Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29326.t1 | XP_003626302.1 | 98.2 | 382 | 7 | 0 | 6 | 387 | 7 | 388 | 4.40E-202 | 713.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29326.t1 | P46086 | 69.1 | 379 | 109 | 4 | 6 | 383 | 7 | 378 | 2.8e-136 | 486.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29326.t1 | Q2HTL9 | 98.2 | 382 | 7 | 0 | 6 | 387 | 7 | 388 | 3.2e-202 | 713.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050861 | MS.gene29326 | 0.920385 | 1.37E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29326 | MS.gene029829 | PPI |
| MS.gene29326 | MS.gene75011 | PPI |
| MS.gene29326 | MS.gene24606 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29326.t1 | MTR_7g113660 | 98.168 | 382 | 7 | 0 | 6 | 387 | 7 | 388 | 0.0 | 761 |
| MS.gene29326.t1 | MTR_7g113660 | 98.851 | 261 | 3 | 0 | 127 | 387 | 19 | 279 | 0.0 | 524 |
| MS.gene29326.t1 | MTR_2g030260 | 84.444 | 45 | 7 | 0 | 74 | 118 | 9 | 53 | 4.08e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29326.t1 | AT5G27450 | 69.129 | 379 | 109 | 4 | 6 | 383 | 7 | 378 | 0.0 | 518 |
| MS.gene29326.t1 | AT5G27450 | 69.129 | 379 | 109 | 4 | 6 | 383 | 7 | 378 | 0.0 | 518 |
| MS.gene29326.t1 | AT5G27450 | 69.129 | 379 | 109 | 4 | 6 | 383 | 7 | 378 | 0.0 | 518 |
Find 93 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCTTATTCTACTTAT+TGG | 0.098390 | 7.2:-3660297 | None:intergenic |
| AACTTGATTTGGTAAATAAA+TGG | 0.186049 | 7.2:+3660795 | MS.gene29326:CDS |
| CTTCCTTTGGGATCGGGTTT+GGG | 0.252521 | 7.2:+3660665 | MS.gene29326:CDS |
| TCTTCCTTTGGGATCGGGTT+TGG | 0.254236 | 7.2:+3660664 | MS.gene29326:CDS |
| TCAAGGTCTGCTCCAGAGTA+TGG | 0.261284 | 7.2:+3663378 | MS.gene29326:CDS |
| TATTAATTCTGATCTTCCTT+TGG | 0.266647 | 7.2:+3660652 | MS.gene29326:CDS |
| AATATACCTGAGGCTAAAAT+TGG | 0.267259 | 7.2:+3660411 | MS.gene29326:CDS |
| CAACAAGGGTGGCATTCTTT+TGG | 0.277254 | 7.2:+3660764 | MS.gene29326:CDS |
| GCTAAAATTGGACTTGCTTC+TGG | 0.281138 | 7.2:+3660423 | MS.gene29326:CDS |
| ATCGTTGAGACTTGTGTTAA+AGG | 0.299741 | 7.2:+3660251 | MS.gene29326:CDS |
| ATTAATTCTGATCTTCCTTT+GGG | 0.302065 | 7.2:+3660653 | MS.gene29326:CDS |
| CAATGTTTCACTGCCGGAAT+TGG | 0.324178 | 7.2:+3663701 | MS.gene29326:CDS |
| TGGAGAGAAGGAACTTGATT+TGG | 0.330091 | 7.2:+3660784 | MS.gene29326:CDS |
| TGGTTATATTCTTCTATTCA+AGG | 0.336903 | 7.2:+3660462 | MS.gene29326:CDS |
| AGAGAAGGTAGAAGAGCTAA+TGG | 0.345464 | 7.2:+3663348 | MS.gene29326:CDS |
| GATAACAAAGAAACAGATTC+AGG | 0.360230 | 7.2:-3660324 | None:intergenic |
| TCTGATCTTCCTTTGGGATC+GGG | 0.381978 | 7.2:+3660659 | MS.gene29326:CDS |
| TGATAAAGTGATTGCTGAAC+TGG | 0.386649 | 7.2:+3663664 | MS.gene29326:CDS |
| TTCTGATCTTCCTTTGGGAT+CGG | 0.387010 | 7.2:+3660658 | MS.gene29326:CDS |
| ACTTGATTTGGTAAATAAAT+GGG | 0.390031 | 7.2:+3660796 | MS.gene29326:CDS |
| AAGTTGACAGGAGCTGGTGG+TGG | 0.392697 | 7.2:+3663463 | MS.gene29326:CDS |
| AACACAAAAGCCATGGCATC+CGG | 0.399291 | 7.2:-3663241 | None:intergenic |
| CGCGGCATTCTGTGTGGCAC+TGG | 0.408652 | 7.2:+3660694 | MS.gene29326:CDS |
| AACACCATTCCCACCAATTC+CGG | 0.409209 | 7.2:-3663714 | None:intergenic |
| CACTCAACAGAACATGAATT+AGG | 0.425612 | 7.2:-3660354 | None:intergenic |
| ACTAACTGTGTTGTCAATTC+CGG | 0.449491 | 7.2:-3660855 | None:intergenic |
| GCTCATCCGGTGTAGGTGAC+TGG | 0.461654 | 7.2:-3663306 | None:intergenic |
| AACATAATCAGCTTCAAGTC+TGG | 0.462867 | 7.2:+3663103 | MS.gene29326:CDS |
| TTGACAGGAGCTGGTGGTGG+GGG | 0.464564 | 7.2:+3663466 | MS.gene29326:CDS |
| TGTTTCACTGCCGGAATTGG+TGG | 0.467722 | 7.2:+3663704 | MS.gene29326:CDS |
| ATCATTCATGGAAAGCCATC+CGG | 0.472952 | 7.2:+3660836 | MS.gene29326:CDS |
| GAGGTTAAAGCCAGGGCTCC+CGG | 0.477265 | 7.2:+3660005 | MS.gene29326:intron |
| GAATTAATAACCACAGTAGC+AGG | 0.495249 | 7.2:-3660638 | None:intergenic |
| TCTTCTAAGTTGACAGGAGC+TGG | 0.495981 | 7.2:+3663457 | MS.gene29326:CDS |
| TTGCTGAACTGGAGTCAAAC+GGG | 0.497231 | 7.2:+3663675 | MS.gene29326:CDS |
| CAAGGTCTGCTCCAGAGTAT+GGG | 0.502791 | 7.2:+3663379 | MS.gene29326:CDS |
| GGGGAACACGCCGTTGTTCA+CGG | 0.502857 | 7.2:+3660044 | MS.gene29326:CDS |
| GGTTATATTCTTCTATTCAA+GGG | 0.504785 | 7.2:+3660463 | MS.gene29326:CDS |
| AGTTGACAGGAGCTGGTGGT+GGG | 0.505018 | 7.2:+3663464 | MS.gene29326:CDS |
| ATTGCTGAACTGGAGTCAAA+CGG | 0.508713 | 7.2:+3663674 | MS.gene29326:CDS |
| AAACTATCTTCTAAGTTGAC+AGG | 0.511442 | 7.2:+3663451 | MS.gene29326:CDS |
| GAGACTTGTGTTAAAGGATA+CGG | 0.515191 | 7.2:+3660257 | MS.gene29326:CDS |
| TGAGAGAATGCTGAGGCACC+CGG | 0.517407 | 7.2:+3663222 | MS.gene29326:CDS |
| TGTGTTAAAGGATACGGCAT+TGG | 0.519070 | 7.2:+3660263 | MS.gene29326:CDS |
| GTAGTAACAGAGAGCTCATC+CGG | 0.519204 | 7.2:-3663319 | None:intergenic |
