLILYKNLGLASVAAFATTIIVMLATLPSGSLQEKLQNKLMESKDARMKTTSEILRNMRVLKLQGWEMKFLSKVTELREAEQGWLKKFLYTSAMTTFVLWGTPILSSVVSFGTCTLLGIPLESGKILSALATFRMLQRPIYSLPDVISMIAQTKVSLDRIGSFLRLDDLQFDVVEKLPPGSSDTAIEVVDGNFSCDLSSPNPTLQNINLKVFHGMKVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGEDMVRERYEKVLEACSLKKDLEILPFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSALDAHTGSDLFKECLLGVLSSKTVVYVTHQVEFLPTADLILVMKDGKITQSGKYVDLLNIGADFMELVGAHREALSTLESLDRGKASNEIITFEQEINISGTHEDANKDVQNGKADDISELKGHLVQEEEREKGKVGFSVYWKYITTAYGGSLVPFILLAQILFQALQIGSNYWMAWATPISEDVEPPVAGKTLIKVYVSLAIGSSLCILVRSLLLVTVGYKTATILFKKMHLCIFRAPMSFFDSTPSGRILNRGSTDQSAVDIDIPDKIGTFAFSMIQLLGIIAVMSQVAWQVFIVFVPVIAVSIRYQRYYLPSARELSRLGGVCKAPIIQHFAETISGTSTIRSFDKQSRFHETNMKLLDGYSRPKFNIAAAMEWLSFRLDMLSLITFAFSLIFLISIPPGIINPAIAGLAVTYGLNLNIIQAWMILTLCNLENKIISVERILQYTTIPSEPPLVLEEENRPDPSWPAYGEVDIRNLQVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRLFEPTAGEVIIDNINISTIGLHDLRSKLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRQQFTDSTVITIAHRITSVLDSDMVLLLSQGLIMEYDSPNTLLEDKSSSFAKLVAEYTMRSNSNF