| GTGAACAACGGCGTGTTCCC+CGG | 0.523186 | 7.2:-3660042 | None:intergenic |
| GCTGAGGCACCCGGATGCCA+TGG | 0.525360 | 7.2:+3663231 | MS.gene29326:CDS |
| GGGTTCCAATGTTTCACTGC+CGG | 0.531775 | 7.2:+3663695 | MS.gene29326:CDS |
| AACACAAAAGCATTGGTGGC+TGG | 0.533344 | 7.2:+3663193 | MS.gene29326:CDS |
| CAATTCCGGCAGTGAAACAT+TGG | 0.536185 | 7.2:-3663700 | None:intergenic |
| GAGCTAATGGAAATGAATCA+AGG | 0.537369 | 7.2:+3663361 | MS.gene29326:CDS |
| GTTTCTACCTACTCTCGTGT+TGG | 0.538490 | 7.2:-3663173 | None:intergenic |
| GTTGACAGGAGCTGGTGGTG+GGG | 0.540263 | 7.2:+3663465 | MS.gene29326:CDS |
| TAGAAACACAAAAGCATTGG+TGG | 0.548306 | 7.2:+3663189 | MS.gene29326:CDS |
| GACAACACAGTTAGTTCATA+CGG | 0.553562 | 7.2:+3660863 | MS.gene29326:CDS |
| TCGAAGAACAGTTTCTATTG+TGG | 0.554326 | 7.2:-3663413 | None:intergenic |
| GAGAGTACCAGAAGAAGGAG+TGG | 0.555723 | 7.2:-3660123 | None:intergenic |
| TAGATTCAAGCCTGCTACTG+TGG | 0.557032 | 7.2:+3660628 | MS.gene29326:intron |
| AGGGAGAGAGTACCAGAAGA+AGG | 0.558485 | 7.2:-3660128 | None:intergenic |
| AAGGTCTGCTCCAGAGTATG+GGG | 0.559637 | 7.2:+3663380 | MS.gene29326:CDS |
| TGTTACTGATTCTGTTTCTG+TGG | 0.559785 | 7.2:+3660733 | MS.gene29326:CDS |
| ACTGCCGGAATTGGTGGGAA+TGG | 0.562498 | 7.2:+3663710 | MS.gene29326:CDS |
| ATCGGGTTTGGGTTCATCCG+CGG | 0.562556 | 7.2:+3660676 | MS.gene29326:CDS |
| ACACAAAAGCCATGGCATCC+GGG | 0.565975 | 7.2:-3663240 | None:intergenic |
| TGTTACTACGTTAGAAGAGA+AGG | 0.578030 | 7.2:+3663333 | MS.gene29326:CDS |
| GTTTCACTGCCGGAATTGGT+GGG | 0.590532 | 7.2:+3663705 | MS.gene29326:CDS |
| AGGTAGAAACACAAAAGCAT+TGG | 0.593702 | 7.2:+3663186 | MS.gene29326:CDS |
| ATCACTTTATCAACAACTGT+GGG | 0.598264 | 7.2:-3663653 | None:intergenic |
| GGCATTCTGTGTGGCACTGG+CGG | 0.602276 | 7.2:+3660697 | MS.gene29326:CDS |
| AGAATATAACCAAAGAAAAG+CGG | 0.602328 | 7.2:-3660451 | None:intergenic |
| ACAGAGAGCTCATCCGGTGT+AGG | 0.603559 | 7.2:-3663313 | None:intergenic |
| CAGAAGAAGGAGTGGAAAAG+CGG | 0.605331 | 7.2:-3660115 | None:intergenic |
| CGTTCTCCAGTCACCTACAC+CGG | 0.610987 | 7.2:+3663300 | MS.gene29326:CDS |
| CTCATTACCAACACGAGAGT+AGG | 0.619693 | 7.2:+3663166 | MS.gene29326:CDS |
| CTGTGGATGTGATGCAACAA+GGG | 0.621460 | 7.2:+3660750 | MS.gene29326:CDS |
| TCTAAGTTGACAGGAGCTGG+TGG | 0.621573 | 7.2:+3663460 | MS.gene29326:CDS |
| CGGTGTAGGTGACTGGAGAA+CGG | 0.623737 | 7.2:-3663299 | None:intergenic |
| AGCAGTAAACACAAAAGCCA+TGG | 0.628486 | 7.2:-3663248 | None:intergenic |
| GGCGGTTGATCCGTGAACAA+CGG | 0.630354 | 7.2:-3660054 | None:intergenic |
| AATCACTTTATCAACAACTG+TGG | 0.633979 | 7.2:-3663654 | None:intergenic |
| TAAGTCAATAGAAGAAGCAA+CGG | 0.636222 | 7.2:-3660075 | None:intergenic |
| TCAAGTCTGGTAACTTGACA+CGG | 0.638234 | 7.2:+3663116 | MS.gene29326:CDS |
| TCTGTGGATGTGATGCAACA+AGG | 0.639120 | 7.2:+3660749 | MS.gene29326:CDS |
| TTCATCCGCGGCATTCTGTG+TGG | 0.639325 | 7.2:+3660688 | MS.gene29326:CDS |
| ACTGTGTTGTCAATTCCGGA+TGG | 0.645767 | 7.2:-3660851 | None:intergenic |
| GAACCCAAACCCGATCCCAA+AGG | 0.654625 | 7.2:-3660668 | None:intergenic |
| TGAAAACCTTAATATACCTG+AGG | 0.661761 | 7.2:+3660401 | MS.gene29326:CDS |
| GTCAATAGAAGAAGCAACGG+CGG | 0.668901 | 7.2:-3660072 | None:intergenic |
| CAGTGCCACACAGAATGCCG+CGG | 0.676093 | 7.2:-3660693 | None:intergenic |
| GGAAAAGCGGAGAGAAACGT+AGG | 0.687796 | 7.2:-3660102 | None:intergenic |
| GTGTTTCTGAGAGAATGCTG+AGG | 0.704427 | 7.2:+3663215 | MS.gene29326:CDS |
| TGGATGTGATGCAACAAGGG+TGG | 0.717984 | 7.2:+3660753 | MS.gene29326:CDS |
| AGGTCTGCTCCAGAGTATGG+GGG | 0.723783 | 7.2:+3663381 | MS.gene29326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATAATTTTATTTTAT+TGG | - | chr7.2:3662229-3662248 | None:intergenic | 0.0% |
| !! | TTTAGTATTAAATTTATTAG+TGG | - | chr7.2:3661590-3661609 | None:intergenic | 10.0% |
| !!! | GTATTTTTTTTTTAATAGTA+TGG | - | chr7.2:3661615-3661634 | None:intergenic | 10.0% |
| !! | AGGATTTAATTAATTTAACT+GGG | + | chr7.2:3660199-3660218 | MS.gene29326:intron | 15.0% |
| !! | ATTCGTAATATGAAATAAAA+GGG | + | chr7.2:3661672-3661691 | MS.gene29326:intron | 15.0% |
| !! | TATTCGTAATATGAAATAAA+AGG | + | chr7.2:3661671-3661690 | MS.gene29326:intron | 15.0% |
| !!! | AAATAATGATTTTAGTTACT+TGG | - | chr7.2:3661415-3661434 | None:intergenic | 15.0% |
| !!! | ATTTCTGTATTTTTACAAAA+AGG | + | chr7.2:3662023-3662042 | MS.gene29326:intron | 15.0% |
| !!! | TTTCTGTATTTTTACAAAAA+GGG | + | chr7.2:3662024-3662043 | MS.gene29326:intron | 15.0% |
| !!! | TTTTTAACCTAATATCAATT+TGG | + | chr7.2:3662818-3662837 | MS.gene29326:intron | 15.0% |
| !! | CATTAATCATATATCATTAG+AGG | + | chr7.2:3660179-3660198 | MS.gene29326:intron | 20.0% |
| !! | GAGGATTTAATTAATTTAAC+TGG | + | chr7.2:3660198-3660217 | MS.gene29326:intron | 20.0% |
| !! | TAATCAATCATTTCAATCAA+TGG | + | chr7.2:3659983-3660002 | MS.gene29326:intron | 20.0% |
| !! | TCAAGAAACTCAAATTAAAT+TGG | - | chr7.2:3662864-3662883 | None:intergenic | 20.0% |
| !!! | AAAATTTCATCTTCTTTTGT+TGG | + | chr7.2:3660894-3660913 | MS.gene29326:intron | 20.0% |
| !!! | AACTTGATTTGGTAAATAAA+TGG | + | chr7.2:3660795-3660814 | MS.gene29326:CDS | 20.0% |
| !!! | ACTTGATTTGGTAAATAAAT+GGG | + | chr7.2:3660796-3660815 | MS.gene29326:CDS | 20.0% |
| !!! | GAAATTTTGAGTAATGTTTA+AGG | - | chr7.2:3661645-3661664 | None:intergenic | 20.0% |
| !!! | GTTTGAGTTTTTATCAAAAT+CGG | + | chr7.2:3662326-3662345 | MS.gene29326:intron | 20.0% |
| !!! | TTCTGTATTTTTACAAAAAG+GGG | + | chr7.2:3662025-3662044 | MS.gene29326:intron | 20.0% |
| !!! | TTTGAGTTTTTATCAAAATC+GGG | + | chr7.2:3662327-3662346 | MS.gene29326:intron | 20.0% |
| !!! | TTTTCAATAATGACCATTAT+CGG | + | chr7.2:3659903-3659922 | MS.gene29326:intron | 20.0% |
| ! | AGAATAAACACCAAAAAGTT+TGG | + | chr7.2:3662503-3662522 | MS.gene29326:intron | 25.0% |
| ! | AGAATATAACCAAAGAAAAG+CGG | - | chr7.2:3660454-3660473 | None:intergenic | 25.0% |
| ! | AGTAACAGAATCAAAACATA+CGG | - | chr7.2:3660599-3660618 | None:intergenic | 25.0% |
| ! | AGTAGAGGAATTACAATTTA+AGG | + | chr7.2:3662091-3662110 | MS.gene29326:intron | 25.0% |
| ! | ATGATTAATGAGAAGATTAG+AGG | - | chr7.2:3660169-3660188 | None:intergenic | 25.0% |
| ! | ATGTTCCAAATATGTAAATG+TGG | - | chr7.2:3660971-3660990 | None:intergenic | 25.0% |
| ! | ATTAATTCTGATCTTCCTTT+GGG | + | chr7.2:3660653-3660672 | MS.gene29326:CDS | 25.0% |
| ! | GAATAAACACCAAAAAGTTT+GGG | + | chr7.2:3662504-3662523 | MS.gene29326:intron | 25.0% |
| ! | GCATTAGAAACATACATTAA+TGG | - | chr7.2:3662790-3662809 | None:intergenic | 25.0% |
| ! | GGTTATATTCTTCTATTCAA+GGG | + | chr7.2:3660463-3660482 | MS.gene29326:CDS | 25.0% |
| ! | GTAGAGGAATTACAATTTAA+GGG | + | chr7.2:3662092-3662111 | MS.gene29326:intron | 25.0% |
| ! | TAACCTAATATCAATTTGGT+AGG | + | chr7.2:3662822-3662841 | MS.gene29326:intron | 25.0% |
| ! | TATCTCCACATTTACATATT+TGG | + | chr7.2:3660963-3660982 | MS.gene29326:intron | 25.0% |
| ! | TATTAATTCTGATCTTCCTT+TGG | + | chr7.2:3660652-3660671 | MS.gene29326:CDS | 25.0% |
| ! | TGATTAATGAGAAGATTAGA+GGG | - | chr7.2:3660168-3660187 | None:intergenic | 25.0% |
| ! | TGGTTATATTCTTCTATTCA+AGG | + | chr7.2:3660462-3660481 | MS.gene29326:CDS | 25.0% |
| ! | TTGCTATATATGATATATCC+AGG | - | chr7.2:3662604-3662623 | None:intergenic | 25.0% |
| !! | ATTAAGGTTTTCAACTAAAG+CGG | - | chr7.2:3660394-3660413 | None:intergenic | 25.0% |
| !! | ATTACTAATGGTTATTGGTT+TGG | + | chr7.2:3662543-3662562 | MS.gene29326:intron | 25.0% |
| !! | ATTTGGTACAACTTTTGTAA+TGG | + | chr7.2:3661463-3661482 | MS.gene29326:intron | 25.0% |
| !! | GTTATCGTTTTACTATTGAT+AGG | + | chr7.2:3661743-3661762 | MS.gene29326:intron | 25.0% |
| !! | TTCTTTGTTCATGAAGATTT+TGG | - | chr7.2:3661373-3661392 | None:intergenic | 25.0% |
| !! | TTTGGTACAACTTTTGTAAT+GGG | + | chr7.2:3661464-3661483 | MS.gene29326:intron | 25.0% |
| !!! | AACTTTTTGGTGTTTATTCT+AGG | - | chr7.2:3662503-3662522 | None:intergenic | 25.0% |
| !!! | AGTTATTTTAAGTCCATATG+CGG | + | chr7.2:3662285-3662304 | MS.gene29326:intron | 25.0% |
| !!! | ATGTTTCGATTTTGAAATCA+AGG | + | chr7.2:3661973-3661992 | MS.gene29326:intron | 25.0% |
| !!! | TGTACAAATTTTGACTCTTT+TGG | + | chr7.2:3662997-3663016 | MS.gene29326:intron | 25.0% |
| !!! | TGTTTCGATTTTGAAATCAA+GGG | + | chr7.2:3661974-3661993 | MS.gene29326:intron | 25.0% |
| AATATACCTGAGGCTAAAAT+TGG | + | chr7.2:3660411-3660430 | MS.gene29326:CDS | 30.0% | |
| AATCACTTTATCAACAACTG+TGG | - | chr7.2:3663657-3663676 | None:intergenic | 30.0% | |
| ACAAGGAAAAAGAAGCAAAA+AGG | - | chr7.2:3660995-3661014 | None:intergenic | 30.0% | |
| ACCAATAACCATTAGTAATC+TGG | - | chr7.2:3662542-3662561 | None:intergenic | 30.0% | |
| ACTCAATAATTGTCATCATC+AGG | + | chr7.2:3663079-3663098 | MS.gene29326:intron | 30.0% | |
| AGAAAATCATCACTCTAGAT+AGG | + | chr7.2:3661097-3661116 | MS.gene29326:intron | 30.0% | |
| AGTCCTACCAAATTGATATT+AGG | - | chr7.2:3662828-3662847 | None:intergenic | 30.0% | |
| ATCACTTTATCAACAACTGT+GGG | - | chr7.2:3663656-3663675 | None:intergenic | 30.0% | |
| ATTCAATCTGTTGTCAAAAG+CGG | - | chr7.2:3661868-3661887 | None:intergenic | 30.0% | |
| GAAAATCATCACTCTAGATA+GGG | + | chr7.2:3661098-3661117 | MS.gene29326:intron | 30.0% | |
| GATAACAAAGAAACAGATTC+AGG | - | chr7.2:3660327-3660346 | None:intergenic | 30.0% | |
| GATGATGACAATTATTGAGT+GGG | - | chr7.2:3663079-3663098 | None:intergenic | 30.0% | |
| GCTTCTCTTATTCTACTTAT+TGG | - | chr7.2:3660300-3660319 | None:intergenic | 30.0% | |
| TAAGTCAATAGAAGAAGCAA+CGG | - | chr7.2:3660078-3660097 | None:intergenic | 30.0% | |
| TACAACTTGAATCTTCTGTT+AGG | + | chr7.2:3661025-3661044 | MS.gene29326:intron | 30.0% | |
| TCAATCATTTCAATCAATGG+AGG | + | chr7.2:3659986-3660005 | MS.gene29326:intron | 30.0% | |
| TGAAAACCTTAATATACCTG+AGG | + | chr7.2:3660401-3660420 | MS.gene29326:CDS | 30.0% | |
| ! | AAACTATCTTCTAAGTTGAC+AGG | + | chr7.2:3663451-3663470 | MS.gene29326:CDS | 30.0% |
| ! | ATTTGTTAAGATGAAGTACC+TGG | + | chr7.2:3662583-3662602 | MS.gene29326:intron | 30.0% |
| ! | TGAAAACGACATCGTATTTT+TGG | - | chr7.2:3659889-3659908 | None:intergenic | 30.0% |
| ! | TGATGATGACAATTATTGAG+TGG | - | chr7.2:3663080-3663099 | None:intergenic | 30.0% |
| ! | TTTTAGCCTCAGGTATATTA+AGG | - | chr7.2:3660410-3660429 | None:intergenic | 30.0% |
| !! | AGATTCAAGTTGTAATCACT+AGG | - | chr7.2:3661019-3661038 | None:intergenic | 30.0% |
| !! | ATCATTGATTTCTCCGATAA+TGG | - | chr7.2:3659919-3659938 | None:intergenic | 30.0% |
| !! | ATTGATTTGAAGTGAGATGA+AGG | - | chr7.2:3660501-3660520 | None:intergenic | 30.0% |
| !! | GTAAATAAATGGGCTTTTGA+GGG | + | chr7.2:3660806-3660825 | MS.gene29326:CDS | 30.0% |
| !! | GTATTTTTACAAAAAGGGGT+GGG | + | chr7.2:3662029-3662048 | MS.gene29326:intron | 30.0% |
| !! | TGTATTTTTACAAAAAGGGG+TGG | + | chr7.2:3662028-3662047 | MS.gene29326:intron | 30.0% |
| !! | TTCAATGACTAGTTTGATCT+TGG | + | chr7.2:3661436-3661455 | MS.gene29326:intron | 30.0% |
| !!! | ACAAATTTTGACTCTTTTGG+AGG | + | chr7.2:3663000-3663019 | MS.gene29326:intron | 30.0% |
| !!! | GTTGGTAATGAGCATTTTAA+GGG | - | chr7.2:3663158-3663177 | None:intergenic | 30.0% |
| !!! | TGTTGGTAATGAGCATTTTA+AGG | - | chr7.2:3663159-3663178 | None:intergenic | 30.0% |
| AAAAGTCTCATTGCAGAACT+TGG | - | chr7.2:3662709-3662728 | None:intergenic | 35.0% | |
| AACATAATCAGCTTCAAGTC+TGG | + | chr7.2:3663103-3663122 | MS.gene29326:CDS | 35.0% | |
| AAGAAATACACAGTAGTGTC+TGG | + | chr7.2:3662954-3662973 | MS.gene29326:intron | 35.0% | |
| ACCTGTTAGATCTGAAGAAA+AGG | + | chr7.2:3661900-3661919 | MS.gene29326:intron | 35.0% | |
| ACTAACTGTGTTGTCAATTC+CGG | - | chr7.2:3660858-3660877 | None:intergenic | 35.0% | |
| AGAAAAGGTTATGTCTTGAG+AGG | + | chr7.2:3661915-3661934 | MS.gene29326:intron | 35.0% | |
| AGTTGTAATCACTAGGAACA+AGG | - | chr7.2:3661012-3661031 | None:intergenic | 35.0% | |
| AGTTTGATCTTGGACAGATT+TGG | + | chr7.2:3661446-3661465 | MS.gene29326:intron | 35.0% | |
| ATCGTTGAGACTTGTGTTAA+AGG | + | chr7.2:3660251-3660270 | MS.gene29326:CDS | 35.0% | |
| ATGAGAAGATTAGAGGGAAA+AGG | - | chr7.2:3660162-3660181 | None:intergenic | 35.0% | |
| ATGTAAATGTGGAGATAGCA+TGG | - | chr7.2:3660960-3660979 | None:intergenic | 35.0% | |
| CACTCAACAGAACATGAATT+AGG | - | chr7.2:3660357-3660376 | None:intergenic | 35.0% | |
| GAATTAATAACCACAGTAGC+AGG | - | chr7.2:3660641-3660660 | None:intergenic | 35.0% | |
| GACAACACAGTTAGTTCATA+CGG | + | chr7.2:3660863-3660882 | MS.gene29326:CDS | 35.0% | |
| GAGACTTGTGTTAAAGGATA+CGG | + | chr7.2:3660257-3660276 | MS.gene29326:CDS | 35.0% | |
| GAGCTAATGGAAATGAATCA+AGG | + | chr7.2:3663361-3663380 | MS.gene29326:CDS | 35.0% | |
| GAGGGTGAAAAAATCATTCA+TGG | + | chr7.2:3660824-3660843 | MS.gene29326:CDS | 35.0% | |
| GCCAGATTACTAATGGTTAT+TGG | + | chr7.2:3662538-3662557 | MS.gene29326:intron | 35.0% | |
| GTATGATGCCAGATTACTAA+TGG | + | chr7.2:3662531-3662550 | MS.gene29326:intron | 35.0% | |
| TAAGTAGAAAGCGGTTAAAG+CGG | - | chr7.2:3661770-3661789 | None:intergenic | 35.0% | |
| TCGAAGAACAGTTTCTATTG+TGG | - | chr7.2:3663416-3663435 | None:intergenic | 35.0% | |
| TCTTGATTCTGTTGTCAATG+CGG | + | chr7.2:3661490-3661509 | MS.gene29326:intron | 35.0% | |
| TGATAAAGTGATTGCTGAAC+TGG | + | chr7.2:3663664-3663683 | MS.gene29326:CDS | 35.0% | |
| TGTTACTACGTTAGAAGAGA+AGG | + | chr7.2:3663333-3663352 | MS.gene29326:CDS | 35.0% | |
| TTGCATTTCAAATATTCGCG+CGG | + | chr7.2:3660547-3660566 | MS.gene29326:intron | 35.0% | |
| ! | ACCTTTTCTTCAGATCTAAC+AGG | - | chr7.2:3661904-3661923 | None:intergenic | 35.0% |
| ! | AGGTAGAAACACAAAAGCAT+TGG | + | chr7.2:3663186-3663205 | MS.gene29326:CDS | 35.0% |
| ! | CATACAGATCCCAAACTTTT+TGG | - | chr7.2:3662516-3662535 | None:intergenic | 35.0% |
| ! | TAGGGTTTGAGACTTTGATT+TGG | + | chr7.2:3662167-3662186 | MS.gene29326:intron | 35.0% |
| ! | TTTTGTCTCTTTTCTTGACG+AGG | + | chr7.2:3662725-3662744 | MS.gene29326:intron | 35.0% |
| !! | ATACGGCATTGGAATTTTCA+TGG | + | chr7.2:3660274-3660293 | MS.gene29326:CDS | 35.0% |
| !! | GGTAAATAAATGGGCTTTTG+AGG | + | chr7.2:3660805-3660824 | MS.gene29326:CDS | 35.0% |
| !! | GTTATTGGTTTGGATCACTA+AGG | + | chr7.2:3662553-3662572 | MS.gene29326:intron | 35.0% |
| !! | TAGAAACACAAAAGCATTGG+TGG | + | chr7.2:3663189-3663208 | MS.gene29326:CDS | 35.0% |
| !! | TGTTACTGATTCTGTTTCTG+TGG | + | chr7.2:3660733-3660752 | MS.gene29326:CDS | 35.0% |
| !!! | AAACGACATCGTATTTTTGG+TGG | - | chr7.2:3659886-3659905 | None:intergenic | 35.0% |
| AAAACATGCCTCCGTTTCTA+CGG | + | chr7.2:3662429-3662448 | MS.gene29326:intron | 40.0% | |
| AAAGGTTATGTCTTGAGAGG+CGG | + | chr7.2:3661918-3661937 | MS.gene29326:intron | 40.0% | |
| AATCAATGGAGGTTAAAGCC+AGG | + | chr7.2:3659997-3660016 | MS.gene29326:intron | 40.0% | |
| AGAGAAGGTAGAAGAGCTAA+TGG | + | chr7.2:3663348-3663367 | MS.gene29326:CDS | 40.0% | |
| AGCAGTAAACACAAAAGCCA+TGG | - | chr7.2:3663251-3663270 | None:intergenic | 40.0% | |
| AGGGGGATTAGAGAAATCTA+GGG | + | chr7.2:3662149-3662168 | MS.gene29326:intron | 40.0% | |
| AGTGAAGAGGACATACAAGT+TGG | - | chr7.2:3663511-3663530 | None:intergenic | 40.0% | |
| ATACTGATCGGTTGAGAGAA+GGG | + | chr7.2:3662061-3662080 | MS.gene29326:intron | 40.0% | |
| ATCAATGGAGGTTAAAGCCA+GGG | + | chr7.2:3659998-3660017 | MS.gene29326:intron | 40.0% | |
| ATCATTCATGGAAAGCCATC+CGG | + | chr7.2:3660836-3660855 | MS.gene29326:CDS | 40.0% | |
| ATTGCTGAACTGGAGTCAAA+CGG | + | chr7.2:3663674-3663693 | MS.gene29326:CDS | 40.0% | |
| ATTTCAAATATTCGCGCGGT+CGG | + | chr7.2:3660551-3660570 | MS.gene29326:intron | 40.0% | |
| CTGAAAATCCCAAAACCGAA+CGG | + | chr7.2:3661143-3661162 | MS.gene29326:intron | 40.0% | |
| CTGAGATGCGATTATCACTT+GGG | - | chr7.2:3661312-3661331 | None:intergenic | 40.0% | |
| GATCAAAGCATGTCAAGGAA+AGG | - | chr7.2:3663623-3663642 | None:intergenic | 40.0% | |
| GCGATGCTCAAAATCAGAAT+AGG | + | chr7.2:3662912-3662931 | MS.gene29326:intron | 40.0% | |
| GGTTGAGATATTCTCCTCTT+CGG | - | chr7.2:3661171-3661190 | None:intergenic | 40.0% | |
| TACTGAATGTGTGTTTGTGG+TGG | + | chr7.2:3662190-3662209 | MS.gene29326:intron | 40.0% | |
| TCAAGTCTGGTAACTTGACA+CGG | + | chr7.2:3663116-3663135 | MS.gene29326:CDS | 40.0% | |
| TGGAGAGAAGGAACTTGATT+TGG | + | chr7.2:3660784-3660803 | MS.gene29326:CDS | 40.0% | |
| TGTGTTAAAGGATACGGCAT+TGG | + | chr7.2:3660263-3660282 | MS.gene29326:CDS | 40.0% | |
| ! | GAATTGCACTGTGAGAGTAT+AGG | + | chr7.2:3661055-3661074 | MS.gene29326:intron | 40.0% |
| ! | GCTAAAATTGGACTTGCTTC+TGG | + | chr7.2:3660423-3660442 | MS.gene29326:CDS | 40.0% |
| ! | GTGTGTTTGTGGTGGAAATA+GGG | + | chr7.2:3662198-3662217 | MS.gene29326:intron | 40.0% |
| ! | TCTGAGATGCGATTATCACT+TGG | - | chr7.2:3661313-3661332 | None:intergenic | 40.0% |
| ! | TGGTACTGAATGTGTGTTTG+TGG | + | chr7.2:3662187-3662206 | MS.gene29326:intron | 40.0% |
| ! | TGTGTGTTTGTGGTGGAAAT+AGG | + | chr7.2:3662197-3662216 | MS.gene29326:intron | 40.0% |
| !! | TATTGAGTGGGTTGCACATT+CGG | - | chr7.2:3663067-3663086 | None:intergenic | 40.0% |
| !! | TTCTGATCTTCCTTTGGGAT+CGG | + | chr7.2:3660658-3660677 | MS.gene29326:CDS | 40.0% |
| !! | TTTTAAGTCCATATGCGGTC+AGG | + | chr7.2:3662290-3662309 | MS.gene29326:intron | 40.0% |
| AACACAAAAGCCATGGCATC+CGG | - | chr7.2:3663244-3663263 | None:intergenic | 45.0% | |
| AACACCATTCCCACCAATTC+CGG | - | chr7.2:3663717-3663736 | None:intergenic | 45.0% | |
| AACCAAATCCGTAGAAACGG+AGG | - | chr7.2:3662440-3662459 | None:intergenic | 45.0% | |
| AAGGTTATGTCTTGAGAGGC+GGG | + | chr7.2:3661919-3661938 | MS.gene29326:intron | 45.0% | |
| ACTGTGTTGTCAATTCCGGA+TGG | - | chr7.2:3660854-3660873 | None:intergenic | 45.0% | |
| AGAACTTGGCGAATTGGATG+AGG | - | chr7.2:3662695-3662714 | None:intergenic | 45.0% | |
| AGAGGGAAAAGGATTGAGTG+AGG | - | chr7.2:3660151-3660170 | None:intergenic | 45.0% | |
| ATTCGGAGGCAGTAACTAGT+GGG | - | chr7.2:3663050-3663069 | None:intergenic | 45.0% | |
| CAATGTTTCACTGCCGGAAT+TGG | + | chr7.2:3663701-3663720 | MS.gene29326:CDS | 45.0% | |
| CAATTCCGGCAGTGAAACAT+TGG | - | chr7.2:3663703-3663722 | None:intergenic | 45.0% | |
| CAGAAGAAGGAGTGGAAAAG+CGG | - | chr7.2:3660118-3660137 | None:intergenic | 45.0% | |
| CATTGCAGAACTTGGCGAAT+TGG | - | chr7.2:3662701-3662720 | None:intergenic | 45.0% | |
| CCCAACCAAATCCGTAGAAA+CGG | - | chr7.2:3662443-3662462 | None:intergenic | 45.0% | |
| CCCGGAAAAATCATCTTAGC+CGG | + | chr7.2:3660023-3660042 | MS.gene29326:CDS | 45.0% | |
| CCGGAAAAATCATCTTAGCC+GGG | + | chr7.2:3660024-3660043 | MS.gene29326:CDS | 45.0% | |
| CGGAAAAATCATCTTAGCCG+GGG | + | chr7.2:3660025-3660044 | MS.gene29326:CDS | 45.0% | |
| CTCATTACCAACACGAGAGT+AGG | + | chr7.2:3663166-3663185 | MS.gene29326:CDS | 45.0% | |
| CTCTAGATAGGGTACAGCTT+CGG | + | chr7.2:3661109-3661128 | MS.gene29326:intron | 45.0% | |
| CTGTGGATGTGATGCAACAA+GGG | + | chr7.2:3660750-3660769 | MS.gene29326:CDS | 45.0% | |
| GAAGACGACAATGAGTGAAG+AGG | - | chr7.2:3663524-3663543 | None:intergenic | 45.0% | |
| GAGGGAAAAGGATTGAGTGA+GGG | - | chr7.2:3660150-3660169 | None:intergenic | 45.0% | |
| GAGGGGGATTAGAGAAATCT+AGG | + | chr7.2:3662148-3662167 | MS.gene29326:intron | 45.0% | |
| GATACTGATCGGTTGAGAGA+AGG | + | chr7.2:3662060-3662079 | MS.gene29326:intron | 45.0% | |
| GTAGTAACAGAGAGCTCATC+CGG | - | chr7.2:3663322-3663341 | None:intergenic | 45.0% | |
| GTCAATAGAAGAAGCAACGG+CGG | - | chr7.2:3660075-3660094 | None:intergenic | 45.0% | |
| GTTTCTACCTACTCTCGTGT+TGG | - | chr7.2:3663176-3663195 | None:intergenic | 45.0% | |
| TAGATTCAAGCCTGCTACTG+TGG | + | chr7.2:3660628-3660647 | MS.gene29326:intron | 45.0% | |
| TCTGTGGATGTGATGCAACA+AGG | + | chr7.2:3660749-3660768 | MS.gene29326:CDS | 45.0% | |
| TTCAACTGTATGCACCTACC+TGG | + | chr7.2:3662350-3662369 | MS.gene29326:intron | 45.0% | |
| TTGCTGAACTGGAGTCAAAC+GGG | + | chr7.2:3663675-3663694 | MS.gene29326:CDS | 45.0% | |
| TTTCAAATATTCGCGCGGTC+GGG | + | chr7.2:3660552-3660571 | MS.gene29326:intron | 45.0% | |
| ! | CAACAAGGGTGGCATTCTTT+TGG | + | chr7.2:3660764-3660783 | MS.gene29326:CDS | 45.0% |
| ! | CCCGGCTAAGATGATTTTTC+CGG | - | chr7.2:3660027-3660046 | None:intergenic | 45.0% |
| ! | CCGGCTAAGATGATTTTTCC+GGG | - | chr7.2:3660026-3660045 | None:intergenic | 45.0% |
| ! | CCGTTTCTACGGATTTGGTT+GGG | + | chr7.2:3662440-3662459 | MS.gene29326:intron | 45.0% |
| ! | GCACTGATCAAAGCATGTCA+AGG | - | chr7.2:3663628-3663647 | None:intergenic | 45.0% |
| ! | GTGTTTCTGAGAGAATGCTG+AGG | + | chr7.2:3663215-3663234 | MS.gene29326:CDS | 45.0% |
| ! | GTTGACCACATCTAGAGTCA+GGG | - | chr7.2:3662481-3662500 | None:intergenic | 45.0% |
| ! | TCCGTTTCTACGGATTTGGT+TGG | + | chr7.2:3662439-3662458 | MS.gene29326:intron | 45.0% |
| ! | TCTTCTAAGTTGACAGGAGC+TGG | + | chr7.2:3663457-3663476 | MS.gene29326:CDS | 45.0% |
| ! | TTCGGTTGAGCAGTTTTGCT+CGG | + | chr7.2:3661235-3661254 | MS.gene29326:intron | 45.0% |
| ! | TTGAGATGAGAGCACGAAGA+GGG | + | chr7.2:3662130-3662149 | MS.gene29326:intron | 45.0% |
| ! | TTTGAGATGAGAGCACGAAG+AGG | + | chr7.2:3662129-3662148 | MS.gene29326:intron | 45.0% |
| !! | AACACAAAAGCATTGGTGGC+TGG | + | chr7.2:3663193-3663212 | MS.gene29326:CDS | 45.0% |
| !! | GCAAGTCCAATTTTAGCCTC+AGG | - | chr7.2:3660420-3660439 | None:intergenic | 45.0% |
| !! | GTGGCATTCTTTTGGAGAGA+AGG | + | chr7.2:3660772-3660791 | MS.gene29326:CDS | 45.0% |
| !! | TCTGATCTTCCTTTGGGATC+GGG | + | chr7.2:3660659-3660678 | MS.gene29326:CDS | 45.0% |
| AAAACCGAACGGAACCGAAG+AGG | + | chr7.2:3661154-3661173 | MS.gene29326:intron | 50.0% | |
| AAGGTCTGCTCCAGAGTATG+GGG | + | chr7.2:3663380-3663399 | MS.gene29326:CDS | 50.0% | |
| AATCCGATGCTACAGACGGT+CGG | - | chr7.2:3661198-3661217 | None:intergenic | 50.0% | |
| ACACAAAAGCCATGGCATCC+GGG | - | chr7.2:3663243-3663262 | None:intergenic | 50.0% | |
| AGATAGGGTACAGCTTCGGT+CGG | + | chr7.2:3661113-3661132 | MS.gene29326:intron | 50.0% | |
| AGTCCATATGCGGTCAGGTT+CGG | + | chr7.2:3662295-3662314 | MS.gene29326:intron | 50.0% | |
| ATTCTGTTGTCAATGCGGCG+CGG | + | chr7.2:3661495-3661514 | MS.gene29326:intron | 50.0% | |
| CAAGGTCTGCTCCAGAGTAT+GGG | + | chr7.2:3663379-3663398 | MS.gene29326:CDS | 50.0% | |
| CATTCGGAGGCAGTAACTAG+TGG | - | chr7.2:3663051-3663070 | None:intergenic | 50.0% | |
| CTCAACCGATCAGTATCGCA+TGG | - | chr7.2:3662057-3662076 | None:intergenic | 50.0% | |
| GACCAATCCGATGCTACAGA+CGG | - | chr7.2:3661202-3661221 | None:intergenic | 50.0% | |
| GAGAAGGGATGACAGAGTAG+AGG | + | chr7.2:3662076-3662095 | MS.gene29326:intron | 50.0% | |
| GCGCGTGCATAAGTAGAAAG+CGG | - | chr7.2:3661779-3661798 | None:intergenic | 50.0% | |
| GGAAAAGCGGAGAGAAACGT+AGG | - | chr7.2:3660105-3660124 | None:intergenic | 50.0% | |
| GGCCAACCCAAAAATTAGCG+CGG | + | chr7.2:3661521-3661540 | MS.gene29326:intron | 50.0% | |
| GGCGGGTGATGAAACAGAAT+CGG | + | chr7.2:3661936-3661955 | MS.gene29326:intron | 50.0% | |
| GGGTTCCAATGTTTCACTGC+CGG | + | chr7.2:3663695-3663714 | MS.gene29326:CDS | 50.0% | |
| GTTTCACTGCCGGAATTGGT+GGG | + | chr7.2:3663705-3663724 | MS.gene29326:CDS | 50.0% | |
| TCAAGGTCTGCTCCAGAGTA+TGG | + | chr7.2:3663378-3663397 | MS.gene29326:CDS | 50.0% | |
| TGCCTCCGTTTCTACGGATT+TGG | + | chr7.2:3662435-3662454 | MS.gene29326:intron | 50.0% | |
| TGGATGTGATGCAACAAGGG+TGG | + | chr7.2:3660753-3660772 | MS.gene29326:CDS | 50.0% | |
| TGTTTCACTGCCGGAATTGG+TGG | + | chr7.2:3663704-3663723 | MS.gene29326:CDS | 50.0% | |
| TTCTCCTCTTCGGTTCCGTT+CGG | - | chr7.2:3661161-3661180 | None:intergenic | 50.0% | |
| ! | CAGAGCGTAGCGGAAAAATC+AGG | - | chr7.2:3661824-3661843 | None:intergenic | 50.0% |
| ! | CGCTTTTCCACTCCTTCTTC+TGG | + | chr7.2:3660116-3660135 | MS.gene29326:CDS | 50.0% |
| ! | CTTCGGTTCCGTTCGGTTTT+GGG | - | chr7.2:3661154-3661173 | None:intergenic | 50.0% |
| ! | GAGCAGTTTTGCTCGGTTGA+AGG | + | chr7.2:3661242-3661261 | MS.gene29326:intron | 50.0% |
| ! | GGTTGACCACATCTAGAGTC+AGG | - | chr7.2:3662482-3662501 | None:intergenic | 50.0% |
| ! | TCTAAGTTGACAGGAGCTGG+TGG | + | chr7.2:3663460-3663479 | MS.gene29326:CDS | 50.0% |
| ! | TCTACGGATTTGGTTGGGTC+CGG | + | chr7.2:3662445-3662464 | MS.gene29326:intron | 50.0% |
| ! | TCTTCGGTTCCGTTCGGTTT+TGG | - | chr7.2:3661155-3661174 | None:intergenic | 50.0% |
| ! | TGAGATGAGAGCACGAAGAG+GGG | + | chr7.2:3662131-3662150 | MS.gene29326:intron | 50.0% |
| !! | AGGGAGAGAGTACCAGAAGA+AGG | - | chr7.2:3660131-3660150 | None:intergenic | 50.0% |
| !! | CTTCCTTTGGGATCGGGTTT+GGG | + | chr7.2:3660665-3660684 | MS.gene29326:CDS | 50.0% |
| !! | GAGAGTACCAGAAGAAGGAG+TGG | - | chr7.2:3660126-3660145 | None:intergenic | 50.0% |
| !! | GTCTGTAGCATCGGATTGGT+CGG | + | chr7.2:3661201-3661220 | MS.gene29326:intron | 50.0% |
| !! | TCTGTAGCATCGGATTGGTC+GGG | + | chr7.2:3661202-3661221 | MS.gene29326:intron | 50.0% |
| !! | TCTTCCTTTGGGATCGGGTT+TGG | + | chr7.2:3660664-3660683 | MS.gene29326:CDS | 50.0% |
| !!! | CTGGTGTTGCCGCTTTTCTT+TGG | + | chr7.2:3660442-3660461 | MS.gene29326:CDS | 50.0% |
| AAGTTGACAGGAGCTGGTGG+TGG | + | chr7.2:3663463-3663482 | MS.gene29326:CDS | 55.0% | |
| ACAGAGAGCTCATCCGGTGT+AGG | - | chr7.2:3663316-3663335 | None:intergenic | 55.0% | |
| ACCCAAAAATTAGCGCGGCG+CGG | + | chr7.2:3661526-3661545 | MS.gene29326:intron | 55.0% | |
| ACTGCCGGAATTGGTGGGAA+TGG | + | chr7.2:3663710-3663729 | MS.gene29326:CDS | 55.0% | |
| AGGTCTGCTCCAGAGTATGG+GGG | + | chr7.2:3663381-3663400 | MS.gene29326:CDS | 55.0% | |
| AGGTGAGCATAGTCAGGTCC+AGG | - | chr7.2:3662371-3662390 | None:intergenic | 55.0% | |
| AGTTGACAGGAGCTGGTGGT+GGG | + | chr7.2:3663464-3663483 | MS.gene29326:CDS | 55.0% | |
| ATCCGATGCTACAGACGGTC+GGG | - | chr7.2:3661197-3661216 | None:intergenic | 55.0% | |
| ATGCTACAGACGGTCGGGAA+TGG | - | chr7.2:3661192-3661211 | None:intergenic | 55.0% | |
| CATGACTGACCCCCATACTC+TGG | - | chr7.2:3663393-3663412 | None:intergenic | 55.0% | |
| CGGTGTAGGTGACTGGAGAA+CGG | - | chr7.2:3663302-3663321 | None:intergenic | 55.0% | |
| CGTTCTCCAGTCACCTACAC+CGG | + | chr7.2:3663300-3663319 | MS.gene29326:CDS | 55.0% | |
| CTCAGCCCTGACTCTAGATG+TGG | + | chr7.2:3662473-3662492 | MS.gene29326:intron | 55.0% | |
| CTGGGTGGAGACGATTTGAG+CGG | - | chr7.2:3662400-3662419 | None:intergenic | 55.0% | |
| GAACCCAAACCCGATCCCAA+AGG | - | chr7.2:3660671-3660690 | None:intergenic | 55.0% | |
| GACCTGACTATGCTCACCTG+AGG | + | chr7.2:3662372-3662391 | MS.gene29326:intron | 55.0% | |
| GAGCATAGTCAGGTCCAGGT+AGG | - | chr7.2:3662367-3662386 | None:intergenic | 55.0% | |
| GGCGGTTGATCCGTGAACAA+CGG | - | chr7.2:3660057-3660076 | None:intergenic | 55.0% | |
| GTCCTCAGGTGAGCATAGTC+AGG | - | chr7.2:3662377-3662396 | None:intergenic | 55.0% | |
| TACTTATGCACGCGCCAACG+CGG | + | chr7.2:3661784-3661803 | MS.gene29326:intron | 55.0% | |
| TCCGCTACGCTCTGCTATAG+CGG | + | chr7.2:3661830-3661849 | MS.gene29326:intron | 55.0% | |
| TGACCGAACCTGACCGCATA+TGG | - | chr7.2:3662301-3662320 | None:intergenic | 55.0% | |
| TGGGTGGAGACGATTTGAGC+GGG | - | chr7.2:3662399-3662418 | None:intergenic | 55.0% | |
| TTCATCCGCGGCATTCTGTG+TGG | + | chr7.2:3660688-3660707 | MS.gene29326:CDS | 55.0% | |
| TTCCCGACCGTCTGTAGCAT+CGG | + | chr7.2:3661192-3661211 | MS.gene29326:intron | 55.0% | |
| ! | ATCGGGTTTGGGTTCATCCG+CGG | + | chr7.2:3660676-3660695 | MS.gene29326:CDS | 55.0% |
| ! | GACCGTCTGTAGCATCGGAT+TGG | + | chr7.2:3661197-3661216 | MS.gene29326:intron | 55.0% |
| ! | GAGATGAGAGCACGAAGAGG+GGG | + | chr7.2:3662132-3662151 | MS.gene29326:intron | 55.0% |
| ! | GATGATTTTTCCGGGAGCCC+TGG | - | chr7.2:3660018-3660037 | None:intergenic | 55.0% |
| ! | GGGTGCCATGCGATACTGAT+CGG | + | chr7.2:3662049-3662068 | MS.gene29326:intron | 55.0% |
| ! | GGTACAGCTTCGGTCGGTTT+CGG | + | chr7.2:3661119-3661138 | MS.gene29326:intron | 55.0% |
| ! | GTACAGCTTCGGTCGGTTTC+GGG | + | chr7.2:3661120-3661139 | MS.gene29326:intron | 55.0% |
| ! | TGAGAGAATGCTGAGGCACC+CGG | + | chr7.2:3663222-3663241 | MS.gene29326:CDS | 55.0% |
| !! | CGGAGGCATGTTTTGAGCCA+CGG | - | chr7.2:3662423-3662442 | None:intergenic | 55.0% |
| !! | GCATGTTTTGAGCCACGGCT+GGG | - | chr7.2:3662418-3662437 | None:intergenic | 55.0% |
| !! | TGAGTGGGTTGCACATTCGG+AGG | - | chr7.2:3663064-3663083 | None:intergenic | 55.0% |
| !! | TTGCGTAGCGGGCGCTATTT+CGG | + | chr7.2:3661556-3661575 | MS.gene29326:intron | 55.0% |
| !!! | CGCCGCGCTAATTTTTGGGT+TGG | - | chr7.2:3661526-3661545 | None:intergenic | 55.0% |
| AAAATCAGGACCACCGCGCC+AGG | - | chr7.2:3661810-3661829 | None:intergenic | 60.0% | |
| AAATCGTCTCCACCCAGCCG+TGG | + | chr7.2:3662403-3662422 | MS.gene29326:intron | 60.0% | |
| CAGTGCCACACAGAATGCCG+CGG | - | chr7.2:3660696-3660715 | None:intergenic | 60.0% | |
| CCCAAAAATTAGCGCGGCGC+GGG | + | chr7.2:3661527-3661546 | MS.gene29326:intron | 60.0% | |
| GACGATTTGAGCGGGTCCTC+AGG | - | chr7.2:3662391-3662410 | None:intergenic | 60.0% | |
| GAGGTTAAAGCCAGGGCTCC+CGG | + | chr7.2:3660005-3660024 | MS.gene29326:intron | 60.0% | |
| GAGTCAGGGCTGAGCACAAC+CGG | - | chr7.2:3662467-3662486 | None:intergenic | 60.0% | |
| GCCGCTATAGCAGAGCGTAG+CGG | - | chr7.2:3661834-3661853 | None:intergenic | 60.0% | |
| GCTACGCTCTGCTATAGCGG+CGG | + | chr7.2:3661833-3661852 | MS.gene29326:intron | 60.0% | |
| GCTCATCCGGTGTAGGTGAC+TGG | - | chr7.2:3663309-3663328 | None:intergenic | 60.0% | |
| GGGGAACACGCCGTTGTTCA+CGG | + | chr7.2:3660044-3660063 | MS.gene29326:CDS | 60.0% | |
| GTGAACAACGGCGTGTTCCC+CGG | - | chr7.2:3660045-3660064 | None:intergenic | 60.0% | |
| GTTGTCAAAAGCGGCCGCAC+CGG | - | chr7.2:3661859-3661878 | None:intergenic | 60.0% | |
| ! | CCCGCGCCGCGCTAATTTTT+GGG | - | chr7.2:3661530-3661549 | None:intergenic | 60.0% |
| ! | GGCATTCTGTGTGGCACTGG+CGG | + | chr7.2:3660697-3660716 | MS.gene29326:CDS | 60.0% |
| ! | GTTGACAGGAGCTGGTGGTG+GGG | + | chr7.2:3663465-3663484 | MS.gene29326:CDS | 60.0% |
| ! | TCCCGCGCCGCGCTAATTTT+TGG | - | chr7.2:3661531-3661550 | None:intergenic | 60.0% |
| ! | TGGTCGGGTGGCGGTTTGTT+CGG | + | chr7.2:3661217-3661236 | MS.gene29326:intron | 60.0% |
| !! | GGCATGTTTTGAGCCACGGC+TGG | - | chr7.2:3662419-3662438 | None:intergenic | 60.0% |
| !! | GTAGCATCGGATTGGTCGGG+TGG | + | chr7.2:3661205-3661224 | MS.gene29326:intron | 60.0% |
| !! | TGTTTTGAGCCACGGCTGGG+TGG | - | chr7.2:3662415-3662434 | None:intergenic | 60.0% |
| !! | TTGACAGGAGCTGGTGGTGG+GGG | + | chr7.2:3663466-3663485 | MS.gene29326:CDS | 60.0% |
| AAATTAGCGCGGCGCGGGAG+TGG | + | chr7.2:3661532-3661551 | MS.gene29326:intron | 65.0% | |
| AATTAGCGCGGCGCGGGAGT+GGG | + | chr7.2:3661533-3661552 | MS.gene29326:intron | 65.0% | |
| CGCGGCATTCTGTGTGGCAC+TGG | + | chr7.2:3660694-3660713 | MS.gene29326:CDS | 65.0% | |
| GTTGTCAATGCGGCGCGGAG+CGG | + | chr7.2:3661500-3661519 | MS.gene29326:intron | 65.0% | |
| ! | CGGGCGCTATTTCGGTGGTG+TGG | + | chr7.2:3661564-3661583 | MS.gene29326:intron | 65.0% |
| ! | GCGGTCAGGTTCGGTCAGTG+CGG | + | chr7.2:3662304-3662323 | MS.gene29326:intron | 65.0% |
| !! | CGTAGCGGGCGCTATTTCGG+TGG | + | chr7.2:3661559-3661578 | MS.gene29326:intron | 65.0% |
| !! | GCATCGGATTGGTCGGGTGG+CGG | + | chr7.2:3661208-3661227 | MS.gene29326:intron | 65.0% |
| CGCTCTGCTATAGCGGCGGC+CGG | + | chr7.2:3661837-3661856 | MS.gene29326:intron | 70.0% | |
| TGCTATAGCGGCGGCCGGTG+CGG | + | chr7.2:3661842-3661861 | MS.gene29326:intron | 70.0% | |
| ! | GCTGAGGCACCCGGATGCCA+TGG | + | chr7.2:3663231-3663250 | MS.gene29326:CDS | 70.0% |
| !! | CGCGGGAGTGGGTTGCGTAG+CGG | + | chr7.2:3661544-3661563 | MS.gene29326:intron | 70.0% |
| !! | GCGGGAGTGGGTTGCGTAGC+GGG | + | chr7.2:3661545-3661564 | MS.gene29326:intron | 70.0% |
| ATGCACGCGCCAACGCGGCC+TGG | + | chr7.2:3661789-3661808 | MS.gene29326:intron | 75.0% | |
| ! | ACCACCGCGCCAGGCCGCGT+TGG | - | chr7.2:3661801-3661820 | None:intergenic | 80.0% |
| ! | CGCGCCAACGCGGCCTGGCG+CGG | + | chr7.2:3661794-3661813 | MS.gene29326:intron | 85.0% |
| ! | GCCAACGCGGCCTGGCGCGG+TGG | + | chr7.2:3661797-3661816 | MS.gene29326:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 3659848 | 3663763 | 3659848 | ID=MS.gene29326 |
| chr7.2 | mRNA | 3659848 | 3663763 | 3659848 | ID=MS.gene29326.t1;Parent=MS.gene29326 |
| chr7.2 | exon | 3659848 | 3659861 | 3659848 | ID=MS.gene29326.t1.exon1;Parent=MS.gene29326.t1 |
| chr7.2 | CDS | 3659848 | 3659861 | 3659848 | ID=cds.MS.gene29326.t1;Parent=MS.gene29326.t1 |
| chr7.2 | exon | 3660019 | 3660137 | 3660019 | ID=MS.gene29326.t1.exon2;Parent=MS.gene29326.t1 |
| chr7.2 | CDS | 3660019 | 3660137 | 3660019 | ID=cds.MS.gene29326.t1;Parent=MS.gene29326.t1 |
| chr7.2 | exon | 3660241 | 3660484 | 3660241 | ID=MS.gene29326.t1.exon3;Parent=MS.gene29326.t1 |
| chr7.2 | CDS | 3660241 | 3660484 | 3660241 | ID=cds.MS.gene29326.t1;Parent=MS.gene29326.t1 |
| chr7.2 | exon | 3660631 | 3660884 | 3660631 | ID=MS.gene29326.t1.exon4;Parent=MS.gene29326.t1 |
| chr7.2 | CDS | 3660631 | 3660884 | 3660631 | ID=cds.MS.gene29326.t1;Parent=MS.gene29326.t1 |
| chr7.2 | exon | 3663101 | 3663514 | 3663101 | ID=MS.gene29326.t1.exon5;Parent=MS.gene29326.t1 |
| chr7.2 | CDS | 3663101 | 3663514 | 3663101 | ID=cds.MS.gene29326.t1;Parent=MS.gene29326.t1 |
| chr7.2 | exon | 3663645 | 3663763 | 3663645 | ID=MS.gene29326.t1.exon6;Parent=MS.gene29326.t1 |
| chr7.2 | CDS | 3663645 | 3663763 | 3663645 | ID=cds.MS.gene29326.t1;Parent=MS.gene29326.t1 |
| Gene Sequence |
| Protein sequence |
